Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494630 | XP_013459167.1 | 97.534 | 365 | 9 | 0 | 1 | 365 | 1 | 365 | 0.0 | 724 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494630 | A0A072V4V0 | 97.534 | 365 | 9 | 0 | 1 | 365 | 1 | 365 | 0.0 | 724 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032980 | Msa0494630 | 0.813949 | 1.975429e-51 | -8.615850e-47 |
| Msa0078130 | Msa0494630 | 0.801688 | 7.999799e-49 | -8.615850e-47 |
| Msa0091350 | Msa0494630 | 0.812334 | 4.466523e-51 | -8.615850e-47 |
| Msa0106630 | Msa0494630 | 0.813859 | 2.067560e-51 | -8.615850e-47 |
| Msa0127340 | Msa0494630 | 0.809522 | 1.815239e-50 | -8.615850e-47 |
| Msa0153210 | Msa0494630 | 0.807125 | 5.888348e-50 | -8.615850e-47 |
| Msa0165830 | Msa0494630 | 0.807493 | 4.919884e-50 | -8.615850e-47 |
| Msa0373170 | Msa0494630 | 0.800045 | 1.732758e-48 | -8.615850e-47 |
| Msa0420430 | Msa0494630 | 0.815840 | 7.522033e-52 | -8.615850e-47 |
| Msa0421750 | Msa0494630 | 0.800930 | 1.144088e-48 | -8.615850e-47 |
| Msa0433760 | Msa0494630 | 0.804619 | 1.980481e-49 | -8.615850e-47 |
| Msa0466520 | Msa0494630 | 0.811732 | 6.042432e-51 | -8.615850e-47 |
| Msa0467690 | Msa0494630 | 0.802532 | 5.365245e-49 | -8.615850e-47 |
| Msa0477630 | Msa0494630 | 0.805586 | 1.242953e-49 | -8.615850e-47 |
| Msa0341680 | Msa0494630 | 0.800694 | 1.278103e-48 | -8.615850e-47 |
| Msa0494630 | Msa0513080 | 0.814021 | 1.904375e-51 | -8.615850e-47 |
| Msa0494630 | Msa0513560 | 0.803649 | 3.152165e-49 | -8.615850e-47 |
| Msa0494630 | Msa0514020 | 0.802018 | 6.846617e-49 | -8.615850e-47 |
| Msa0494630 | Msa0554300 | 0.812222 | 4.726906e-51 | -8.615850e-47 |
| Msa0494630 | Msa0577280 | 0.801414 | 9.105145e-49 | -8.615850e-47 |
| Msa0494630 | Msa0577330 | 0.801973 | 6.993152e-49 | -8.615850e-47 |
| Msa0494630 | Msa0608350 | 0.815590 | 8.552330e-52 | -8.615850e-47 |
| Msa0494630 | Msa0613630 | 0.800774 | 1.231028e-48 | -8.615850e-47 |
| Msa0494630 | Msa0620500 | 0.828636 | 8.053569e-55 | -8.615850e-47 |
| Msa0494630 | Msa0622920 | 0.802287 | 6.025207e-49 | -8.615850e-47 |
| Msa0494630 | Msa0647440 | 0.832390 | 9.712718e-56 | -8.615850e-47 |
| Msa0494630 | Msa0648040 | 0.801073 | 1.069395e-48 | -8.615850e-47 |
| Msa0494630 | Msa0648760 | 0.821541 | 3.823224e-53 | -8.615850e-47 |
| Msa0494630 | Msa0690320 | 0.819780 | 9.702301e-53 | -8.615850e-47 |
| Msa0494630 | Msa0690740 | 0.801888 | 7.278896e-49 | -8.615850e-47 |
| Msa0494630 | Msa0691270 | 0.814679 | 1.362921e-51 | -8.615850e-47 |
| Msa0494630 | Msa0714520 | 0.815200 | 1.044070e-51 | -8.615850e-47 |
| Msa0494630 | Msa0717900 | 0.825961 | 3.522086e-54 | -8.615850e-47 |
| Msa0494630 | Msa0816080 | 0.833109 | 6.440896e-56 | -8.615850e-47 |
| Msa0494630 | Msa0837680 | 0.815009 | 1.151392e-51 | -8.615850e-47 |
| Msa0494630 | Msa0861440 | 0.807599 | 4.671312e-50 | -8.615850e-47 |
| Msa0494630 | Msa0866460 | 0.814937 | 1.194242e-51 | -8.615850e-47 |
| Msa0494630 | Msa0879920 | 0.803646 | 3.155851e-49 | -8.615850e-47 |
| Msa0494630 | Msa0989370 | 0.811105 | 8.266713e-51 | -8.615850e-47 |
| Msa0494630 | Msa1078990 | 0.811293 | 7.526960e-51 | -8.615850e-47 |
| Msa0494630 | Msa1104220 | 0.808836 | 2.546607e-50 | -8.615850e-47 |
| Msa0494630 | Msa1213830 | 0.819299 | 1.249485e-52 | -8.615850e-47 |
| Msa0494630 | Msa1215980 | 0.828327 | 9.560033e-55 | -8.615850e-47 |
| Msa0494630 | Msa1223390 | 0.802230 | 6.192913e-49 | -8.615850e-47 |
| Msa0494630 | Msa1254420 | 0.803684 | 3.099367e-49 | -8.615850e-47 |
| Msa0494630 | Msa1254540 | 0.819293 | 1.253238e-52 | -8.615850e-47 |
| Msa0494630 | Msa1263740 | 0.815854 | 7.467627e-52 | -8.615850e-47 |
| Msa0494630 | Msa1263780 | 0.810543 | 1.094140e-50 | -8.615850e-47 |
| Msa0494630 | Msa1294460 | 0.816849 | 4.472817e-52 | -8.615850e-47 |
| Msa0494630 | Msa1294790 | 0.817069 | 3.991820e-52 | -8.615850e-47 |
| Msa0494630 | Msa1301820 | 0.806359 | 8.547775e-50 | -8.615850e-47 |
| Msa0494630 | Msa1332950 | 0.815547 | 8.740270e-52 | -8.615850e-47 |
| Msa0494630 | Msa1364680 | 0.821038 | 4.993068e-53 | -8.615850e-47 |
| Msa0494630 | Msa1406720 | 0.808197 | 3.485766e-50 | -8.615850e-47 |
