Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700370 | XP_013446562.1 | 98.844 | 173 | 2 | 0 | 25 | 197 | 1 | 173 | 3.09e-124 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700370 | sp|Q93VI3|RL171_ARATH | 87.861 | 173 | 21 | 0 | 25 | 197 | 1 | 173 | 4.79e-113 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700370 | I3SHA1 | 98.844 | 173 | 2 | 0 | 25 | 197 | 1 | 173 | 1.47e-124 | 358 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003030 | Msa0700370 | 0.861542 | 9.538811e-64 | -8.615850e-47 |
| Msa0020870 | Msa0700370 | 0.832886 | 7.316272e-56 | -8.615850e-47 |
| Msa0026270 | Msa0700370 | 0.807685 | 4.480438e-50 | -8.615850e-47 |
| Msa0042510 | Msa0700370 | 0.908202 | 2.211870e-81 | -8.615850e-47 |
| Msa0065330 | Msa0700370 | 0.800401 | 1.466254e-48 | -8.615850e-47 |
| Msa0079560 | Msa0700370 | 0.904435 | 1.231238e-79 | -8.615850e-47 |
| Msa0094210 | Msa0700370 | 0.816629 | 5.010296e-52 | -8.615850e-47 |
| Msa0609120 | Msa0700370 | 0.815866 | 7.421792e-52 | -8.615850e-47 |
| Msa0619230 | Msa0700370 | 0.867015 | 1.867874e-65 | -8.615850e-47 |
| Msa0621190 | Msa0700370 | 0.920322 | 1.482419e-87 | -8.615850e-47 |
| Msa0656450 | Msa0700370 | 0.931648 | 2.767326e-94 | -8.615850e-47 |
| Msa0691760 | Msa0700370 | 0.886056 | 4.767075e-72 | -8.615850e-47 |
| Msa0700370 | Msa0788960 | 0.800132 | 1.663646e-48 | -8.615850e-47 |
| Msa0700370 | Msa0834220 | 0.805945 | 1.044503e-49 | -8.615850e-47 |
| Msa0700370 | Msa0930360 | 0.907843 | 3.268211e-81 | -8.615850e-47 |
| Msa0700370 | Msa0930790 | 0.843078 | 1.747909e-58 | -8.615850e-47 |
| Msa0700370 | Msa0987570 | 0.852767 | 3.719246e-61 | -8.615850e-47 |
| Msa0700370 | Msa0998890 | 0.883048 | 6.236918e-71 | -8.615850e-47 |
| Msa0700370 | Msa1026850 | 0.818812 | 1.612268e-52 | -8.615850e-47 |
| Msa0700370 | Msa1052810 | 0.813160 | 2.946585e-51 | -8.615850e-47 |
| Msa0700370 | Msa1082050 | 0.855707 | 5.267662e-62 | -8.615850e-47 |
| Msa0700370 | Msa1111820 | 0.814986 | 1.165092e-51 | -8.615850e-47 |
| Msa0700370 | Msa1124980 | 0.820176 | 7.876348e-53 | -8.615850e-47 |
| Msa0700370 | Msa1144630 | 0.913061 | 9.516909e-84 | -8.615850e-47 |
| Msa0700370 | Msa1165700 | 0.916731 | 1.251283e-85 | -8.615850e-47 |
| Msa0700370 | Msa1209560 | -0.839864 | 1.227463e-57 | -8.615850e-47 |
| Msa0700370 | Msa1227350 | 0.840812 | 6.938930e-58 | -8.615850e-47 |
| Msa0700370 | Msa1235950 | 0.835000 | 2.164673e-56 | -8.615850e-47 |
| Msa0700370 | Msa1235980 | 0.841227 | 5.401224e-58 | -8.615850e-47 |
| Msa0700370 | Msa1237040 | 0.820897 | 5.379432e-53 | -8.615850e-47 |
| Msa0700370 | Msa1245270 | 0.813597 | 2.362058e-51 | -8.615850e-47 |
| Msa0700370 | Msa1246040 | -0.821087 | 4.863991e-53 | -8.615850e-47 |
| Msa0700370 | Msa1284800 | 0.899813 | 1.366583e-77 | -8.615850e-47 |
| Msa0700370 | Msa1298910 | -0.811958 | 5.396587e-51 | -8.615850e-47 |
| Msa0700370 | Msa1316100 | 0.809894 | 1.510093e-50 | -8.615850e-47 |
| Msa0700370 | Msa1317390 | 0.868388 | 6.776415e-66 | -8.615850e-47 |
| Msa0700370 | Msa1329930 | 0.811056 | 8.471659e-51 | -8.615850e-47 |
| Msa0700370 | Msa1330530 | -0.818086 | 2.354568e-52 | -8.615850e-47 |
| Msa0700370 | Msa1363930 | 0.913037 | 9.783326e-84 | -8.615850e-47 |
| Msa0700370 | Msa1366540 | 0.880441 | 5.475520e-70 | -8.615850e-47 |
| Msa0700370 | Msa1387750 | 0.931775 | 2.291188e-94 | -8.615850e-47 |
| Msa0700370 | Msa1390760 | 0.867595 | 1.219310e-65 | -8.615850e-47 |
| Msa0700370 | Msa1403520 | 0.806326 | 8.686466e-50 | -8.615850e-47 |
| Msa0700370 | Msa1407550 | 0.878649 | 2.367607e-69 | -8.615850e-47 |
| Msa0700370 | Msa1413570 | 0.927009 | 2.131601e-91 | -8.615850e-47 |
| Msa0700370 | Msa1432310 | 0.842841 | 2.020857e-58 | -8.615850e-47 |
| Msa0700370 | Msa1446510 | 0.828452 | 8.920931e-55 | -8.615850e-47 |
| Msa0700370 | Msa1463510 | 0.873350 | 1.573737e-67 | -8.615850e-47 |
| Msa0700370 | Msa1465700 | 0.845745 | 3.351805e-59 | -8.615850e-47 |
| Msa0700370 | Msa1465890 | 0.889565 | 2.162644e-73 | -8.615850e-47 |
| Msa0127230 | Msa0700370 | 0.902482 | 9.272330e-79 | -8.615850e-47 |
| Msa0128320 | Msa0700370 | 0.819983 | 8.718400e-53 | -8.615850e-47 |
| Msa0146910 | Msa0700370 | 0.861286 | 1.141523e-63 | -8.615850e-47 |
| Msa0168320 | Msa0700370 | 0.850766 | 1.373532e-60 | -8.615850e-47 |
| Msa0182100 | Msa0700370 | 0.820393 | 7.025415e-53 | -8.615850e-47 |
| Msa0188740 | Msa0700370 | 0.813551 | 2.416934e-51 | -8.615850e-47 |
| Msa0192300 | Msa0700370 | 0.843045 | 1.783365e-58 | -8.615850e-47 |
| Msa0233550 | Msa0700370 | 0.845859 | 3.122485e-59 | -8.615850e-47 |
| Msa0371490 | Msa0700370 | 0.822801 | 1.950610e-53 | -8.615850e-47 |
