AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0622920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622920 MtrunA17_Chr8g0377891 90.831 1167 99 3 48 1208 1 1165 0.0 2100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622920 AT3G23740.1 33.724 341 179 9 895 1209 242 561 5.43e-37 148

Find 274 sgRNAs with CRISPR-Local

Find 429 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGCTGAAATTTCTGAATT+AGG 0.116328 4_2:-75654965 Msa0622920:CDS
TTATTTCTCTTATGGGCTTT+GGG 0.192646 4_2:+75653645 None:intergenic
TCTTGGAAAGATGGCAATTT+TGG 0.194696 4_2:+75652880 None:intergenic
AGTGCTTTCTTGAGTGTTTC+TGG 0.194856 4_2:+75653683 None:intergenic
GGCAACTACTTCCAGGTATT+TGG 0.200105 4_2:+75650108 None:intergenic
GATCGGGAAGTAGCTGAATT+AGG 0.204752 4_2:-75655034 Msa0622920:CDS
TGAGTGGATTATTTCTCTTA+TGG 0.204932 4_2:+75653637 None:intergenic
TTGGGAAGATTCTTAAAATA+TGG 0.218302 4_2:+75653244 None:intergenic
ATTATTTCTCTTATGGGCTT+TGG 0.233144 4_2:+75653644 None:intergenic
CGACAACATCCAGGTGTTTC+AGG 0.234770 4_2:+75651449 None:intergenic
ATCCAAAAGCTTCTGAAGTT+TGG 0.240513 4_2:+75651811 None:intergenic
CTTCTGAATGGCCTAGTTAA+TGG 0.242037 4_2:-75652313 Msa0622920:CDS
CAGCTGAAATTTCTGAATTA+GGG 0.242152 4_2:-75654964 Msa0622920:CDS
GTTACATCGTTTCCACAAAA+AGG 0.243243 4_2:+75655259 None:intergenic
CCCCAAACTTCAGAAGCTTT+TGG 0.244143 4_2:-75651813 Msa0622920:CDS
TCTTCAGCATCTAACATATT+AGG 0.253871 4_2:+75652499 None:intergenic
ATCAGCTTCCCGTGCAAATA+TGG 0.256177 4_2:+75653304 None:intergenic
TGTCAACGACACTCCTCTTT+TGG 0.257812 4_2:-75651171 Msa0622920:CDS
CAACTATCAATCTTAGTTTC+AGG 0.258328 4_2:+75654092 None:intergenic
TGCAAGTTTGAATCTGAAAT+TGG 0.260828 4_2:+75651773 None:intergenic
GCTCCGTCGGTTCTGGAAAA+TGG 0.277936 4_2:-75655004 Msa0622920:CDS
GAGTGGATTATTTCTCTTAT+GGG 0.278982 4_2:+75653638 None:intergenic
AAATCTCTATGAACAGAAAT+TGG 0.285206 4_2:+75651560 None:intergenic
GATTTACCAGTCACACCTTT+AGG 0.298769 4_2:-75651542 Msa0622920:CDS
TCCAAAAGCTTCTGAAGTTT+GGG 0.301497 4_2:+75651812 None:intergenic
TGATTTAGACTCTGAGCTTC+AGG 0.305858 4_2:+75652529 None:intergenic
CGTTCCGTTTGCGGGAATTT+CGG 0.308084 4_2:+75655464 None:intergenic
TCTGCTCTGCTCTGCTGCTT+TGG 0.314647 4_2:+75655504 None:intergenic
GTGGTTACCATAGTCATCTT+TGG 0.316172 4_2:+75653225 None:intergenic
GTCTCGAAATGTGTGAAAAT+TGG 0.319382 4_2:+75655526 None:intergenic
TCCGAACAGAAATTGTTTCT+AGG 0.321079 4_2:-75650161 Msa0622920:three_prime_UTR
CAAGCTGTCAGATGAAGATT+TGG 0.331421 4_2:-75654834 Msa0622920:CDS
TTATCTTGTAGTTGAGATCT+TGG 0.337870 4_2:+75651632 None:intergenic
AGATCGGACGTTCCGTTTGC+GGG 0.338738 4_2:+75655456 None:intergenic
TTGATCTGTGACTTTCATTT+CGG 0.339926 4_2:+75651418 None:intergenic
CAAAGCCCTCTGCATCCTCT+TGG 0.342184 4_2:+75651347 None:intergenic
GTCAAATTGTATTGGCAATT+CGG 0.344690 4_2:+75652852 None:intergenic
CAATCATTTGAATCACTTCC+AGG 0.354354 4_2:+75651743 None:intergenic
GAAATTTCTGAATTAGGGTT+TGG 0.356119 4_2:-75654959 Msa0622920:CDS
GGTGATAGTACAGGAAATTC+TGG 0.363890 4_2:-75651710 Msa0622920:CDS
AAAAGGAAGCAATAACAAAA+AGG 0.364259 4_2:-75652275 Msa0622920:CDS
CGAATTTATTCCCCACTTGC+CGG 0.365212 4_2:-75655070 Msa0622920:CDS