| Msa0494630 | Msa1434640 | 0.801637 | 8.197980e-49 | -8.615850e-47 |
| Msa0494630 | Msa1457840 | 0.808454 | 3.072134e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494630 | MtrunA17_Chr3g0088311 | 97.260 | 365 | 9 | 1 | 1 | 365 | 1 | 364 | 0.0 | 717 |
| Msa0494630 | MtrunA17_Chr7g0257991 | 34.926 | 272 | 133 | 8 | 1 | 246 | 1 | 254 | 3.34e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0494630 | AT3G52110.2 | 42.473 | 372 | 162 | 12 | 1 | 361 | 1 | 331 | 3.13e-70 | 223 |
| Msa0494630 | AT3G52110.1 | 39.500 | 400 | 162 | 12 | 1 | 361 | 1 | 359 | 1.57e-66 | 214 |
| Msa0494630 | AT3G52110.3 | 41.369 | 336 | 128 | 9 | 1 | 297 | 1 | 306 | 1.27e-60 | 198 |
| Msa0494630 | AT3G52110.4 | 43.448 | 290 | 124 | 8 | 1 | 280 | 1 | 260 | 1.42e-56 | 186 |
Find 94 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAAATCCTCTGCTGTTT+TGG | 0.155399 | 3_4:-22896587 | None:intergenic |
| TGAAAACCAAAATCCGAATT+TGG | 0.214237 | 3_4:+22897312 | Msa0494630:CDS |
| GAGTAACCAAATTCGGATTT+TGG | 0.233277 | 3_4:-22897318 | None:intergenic |
| TTGGACGGGATGTGTGTTAA+AGG | 0.236511 | 3_4:+22897697 | Msa0494630:CDS |
| GATACAAGTACCTTCTAATT+TGG | 0.250372 | 3_4:-22897110 | None:intergenic |
| TGACTTGATCAAAGCCTTCT+TGG | 0.260330 | 3_4:-22897353 | None:intergenic |
| GATTCTCATTGAAATTAAAC+TGG | 0.271733 | 3_4:+22899099 | Msa0494630:exon |
| TGAATCTGAATTTATCATCT+TGG | 0.317982 | 3_4:-22897279 | None:intergenic |
| CAAAAGCCTTGGACATGTTC+TGG | 0.319084 | 3_4:+22899045 | Msa0494630:CDS |
| CAGATCACCAAGTCCTTTCA+AGG | 0.337664 | 3_4:+22896609 | Msa0494630:CDS |
| AATTGAGGAGTAACCAAATT+CGG | 0.341390 | 3_4:-22897325 | None:intergenic |
| AAGGAAACCATTGCTTGAAA+TGG | 0.343999 | 3_4:+22897660 | Msa0494630:CDS |
| GAATCTGAATTTATCATCTT+GGG | 0.347711 | 3_4:-22897278 | None:intergenic |
| TCTTCTTCTTTACTCTCTAC+AGG | 0.348257 | 3_4:-22897568 | None:intergenic |
| TTCTCCAAGTCAAGAGTTAT+AGG | 0.377448 | 3_4:-22898398 | None:intergenic |
| CTGCAATGAATTGAAGAGAT+TGG | 0.379870 | 3_4:+22897504 | Msa0494630:CDS |
| GTTTCAGATTCTTATATCAT+TGG | 0.380433 | 3_4:-22899236 | None:intergenic |
| AGCTTCATCATCATTGTTGT+TGG | 0.398451 | 3_4:-22896167 | None:intergenic |
| CTTCTCTCCGGTGTGATCAA+TGG | 0.429430 | 3_4:+22896033 | Msa0494630:exon |
| AGGTTCCAGATCCCGGCTAA+TGG | 0.435543 | 3_4:+22898520 | Msa0494630:CDS |
| TCTGTGATTTGATTCAGAAT+AGG | 0.438456 | 3_4:-22897478 | None:intergenic |
| CTCTTGACTTGGAGAATGTA+AGG | 0.438576 | 3_4:+22898405 | Msa0494630:CDS |
| ACATACCATTAGCCGGGATC+TGG | 0.445431 | 3_4:-22898525 | None:intergenic |
| TGGATAGAAGAGAGAAAGAA+AGG | 0.449130 | 3_4:+22897641 | Msa0494630:CDS |
| AGGAAACCATTGCTTGAAAT+GGG | 0.454113 | 3_4:+22897661 | Msa0494630:CDS |
| GAAAGAGTTGATTTCAATGA+AGG | 0.454599 | 3_4:-22897430 | None:intergenic |
| AGAGATTGGCATTAAGAGCT+AGG | 0.455601 | 3_4:+22897518 | Msa0494630:CDS |
| TTGAAAACCTTGAAAGGACT+TGG | 0.458556 | 3_4:-22896616 | None:intergenic |
| CTATTTATATATTGTACTCA+TGG | 0.462884 | 3_4:+22899167 | Msa0494630:three_prime_UTR |
| GGACAAGAAGTCAACAAACT+TGG | 0.464269 | 3_4:-22896131 | None:intergenic |
| TGGACGGGATGTGTGTTAAA+GGG | 0.464596 | 3_4:+22897698 | Msa0494630:CDS |
| CTTCTTCTTTACTCTCTACA+GGG | 0.471523 | 3_4:-22897567 | None:intergenic |
| CATGCCTATAACTCTTGACT+TGG | 0.473248 | 3_4:+22898394 | Msa0494630:CDS |
| GCCTTCTTGGACTTAAATTG+AGG | 0.474331 | 3_4:-22897340 | None:intergenic |
| TGTTGTTGGTGTTATGATTG+AGG | 0.476015 | 3_4:-22896153 | None:intergenic |
| GCCTTACCCATTTCAAGCAA+TGG | 0.476077 | 3_4:-22897667 | None:intergenic |
| CTCCCTCTCTCTCTTCTCTC+CGG | 0.482043 | 3_4:+22896021 | Msa0494630:five_prime_UTR |
| GTTGTTGGTGTTATGATTGA+GGG | 0.482834 | 3_4:-22896152 | None:intergenic |
| GACCTCGCCGGTGAACGCTT+TGG | 0.485298 | 3_4:+22897612 | Msa0494630:CDS |
| CCTCAAAAGGTTCCAGATCC+CGG | 0.489613 | 3_4:+22898513 | Msa0494630:CDS |
| TCCTCAATTTAAGTCCAAGA+AGG | 0.490589 | 3_4:+22897339 | Msa0494630:CDS |
| CAAGTGGTGACCAAATTAGA+AGG | 0.496358 | 3_4:+22897100 | Msa0494630:CDS |
| CTTCTAATTTGGTCACCACT+TGG | 0.502583 | 3_4:-22897099 | None:intergenic |
| GGTGAACGCTTTGGCAGAGT+TGG | 0.511955 | 3_4:+22897621 | Msa0494630:CDS |