| Msa0373350 | Msa0700370 | 0.860422 | 2.088764e-63 | -8.615850e-47 |
| Msa0376850 | Msa0700370 | 0.832148 | 1.114944e-55 | -8.615850e-47 |
| Msa0377610 | Msa0700370 | 0.874713 | 5.446342e-68 | -8.615850e-47 |
| Msa0382670 | Msa0700370 | 0.847859 | 8.857595e-60 | -8.615850e-47 |
| Msa0387290 | Msa0700370 | 0.881908 | 1.622507e-70 | -8.615850e-47 |
| Msa0388520 | Msa0700370 | 0.859079 | 5.298727e-63 | -8.615850e-47 |
| Msa0388540 | Msa0700370 | 0.867862 | 1.001039e-65 | -8.615850e-47 |
| Msa0416470 | Msa0700370 | 0.843662 | 1.220508e-58 | -8.615850e-47 |
| Msa0421920 | Msa0700370 | 0.857383 | 1.694653e-62 | -8.615850e-47 |
| Msa0426820 | Msa0700370 | 0.862539 | 4.717549e-64 | -8.615850e-47 |
| Msa0426940 | Msa0700370 | 0.812257 | 4.644551e-51 | -8.615850e-47 |
| Msa0467740 | Msa0700370 | 0.911338 | 6.809093e-83 | -8.615850e-47 |
| Msa0477670 | Msa0700370 | 0.858603 | 7.354023e-63 | -8.615850e-47 |
| Msa0256350 | Msa0700370 | 0.846981 | 1.543295e-59 | -8.615850e-47 |
| Msa0270160 | Msa0700370 | 0.802586 | 5.228468e-49 | -8.615850e-47 |
| Msa0301250 | Msa0700370 | 0.857339 | 1.746277e-62 | -8.615850e-47 |
| Msa0304270 | Msa0700370 | 0.807474 | 4.965591e-50 | -8.615850e-47 |
| Msa0313060 | Msa0700370 | 0.811301 | 7.498661e-51 | -8.615850e-47 |
| Msa0485220 | Msa0700370 | 0.810657 | 1.033667e-50 | -8.615850e-47 |
| Msa0511760 | Msa0700370 | 0.836879 | 7.224287e-57 | -8.615850e-47 |
| Msa0514130 | Msa0700370 | 0.901189 | 3.444316e-78 | -8.615850e-47 |
| Msa0516830 | Msa0700370 | 0.832108 | 1.140823e-55 | -8.615850e-47 |
| Msa0574780 | Msa0700370 | 0.857571 | 1.491254e-62 | -8.615850e-47 |
| Msa0578010 | Msa0700370 | 0.902500 | 9.094897e-79 | -8.615850e-47 |
| Msa0597240 | Msa0700370 | 0.801390 | 9.210405e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700370 | MtrunA17_Chr8g0377301 | 98.844 | 173 | 2 | 0 | 25 | 197 | 1 | 173 | 2.84e-128 | 358 |
| Msa0700370 | MtrunA17_Chr3g0122641 | 95.954 | 173 | 7 | 0 | 25 | 197 | 1 | 173 | 5.03e-126 | 352 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700370 | AT1G27400.1 | 87.861 | 173 | 21 | 0 | 25 | 197 | 1 | 173 | 4.87e-114 | 322 |
| Msa0700370 | AT1G67430.1 | 87.283 | 173 | 22 | 0 | 25 | 197 | 1 | 173 | 1.12e-113 | 321 |
| Msa0700370 | AT1G67430.2 | 64.162 | 173 | 18 | 1 | 25 | 197 | 1 | 129 | 6.10e-71 | 211 |
Find 66 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATTAGAGTGTCTATTCT+TGG | 0.210303 | 4_4:+71339190 | None:intergenic |
| TCTTCTTGCTTGCTGCCAAC+TGG | 0.224595 | 4_4:+71338618 | None:intergenic |
| TTACACTTGGTAGGGTTATC+AGG | 0.253880 | 4_4:+71342483 | None:intergenic |
| ATCATTAAATAGATATTTCT+TGG | 0.256668 | 4_4:-71338382 | Msa0700370:three_prime_UTR |
| TATTGCTGCCTTGTACTCTT+AGG | 0.257568 | 4_4:-71338573 | Msa0700370:three_prime_UTR |
| GCCCTCTATCGTTTATTTGC+AGG | 0.259687 | 4_4:-71342656 | Msa0700370:CDS |
| TGCCCTTGACCAAGGCTAAA+AGG | 0.311470 | 4_4:-71339292 | Msa0700370:CDS |
| TATAAAATAGAACATAGTTT+TGG | 0.317872 | 4_4:+71338498 | None:intergenic |
| TAGAGTGTCTATTCTTGGCC+TGG | 0.328430 | 4_4:+71339195 | None:intergenic |
| ACCATGACGACGGCGTTTGA+TGG | 0.349011 | 4_4:+71342631 | None:intergenic |
| GACGTTTCTGTCGTGGTGTT+GGG | 0.366723 | 4_4:-71339226 | Msa0700370:CDS |
| TACTTTCTAGGTCAAAGGTT+TGG | 0.377018 | 4_4:-71339008 | Msa0700370:intron |
| CTTCTTGCTTGCTGCCAACT+GGG | 0.392921 | 4_4:+71338619 | None:intergenic |
| CTTGCTGCCAACTGGGACTC+CGG | 0.394551 | 4_4:+71338626 | None:intergenic |
| GCTTCTGTGCTTGATTGACT+TGG | 0.407265 | 4_4:+71338957 | None:intergenic |
| AGAGTGTCTATTCTTGGCCT+GGG | 0.411697 | 4_4:+71339196 | None:intergenic |
| AGACGTTTCTGTCGTGGTGT+TGG | 0.422500 | 4_4:-71339227 | Msa0700370:CDS |
| GGGAAACTGCCTTTGCCATC+AGG | 0.434248 | 4_4:-71339319 | Msa0700370:CDS |
| CAAGTCAGCGAAGTTTATCC+TGG | 0.440074 | 4_4:-71339150 | Msa0700370:CDS |
| AGACGTTCTTGCACACAAAC+AGG | 0.445626 | 4_4:-71339261 | Msa0700370:CDS |
| ATAAACTTCGCTGACTTGAC+TGG | 0.446611 | 4_4:+71339155 | None:intergenic |
| GAGGTCAGCACCACGAGCCT+TGG | 0.456110 | 4_4:+71342354 | None:intergenic |
| GTCAGCACCACGAGCCTTGG+TGG | 0.461811 | 4_4:+71342357 | None:intergenic |
| TGGTGTTGGGAGGACAGCCC+AGG | 0.463667 | 4_4:-71339213 | Msa0700370:CDS |
| GCCAAGAATAGACACTCTAA+TGG | 0.473513 | 4_4:-71339191 | Msa0700370:CDS |
| AATTGTACTTGCAGAACACT+AGG | 0.474152 | 4_4:-71339340 | Msa0700370:intron |
| AAGAAGAGGGCTTAAACTCT+AGG | 0.479337 | 4_4:-71338602 | Msa0700370:exon |
| CCATTCAGACGTTTCTGTCG+TGG | 0.491424 | 4_4:-71339233 | Msa0700370:CDS |
| TGACCTCAGAGTTCATTTCA+AGG | 0.493325 | 4_4:-71342338 | Msa0700370:intron |
| CCACGACAGAAACGTCTGAA+TGG | 0.493513 | 4_4:+71339233 | None:intergenic |