TCTGAGGTATGCTCTGCATT+TGG 0.369214 4_2:+75653727 None:intergenic
TCATGACAATGACCCAATTT+CGG 0.374046 4_2:+75654185 None:intergenic
TCATGAAGACAAGAAGGTTA+TGG 0.374927 4_2:-75654168 Msa0622920:CDS
ATTCAATTACAAAAGGCTAA+TGG 0.376627 4_2:-75654468 Msa0622920:CDS
AGCAAACATAAAACGAAAAG+TGG 0.377281 4_2:+75650015 None:intergenic
CAAGAAGGTTATGGGAGGTC+AGG 0.382245 4_2:-75654159 Msa0622920:CDS
ATCGGGAAGTAGCTGAATTA+GGG 0.382557 4_2:-75655033 Msa0622920:CDS
TCTTGAAACGGAACTTGAAC+CGG 0.382730 4_2:+75655310 None:intergenic
TTCCGAATCTGAAAGTCCTT+TGG 0.386134 4_2:+75655237 None:intergenic
AAGAAAGCAGTTTGTGAGTC+TGG 0.393914 4_2:-75652581 Msa0622920:CDS
TTCAGATCGTGTTGAGGAAA+AGG 0.395076 4_2:-75650238 Msa0622920:CDS
ACTTGAACCGGAACTGAGTA+TGG 0.396740 4_2:+75655322 None:intergenic
CAAAGTTGACTTGAATACTT+TGG 0.397446 4_2:-75652953 Msa0622920:CDS
TTCAGGTGATTTCTCCCTGT+TGG 0.398168 4_2:+75651466 None:intergenic
TATCTTGTAGTTGAGATCTT+GGG 0.399426 4_2:+75651633 None:intergenic
AGCTCAGAGTCTAAATCAAT+TGG 0.402575 4_2:-75652524 Msa0622920:CDS
CAAAACACCAAGCTGCTCTA+AGG 0.402756 4_2:+75653815 None:intergenic
CATGAAGACAAGAAGGTTAT+GGG 0.402943 4_2:-75654167 Msa0622920:CDS
GTACACCTGCCTTGTCCAAC+AGG 0.404686 4_2:-75651481 Msa0622920:CDS
ATACTTCCTTCATAAGGTCT+TGG 0.405275 4_2:+75651234 None:intergenic
TTTATAGGAATACCGAAATT+GGG 0.406959 4_2:-75654197 Msa0622920:intron
TACAGGTACATCTGGTGATC+AGG 0.410151 4_2:-75653094 Msa0622920:intron
CCTACATAGATGACATCATT+AGG 0.410798 4_2:+75654785 None:intergenic
AAAGCCCTCTGCATCCTCTT+GGG 0.411441 4_2:+75651348 None:intergenic
CGAAGATGACGATCTTGTTA+AGG 0.411660 4_2:-75655164 Msa0622920:CDS
TTAAGCAAGATTCTTTCAAC+AGG 0.411745 4_2:-75653881 Msa0622920:CDS
AAAGGAGTTCTCGAGATAGT+AGG 0.415123 4_2:+75651589 None:intergenic
CAAAAGGCTAATGGATGCTA+TGG 0.417412 4_2:-75654459 Msa0622920:CDS
CTCCTATAGTTGACTGAACC+AGG 0.418077 4_2:+75653274 None:intergenic
GAATCTGAAATTGGCAGAAA+TGG 0.419728 4_2:+75651782 None:intergenic
GAGTGAATCAAAGGTGGATC+TGG 0.420859 4_2:-75653958 Msa0622920:CDS
TGTTTCAGATGCTTTCCTGC+AGG 0.422230 4_2:+75650427 None:intergenic
TGGTTACCATAGTCATCTTT+GGG 0.422943 4_2:+75653226 None:intergenic
ACTTGAAACGGAACTTGAAC+CGG 0.426123 4_2:+75655366 None:intergenic
TACTTCCTTCATAAGGTCTT+GGG 0.428201 4_2:+75651235 None:intergenic
GATGCTATGGGAGATAATTT+CGG 0.429372 4_2:-75654446 Msa0622920:intron
ACAATTTGACGCAAAAGAAA+TGG 0.430175 4_2:-75652839 Msa0622920:CDS
AATCTTCCCAAAGATGACTA+TGG 0.436351 4_2:-75653232 Msa0622920:intron
CCACCATGTGTTGCAGTGTC+TGG 0.438116 4_2:+75652352 None:intergenic
TTTGCTGCGGGAACTTGAAA+CGG 0.438266 4_2:+75655354 None:intergenic
ATTTCAGTATCACGGGTCAT+TGG 0.439277 4_2:+75653777 None:intergenic
GTGTTTCTGGTCAGATCCAT+AGG 0.442538 4_2:+75653696 None:intergenic
TGTTAAGATCATCATTCATC+TGG 0.443214 4_2:+75650378 None:intergenic
TTCAAATGATTGTGATCCTA+TGG 0.444913 4_2:-75651732 Msa0622920:CDS
TTCTAGGAGTGGAACACATC+AGG 0.445762 4_2:-75650145 Msa0622920:three_prime_UTR
TGATACCAATGGGCCAGAAC+TGG 0.447913 4_2:-75654060 Msa0622920:CDS
ATGAGGCGGGTGGCGGAGAT+CGG 0.451393 4_2:+75655440 None:intergenic
TCCTAGAAACAATTTCTGTT+CGG 0.452318 4_2:+75650160 None:intergenic