| AAAAGTATTACAATCTCTGA+TGG | 0.516339 | 3_4:+22899014 | Msa0494630:CDS |
| CGGAGAGAAGAGAGAGAGGG+AGG | 0.517744 | 3_4:-22896020 | None:intergenic |
| GAGAAGGGAAAATCAAGAGA+AGG | 0.517752 | 3_4:+22897230 | Msa0494630:intron |
| AACTCTGCCAAAGCGTTCAC+CGG | 0.518508 | 3_4:-22897619 | None:intergenic |
| TGGAACCCGCGAAAATCGAT+TGG | 0.518768 | 3_4:+22896053 | Msa0494630:CDS |
| TTGGGGAGAAGATGATGAAA+GGG | 0.527318 | 3_4:-22897260 | None:intergenic |
| TGGAAGAGAAACAAAAGCCT+TGG | 0.531913 | 3_4:+22899034 | Msa0494630:CDS |
| ACCATTGCTTGAAATGGGTA+AGG | 0.532730 | 3_4:+22897666 | Msa0494630:CDS |
| TGTAGAGAGTAAAGAAGAAG+AGG | 0.537526 | 3_4:+22897570 | Msa0494630:CDS |
| GGTTAGGACATACCATTAGC+CGG | 0.538912 | 3_4:-22898532 | None:intergenic |
| AATAACCCTAACCCCTCAAA+AGG | 0.543271 | 3_4:+22898500 | Msa0494630:CDS |
| TGGAGAATGTAAGGCAAAAG+AGG | 0.545027 | 3_4:+22898414 | Msa0494630:CDS |
| GAGATTGGCATTAAGAGCTA+GGG | 0.549776 | 3_4:+22897519 | Msa0494630:CDS |
| ACAACAATGATGATGAAGCT+TGG | 0.550311 | 3_4:+22896170 | Msa0494630:CDS |
| CAAGAATTGAAAACCTTGAA+AGG | 0.551181 | 3_4:-22896622 | None:intergenic |
| CTTGGGGAGAAGATGATGAA+AGG | 0.552832 | 3_4:-22897261 | None:intergenic |
| AATGGGTAAGGCTGAAAGGT+TGG | 0.556161 | 3_4:+22897678 | Msa0494630:CDS |
| AATCTGAATTTATCATCTTG+GGG | 0.559370 | 3_4:-22897277 | None:intergenic |
| CAGCTTGATAATGTTGTGCA+AGG | 0.574727 | 3_4:-22899077 | None:intergenic |
| GTTAGGACATACCATTAGCC+GGG | 0.576783 | 3_4:-22898531 | None:intergenic |
| GACAAGAAGTCAACAAACTT+GGG | 0.580519 | 3_4:-22896130 | None:intergenic |
| ACACCGGAGAGAAGAGAGAG+AGG | 0.584521 | 3_4:-22896024 | None:intergenic |
| AGAAGGGAAAATCAAGAGAA+GGG | 0.590283 | 3_4:+22897231 | Msa0494630:CDS |
| GGAGAGAAGAGAGAGAGGGA+GGG | 0.601465 | 3_4:-22896019 | None:intergenic |
| CAACAAACTTGGGTGCGTTG+AGG | 0.603580 | 3_4:-22896120 | None:intergenic |
| ATTCTCATTGAAATTAAACT+GGG | 0.610494 | 3_4:+22899100 | Msa0494630:exon |
| TGACACATTGCAAGACAGTA+CGG | 0.610797 | 3_4:+22897402 | Msa0494630:CDS |
| GCAAAACAAGGAAGTTGCAA+AGG | 0.614584 | 3_4:+22898971 | Msa0494630:CDS |
| CACCGGAGAGAAGAGAGAGA+GGG | 0.617834 | 3_4:-22896023 | None:intergenic |
| GGTAAGGCTGAAAGGTTGGA+CGG | 0.619906 | 3_4:+22897682 | Msa0494630:CDS |
| TTGAAATGGGTAAGGCTGAA+AGG | 0.620447 | 3_4:+22897674 | Msa0494630:CDS |
| GTAAGGCTGAAAGGTTGGAC+GGG | 0.622984 | 3_4:+22897683 | Msa0494630:CDS |
| AGGGTTATCATGCAGGAGAG+AGG | 0.624181 | 3_4:+22898930 | Msa0494630:intron |
| TGCCAAAGCGTTCACCGGCG+AGG | 0.627171 | 3_4:-22897614 | None:intergenic |
| TTATCAGAAAATCTTCCAAG+TGG | 0.629968 | 3_4:+22897084 | Msa0494630:CDS |
| TTACATCACGTAACTCATAA+CGG | 0.631304 | 3_4:+22895911 | Msa0494630:five_prime_UTR |
| GGAGAATGTAAGGCAAAAGA+GGG | 0.637079 | 3_4:+22898415 | Msa0494630:CDS |
| TTATGAGTTACGTGATGTAA+CGG | 0.638825 | 3_4:-22895908 | None:intergenic |
| TGGGGAGAAGATGATGAAAG+GGG | 0.644916 | 3_4:-22897259 | None:intergenic |
| TAAAGAAGTTGAGCAAAACA+AGG | 0.647922 | 3_4:+22898959 | Msa0494630:CDS |
| GAAGAACCAGAACATGTCCA+AGG | 0.652026 | 3_4:-22899051 | None:intergenic |
| GAGTTACGTGATGTAACGGA+GGG | 0.661477 | 3_4:-22895904 | None:intergenic |
| CAATCACCCCAAAACAGCAG+AGG | 0.670196 | 3_4:+22896579 | Msa0494630:CDS |
| GCGGGTTCCATTGATCACAC+CGG | 0.670203 | 3_4:-22896040 | None:intergenic |
| TTGTGTAGTGAAGACTGTGA+AGG | 0.670213 | 3_4:-22895950 | None:intergenic |
| TGAGTTACGTGATGTAACGG+AGG | 0.681674 | 3_4:-22895905 | None:intergenic |
| GGAGAAGATGATGAAAGGGG+TGG | 0.706516 | 3_4:-22897256 | None:intergenic |
| ATTGTGCAGCAGACCTGATG+AGG | 0.708575 | 3_4:+22898364 | Msa0494630:intron |
| TGTGCATGAGAAGACCTCGC+CGG | 0.714268 | 3_4:+22897600 | Msa0494630:CDS |
| CACATTGCAAGACAGTACGG+AGG | 0.751329 | 3_4:+22897405 | Msa0494630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTTTGATTTTTATTAAT+TGG | + | chr3_4:22896480-22896499 | Msa0494630:intron | 10.0% |
| !!! | AGTTTTGATTTTTATTAATT+GGG | + | chr3_4:22896481-22896500 | Msa0494630:intron | 10.0% |
| !!! | ATAGTTTAGATTTTAATTAA+TGG | + | chr3_4:22896510-22896529 | Msa0494630:intron | 10.0% |
| !!! | TAGTTTAGATTTTAATTAAT+GGG | + | chr3_4:22896511-22896530 | Msa0494630:intron | 10.0% |