| ATTACTACTTTCTAGGTCAA+AGG | 0.496618 | 4_4:-71339013 | Msa0700370:intron |
| TCCATCAAACGCCGTCGTCA+TGG | 0.500893 | 4_4:-71342632 | Msa0700370:intron |
| GACCAAGGCTAAAAGGTACT+TGG | 0.501746 | 4_4:-71339285 | Msa0700370:CDS |
| AGAAGTTGCTTACACTTGGT+AGG | 0.508381 | 4_4:+71342474 | None:intergenic |
| AACGATAGAGGGCTGAGAGC+AGG | 0.508536 | 4_4:+71342666 | None:intergenic |
| AACCTGCAAATAAACGATAG+AGG | 0.523015 | 4_4:+71342654 | None:intergenic |
| ACATACGGTTGATTCTTCCA+TGG | 0.528331 | 4_4:+71338912 | None:intergenic |
| AATTGTCAAACATGATTCAC+CGG | 0.528999 | 4_4:-71338427 | Msa0700370:three_prime_UTR |
| CTGCATTCTTCAGCAAATCC+AGG | 0.531822 | 4_4:+71339132 | None:intergenic |
| GAAGTTGCTTACACTTGGTA+GGG | 0.534908 | 4_4:+71342475 | None:intergenic |
| GGAAGAGGCGGTTCAGAAAG+AGG | 0.535941 | 4_4:-71338749 | Msa0700370:intron |
| ATTAAATAGATATTTCTTGG+TGG | 0.542034 | 4_4:-71338379 | Msa0700370:three_prime_UTR |
| CATACGGTTGATTCTTCCAT+GGG | 0.548316 | 4_4:+71338913 | None:intergenic |
| CGCAGAACATACAGAGCCCA+TGG | 0.557011 | 4_4:-71338929 | Msa0700370:CDS |
| GTTGGCAGCAAGCAAGAAGA+GGG | 0.565267 | 4_4:-71338615 | Msa0700370:CDS |
| ACCTGCAAATAAACGATAGA+GGG | 0.576091 | 4_4:+71342655 | None:intergenic |
| AGCAGGAATGAAGTGAGGTA+TGG | 0.580970 | 4_4:+71342683 | None:intergenic |
| GGGCAACTTCCTGATGGCAA+AGG | 0.587242 | 4_4:+71339310 | None:intergenic |
| GGTCAAGGGCAACTTCCTGA+TGG | 0.590928 | 4_4:+71339304 | None:intergenic |
| AGTTGGCAGCAAGCAAGAAG+AGG | 0.597913 | 4_4:-71338616 | Msa0700370:CDS |
| ATTGTACTTGCAGAACACTA+GGG | 0.598625 | 4_4:-71339339 | Msa0700370:intron |
| TGACAAGACCTAAGAGTACA+AGG | 0.608536 | 4_4:+71338565 | None:intergenic |
| GTTTCTGTCGTGGTGTTGGG+AGG | 0.609236 | 4_4:-71339223 | Msa0700370:CDS |
| AAAATCAACTCAATGTGGCA+AGG | 0.612514 | 4_4:+71338781 | None:intergenic |
| TTTCCAGCCGGAGTCCCAGT+TGG | 0.613767 | 4_4:-71338633 | Msa0700370:intron |
| TTTATCTGAAAAGGAAGAGG+CGG | 0.620263 | 4_4:-71338761 | Msa0700370:CDS |
| ACAGAAACGTCTGAATGGAA+TGG | 0.621533 | 4_4:+71339238 | None:intergenic |
| CAGATAAAATCAACTCAATG+TGG | 0.623662 | 4_4:+71338776 | None:intergenic |
| CAGGAAGTTGCCCTTGACCA+AGG | 0.624452 | 4_4:-71339300 | Msa0700370:CDS |
| CATGCAGCCACCAAGGCTCG+TGG | 0.636269 | 4_4:-71342364 | Msa0700370:intron |
| GACACTCTAATGGACAAGGA+AGG | 0.649233 | 4_4:-71339181 | Msa0700370:CDS |
| TTACCTTGAAATGAACTCTG+AGG | 0.651324 | 4_4:+71342335 | None:intergenic |
| ACTCTAATGGACAAGGAAGG+TGG | 0.651493 | 4_4:-71339178 | Msa0700370:CDS |
| CTGAGAGCAGGAATGAAGTG+AGG | 0.665047 | 4_4:+71342678 | None:intergenic |
| AATAGACACTCTAATGGACA+AGG | 0.667364 | 4_4:-71339185 | Msa0700370:CDS |
| TTCAATACTTACCATGACGA+CGG | 0.679696 | 4_4:+71342621 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTATTTTTTTTATA+AGG | - | chr4_4:71338992-71339011 | Msa0700370:CDS | 0.0% |
| !! | TATATTAATTGAAATGAATA+AGG | + | chr4_4:71339898-71339917 | None:intergenic | 10.0% |
| !!! | TGTTTTATTATTATAGATTA+TGG | - | chr4_4:71340719-71340738 | Msa0700370:intron | 10.0% |
| !! | ATCATTAATAAAACATAATT+GGG | + | chr4_4:71341614-71341633 | None:intergenic | 10.0% |
| !! | AATCATTAATAAAACATAAT+TGG | + | chr4_4:71341615-71341634 | None:intergenic | 10.0% |
| !! | TTCATAAAAAAATCATATAA+AGG | + | chr4_4:71341670-71341689 | None:intergenic | 10.0% |
| !!! | TTTTTATAAGGTAATAGATA+AGG | - | chr4_4:71339004-71339023 | Msa0700370:intron | 15.0% |
| !!! | ATTTAGTTTATAGATGAAAA+AGG | - | chr4_4:71340757-71340776 | Msa0700370:intron | 15.0% |
| !!! | TAATAACCATGATTTTTTTA+AGG | - | chr4_4:71340829-71340848 | Msa0700370:intron | 15.0% |
| !!! | ATATAAAACTCATTGTTATT+GGG | - | chr4_4:71341025-71341044 | Msa0700370:intron | 15.0% |
| !! | TATATAATCAAGTAATAATG+AGG | + | chr4_4:71341266-71341285 | None:intergenic | 15.0% |
| !!! | CAACTTGTATTTTTAATTAA+AGG | - | chr4_4:71341503-71341522 | Msa0700370:intron | 15.0% |
| !! | TATTGCTTATTTAATTGTTT+CGG | - | chr4_4:71342351-71342370 | Msa0700370:CDS | 15.0% |
| !!! | TATAAAATAGAACATAGTTT+TGG | + | chr4_4:71342554-71342573 | None:intergenic | 15.0% |
| !!! | TCTATTTAATGATTTTATCA+CGG | + | chr4_4:71342660-71342679 | None:intergenic | 15.0% |
| !! | ATCATTAAATAGATATTTCT+TGG | - | chr4_4:71342667-71342686 | Msa0700370:CDS | 15.0% |
| !!! | TGTTTGTTTTTCGAATTTTT+AGG | - | chr4_4:71338526-71338545 | Msa0700370:three_prime_UTR | 20.0% |
| !!! | TTTTGTGTTTTAAGCATAAT+TGG | - | chr4_4:71338607-71338626 | Msa0700370:exon | 20.0% |
| !! | TACAACAAAAAATGAGTATT+AGG | + | chr4_4:71338818-71338837 | None:intergenic | 20.0% |
| !! | AGAAATGTAGTTTGAAAATT+TGG | - | chr4_4:71339129-71339148 | Msa0700370:CDS | 20.0% |