TTCTCCCTGTTGGACAAGGC+AGG 0.452781 4_2:+75651476 None:intergenic
GAATCAACCATACTCAGTTC+CGG 0.453096 4_2:-75655329 Msa0622920:CDS
CCGGCGCCGGCGATTCTGAT+CGG 0.453266 4_2:-75655051 Msa0622920:CDS
AAGGTCTTGGGCAACCTCTT+CGG 0.453280 4_2:+75651247 None:intergenic
ATTGGTGAAGATGCCAGTTC+TGG 0.453428 4_2:+75654047 None:intergenic
AATGTGGATGAGGCGGGTGG+CGG 0.453864 4_2:+75655433 None:intergenic
GGTTCTCACCGGTGTAGTAT+TGG 0.455125 4_2:+75652216 None:intergenic
TATTCCCCACTTGCCGGCGC+CGG 0.457589 4_2:-75655064 Msa0622920:CDS
CGGCGCCGGCGATTCTGATC+GGG 0.457703 4_2:-75655050 Msa0622920:CDS
TCGCCTCGCACGGAGGTCCT+TGG 0.459092 4_2:+75655090 None:intergenic
TTGGCAATTCGGAGGAGTCT+TGG 0.461511 4_2:+75652863 None:intergenic
CTAACAACATGTTTCTGAGA+TGG 0.462834 4_2:+75651210 None:intergenic
GTGACAACTTGATCAGCTAT+AGG 0.464581 4_2:+75651518 None:intergenic
TTTGAGATGGCAAAGGAAGT+TGG 0.468342 4_2:+75653028 None:intergenic
CAAATGCTCTTTCTGCATGA+AGG 0.468866 4_2:+75651297 None:intergenic
GTACCCGCTCCGGTCAGATC+TGG 0.470465 4_2:-75655390 Msa0622920:CDS
GAGATCGGACGTTCCGTTTG+CGG 0.472640 4_2:+75655455 None:intergenic
CTTAACAAGATCGTCATCTT+CGG 0.472983 4_2:+75655165 None:intergenic
AGTACCAGGCAACTACTTCC+AGG 0.473034 4_2:+75650101 None:intergenic
CAGGTTCATTCAATTACAAA+AGG 0.473778 4_2:-75654475 Msa0622920:CDS
CCGATCAGAATCGCCGGCGC+CGG 0.477749 4_2:+75655051 None:intergenic
TTTCTGGGTGCTAGAGATGT+TGG 0.478007 4_2:-75653927 Msa0622920:CDS
TTGAAATTGTTCAAAGCCCC+AGG 0.478616 4_2:-75654494 Msa0622920:CDS
TAACAACATGTTTCTGAGAT+GGG 0.479696 4_2:+75651211 None:intergenic
ACCTCAGAATGTCAAACCTA+TGG 0.482063 4_2:-75653712 Msa0622920:CDS
AAAGCTCACCGTACCCGCTC+CGG 0.482065 4_2:-75655400 Msa0622920:CDS
TTCTCAGTATCTACTTGCAT+TGG 0.482411 4_2:+75654029 None:intergenic
CCTAATGATGTCATCTATGT+AGG 0.488989 4_2:-75654785 Msa0622920:CDS
TCAAACTTGCAAGTAACTCC+TGG 0.489368 4_2:-75651761 Msa0622920:CDS
TTCGGATGATAGATAATGTA+AGG 0.491626 4_2:+75650178 None:intergenic
AATCTTATCACACACCATTA+CGG 0.491836 4_2:+75652714 None:intergenic
GATGGGATACTTCCTTCATA+AGG 0.492449 4_2:+75651228 None:intergenic
CGCTCCGGTCAGATCTGGTC+CGG 0.495780 4_2:-75655385 Msa0622920:CDS
CTTACATGTTTGCTCTTGAG+TGG 0.497544 4_2:+75653621 None:intergenic
AAGCTGTCAGATGAAGATTT+GGG 0.498032 4_2:-75654833 Msa0622920:CDS
CGGGTGAATGTGGATGAGGC+GGG 0.499168 4_2:+75655427 None:intergenic
AACCAAAGGACTTTCAGATT+CGG 0.499438 4_2:-75655239 Msa0622920:CDS
AACAGGAACGGGAACGGAAG+AGG 0.499995 4_2:+75655282 None:intergenic
CGATCTGAAAACTTAACACT+TGG 0.500039 4_2:+75650252 None:intergenic
ACCTGACTTCCATCCAAAAG+AGG 0.501538 4_2:+75651158 None:intergenic
TCGGAGGAGTCTTGGAAAGA+TGG 0.504525 4_2:+75652871 None:intergenic
CTGAAAATTCAAGCGAGGGC+CGG 0.506924 4_2:-75654679 Msa0622920:CDS
TGATCAGCTATAGGACCTAA+AGG 0.507484 4_2:+75651527 None:intergenic
CCATGAGATGACATATTAGC+AGG 0.510296 4_2:+75652910 None:intergenic
TTGACATCTGATAATCATGA+AGG 0.512397 4_2:-75654122 Msa0622920:CDS
CAAATCTTCATCTGACAGCT+TGG 0.516191 4_2:+75654835 None:intergenic
GGTTCAAAGATGCCTTCAAA+AGG 0.517017 4_2:-75652292 Msa0622920:CDS
TATTTCTCTTATGGGCTTTG+GGG 0.517892 4_2:+75653646 None:intergenic