| !!! | TTTCTATTAATTTTTGTTTT+GGG | + | chr3_4:22897026-22897045 | Msa0494630:intron | 10.0% |
| !!! | ATATTTATAAAATTTTAGCT+AGG | + | chr3_4:22898753-22898772 | Msa0494630:intron | 10.0% |
| !!! | AAAGTTTGGATTTTTATTAA+TGG | + | chr3_4:22896397-22896416 | Msa0494630:intron | 15.0% |
| !!! | AAGTTTGGATTTTTATTAAT+GGG | + | chr3_4:22896398-22896417 | Msa0494630:intron | 15.0% |
| !!! | CTTTCTATTAATTTTTGTTT+TGG | + | chr3_4:22897025-22897044 | Msa0494630:intron | 15.0% |
| !!! | AGATTTTCTGATAAATAAAA+TGG | - | chr3_4:22897078-22897097 | None:intergenic | 15.0% |
| !!! | TTTAATATTTCTATAGAGAA+GGG | + | chr3_4:22897215-22897234 | Msa0494630:intron | 15.0% |
| !! | TAAAGAAACACAAATTATAA+GGG | - | chr3_4:22897754-22897773 | None:intergenic | 15.0% |
| !! | ATAAAGAAACACAAATTATA+AGG | - | chr3_4:22897755-22897774 | None:intergenic | 15.0% |
| !! | TATACAAAAATGATTAACAA+AGG | - | chr3_4:22898336-22898355 | None:intergenic | 15.0% |
| !! | TATGAATAGTTTAATCTTAT+AGG | - | chr3_4:22898556-22898575 | None:intergenic | 15.0% |
| !! | GATTAAACTATTCATATTTA+TGG | + | chr3_4:22898560-22898579 | Msa0494630:intron | 15.0% |
| !!! | ACAATTTATTGACAAATTTT+AGG | - | chr3_4:22899290-22899309 | None:intergenic | 15.0% |
| !!! | AATTTTGCATTTTTCTCAAT+TGG | + | chr3_4:22896232-22896251 | Msa0494630:intron | 20.0% |
| !!! | ATTTTGCATTTTTCTCAATT+GGG | + | chr3_4:22896233-22896252 | Msa0494630:intron | 20.0% |
| !!! | TAGATTGTATTTTTCTCAAT+TGG | + | chr3_4:22896284-22896303 | Msa0494630:intron | 20.0% |
| !!! | AGATTGTATTTTTCTCAATT+GGG | + | chr3_4:22896285-22896304 | Msa0494630:intron | 20.0% |
| !!! | AAGTTTGGATTTTTAGTAAT+TGG | + | chr3_4:22896315-22896334 | Msa0494630:intron | 20.0% |
| !!! | AGTTTGGATTTTTAGTAATT+GGG | + | chr3_4:22896316-22896335 | Msa0494630:intron | 20.0% |
| !!! | TATATTGCATTTTTCTCAAT+TGG | + | chr3_4:22896449-22896468 | Msa0494630:intron | 20.0% |
| !!! | ATATTGCATTTTTCTCAATT+GGG | + | chr3_4:22896450-22896469 | Msa0494630:intron | 20.0% |
| !! | AACAAAATTAGAAATGTAGT+AGG | - | chr3_4:22896648-22896667 | None:intergenic | 20.0% |
| !!! | ATAGTTTGAGCTTTTAATTA+TGG | + | chr3_4:22896672-22896691 | Msa0494630:intron | 20.0% |
| !! | AGTAACATAGGAAAAAAATT+GGG | - | chr3_4:22896755-22896774 | None:intergenic | 20.0% |
| !! | AAGTAACATAGGAAAAAAAT+TGG | - | chr3_4:22896756-22896775 | None:intergenic | 20.0% |
| !!! | TTTTCCTATGTTACTTTTTA+TGG | + | chr3_4:22896760-22896779 | Msa0494630:intron | 20.0% |
| !! | CAAAAAAACAGAAAAAACAA+AGG | - | chr3_4:22896840-22896859 | None:intergenic | 20.0% |
| !!! | GTTTAATATTTCTATAGAGA+AGG | + | chr3_4:22897214-22897233 | Msa0494630:intron | 20.0% |
| !! | AGTGAAACATTACAAATATT+CGG | + | chr3_4:22898141-22898160 | Msa0494630:intron | 20.0% |
| !! | GCATAACTTATACAAATTAT+TGG | + | chr3_4:22898169-22898188 | Msa0494630:intron | 20.0% |
| !! | ATAGTTTAATCTTATAGGTT+AGG | - | chr3_4:22898551-22898570 | None:intergenic | 20.0% |
| !! | AAACTATTTAATGTGTCAAT+TGG | + | chr3_4:22898784-22898803 | Msa0494630:intron | 20.0% |
| !!! | GCATTTTAGAAGATTATAAA+GGG | - | chr3_4:22898863-22898882 | None:intergenic | 20.0% |
| !!! | TGCATTTTAGAAGATTATAA+AGG | - | chr3_4:22898864-22898883 | None:intergenic | 20.0% |
| !! | ATTCTCATTGAAATTAAACT+GGG | + | chr3_4:22899100-22899119 | Msa0494630:exon | 20.0% |
| !! | CTATTTATATATTGTACTCA+TGG | + | chr3_4:22899167-22899186 | Msa0494630:three_prime_UTR | 20.0% |
| ! | GTAACATAGGAAAAAAATTG+GGG | - | chr3_4:22896754-22896773 | None:intergenic | 25.0% |
| ! | ACAACCATAAAAAGTAACAT+AGG | - | chr3_4:22896767-22896786 | None:intergenic | 25.0% |
| ! | AATCTGAATTTATCATCTTG+GGG | - | chr3_4:22897280-22897299 | None:intergenic | 25.0% |
| ! | GAATCTGAATTTATCATCTT+GGG | - | chr3_4:22897281-22897300 | None:intergenic | 25.0% |
| ! | TGAATCTGAATTTATCATCT+TGG | - | chr3_4:22897282-22897301 | None:intergenic | 25.0% |
| ! | ATTAACAAAGGAAATAGTAC+AGG | - | chr3_4:22898324-22898343 | None:intergenic | 25.0% |
| !! | ATGGATTATTTACAAGACAA+TGG | + | chr3_4:22898579-22898598 | Msa0494630:intron | 25.0% |
| !!! | AAAAGTATTACAATCTCTGA+TGG | + | chr3_4:22899014-22899033 | Msa0494630:CDS | 25.0% |