| !!! | TAAAACTTTTCTATGTAATG+GGG | + | chr4_4:71339350-71339369 | None:intergenic | 20.0% |
| !!! | CTAAAACTTTTCTATGTAAT+GGG | + | chr4_4:71339351-71339370 | None:intergenic | 20.0% |
| !!! | ACTAAAACTTTTCTATGTAA+TGG | + | chr4_4:71339352-71339371 | None:intergenic | 20.0% |
| !! | TACTAATTATTGATCATTGA+TGG | - | chr4_4:71339794-71339813 | Msa0700370:intron | 20.0% |
| !! | ATGAAGTTAATTGATATACT+TGG | - | chr4_4:71339920-71339939 | Msa0700370:intron | 20.0% |
| !!! | ATATAAAACCCATTGTTATT+GGG | - | chr4_4:71340017-71340036 | Msa0700370:intron | 20.0% |
| !! | GAAACCTATAATCATAAAAA+GGG | + | chr4_4:71340218-71340237 | None:intergenic | 20.0% |
| !! | TGAAACCTATAATCATAAAA+AGG | + | chr4_4:71340219-71340238 | None:intergenic | 20.0% |
| !! | ATGATTATAGGTTTCATAAA+TGG | - | chr4_4:71340223-71340242 | Msa0700370:intron | 20.0% |
| !!! | ATATATAACCCATTGTTATT+GGG | - | chr4_4:71340628-71340647 | Msa0700370:intron | 20.0% |
| !! | AGAACCTTAAATCATAAAAA+GGG | + | chr4_4:71340864-71340883 | None:intergenic | 20.0% |
| !! | GATATAAAACTCATTGTTAT+TGG | - | chr4_4:71341024-71341043 | Msa0700370:intron | 20.0% |
| !! | TACTTGATTATATAAGACAT+AGG | - | chr4_4:71341272-71341291 | Msa0700370:intron | 20.0% |
| !!! | ATCATAAGATTTGAAACATA+CGG | + | chr4_4:71342155-71342174 | None:intergenic | 20.0% |
| !!! | GTTCTATTTTATACTGAATT+TGG | - | chr4_4:71342561-71342580 | Msa0700370:intron | 20.0% |
| !! | ATTAAATAGATATTTCTTGG+TGG | - | chr4_4:71342670-71342689 | Msa0700370:CDS | 20.0% |
| ! | AAGCTAAAAACAAGTTTGTA+AGG | - | chr4_4:71338900-71338919 | Msa0700370:intron | 25.0% |
| !! | TAGTCATTGTCAATTTTGTT+GGG | - | chr4_4:71339047-71339066 | Msa0700370:intron | 25.0% |
| ! | ATGTAGTTTGAAAATTTGGA+AGG | - | chr4_4:71339133-71339152 | Msa0700370:CDS | 25.0% |
| ! | TTGAAAATTTGGAAGGAAAA+AGG | - | chr4_4:71339140-71339159 | Msa0700370:CDS | 25.0% |
| !! | ATGTTATTTGAAAGACAAAC+TGG | + | chr4_4:71339487-71339506 | None:intergenic | 25.0% |
| !!! | GGTTTTCTCTATATTTTAAC+TGG | + | chr4_4:71339574-71339593 | None:intergenic | 25.0% |
| ! | TGAACCTTAAATCATTACAT+GGG | + | chr4_4:71339724-71339743 | None:intergenic | 25.0% |
| !! | ATTTAAGGTTCACTAAATGA+GGG | - | chr4_4:71339732-71339751 | Msa0700370:intron | 25.0% |
| ! | CCAAACAATCTAAGTAATAA+GGG | + | chr4_4:71339863-71339882 | None:intergenic | 25.0% |
| ! | ACCAAACAATCTAAGTAATA+AGG | + | chr4_4:71339864-71339883 | None:intergenic | 25.0% |
| ! | GATATAAAACCCATTGTTAT+TGG | - | chr4_4:71340016-71340035 | Msa0700370:intron | 25.0% |
| !! | AGTTCCCTTTTTATGATTAT+AGG | - | chr4_4:71340211-71340230 | Msa0700370:intron | 25.0% |
| ! | GATATATAACCCATTGTTAT+TGG | - | chr4_4:71340627-71340646 | Msa0700370:intron | 25.0% |
| ! | TAGTTTATAGATGAAAAAGG+CGG | - | chr4_4:71340760-71340779 | Msa0700370:intron | 25.0% |
| ! | CAGAACCTTAAATCATAAAA+AGG | + | chr4_4:71340865-71340884 | None:intergenic | 25.0% |
| !! | TTTTATATCCCTGAATGTTA+CGG | + | chr4_4:71341013-71341032 | None:intergenic | 25.0% |
| ! | ATGTAATATTGAACTGGAAA+AGG | + | chr4_4:71341313-71341332 | None:intergenic | 25.0% |
| !! | TTTTCCAGTTCAATATTACA+TGG | - | chr4_4:71341312-71341331 | Msa0700370:intron | 25.0% |
| !! | TTTTCCATGTAATATTGAAC+TGG | + | chr4_4:71341319-71341338 | None:intergenic | 25.0% |
| ! | CTCTCTAAACAATTATTGTT+TGG | - | chr4_4:71341566-71341585 | Msa0700370:intron | 25.0% |
| ! | AACGTTAATTACTACTTTCT+AGG | - | chr4_4:71342029-71342048 | Msa0700370:intron | 25.0% |
| !!! | TGTGTTTTTTTTTGAAAGTG+TGG | - | chr4_4:71342198-71342217 | Msa0700370:intron | 25.0% |
| !!! | TGAGTTGATTTTATCTGAAA+AGG | - | chr4_4:71342279-71342298 | Msa0700370:intron | 25.0% |
| TTAGGTAACACAAATTGAAC+TGG | + | chr4_4:71338800-71338819 | None:intergenic | 30.0% | |
| GAACTTATGTATTTCTCTGA+TGG | - | chr4_4:71338863-71338882 | Msa0700370:intron | 30.0% | |
| ATAAGGCACATGATATCAAA+CGG | - | chr4_4:71339021-71339040 | Msa0700370:intron | 30.0% | |
| CAACAAAATTGACAATGACT+AGG | + | chr4_4:71339048-71339067 | None:intergenic | 30.0% | |
| ! | CTAGTCATTGTCAATTTTGT+TGG | - | chr4_4:71339046-71339065 | Msa0700370:intron | 30.0% |
| ACAATAGATGTAGTGAAACT+TGG | - | chr4_4:71339391-71339410 | Msa0700370:intron | 30.0% | |
| !! | TTGTTGTTTATGTTGTACTG+AGG | - | chr4_4:71339457-71339476 | Msa0700370:intron | 30.0% |
| GAAACTAGTGTCTAATAGAT+GGG | + | chr4_4:71339595-71339614 | None:intergenic | 30.0% | |
| ! | CATCTATTAGACACTAGTTT+CGG | - | chr4_4:71339594-71339613 | Msa0700370:intron | 30.0% |
| ! | TTTTCATAGGGTTATCTATC+AGG | + | chr4_4:71339624-71339643 | None:intergenic | 30.0% |
| ! | AGATAATAGCCATGGTTTTT+GGG | - | chr4_4:71339686-71339705 | Msa0700370:intron | 30.0% |