TTCAGGTGAAAGAAGCCTGC+AGG 0.518152 4_2:-75650442 Msa0622920:intron
ACTAGATTCTTCATTTGAGA+TGG 0.520142 4_2:+75652414 None:intergenic
AATCGCCGGCGCCGGCAAGT+GGG 0.521074 4_2:+75655059 None:intergenic
CCCCTGGTTCAGTCAACTAT+AGG 0.521818 4_2:-75653276 Msa0622920:CDS
TCGCCATCAATTGCTGAAAA+CGG 0.522563 4_2:-75654935 Msa0622920:CDS
GCACCATGGGTGATACCAAT+GGG 0.525467 4_2:-75654070 Msa0622920:CDS
ACAGAAATTGTTTCTAGGAG+TGG 0.525781 4_2:-75650156 Msa0622920:three_prime_UTR
GAATCGCCGGCGCCGGCAAG+TGG 0.526594 4_2:+75655058 None:intergenic
AGATCTGACCGGAGCGGGTA+CGG 0.528313 4_2:+75655392 None:intergenic
CTTGGCGTTAGTTCCCGAAA+AGG 0.530408 4_2:-75651386 Msa0622920:CDS
CCTCGCACGGAGGTCCTTGG+TGG 0.530427 4_2:+75655093 None:intergenic
AGAGCAGAGCAGAGCAGCCA+TGG 0.531954 4_2:-75655494 Msa0622920:CDS
GACTGATCCTTGTTCCGTAA+TGG 0.533682 4_2:-75652728 Msa0622920:CDS
CATCATTCAAGCAATGAGAA+AGG 0.534669 4_2:-75652613 Msa0622920:CDS
TCCATAGGTTTGACATTCTG+AGG 0.534755 4_2:+75653711 None:intergenic
GAAGAGGGTTCCTCTTGAAA+CGG 0.536043 4_2:+75655298 None:intergenic
CTGAAACACCTGGATGTTGT+CGG 0.536845 4_2:-75651448 Msa0622920:CDS
AGGTTCTAAATCGCTGCCCA+TGG 0.537008 4_2:-75652049 Msa0622920:CDS
TTCATAAACCATATTTGCAC+GGG 0.537606 4_2:-75653312 Msa0622920:CDS
GGGAATAAATTCGCCTCGCA+CGG 0.538413 4_2:+75655080 None:intergenic
TGGCCCATTGGTATCACCCA+TGG 0.538471 4_2:+75654067 None:intergenic
GGACCAGATCTGACCGGAGC+GGG 0.538597 4_2:+75655387 None:intergenic
ATCACATATTTCAGTATCAC+GGG 0.541351 4_2:+75653770 None:intergenic
CCTGCTAATATGTCATCTCA+TGG 0.541971 4_2:-75652910 Msa0622920:CDS
GAAGCTTCTTCACTTTGAGA+TGG 0.542689 4_2:+75653015 None:intergenic
AGCTTTGCTGCGGGTGAATG+TGG 0.543562 4_2:+75655417 None:intergenic
ACAGATCAACTTGATGCCCT+TGG 0.544853 4_2:-75651404 Msa0622920:CDS
TGTGATGATATTGTGCTCAA+TGG 0.546109 4_2:-75653753 Msa0622920:CDS
TGATTTCTCCCTGTTGGACA+AGG 0.546492 4_2:+75651472 None:intergenic
TGATCCGAAATTCCCGCAAA+CGG 0.547137 4_2:-75655468 Msa0622920:CDS
ACAGGAACGGGAACGGAAGA+GGG 0.547351 4_2:+75655283 None:intergenic
GCGGGTGAATGTGGATGAGG+CGG 0.548554 4_2:+75655426 None:intergenic
GATCCTATGGGTGATAGTAC+AGG 0.549573 4_2:-75651719 Msa0622920:CDS
AAGATTGATAGTTGCACCAT+GGG 0.550130 4_2:-75654083 Msa0622920:CDS
TGTGATAAGATTGTCACAAA+TGG 0.552424 4_2:-75652703 Msa0622920:CDS
AAGGAGTTCTCGAGATAGTA+GGG 0.552552 4_2:+75651590 None:intergenic
TATTCAAGTCAACTTTGTCA+TGG 0.552776 4_2:+75652959 None:intergenic
AGTTGTCACTAGAGAAGAAG+TGG 0.553740 4_2:-75651504 Msa0622920:CDS
GGCTGTGCCTTAGAGCAGCT+TGG 0.560567 4_2:-75653822 Msa0622920:CDS
ATAGGACCTAAAGGTGTGAC+TGG 0.561769 4_2:+75651536 None:intergenic
GTAGATACTGAGAAAGTGAA+TGG 0.563342 4_2:-75654020 Msa0622920:CDS
TATATATGTGTGTGTGATGG+CGG 0.563439 4_2:+75655558 None:intergenic
GGAATTTCGGATCACGTCCA+TGG 0.563873 4_2:+75655477 None:intergenic
GCATCTTTGAACCATTAACT+AGG 0.564566 4_2:+75652302 None:intergenic
GTGTTTATCTGTGCCATCTG+TGG 0.564797 4_2:-75653994 Msa0622920:CDS
TGCACCATGGGTGATACCAA+TGG 0.565398 4_2:-75654071 Msa0622920:CDS
GACAAGCTCCGACAACATCC+AGG 0.565824 4_2:+75651440 None:intergenic
TTGATCCTCGCATCATCCAC+AGG 0.565826 4_2:+75654905 None:intergenic