| ! | GATTCTCATTGAAATTAAAC+TGG | + | chr3_4:22899099-22899118 | Msa0494630:exon | 25.0% |
| ! | GTTTCAGATTCTTATATCAT+TGG | - | chr3_4:22899239-22899258 | None:intergenic | 25.0% |
| TTATGAGTTACGTGATGTAA+CGG | - | chr3_4:22895911-22895930 | None:intergenic | 30.0% | |
| TTACATCACGTAACTCATAA+CGG | + | chr3_4:22895911-22895930 | Msa0494630:five_prime_UTR | 30.0% | |
| !! | ATTTTTCCAATCGATTTTCG+CGG | - | chr3_4:22896062-22896081 | None:intergenic | 30.0% |
| TCGATTGGAAAAATCTAGAA+TGG | + | chr3_4:22896068-22896087 | Msa0494630:CDS | 30.0% | |
| !!! | TAGATTGCTTTTTTCTCAAC+TGG | + | chr3_4:22896367-22896386 | Msa0494630:intron | 30.0% |
| !!! | AGATTGCTTTTTTCTCAACT+GGG | + | chr3_4:22896368-22896387 | Msa0494630:intron | 30.0% |
| CAAGAATTGAAAACCTTGAA+AGG | - | chr3_4:22896625-22896644 | None:intergenic | 30.0% | |
| !! | TAGTTCTGAGCTTCTATTTA+TGG | + | chr3_4:22896792-22896811 | Msa0494630:intron | 30.0% |
| !!! | TTGGGTTTTTCCTTTTTTGA+AGG | + | chr3_4:22897044-22897063 | Msa0494630:intron | 30.0% |
| TTATCAGAAAATCTTCCAAG+TGG | + | chr3_4:22897084-22897103 | Msa0494630:CDS | 30.0% | |
| GATACAAGTACCTTCTAATT+TGG | - | chr3_4:22897113-22897132 | None:intergenic | 30.0% | |
| TCTCAAATTCCTATGGAAAA+AGG | - | chr3_4:22897156-22897175 | None:intergenic | 30.0% | |
| AGCAAAATCTCAAATTCCTA+TGG | - | chr3_4:22897163-22897182 | None:intergenic | 30.0% | |
| TGAAAACCAAAATCCGAATT+TGG | + | chr3_4:22897312-22897331 | Msa0494630:CDS | 30.0% | |
| AATTGAGGAGTAACCAAATT+CGG | - | chr3_4:22897328-22897347 | None:intergenic | 30.0% | |
| ! | GAAAGAGTTGATTTCAATGA+AGG | - | chr3_4:22897433-22897452 | None:intergenic | 30.0% |
| TCTGTGATTTGATTCAGAAT+AGG | - | chr3_4:22897481-22897500 | None:intergenic | 30.0% | |
| CGACACTTAAACTAAGATAA+CGG | - | chr3_4:22898042-22898061 | None:intergenic | 30.0% | |
| ACTTTCAAATTTCCCATCTA+AGG | - | chr3_4:22898124-22898143 | None:intergenic | 30.0% | |
| ATACAACTAAAGCAAAGAGT+TGG | - | chr3_4:22898223-22898242 | None:intergenic | 30.0% | |
| AAAGGAAATAGTACAGGAAT+TGG | - | chr3_4:22898318-22898337 | None:intergenic | 30.0% | |
| ATCCATCAATGAATCTCTTT+AGG | - | chr3_4:22898658-22898677 | None:intergenic | 30.0% | |
| GATTTCATGAACTGACATTA+AGG | + | chr3_4:22898675-22898694 | Msa0494630:intron | 30.0% | |
| TTTAATGTGTCAATTGGAAG+AGG | + | chr3_4:22898790-22898809 | Msa0494630:intron | 30.0% | |
| ! | CATTACTACTTCTCTAAAGA+GGG | - | chr3_4:22898887-22898906 | None:intergenic | 30.0% |
| TAAAGAAGTTGAGCAAAACA+AGG | + | chr3_4:22898959-22898978 | Msa0494630:CDS | 30.0% | |
| !!! | ATACTTTTGTTGTTTTGTGC+TGG | - | chr3_4:22899002-22899021 | None:intergenic | 30.0% |
| !!! | GGAGCAAAACTGTTTTATTT+AGG | + | chr3_4:22899188-22899207 | Msa0494630:three_prime_UTR | 30.0% |
| !!! | ACAAATTTTAGGTTCAGTAC+AGG | - | chr3_4:22899279-22899298 | None:intergenic | 30.0% |
| !! | TTTTTCCAATCGATTTTCGC+GGG | - | chr3_4:22896061-22896080 | None:intergenic | 35.0% |
| GACAAGAAGTCAACAAACTT+GGG | - | chr3_4:22896133-22896152 | None:intergenic | 35.0% | |
| !! | GTTGTTGGTGTTATGATTGA+GGG | - | chr3_4:22896155-22896174 | None:intergenic | 35.0% |
| !! | TGTTGTTGGTGTTATGATTG+AGG | - | chr3_4:22896156-22896175 | None:intergenic | 35.0% |
| AGCTTCATCATCATTGTTGT+TGG | - | chr3_4:22896170-22896189 | None:intergenic | 35.0% | |
| ! | ACAACAATGATGATGAAGCT+TGG | + | chr3_4:22896170-22896189 | Msa0494630:CDS | 35.0% |
| CAATTGGGTTTGTCAAAGTT+TGG | + | chr3_4:22896300-22896319 | Msa0494630:intron | 35.0% | |
| !! | CAACTGGGTTTGTTAAAGTT+TGG | + | chr3_4:22896383-22896402 | Msa0494630:intron | 35.0% |
| !!! | AGAAAATCCTCTGCTGTTTT+GGG | - | chr3_4:22896589-22896608 | None:intergenic | 35.0% |
| TTGAAAACCTTGAAAGGACT+TGG | - | chr3_4:22896619-22896638 | None:intergenic | 35.0% | |
| !!! | TGCTAGTTTTCAACTTTAGC+TGG | + | chr3_4:22896704-22896723 | Msa0494630:intron | 35.0% |
| TTGTTCTCAGCTTCTAACTT+TGG | + | chr3_4:22896969-22896988 | Msa0494630:intron | 35.0% | |
| ! | ACACACTTTCCTTTTTCCAT+AGG | + | chr3_4:22897144-22897163 | Msa0494630:intron | 35.0% |
| AGAAGGGAAAATCAAGAGAA+GGG | + | chr3_4:22897231-22897250 | Msa0494630:CDS | 35.0% | |