| AACTCCCATGTAATGATTTA+AGG | - | chr4_4:71339717-71339736 | Msa0700370:intron | 30.0% | |
| GTGAACCTTAAATCATTACA+TGG | + | chr4_4:71339725-71339744 | None:intergenic | 30.0% | |
| ! | GATTTAAGGTTCACTAAATG+AGG | - | chr4_4:71339731-71339750 | Msa0700370:intron | 30.0% |
| TGTTTCATTTAGCATCTTAG+TGG | - | chr4_4:71339822-71339841 | Msa0700370:intron | 30.0% | |
| CCCTTATTACTTAGATTGTT+TGG | - | chr4_4:71339860-71339879 | Msa0700370:intron | 30.0% | |
| ! | TTTTATATCCCTGAAGGTTA+CGG | + | chr4_4:71340005-71340024 | None:intergenic | 30.0% |
| AATGTACCTCGTTAAATTCA+GGG | - | chr4_4:71340184-71340203 | Msa0700370:intron | 30.0% | |
| ACCTCATTACTTAGATTGTT+TGG | - | chr4_4:71340365-71340384 | Msa0700370:intron | 30.0% | |
| ACCAAACAATCTAAGTAATG+AGG | + | chr4_4:71340369-71340388 | None:intergenic | 30.0% | |
| ACCTCATTACTTAGATTGTT+TGG | - | chr4_4:71340365-71340384 | Msa0700370:intron | 30.0% | |
| ACCAAACAATCTAAGTAATG+AGG | + | chr4_4:71340369-71340388 | None:intergenic | 30.0% | |
| TTGAAAAAAAAGCAGTGGTT+TGG | - | chr4_4:71340570-71340589 | Msa0700370:intron | 30.0% | |
| TTATATATCCCTGAAGGTTA+CGG | + | chr4_4:71340616-71340635 | None:intergenic | 30.0% | |
| GGTTCACCTTAAAAAAATCA+TGG | + | chr4_4:71340838-71340857 | None:intergenic | 30.0% | |
| CTTAAATCATAAAAAGGGAG+AGG | + | chr4_4:71340859-71340878 | None:intergenic | 30.0% | |
| ! | CTCTCCCTTTTTATGATTTA+AGG | - | chr4_4:71340857-71340876 | Msa0700370:intron | 30.0% |
| TTTATATCCCTGAATGTTAC+GGG | + | chr4_4:71341012-71341031 | None:intergenic | 30.0% | |
| ! | TGATATGTGTTGACATGTAT+TGG | - | chr4_4:71341166-71341185 | Msa0700370:intron | 30.0% |
| ATTACATGGAAAAGACGTAT+AGG | - | chr4_4:71341326-71341345 | Msa0700370:intron | 30.0% | |
| TCCTGATGTAAAAAGAAAAC+AGG | - | chr4_4:71341359-71341378 | Msa0700370:intron | 30.0% | |
| ! | ACCTGTTTTCTTTTTACATC+AGG | + | chr4_4:71341363-71341382 | None:intergenic | 30.0% |
| ATTACTACTTTCTAGGTCAA+AGG | - | chr4_4:71342036-71342055 | Msa0700370:intron | 30.0% | |
| CAGATAAAATCAACTCAATG+TGG | + | chr4_4:71342276-71342295 | None:intergenic | 30.0% | |
| ! | GATTTTATCTGAAAAGGAAG+AGG | - | chr4_4:71342285-71342304 | Msa0700370:intron | 30.0% |
| ! | TAATTGTTTCGGCAAGATTT+TGG | - | chr4_4:71342362-71342381 | Msa0700370:intron | 30.0% |
| !!! | ATTCTGATATTTTTTCCAGC+CGG | - | chr4_4:71342404-71342423 | Msa0700370:intron | 30.0% |
| AATTGTCAAACATGATTCAC+CGG | - | chr4_4:71342622-71342641 | Msa0700370:intron | 30.0% | |
| ACCTGCAAATAAACGATAGA+GGG | + | chr4_4:71338397-71338416 | None:intergenic | 35.0% | |
| AACCTGCAAATAAACGATAG+AGG | + | chr4_4:71338398-71338417 | None:intergenic | 35.0% | |
| TTCAATACTTACCATGACGA+CGG | + | chr4_4:71338431-71338450 | None:intergenic | 35.0% | |
| TTACAGAAGTTGCTTACACT+TGG | + | chr4_4:71338582-71338601 | None:intergenic | 35.0% | |
| TTACCTTGAAATGAACTCTG+AGG | + | chr4_4:71338717-71338736 | None:intergenic | 35.0% | |
| AAATTTGGAAGGAAAAAGGC+TGG | - | chr4_4:71339144-71339163 | Msa0700370:CDS | 35.0% | |
| AATTTGGAAGGAAAAAGGCT+GGG | - | chr4_4:71339145-71339164 | Msa0700370:CDS | 35.0% | |
| CATGGTAACATATGTTCACA+TGG | + | chr4_4:71339179-71339198 | None:intergenic | 35.0% | |
| ! | TTACAAAAGGCATGTTCACA+TGG | + | chr4_4:71339197-71339216 | None:intergenic | 35.0% |
| GCATGTTCACATGTTACAAA+AGG | + | chr4_4:71339210-71339229 | None:intergenic | 35.0% | |
| CGAAACTAGTGTCTAATAGA+TGG | + | chr4_4:71339596-71339615 | None:intergenic | 35.0% | |
| TGAACCTGTCGTTAAAATCA+GGG | - | chr4_4:71339663-71339682 | Msa0700370:intron | 35.0% | |
| ! | GAGATAATAGCCATGGTTTT+TGG | - | chr4_4:71339685-71339704 | Msa0700370:intron | 35.0% |
| AAATCATTACATGGGAGTTG+AGG | + | chr4_4:71339716-71339735 | None:intergenic | 35.0% | |
| AACCTGATTGAAAAAAGCAG+TGG | - | chr4_4:71339954-71339973 | Msa0700370:intron | 35.0% | |
| TTTATATCCCTGAAGGTTAC+GGG | + | chr4_4:71340004-71340023 | None:intergenic | 35.0% | |
| !! | AATGGGTTTTATATCCCTGA+AGG | + | chr4_4:71340011-71340030 | None:intergenic | 35.0% |
| TAGGTTCACCCAATAACAAT+GGG | + | chr4_4:71340028-71340047 | None:intergenic | 35.0% | |
| ATAGGTTCACCCAATAACAA+TGG | + | chr4_4:71340029-71340048 | None:intergenic | 35.0% | |
| GTATCACAAAGACAAGACAT+AGG | + | chr4_4:71340047-71340066 | None:intergenic | 35.0% | |
| GAATGTACCTCGTTAAATTC+AGG | - | chr4_4:71340183-71340202 | Msa0700370:intron | 35.0% | |
| !!! | CCACTGCTTTTTTTTCAATC+AGG | + | chr4_4:71340568-71340587 | None:intergenic | 35.0% |
| CCTGATTGAAAAAAAAGCAG+TGG | - | chr4_4:71340565-71340584 | Msa0700370:intron | 35.0% | |
| TATATATCCCTGAAGGTTAC+GGG | + | chr4_4:71340615-71340634 | None:intergenic | 35.0% | |