AAGAAGGTTATGGGAGGTCA+GGG 0.566531 4_2:-75654158 Msa0622920:CDS
AAAAGGAACAGGAACGGGAA+CGG 0.566531 4_2:+75655276 None:intergenic
ATGATGCTCAAATGAAAGGT+TGG 0.567253 4_2:+75652630 None:intergenic
TACTTCCCGATCAGAATCGC+CGG 0.567923 4_2:+75655045 None:intergenic
TCCTACTGCTAGAAAGTACC+AGG 0.568219 4_2:+75650087 None:intergenic
TTGAATGATGCTCAAATGAA+AGG 0.568241 4_2:+75652626 None:intergenic
GTTCATAAACCATATTTGCA+CGG 0.569319 4_2:-75653313 Msa0622920:CDS
ATATATGTGTGTGTGATGGC+GGG 0.569875 4_2:+75655559 None:intergenic
CGATGTGAGGAATGTGGAAG+AGG 0.571374 4_2:-75654747 Msa0622920:CDS
CATCACATATTTCAGTATCA+CGG 0.572878 4_2:+75653769 None:intergenic
CTTATCTGCACCCTCTGTTG+AGG 0.573087 4_2:-75652806 Msa0622920:CDS
GATAAGATTGTCACAAATGG+TGG 0.573529 4_2:-75652700 Msa0622920:CDS
AGATGCCAGTTCTGGCCCAT+TGG 0.574730 4_2:+75654055 None:intergenic
GGAAAATGGCAGTGTGAGGA+CGG 0.575753 4_2:-75654990 Msa0622920:CDS
ATCGCCGGCGCCGGCAAGTG+GGG 0.577299 4_2:+75655060 None:intergenic
AACAGAAATTGGTGAAACAA+AGG 0.578081 4_2:+75651571 None:intergenic
GTGAATGTGGATGAGGCGGG+TGG 0.579031 4_2:+75655430 None:intergenic
GGTACGGTGAGCTTTGCTGC+GGG 0.582951 4_2:+75655408 None:intergenic
TCTTCACTTTGAGATGGCAA+AGG 0.583276 4_2:+75653021 None:intergenic
GGGGCTTTGAACAATTTCAA+AGG 0.583740 4_2:+75654497 None:intergenic
TGTGTGTGATGGCGGGAACA+AGG 0.584043 4_2:+75655566 None:intergenic
GTTGGTAATGCTTTCGACCA+CGG 0.584626 4_2:-75653909 Msa0622920:CDS
AATACCTGGAAGTAGTTGCC+TGG 0.584643 4_2:-75650105 Msa0622920:three_prime_UTR
GGTTCTAAATCGCTGCCCAT+GGG 0.585890 4_2:-75652048 Msa0622920:CDS
TCACACACCATTACGGAACA+AGG 0.589266 4_2:+75652721 None:intergenic
AAAAGGCTAATGGATGCTAT+GGG 0.591299 4_2:-75654458 Msa0622920:CDS
TTTGTAATTGAATGAACCTG+GGG 0.594391 4_2:+75654478 None:intergenic
TGTGGAAACGATGTAACCAA+AGG 0.595525 4_2:-75655253 Msa0622920:CDS
TGAAACAGAACAACTTGCAA+AGG 0.595999 4_2:-75650411 Msa0622920:CDS
GGTTCAAGTTCCGTTTCAAG+AGG 0.600363 4_2:-75655308 Msa0622920:CDS
GCTGCGGGTGAATGTGGATG+AGG 0.602043 4_2:+75655423 None:intergenic
GGGAAGCTGATCAAAACCCC+TGG 0.602371 4_2:-75653292 Msa0622920:CDS
GAATAATCTTGACTGTGCTA+AGG 0.603599 4_2:-75653859 Msa0622920:CDS
CCACCAAGGACCTCCGTGCG+AGG 0.606940 4_2:-75655093 Msa0622920:CDS
GCAAACATAAAACGAAAAGT+GGG 0.607109 4_2:+75650016 None:intergenic
TCAGAGTTAGCCTCAACAGA+GGG 0.608322 4_2:+75652796 None:intergenic
TCATTGTCATGAAGACAAGA+AGG 0.608420 4_2:-75654174 Msa0622920:CDS
GACACTGCAACACATGGTGG+TGG 0.614063 4_2:-75652349 Msa0622920:CDS
GAGAAATCACCTGAAACACC+TGG 0.614071 4_2:-75651458 Msa0622920:CDS
AGGTCCTTGGTGGTAGCACA+AGG 0.615884 4_2:+75655103 None:intergenic
TTCTGGAAAATGGCAGTGTG+AGG 0.618228 4_2:-75654994 Msa0622920:CDS
GCCTGGTACTTTCTAGCAGT+AGG 0.620569 4_2:-75650088 Msa0622920:three_prime_UTR
CTGGTTCAGTCAACTATAGG+AGG 0.621061 4_2:-75653273 Msa0622920:CDS
GGGTACGGTGAGCTTTGCTG+CGG 0.621821 4_2:+75655407 None:intergenic
TGGTACTTTCTAGCAGTAGG+AGG 0.621839 4_2:-75650085 Msa0622920:three_prime_UTR
GGTTGCCCAAGACCTTATGA+AGG 0.622380 4_2:-75651240 Msa0622920:CDS
TAAATGCTTGAGTGAATCAA+AGG 0.622735 4_2:-75653967 Msa0622920:CDS