| ! | GAGTAACCAAATTCGGATTT+TGG | - | chr3_4:22897321-22897340 | None:intergenic | 35.0% |
| TCCTCAATTTAAGTCCAAGA+AGG | + | chr3_4:22897339-22897358 | Msa0494630:CDS | 35.0% | |
| !! | CGAAGAATTTGTTTTCGAGA+CGG | + | chr3_4:22897455-22897474 | Msa0494630:CDS | 35.0% |
| CTGCAATGAATTGAAGAGAT+TGG | + | chr3_4:22897504-22897523 | Msa0494630:CDS | 35.0% | |
| CTTCTTCTTTACTCTCTACA+GGG | - | chr3_4:22897570-22897589 | None:intergenic | 35.0% | |
| TCTTCTTCTTTACTCTCTAC+AGG | - | chr3_4:22897571-22897590 | None:intergenic | 35.0% | |
| TGTAGAGAGTAAAGAAGAAG+AGG | + | chr3_4:22897570-22897589 | Msa0494630:CDS | 35.0% | |
| TGGATAGAAGAGAGAAAGAA+AGG | + | chr3_4:22897641-22897660 | Msa0494630:CDS | 35.0% | |
| AAGGAAACCATTGCTTGAAA+TGG | + | chr3_4:22897660-22897679 | Msa0494630:CDS | 35.0% | |
| AGGAAACCATTGCTTGAAAT+GGG | + | chr3_4:22897661-22897680 | Msa0494630:CDS | 35.0% | |
| TTTACGATCGAAATCGATGT+AGG | + | chr3_4:22897855-22897874 | Msa0494630:intron | 35.0% | |
| TTCTCCAAGTCAAGAGTTAT+AGG | - | chr3_4:22898401-22898420 | None:intergenic | 35.0% | |
| AGCCTAAAGAGATTCATTGA+TGG | + | chr3_4:22898653-22898672 | Msa0494630:intron | 35.0% | |
| TCTGATAGACCCCTTAATAT+GGG | - | chr3_4:22898708-22898727 | None:intergenic | 35.0% | |
| TTCTGATAGACCCCTTAATA+TGG | - | chr3_4:22898709-22898728 | None:intergenic | 35.0% | |
| ! | CCATTACTACTTCTCTAAAG+AGG | - | chr3_4:22898888-22898907 | None:intergenic | 35.0% |
| ! | CCTCTTTAGAGAAGTAGTAA+TGG | + | chr3_4:22898885-22898904 | Msa0494630:intron | 35.0% |
| ! | TGAAAAGAGATCTGATGATG+AGG | + | chr3_4:22898910-22898929 | Msa0494630:intron | 35.0% |
| ! | GAAAAGAGATCTGATGATGA+GGG | + | chr3_4:22898911-22898930 | Msa0494630:intron | 35.0% |
| TTGTGTAGTGAAGACTGTGA+AGG | - | chr3_4:22895953-22895972 | None:intergenic | 40.0% | |
| GGACAAGAAGTCAACAAACT+TGG | - | chr3_4:22896134-22896153 | None:intergenic | 40.0% | |
| ! | ACCTGGTCAGTTTTCTCAAT+TGG | + | chr3_4:22896201-22896220 | Msa0494630:intron | 40.0% |
| ! | CCTGGTCAGTTTTCTCAATT+GGG | + | chr3_4:22896202-22896221 | Msa0494630:intron | 40.0% |
| !!! | GAAAATCCTCTGCTGTTTTG+GGG | - | chr3_4:22896588-22896607 | None:intergenic | 40.0% |
| !! | GAGAAAATCCTCTGCTGTTT+TGG | - | chr3_4:22896590-22896609 | None:intergenic | 40.0% |
| GGACTTCTTGCCTTCAAAAA+AGG | - | chr3_4:22897057-22897076 | None:intergenic | 40.0% | |
| CTTCTAATTTGGTCACCACT+TGG | - | chr3_4:22897102-22897121 | None:intergenic | 40.0% | |
| CAAGTGGTGACCAAATTAGA+AGG | + | chr3_4:22897100-22897119 | Msa0494630:CDS | 40.0% | |
| GAGAAGGGAAAATCAAGAGA+AGG | + | chr3_4:22897230-22897249 | Msa0494630:intron | 40.0% | |
| TTGGGGAGAAGATGATGAAA+GGG | - | chr3_4:22897263-22897282 | None:intergenic | 40.0% | |
| GCCTTCTTGGACTTAAATTG+AGG | - | chr3_4:22897343-22897362 | None:intergenic | 40.0% | |
| TGACTTGATCAAAGCCTTCT+TGG | - | chr3_4:22897356-22897375 | None:intergenic | 40.0% | |
| TGACACATTGCAAGACAGTA+CGG | + | chr3_4:22897402-22897421 | Msa0494630:CDS | 40.0% | |
| AGAGATTGGCATTAAGAGCT+AGG | + | chr3_4:22897518-22897537 | Msa0494630:CDS | 40.0% | |
| GAGATTGGCATTAAGAGCTA+GGG | + | chr3_4:22897519-22897538 | Msa0494630:CDS | 40.0% | |
| ACCATTGCTTGAAATGGGTA+AGG | + | chr3_4:22897666-22897685 | Msa0494630:CDS | 40.0% | |
| TTGAAATGGGTAAGGCTGAA+AGG | + | chr3_4:22897674-22897693 | Msa0494630:CDS | 40.0% | |
| ! | ACACTGACACTTTAGTTCGA+AGG | + | chr3_4:22897927-22897946 | Msa0494630:intron | 40.0% |
| ATGTCTAACACCGACACATT+CGG | + | chr3_4:22897977-22897996 | Msa0494630:intron | 40.0% | |
| GTAAAACACTGACACTGGTA+TGG | - | chr3_4:22898075-22898094 | None:intergenic | 40.0% | |
| ! | TACCAGTGTCAGTGTTTTAC+AGG | + | chr3_4:22898075-22898094 | Msa0494630:intron | 40.0% |
| AACCTGTAAAACACTGACAC+TGG | - | chr3_4:22898080-22898099 | None:intergenic | 40.0% | |
| ! | CAGTGTTTTACAGGTTGCTA+AGG | + | chr3_4:22898084-22898103 | Msa0494630:intron | 40.0% |
| ! | GTTTTACAGGTTGCTAAGGT+AGG | + | chr3_4:22898088-22898107 | Msa0494630:intron | 40.0% |
| CATGCCTATAACTCTTGACT+TGG | + | chr3_4:22898394-22898413 | Msa0494630:CDS | 40.0% | |
| !! | CTCTTGACTTGGAGAATGTA+AGG | + | chr3_4:22898405-22898424 | Msa0494630:CDS | 40.0% |