| !! | AATGGGTTATATATCCCTGA+AGG | + | chr4_4:71340622-71340641 | None:intergenic | 35.0% |
| TTTATAGATGAAAAAGGCGG+TGG | - | chr4_4:71340763-71340782 | Msa0700370:intron | 35.0% | |
| AACCTGATTGAAAAAAGCAG+TGG | - | chr4_4:71339954-71339973 | Msa0700370:intron | 35.0% | |
| GTATCACAAAGACAAGACAT+AGG | + | chr4_4:71340047-71340066 | None:intergenic | 35.0% | |
| TCTTTGTGATACGTGATTGA+AGG | - | chr4_4:71341063-71341082 | Msa0700370:intron | 35.0% | |
| ATTGAAGGTTCAGTAAACGA+TGG | - | chr4_4:71341078-71341097 | Msa0700370:intron | 35.0% | |
| TGATTTAGCCACCTTCTTAA+TGG | - | chr4_4:71341223-71341242 | Msa0700370:intron | 35.0% | |
| AGTAGCAGTAGCTTAATTGT+AGG | + | chr4_4:71341642-71341661 | None:intergenic | 35.0% | |
| AATTGTACTTGCAGAACACT+AGG | - | chr4_4:71341709-71341728 | Msa0700370:intron | 35.0% | |
| ATTGTACTTGCAGAACACTA+GGG | - | chr4_4:71341710-71341729 | Msa0700370:intron | 35.0% | |
| ! | TCCATTAGAGTGTCTATTCT+TGG | + | chr4_4:71341862-71341881 | None:intergenic | 35.0% |
| ! | AATAGACACTCTAATGGACA+AGG | - | chr4_4:71341864-71341883 | Msa0700370:intron | 35.0% |
| TACTTTCTAGGTCAAAGGTT+TGG | - | chr4_4:71342041-71342060 | Msa0700370:intron | 35.0% | |
| AAAATCAACTCAATGTGGCA+AGG | + | chr4_4:71342271-71342290 | None:intergenic | 35.0% | |
| TTTATCTGAAAAGGAAGAGG+CGG | - | chr4_4:71342288-71342307 | Msa0700370:intron | 35.0% | |
| ! | ATCACGGTTTTTGTAAACTC+CGG | + | chr4_4:71342644-71342663 | None:intergenic | 35.0% |
| TTACACTTGGTAGGGTTATC+AGG | + | chr4_4:71338569-71338588 | None:intergenic | 40.0% | |
| GAAGTTGCTTACACTTGGTA+GGG | + | chr4_4:71338577-71338596 | None:intergenic | 40.0% | |
| AGAAGTTGCTTACACTTGGT+AGG | + | chr4_4:71338578-71338597 | None:intergenic | 40.0% | |
| !!! | TTTTTTACATGCAGCCACCA+AGG | - | chr4_4:71338678-71338697 | Msa0700370:intron | 40.0% |
| TGACCTCAGAGTTCATTTCA+AGG | - | chr4_4:71338711-71338730 | Msa0700370:intron | 40.0% | |
| ATTTGGAAGGAAAAAGGCTG+GGG | - | chr4_4:71339146-71339165 | Msa0700370:CDS | 40.0% | |
| ACGAATCACAAACAGAGACT+CGG | + | chr4_4:71339305-71339324 | None:intergenic | 40.0% | |
| !! | ACAGGCAACTGCTTTTCATA+GGG | + | chr4_4:71339636-71339655 | None:intergenic | 40.0% |
| !! | AACAGGCAACTGCTTTTCAT+AGG | + | chr4_4:71339637-71339656 | None:intergenic | 40.0% |
| CGACAGGTTCACAAAATAAC+AGG | + | chr4_4:71339654-71339673 | None:intergenic | 40.0% | |
| GTGAACCTGTCGTTAAAATC+AGG | - | chr4_4:71339662-71339681 | Msa0700370:intron | 40.0% | |
| !! | ATCTCCCTGATTTTAACGAC+AGG | + | chr4_4:71339670-71339689 | None:intergenic | 40.0% |
| AATCAGGGAGATAATAGCCA+TGG | - | chr4_4:71339678-71339697 | Msa0700370:intron | 40.0% | |
| ! | GAGGGTACATTTCGTACATA+TGG | - | chr4_4:71339750-71339769 | Msa0700370:intron | 40.0% |
| TCTAAGTAATAAGGGTAGCC+AGG | + | chr4_4:71339855-71339874 | None:intergenic | 40.0% | |
| !!! | GACCACTGCTTTTTTCAATC+AGG | + | chr4_4:71339959-71339978 | None:intergenic | 40.0% |
| GATTGAAAAAAGCAGTGGTC+TGG | - | chr4_4:71339959-71339978 | Msa0700370:intron | 40.0% | |
| TCTTTGTGATACGTGACTGA+AGG | - | chr4_4:71340055-71340074 | Msa0700370:intron | 40.0% | |
| ACTGAAGGTTCAGTAAACGA+TGG | - | chr4_4:71340070-71340089 | Msa0700370:intron | 40.0% | |
| CTATCTCCCTGAATTTAACG+AGG | + | chr4_4:71340193-71340212 | None:intergenic | 40.0% | |
| ! | TCTAAGTAATGAGGTTAGCC+AGG | + | chr4_4:71340360-71340379 | None:intergenic | 40.0% |
| ! | TCTAAGTAATGAGGTTAGCC+AGG | + | chr4_4:71340360-71340379 | None:intergenic | 40.0% |
| GAGGTTCACCCAATAACAAT+GGG | + | chr4_4:71340639-71340658 | None:intergenic | 40.0% | |
| AGAGGTTCACCCAATAACAA+TGG | + | chr4_4:71340640-71340659 | None:intergenic | 40.0% | |
| GTATCACAAAGACAAGACAG+AGG | + | chr4_4:71340658-71340677 | None:intergenic | 40.0% | |
| TCTTTGTGATACGTGACTGA+AGG | - | chr4_4:71340055-71340074 | Msa0700370:intron | 40.0% | |
| !! | GTGGTTTGTTGTCTTGTGAA+TGG | - | chr4_4:71340782-71340801 | Msa0700370:intron | 40.0% |
| TCTCCCTGAGTTTAACAAGA+GGG | + | chr4_4:71340809-71340828 | None:intergenic | 40.0% | |
| ATCTCCCTGAGTTTAACAAG+AGG | + | chr4_4:71340810-71340829 | None:intergenic | 40.0% | |
| CAGGTTGTTGCATGACTATA+GGG | + | chr4_4:71340948-71340967 | None:intergenic | 40.0% | |
| ! | TCAGGTTGTTGCATGACTAT+AGG | + | chr4_4:71340949-71340968 | None:intergenic | 40.0% |
| !!! | GACCACTGCTTTTTTCAATC+AGG | + | chr4_4:71339959-71339978 | None:intergenic | 40.0% |
| GATTGAAAAAAGCAGTGGTC+TGG | - | chr4_4:71339959-71339978 | Msa0700370:intron | 40.0% | |
| AAGCAACTAGGCCATTAAGA+AGG | + | chr4_4:71341237-71341256 | None:intergenic | 40.0% | |
| ATGAGGCAAATCAAGCAACT+AGG | + | chr4_4:71341249-71341268 | None:intergenic | 40.0% | |
| ATATCACAGACATTTCCGAG+AGG | + | chr4_4:71341409-71341428 | None:intergenic | 40.0% | |