AGCAGACAAATGACTGTCAG+TGG 0.623587 4_2:-75652988 Msa0622920:CDS
ATGCTTGAGTGAATCAAAGG+TGG 0.624188 4_2:-75653964 Msa0622920:CDS
CCAAAAGCTTCTGAAGTTTG+GGG 0.630512 4_2:+75651813 None:intergenic
GTTTATATATGTGTGTGTGA+TGG 0.630554 4_2:+75655555 None:intergenic
TCAGCTGCTAGATGCCGAAG+AGG 0.631980 4_2:-75651261 Msa0622920:CDS
GTAGCTGAAAATTCAAGCGA+GGG 0.632081 4_2:-75654683 Msa0622920:CDS
TAGAAGCTAGCTGCGATGTG+AGG 0.635076 4_2:-75654760 Msa0622920:CDS
CTCAGAGTTAGCCTCAACAG+AGG 0.638818 4_2:+75652795 None:intergenic
CCTATAGTTGACTGAACCAG+GGG 0.639145 4_2:+75653276 None:intergenic
TTTAGACTCTGAGCTTCAGG+AGG 0.640447 4_2:+75652532 None:intergenic
TGTAGCTGAAAATTCAAGCG+AGG 0.644391 4_2:-75654684 Msa0622920:CDS
AACAATTTCAAAGGTAAACG+CGG 0.645334 4_2:+75654506 None:intergenic
TTACCAGACACTGCAACACA+TGG 0.645552 4_2:-75652355 Msa0622920:CDS
TCAAATGATTGTGATCCTAT+GGG 0.646538 4_2:-75651731 Msa0622920:CDS
TTTCCTGTACTATCACCCAT+AGG 0.646734 4_2:+75651716 None:intergenic
TCATGATTATCAGATGTCAA+AGG 0.647040 4_2:+75654125 None:intergenic
TGAACCGGACCAGATCTGAC+CGG 0.648831 4_2:+75655381 None:intergenic
TAAGATTGATAGTTGCACCA+TGG 0.648864 4_2:-75654084 Msa0622920:CDS
TACACCTGCCTTGTCCAACA+GGG 0.649992 4_2:-75651480 Msa0622920:CDS
AAATTGTATTGGCAATTCGG+AGG 0.653709 4_2:+75652855 None:intergenic
AAGCATTTATCATCCACAGA+TGG 0.656457 4_2:+75653981 None:intergenic
AAAACCCAAGAGGATGCAGA+GGG 0.661927 4_2:-75651352 Msa0622920:CDS
GTGTGTGATGGCGGGAACAA+GGG 0.664825 4_2:+75655567 None:intergenic
AGAGGCGGATTTATATGCAA+AGG 0.665530 4_2:-75653055 Msa0622920:CDS
TCCTATAGTTGACTGAACCA+GGG 0.668929 4_2:+75653275 None:intergenic
GCTAAGGCTGCTGATCACAA+TGG 0.673146 4_2:-75653843 Msa0622920:CDS
ATACACCTGTGGATGATGCG+AGG 0.679193 4_2:-75654910 Msa0622920:CDS
TTTGGAATCCAATACTACAC+CGG 0.686242 4_2:-75652224 Msa0622920:intron
ATTCCCCTATCAAAATTCAG+AGG 0.686862 4_2:+75654860 None:intergenic
ATAAGATTGTCACAAATGGT+GGG 0.687693 4_2:-75652699 Msa0622920:CDS
AATAAATTCGCCTCGCACGG+AGG 0.688523 4_2:+75655083 None:intergenic
GTTGCAGTGTCTGGTAACGC+AGG 0.694475 4_2:+75652361 None:intergenic
GTTGTCACTAGAGAAGAAGT+GGG 0.694605 4_2:-75651503 Msa0622920:CDS
TCTACCTTGTGCTACCACCA+AGG 0.697929 4_2:-75655107 Msa0622920:CDS
GAAGACAAGAAGGTTATGGG+AGG 0.705451 4_2:-75654164 Msa0622920:CDS
ACATAGATGACATCATTAGG+TGG 0.709990 4_2:+75654788 None:intergenic
CCAGACACTGCAACACATGG+TGG 0.710994 4_2:-75652352 Msa0622920:CDS
TGAAAACGGCGATACACCTG+TGG 0.720243 4_2:-75654921 Msa0622920:CDS
CGGACCAGATCTGACCGGAG+CGG 0.748187 4_2:+75655386 None:intergenic
TAGCTGCGATGTGAGGAATG+TGG 0.763594 4_2:-75654753 Msa0622920:CDS
AATCTTGCTTAACATCACCG+TGG 0.800564 4_2:+75653892 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATAATATTA+TGG - chr4_2:75652418-75652437 Msa0622920:CDS 0.0%
!!! TTATTTTTCATTTTTTTGAT+TGG - chr4_2:75653664-75653683 Msa0622920:CDS 10.0%
!!! ATAAGTTTAGTTTTAAAAAA+CGG + chr4_2:75653692-75653711 None:intergenic 10.0%
!!! TTTTTTATTTGAATATTTTC+AGG - chr4_2:75655099-75655118 Msa0622920:CDS 10.0%
!! AAATAAACAAATTGTTTATT+TGG + chr4_2:75655257-75655276 None:intergenic 10.0%
!! TAAAAAAACAAATTTCTATA+AGG + chr4_2:75655520-75655539 None:intergenic 10.0%