| TGGAGAATGTAAGGCAAAAG+AGG | + | chr3_4:22898414-22898433 | Msa0494630:CDS | 40.0% | |
| GGAGAATGTAAGGCAAAAGA+GGG | + | chr3_4:22898415-22898434 | Msa0494630:CDS | 40.0% | |
| AATAACCCTAACCCCTCAAA+AGG | + | chr3_4:22898500-22898519 | Msa0494630:CDS | 40.0% | |
| AAGGTAGTTGCCCCATATTA+AGG | + | chr3_4:22898694-22898713 | Msa0494630:intron | 40.0% | |
| AGGTAGTTGCCCCATATTAA+GGG | + | chr3_4:22898695-22898714 | Msa0494630:intron | 40.0% | |
| CTGATAGACCCCTTAATATG+GGG | - | chr3_4:22898707-22898726 | None:intergenic | 40.0% | |
| GCAAAACAAGGAAGTTGCAA+AGG | + | chr3_4:22898971-22898990 | Msa0494630:CDS | 40.0% | |
| TGGAAGAGAAACAAAAGCCT+TGG | + | chr3_4:22899034-22899053 | Msa0494630:CDS | 40.0% | |
| !! | CAGCTTGATAATGTTGTGCA+AGG | - | chr3_4:22899080-22899099 | None:intergenic | 40.0% |
| ! | GAGTTACGTGATGTAACGGA+GGG | - | chr3_4:22895907-22895926 | None:intergenic | 45.0% |
| TGAGTTACGTGATGTAACGG+AGG | - | chr3_4:22895908-22895927 | None:intergenic | 45.0% | |
| !!! | GAAGCTTGGTTTTGCAAACC+TGG | + | chr3_4:22896184-22896203 | Msa0494630:CDS | 45.0% |
| CCCAATTGAGAAAACTGACC+AGG | - | chr3_4:22896205-22896224 | None:intergenic | 45.0% | |
| CAGATCACCAAGTCCTTTCA+AGG | + | chr3_4:22896609-22896628 | Msa0494630:CDS | 45.0% | |
| TGGGGAGAAGATGATGAAAG+GGG | - | chr3_4:22897262-22897281 | None:intergenic | 45.0% | |
| CTTGGGGAGAAGATGATGAA+AGG | - | chr3_4:22897264-22897283 | None:intergenic | 45.0% | |
| GCCTTACCCATTTCAAGCAA+TGG | - | chr3_4:22897670-22897689 | None:intergenic | 45.0% | |
| AATGGGTAAGGCTGAAAGGT+TGG | + | chr3_4:22897678-22897697 | Msa0494630:CDS | 45.0% | |
| TTGGACGGGATGTGTGTTAA+AGG | + | chr3_4:22897697-22897716 | Msa0494630:CDS | 45.0% | |
| TGGACGGGATGTGTGTTAAA+GGG | + | chr3_4:22897698-22897717 | Msa0494630:CDS | 45.0% | |
| ! | TCGAAGGCACATCTTAAGTC+TGG | + | chr3_4:22897943-22897962 | Msa0494630:intron | 45.0% |
| TGTCTAACACCGACACATTC+GGG | + | chr3_4:22897978-22897997 | Msa0494630:intron | 45.0% | |
| ATGTAACCACCCGAATGTGT+CGG | - | chr3_4:22897990-22898009 | None:intergenic | 45.0% | |
| ACTGACACTGGTATGGACAT+TGG | - | chr3_4:22898068-22898087 | None:intergenic | 45.0% | |
| GTTGCTAAGGTAGGCAATCT+AGG | + | chr3_4:22898097-22898116 | Msa0494630:intron | 45.0% | |
| AGGCAATCTAGGTCCTTAGA+TGG | + | chr3_4:22898108-22898127 | Msa0494630:intron | 45.0% | |
| GGCAATCTAGGTCCTTAGAT+GGG | + | chr3_4:22898109-22898128 | Msa0494630:intron | 45.0% | |
| GAAAAACACTGAGGAGAAGG+AGG | - | chr3_4:22898470-22898489 | None:intergenic | 45.0% | |
| GCAGAAAAACACTGAGGAGA+AGG | - | chr3_4:22898473-22898492 | None:intergenic | 45.0% | |
| ! | TCTCCTCAGTGTTTTTCTGC+TGG | + | chr3_4:22898473-22898492 | Msa0494630:CDS | 45.0% |
| ! | CTCCTCAGTGTTTTTCTGCT+GGG | + | chr3_4:22898474-22898493 | Msa0494630:CDS | 45.0% |
| !! | TGGAACCTTTTGAGGGGTTA+GGG | - | chr3_4:22898508-22898527 | None:intergenic | 45.0% |
| GTTAGGACATACCATTAGCC+GGG | - | chr3_4:22898534-22898553 | None:intergenic | 45.0% | |
| GGTTAGGACATACCATTAGC+CGG | - | chr3_4:22898535-22898554 | None:intergenic | 45.0% | |
| GGTAGTTGCCCCATATTAAG+GGG | + | chr3_4:22898696-22898715 | Msa0494630:intron | 45.0% | |
| GATGATGAGGGTTATCATGC+AGG | + | chr3_4:22898923-22898942 | Msa0494630:intron | 45.0% | |
| CAAAAGCCTTGGACATGTTC+TGG | + | chr3_4:22899045-22899064 | Msa0494630:CDS | 45.0% | |
| GAAGAACCAGAACATGTCCA+AGG | - | chr3_4:22899054-22899073 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr3_4:22895978-22895997 | None:intergenic | 50.0% | |
| CTTCTCTCCGGTGTGATCAA+TGG | + | chr3_4:22896033-22896052 | Msa0494630:exon | 50.0% | |
| TGGAACCCGCGAAAATCGAT+TGG | + | chr3_4:22896053-22896072 | Msa0494630:CDS | 50.0% | |
| CAACAAACTTGGGTGCGTTG+AGG | - | chr3_4:22896123-22896142 | None:intergenic | 50.0% | |
| CAATCACCCCAAAACAGCAG+AGG | + | chr3_4:22896579-22896598 | Msa0494630:CDS | 50.0% | |
| GGAGAAGATGATGAAAGGGG+TGG | - | chr3_4:22897259-22897278 | None:intergenic | 50.0% | |
| CACATTGCAAGACAGTACGG+AGG | + | chr3_4:22897405-22897424 | Msa0494630:CDS | 50.0% | |
| ! | AACTCTGCCAAAGCGTTCAC+CGG | - | chr3_4:22897622-22897641 | None:intergenic | 50.0% |
| GGTAAGGCTGAAAGGTTGGA+CGG | + | chr3_4:22897682-22897701 | Msa0494630:CDS | 50.0% | |