| !!! | TACCTTTTAGCCTTGGTCAA+GGG | + | chr4_4:71341762-71341781 | None:intergenic | 40.0% |
| ! | TTCCAAGTACCTTTTAGCCT+TGG | + | chr4_4:71341769-71341788 | None:intergenic | 40.0% |
| ACAGAAACGTCTGAATGGAA+TGG | + | chr4_4:71341814-71341833 | None:intergenic | 40.0% | |
| GCCAAGAATAGACACTCTAA+TGG | - | chr4_4:71341858-71341877 | Msa0700370:intron | 40.0% | |
| !! | ATAAACTTCGCTGACTTGAC+TGG | + | chr4_4:71341897-71341916 | None:intergenic | 40.0% |
| ! | CATACGGTTGATTCTTCCAT+GGG | + | chr4_4:71342139-71342158 | None:intergenic | 40.0% |
| ! | ACATACGGTTGATTCTTCCA+TGG | + | chr4_4:71342140-71342159 | None:intergenic | 40.0% |
| AAGAAGAGGGCTTAAACTCT+AGG | - | chr4_4:71342447-71342466 | Msa0700370:intron | 40.0% | |
| TATTGCTGCCTTGTACTCTT+AGG | - | chr4_4:71342476-71342495 | Msa0700370:intron | 40.0% | |
| ! | TGACAAGACCTAAGAGTACA+AGG | + | chr4_4:71342487-71342506 | None:intergenic | 40.0% |
| AGCAGGAATGAAGTGAGGTA+TGG | + | chr4_4:71338369-71338388 | None:intergenic | 45.0% | |
| GCCCTCTATCGTTTATTTGC+AGG | - | chr4_4:71338393-71338412 | Msa0700370:three_prime_UTR | 45.0% | |
| GGCTAACTTAAACAACAGCG+AGG | + | chr4_4:71339284-71339303 | None:intergenic | 45.0% | |
| TGAGGTTCTCCCAAAAACCA+TGG | + | chr4_4:71339698-71339717 | None:intergenic | 45.0% | |
| CATCTTAGTGGCATAGTTCC+TGG | - | chr4_4:71339834-71339853 | Msa0700370:intron | 45.0% | |
| ! | TGTTTCAAGTAGCCTCCTAG+TGG | - | chr4_4:71340327-71340346 | Msa0700370:intron | 45.0% |
| !! | TACGGGTGGACTGTTCATAT+AGG | + | chr4_4:71340598-71340617 | None:intergenic | 45.0% |
| TGGACCCTCTTGTTAAACTC+AGG | - | chr4_4:71340802-71340821 | Msa0700370:intron | 45.0% | |
| GGACCCTCTTGTTAAACTCA+GGG | - | chr4_4:71340803-71340822 | Msa0700370:intron | 45.0% | |
| ATATCCCTGAATGTTACGGG+TGG | + | chr4_4:71341009-71341028 | None:intergenic | 45.0% | |
| CAACTAGGCCATTAAGAAGG+TGG | + | chr4_4:71341234-71341253 | None:intergenic | 45.0% | |
| TCTATATCGAGCAGTCCTCT+CGG | - | chr4_4:71341391-71341410 | Msa0700370:intron | 45.0% | |
| !!! | GTACCTTTTAGCCTTGGTCA+AGG | + | chr4_4:71341763-71341782 | None:intergenic | 45.0% |
| !! | GACCAAGGCTAAAAGGTACT+TGG | - | chr4_4:71341764-71341783 | Msa0700370:intron | 45.0% |
| AGACGTTCTTGCACACAAAC+AGG | - | chr4_4:71341788-71341807 | Msa0700370:intron | 45.0% | |
| ! | AGAGTGTCTATTCTTGGCCT+GGG | + | chr4_4:71341856-71341875 | None:intergenic | 45.0% |
| ! | TAGAGTGTCTATTCTTGGCC+TGG | + | chr4_4:71341857-71341876 | None:intergenic | 45.0% |
| ! | GACACTCTAATGGACAAGGA+AGG | - | chr4_4:71341868-71341887 | Msa0700370:intron | 45.0% |
| ! | ACTCTAATGGACAAGGAAGG+TGG | - | chr4_4:71341871-71341890 | Msa0700370:intron | 45.0% |
| CAAGTCAGCGAAGTTTATCC+TGG | - | chr4_4:71341899-71341918 | Msa0700370:intron | 45.0% | |
| CTGCATTCTTCAGCAAATCC+AGG | + | chr4_4:71341920-71341939 | None:intergenic | 45.0% | |
| GCTTCTGTGCTTGATTGACT+TGG | + | chr4_4:71342095-71342114 | None:intergenic | 45.0% | |
| !! | TAATTAATAATTGATATATT+TGG | - | chr4_4:71340529-71340548 | Msa0700370:intron | 5.0% |
| CTGAGAGCAGGAATGAAGTG+AGG | + | chr4_4:71338374-71338393 | None:intergenic | 50.0% | |
| !! | TACGGGTGGACTGCTCATAT+AGG | + | chr4_4:71339987-71340006 | None:intergenic | 50.0% |
| ATATCCCTGAAGGTTACGGG+TGG | + | chr4_4:71340001-71340020 | None:intergenic | 50.0% | |
| TAGCCAGGAACTATGCCACT+AGG | + | chr4_4:71339840-71339859 | None:intergenic | 50.0% | |
| ! | GAGTGTTTCAAGTAGCCTCC+TGG | - | chr4_4:71340324-71340343 | Msa0700370:intron | 50.0% |
| ! | TGTTTCAAGTAGCCTCCTGG+TGG | - | chr4_4:71340429-71340448 | Msa0700370:intron | 50.0% |
| ATATCCCTGAAGGTTACGGG+TGG | + | chr4_4:71340001-71340020 | None:intergenic | 50.0% | |
| TGCCCTTGACCAAGGCTAAA+AGG | - | chr4_4:71341757-71341776 | Msa0700370:intron | 50.0% | |
| CCACGACAGAAACGTCTGAA+TGG | + | chr4_4:71341819-71341838 | None:intergenic | 50.0% | |
| CCATTCAGACGTTTCTGTCG+TGG | - | chr4_4:71341816-71341835 | Msa0700370:intron | 50.0% | |
| AGACGTTTCTGTCGTGGTGT+TGG | - | chr4_4:71341822-71341841 | Msa0700370:intron | 50.0% | |
| GACGTTTCTGTCGTGGTGTT+GGG | - | chr4_4:71341823-71341842 | Msa0700370:intron | 50.0% | |
| ! | GGCGGTTCAGAAAGAGGTAT+TGG | - | chr4_4:71342306-71342325 | Msa0700370:intron | 50.0% |
| ! | CTTCTTGCTTGCTGCCAACT+GGG | + | chr4_4:71342433-71342452 | None:intergenic | 50.0% |
| ! | TCTTCTTGCTTGCTGCCAAC+TGG | + | chr4_4:71342434-71342453 | None:intergenic | 50.0% |
| AGTTGGCAGCAAGCAAGAAG+AGG | - | chr4_4:71342433-71342452 | Msa0700370:intron | 50.0% | |
| GTTGGCAGCAAGCAAGAAGA+GGG | - | chr4_4:71342434-71342453 | Msa0700370:intron | 50.0% | |