!! TGATGAAAATAAAAATTGAA+AGG + chr4_2:75650941-75650960 None:intergenic 15.0%
!! ATTCAATCAATAAATAACAA+AGG + chr4_2:75651279-75651298 None:intergenic 15.0%
!! ATTTAAATAACCAAACTTAT+CGG + chr4_2:75654601-75654620 None:intergenic 15.0%
!!! TGATATAAATTTATTTTCTC+AGG - chr4_2:75654746-75654765 Msa0622920:CDS 15.0%
!! ATAGTGAAAAATAAATACTA+GGG + chr4_2:75655601-75655620 None:intergenic 15.0%
!! AATAGTGAAAAATAAATACT+AGG + chr4_2:75655602-75655621 None:intergenic 15.0%
!!! ATGAAATTTTGTTAGTTGAT+TGG - chr4_2:75651007-75651026 Msa0622920:intron 20.0%
!! TGCAAACAACTAAATAATAA+AGG + chr4_2:75651159-75651178 None:intergenic 20.0%
!! AATTATATATCATGTAACCT+GGG - chr4_2:75652210-75652229 Msa0622920:intron 20.0%
!! TTAATATTGTATTGCATAAG+TGG + chr4_2:75652370-75652389 None:intergenic 20.0%
!!! TTAAGCAAATTTTGTTCTTT+GGG + chr4_2:75652891-75652910 None:intergenic 20.0%
!!! ATTAAGCAAATTTTGTTCTT+TGG + chr4_2:75652892-75652911 None:intergenic 20.0%
!! GATATATACACAAAAGATTA+TGG + chr4_2:75653366-75653385 None:intergenic 20.0%
!!! TTAAGTTTTTAAAACATGCT+GGG - chr4_2:75653533-75653552 Msa0622920:intron 20.0%
!!! AGTATTGGTTTTTATTCTAT+TGG - chr4_2:75653617-75653636 Msa0622920:intron 20.0%
!!! ACTAAACTTATACTACTTTT+AGG - chr4_2:75653701-75653720 Msa0622920:CDS 20.0%
!!! TTTTTCTCAAAATTCCTTTT+CGG + chr4_2:75654189-75654208 None:intergenic 20.0%
!! ATAAAATGATCAGAAAAGAA+AGG + chr4_2:75654472-75654491 None:intergenic 20.0%
!! TGAAATGAAATAATAGTGAA+AGG + chr4_2:75654642-75654661 None:intergenic 20.0%
!! GCAAAATATTATAAACTTGT+CGG + chr4_2:75654800-75654819 None:intergenic 20.0%
!! TAATGTAGCATAAAAATAAG+AGG - chr4_2:75655052-75655071 Msa0622920:CDS 20.0%
!! TAAACAAATTGTTTATTTGG+AGG + chr4_2:75655254-75655273 None:intergenic 20.0%
!!! TAACCATTTTTTAATCTGTT+TGG + chr4_2:75655354-75655373 None:intergenic 20.0%
!! TTTTGTAATTGAATGAACCT+GGG + chr4_2:75651084-75651103 None:intergenic 25.0%
! ATTCAATTACAAAAGGCTAA+TGG - chr4_2:75651090-75651109 Msa0622920:intron 25.0%
!! AATTGGCATCGTAATTTTAT+AGG - chr4_2:75651346-75651365 Msa0622920:CDS 25.0%
!! TTTTATAGGAATACCGAAAT+TGG - chr4_2:75651360-75651379 Msa0622920:CDS 25.0%
! TTTATAGGAATACCGAAATT+GGG - chr4_2:75651361-75651380 Msa0622920:CDS 25.0%
! TTGACATTGTATTAGGTATT+AGG + chr4_2:75652050-75652069 None:intergenic 25.0%
! TACCTAATACAATGTCAATT+TGG - chr4_2:75652052-75652071 Msa0622920:intron 25.0%
! AACCAAATTGACATTGTATT+AGG + chr4_2:75652057-75652076 None:intergenic 25.0%
! TGACAATATATGCATATACA+TGG - chr4_2:75652171-75652190 Msa0622920:intron 25.0%
!!! ATACATGGTTTTGTATTTGT+TGG - chr4_2:75652186-75652205 Msa0622920:intron 25.0%
! CAATTATATATCATGTAACC+TGG - chr4_2:75652209-75652228 Msa0622920:intron 25.0%
! TTGGGAAGATTCTTAAAATA+TGG + chr4_2:75652317-75652336 None:intergenic 25.0%
! AAAGAAAAAAGTCTTCTGAA+TGG - chr4_2:75653233-75653252 Msa0622920:CDS 25.0%
! AAAAGGAAGCAATAACAAAA+AGG - chr4_2:75653283-75653302 Msa0622920:CDS 25.0%
! TATAATCAATGAGAAAGAGA+GGG + chr4_2:75653420-75653439 None:intergenic 25.0%
! TTATAATCAATGAGAAAGAG+AGG + chr4_2:75653421-75653440 None:intergenic 25.0%
!! TTGATCAAGTAATTTTGAAC+AGG - chr4_2:75653489-75653508 Msa0622920:intron 25.0%