| GTAAGGCTGAAAGGTTGGAC+GGG | + | chr3_4:22897683-22897702 | Msa0494630:CDS | 50.0% | |
| GATGTAGGACGTACGACGTA+CGG | + | chr3_4:22897870-22897889 | Msa0494630:intron | 50.0% | |
| ATTGTGCAGCAGACCTGATG+AGG | + | chr3_4:22898364-22898383 | Msa0494630:intron | 50.0% | |
| ! | GGCATGTTTTCTGCCTCATC+AGG | - | chr3_4:22898380-22898399 | None:intergenic | 50.0% |
| AGCCCAGCAGAAAAACACTG+AGG | - | chr3_4:22898479-22898498 | None:intergenic | 50.0% | |
| !! | CTGGAACCTTTTGAGGGGTT+AGG | - | chr3_4:22898509-22898528 | None:intergenic | 50.0% |
| !! | GGGATCTGGAACCTTTTGAG+GGG | - | chr3_4:22898514-22898533 | None:intergenic | 50.0% |
| !! | CGGGATCTGGAACCTTTTGA+GGG | - | chr3_4:22898515-22898534 | None:intergenic | 50.0% |
| CCTCAAAAGGTTCCAGATCC+CGG | + | chr3_4:22898513-22898532 | Msa0494630:CDS | 50.0% | |
| ACATACCATTAGCCGGGATC+TGG | - | chr3_4:22898528-22898547 | None:intergenic | 50.0% | |
| AGGGTTATCATGCAGGAGAG+AGG | + | chr3_4:22898930-22898949 | Msa0494630:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGG+TGG | - | chr3_4:22895977-22895996 | None:intergenic | 55.0% | |
| GGAGAGAAGAGAGAGAGGGA+GGG | - | chr3_4:22896022-22896041 | None:intergenic | 55.0% | |
| CTCCCTCTCTCTCTTCTCTC+CGG | + | chr3_4:22896021-22896040 | Msa0494630:five_prime_UTR | 55.0% | |
| CACCGGAGAGAAGAGAGAGA+GGG | - | chr3_4:22896026-22896045 | None:intergenic | 55.0% | |
| ACACCGGAGAGAAGAGAGAG+AGG | - | chr3_4:22896027-22896046 | None:intergenic | 55.0% | |
| GCGGGTTCCATTGATCACAC+CGG | - | chr3_4:22896043-22896062 | None:intergenic | 55.0% | |
| TGTGCATGAGAAGACCTCGC+CGG | + | chr3_4:22897600-22897619 | Msa0494630:CDS | 55.0% | |
| GGTGAACGCTTTGGCAGAGT+TGG | + | chr3_4:22897621-22897640 | Msa0494630:CDS | 55.0% | |
| CTAACACCGACACATTCGGG+TGG | + | chr3_4:22897981-22898000 | Msa0494630:intron | 55.0% | |
| !! | CCGGGATCTGGAACCTTTTG+AGG | - | chr3_4:22898516-22898535 | None:intergenic | 55.0% |
| AGGTTCCAGATCCCGGCTAA+TGG | + | chr3_4:22898520-22898539 | Msa0494630:CDS | 55.0% | |
| CGGAGAGAAGAGAGAGAGGG+AGG | - | chr3_4:22896023-22896042 | None:intergenic | 60.0% | |
| GACCTCGCCGGTGAACGCTT+TGG | + | chr3_4:22897612-22897631 | Msa0494630:CDS | 65.0% | |
| ! | TGCCAAAGCGTTCACCGGCG+AGG | - | chr3_4:22897617-22897636 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 22895895 | 22899324 | 22895895 | ID=Msa0494630;Name=Msa0494630 |
| chr3_4 | mRNA | 22895895 | 22899324 | 22895895 | ID=Msa0494630-mRNA-1;Parent=Msa0494630;Name=Msa0494630-mRNA-1;_AED=0.02;_eAED=0.02;_QI=157|1|1|1|1|1|6|224|365 |
| chr3_4 | exon | 22895895 | 22896205 | 22895895 | ID=Msa0494630-mRNA-1:exon:5676;Parent=Msa0494630-mRNA-1 |
| chr3_4 | exon | 22896575 | 22896630 | 22896575 | ID=Msa0494630-mRNA-1:exon:5677;Parent=Msa0494630-mRNA-1 |
| chr3_4 | exon | 22897066 | 22897121 | 22897066 | ID=Msa0494630-mRNA-1:exon:5678;Parent=Msa0494630-mRNA-1 |
| chr3_4 | exon | 22897231 | 22897737 | 22897231 | ID=Msa0494630-mRNA-1:exon:5679;Parent=Msa0494630-mRNA-1 |
| chr3_4 | exon | 22898373 | 22898541 | 22898373 | ID=Msa0494630-mRNA-1:exon:5680;Parent=Msa0494630-mRNA-1 |
| chr3_4 | exon | 22898945 | 22899324 | 22898945 | ID=Msa0494630-mRNA-1:exon:5681;Parent=Msa0494630-mRNA-1 |
| chr3_4 | five_prime_UTR | 22895895 | 22896051 | 22895895 | ID=Msa0494630-mRNA-1:five_prime_utr;Parent=Msa0494630-mRNA-1 |
| chr3_4 | CDS | 22896052 | 22896205 | 22896052 | ID=Msa0494630-mRNA-1:cds;Parent=Msa0494630-mRNA-1 |
| chr3_4 | CDS | 22896575 | 22896630 | 22896575 | ID=Msa0494630-mRNA-1:cds;Parent=Msa0494630-mRNA-1 |
| chr3_4 | CDS | 22897066 | 22897121 | 22897066 | ID=Msa0494630-mRNA-1:cds;Parent=Msa0494630-mRNA-1 |
| chr3_4 | CDS | 22897231 | 22897737 | 22897231 | ID=Msa0494630-mRNA-1:cds;Parent=Msa0494630-mRNA-1 |
| chr3_4 | CDS | 22898373 | 22898541 | 22898373 | ID=Msa0494630-mRNA-1:cds;Parent=Msa0494630-mRNA-1 |
| chr3_4 | CDS | 22898945 | 22899100 | 22898945 | ID=Msa0494630-mRNA-1:cds;Parent=Msa0494630-mRNA-1 |
| chr3_4 | three_prime_UTR | 22899101 | 22899324 | 22899101 | ID=Msa0494630-mRNA-1:three_prime_utr;Parent=Msa0494630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