| AACGATAGAGGGCTGAGAGC+AGG | + | chr4_4:71338386-71338405 | None:intergenic | 55.0% | |
| TCCATCAAACGCCGTCGTCA+TGG | - | chr4_4:71338417-71338436 | Msa0700370:three_prime_UTR | 55.0% | |
| ACCATGACGACGGCGTTTGA+TGG | + | chr4_4:71338421-71338440 | None:intergenic | 55.0% | |
| CAGTCCACCCGTAACCTTCA+GGG | - | chr4_4:71339994-71340013 | Msa0700370:intron | 55.0% | |
| CCAGGAACTATGCCACTAGG+AGG | + | chr4_4:71340342-71340361 | None:intergenic | 55.0% | |
| CCTCCTAGTGGCATAGTTCC+TGG | - | chr4_4:71340339-71340358 | Msa0700370:intron | 55.0% | |
| ACAGTCCACCCGTAACCTTC+AGG | - | chr4_4:71340604-71340623 | Msa0700370:intron | 55.0% | |
| CAGTCCACCCGTAACCTTCA+GGG | - | chr4_4:71339994-71340013 | Msa0700370:intron | 55.0% | |
| TACGGGTGGACGGCTCATAT+AGG | + | chr4_4:71340995-71341014 | None:intergenic | 55.0% | |
| CCCTGAATGTTACGGGTGGA+CGG | + | chr4_4:71341005-71341024 | None:intergenic | 55.0% | |
| CCGTCCACCCGTAACATTCA+GGG | - | chr4_4:71341002-71341021 | Msa0700370:intron | 55.0% | |
| GGGAAACTGCCTTTGCCATC+AGG | - | chr4_4:71341730-71341749 | Msa0700370:intron | 55.0% | |
| GGGCAACTTCCTGATGGCAA+AGG | + | chr4_4:71341742-71341761 | None:intergenic | 55.0% | |
| GGTCAAGGGCAACTTCCTGA+TGG | + | chr4_4:71341748-71341767 | None:intergenic | 55.0% | |
| CAGGAAGTTGCCCTTGACCA+AGG | - | chr4_4:71341749-71341768 | Msa0700370:intron | 55.0% | |
| ! | GTTTCTGTCGTGGTGTTGGG+AGG | - | chr4_4:71341826-71341845 | Msa0700370:intron | 55.0% |
| CGCAGAACATACAGAGCCCA+TGG | - | chr4_4:71342120-71342139 | Msa0700370:intron | 55.0% | |
| GGAAGAGGCGGTTCAGAAAG+AGG | - | chr4_4:71342300-71342319 | Msa0700370:intron | 55.0% | |
| GCAGTCCACCCGTAACCTTC+AGG | - | chr4_4:71339993-71340012 | Msa0700370:intron | 60.0% | |
| TAGCCAGGAACTACGCCACC+AGG | + | chr4_4:71340447-71340466 | None:intergenic | 60.0% | |
| GCCGTCCACCCGTAACATTC+AGG | - | chr4_4:71341001-71341020 | Msa0700370:intron | 60.0% | |
| TTTCCAGCCGGAGTCCCAGT+TGG | - | chr4_4:71342416-71342435 | Msa0700370:intron | 60.0% | |
| CTTGCTGCCAACTGGGACTC+CGG | + | chr4_4:71342426-71342445 | None:intergenic | 60.0% | |
| CATGCAGCCACCAAGGCTCG+TGG | - | chr4_4:71338685-71338704 | Msa0700370:intron | 65.0% | |
| GTCAGCACCACGAGCCTTGG+TGG | + | chr4_4:71338695-71338714 | None:intergenic | 65.0% | |
| GAGGTCAGCACCACGAGCCT+TGG | + | chr4_4:71338698-71338717 | None:intergenic | 65.0% | |
| CCAGGAACTACGCCACCAGG+AGG | + | chr4_4:71340444-71340463 | None:intergenic | 65.0% | |
| ! | CCTCCTGGTGGCGTAGTTCC+TGG | - | chr4_4:71340441-71340460 | Msa0700370:intron | 65.0% |
| ! | TGGTGTTGGGAGGACAGCCC+AGG | - | chr4_4:71341836-71341855 | Msa0700370:intron | 65.0% |
| CTGCCAACTGGGACTCCGGC+TGG | + | chr4_4:71342422-71342441 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 71338364 | 71342707 | 71338364 | ID=Msa0700370;Name=Msa0700370 |
| chr4_4 | mRNA | 71338364 | 71342707 | 71338364 | ID=Msa0700370-mRNA-1;Parent=Msa0700370;Name=Msa0700370-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|1|0.85|1|1|1|7|246|197 |
| chr4_4 | exon | 71338364 | 71338648 | 71338364 | ID=Msa0700370-mRNA-1:exon:21741;Parent=Msa0700370-mRNA-1 |
| chr4_4 | exon | 71338750 | 71338817 | 71338750 | ID=Msa0700370-mRNA-1:exon:21740;Parent=Msa0700370-mRNA-1 |
| chr4_4 | exon | 71338918 | 71339020 | 71338918 | ID=Msa0700370-mRNA-1:exon:21739;Parent=Msa0700370-mRNA-1 |
| chr4_4 | exon | 71339118 | 71339348 | 71339118 | ID=Msa0700370-mRNA-1:exon:21738;Parent=Msa0700370-mRNA-1 |
| chr4_4 | exon | 71342339 | 71342379 | 71342339 | ID=Msa0700370-mRNA-1:exon:21737;Parent=Msa0700370-mRNA-1 |
| chr4_4 | exon | 71342487 | 71342523 | 71342487 | ID=Msa0700370-mRNA-1:exon:21736;Parent=Msa0700370-mRNA-1 |
| chr4_4 | exon | 71342633 | 71342707 | 71342633 | ID=Msa0700370-mRNA-1:exon:21735;Parent=Msa0700370-mRNA-1 |
| chr4_4 | CDS | 71342633 | 71342707 | 71342633 | ID=Msa0700370-mRNA-1:cds;Parent=Msa0700370-mRNA-1 |
| chr4_4 | CDS | 71342487 | 71342523 | 71342487 | ID=Msa0700370-mRNA-1:cds;Parent=Msa0700370-mRNA-1 |
| chr4_4 | CDS | 71342339 | 71342379 | 71342339 | ID=Msa0700370-mRNA-1:cds;Parent=Msa0700370-mRNA-1 |
| chr4_4 | CDS | 71339118 | 71339348 | 71339118 | ID=Msa0700370-mRNA-1:cds;Parent=Msa0700370-mRNA-1 |
| chr4_4 | CDS | 71338918 | 71339020 | 71338918 | ID=Msa0700370-mRNA-1:cds;Parent=Msa0700370-mRNA-1 |
| chr4_4 | CDS | 71338750 | 71338817 | 71338750 | ID=Msa0700370-mRNA-1:cds;Parent=Msa0700370-mRNA-1 |
| chr4_4 | CDS | 71338610 | 71338648 | 71338610 | ID=Msa0700370-mRNA-1:cds;Parent=Msa0700370-mRNA-1 |
| chr4_4 | three_prime_UTR | 71338364 | 71338609 | 71338364 | ID=Msa0700370-mRNA-1:three_prime_utr;Parent=Msa0700370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