!!! GTTTTAAAAACTTAACCCAT+GGG + chr4_2:75653528-75653547 None:intergenic 25.0%
!!! TGTTTTAAAAACTTAACCCA+TGG + chr4_2:75653529-75653548 None:intergenic 25.0%
!!! GTTAAGTTTTTAAAACATGC+TGG - chr4_2:75653532-75653551 Msa0622920:intron 25.0%
!! TTCTCATTTTCCAACAAAAT+CGG + chr4_2:75653583-75653602 None:intergenic 25.0%
! GAATAAAAACCAATACTTAC+AGG + chr4_2:75653614-75653633 None:intergenic 25.0%
! AAATCTCTATGAACAGAAAT+TGG + chr4_2:75654001-75654020 None:intergenic 25.0%
!! TTTTCTCAAAATTCCTTTTC+GGG + chr4_2:75654188-75654207 None:intergenic 25.0%
!!! CTTGAGGTTTTATTTCTAAA+TGG + chr4_2:75654829-75654848 None:intergenic 25.0%
! ATAAAACCTCAAGTAAATTC+TGG - chr4_2:75654836-75654855 Msa0622920:CDS 25.0%
! AAAAAAATGGCAAAGTTACT+TGG + chr4_2:75654893-75654912 None:intergenic 25.0%
! CTGAATTTATTAAGTTACAC+GGG + chr4_2:75654999-75655018 None:intergenic 25.0%
! GCTGAATTTATTAAGTTACA+CGG + chr4_2:75655000-75655019 None:intergenic 25.0%
!! TATTTGGAGGAACAAATTTT+GGG + chr4_2:75655241-75655260 None:intergenic 25.0%
!! TTATTTGGAGGAACAAATTT+TGG + chr4_2:75655242-75655261 None:intergenic 25.0%
! CAACCAAACAGATTAAAAAA+TGG - chr4_2:75655348-75655367 Msa0622920:CDS 25.0%
!! TGCTGTATATACTCTTTTTA+CGG - chr4_2:75655562-75655581 Msa0622920:CDS 25.0%
GTTTATATATGTGTGTGTGA+TGG + chr4_2:75650006-75650025 None:intergenic 30.0%
TCAGCTGAAATTTCTGAATT+AGG - chr4_2:75650593-75650612 Msa0622920:intron 30.0%
CAGCTGAAATTTCTGAATTA+GGG - chr4_2:75650594-75650613 Msa0622920:intron 30.0%
GAAATTTCTGAATTAGGGTT+TGG - chr4_2:75650599-75650618 Msa0622920:intron 30.0%
!!! TTTGAACAGAGCTATTTTTC+CGG + chr4_2:75650901-75650920 None:intergenic 30.0%
TTCAAAGGAGTAAATCTGTA+AGG - chr4_2:75650915-75650934 Msa0622920:intron 30.0%
TTTCATCATTGCATATGTGT+TGG - chr4_2:75650953-75650972 Msa0622920:intron 30.0%
AACAATTTCAAAGGTAAACG+CGG + chr4_2:75651055-75651074 None:intergenic 30.0%
TTTGTAATTGAATGAACCTG+GGG + chr4_2:75651083-75651102 None:intergenic 30.0%
! CTTTTGTAATTGAATGAACC+TGG + chr4_2:75651085-75651104 None:intergenic 30.0%
CAGGTTCATTCAATTACAAA+AGG - chr4_2:75651083-75651102 Msa0622920:intron 30.0%
!!! ATTTAGTTTTACATGTGCGA+CGG - chr4_2:75651193-75651212 Msa0622920:CDS 30.0%
! GATACTATTGTACGTGATTT+TGG - chr4_2:75651232-75651251 Msa0622920:CDS 30.0%
TCATGATTATCAGATGTCAA+AGG + chr4_2:75651436-75651455 None:intergenic 30.0%
TTGACATCTGATAATCATGA+AGG - chr4_2:75651436-75651455 Msa0622920:CDS 30.0%
CAACTATCAATCTTAGTTTC+AGG + chr4_2:75651469-75651488 None:intergenic 30.0%
TAAATGCTTGAGTGAATCAA+AGG - chr4_2:75651591-75651610 Msa0622920:CDS 30.0%
TTAAGCAAGATTCTTTCAAC+AGG - chr4_2:75651677-75651696 Msa0622920:CDS 30.0%
ATCACATATTTCAGTATCAC+GGG + chr4_2:75651791-75651810 None:intergenic 30.0%
CATCACATATTTCAGTATCA+CGG + chr4_2:75651792-75651811 None:intergenic 30.0%
! TTATTTCTCTTATGGGCTTT+GGG + chr4_2:75651916-75651935 None:intergenic 30.0%
! ATTATTTCTCTTATGGGCTT+TGG + chr4_2:75651917-75651936 None:intergenic 30.0%
!! GAGTGGATTATTTCTCTTAT+GGG + chr4_2:75651923-75651942 None:intergenic 30.0%
!! TGAGTGGATTATTTCTCTTA+TGG + chr4_2:75651924-75651943 None:intergenic 30.0%
!! TATTTGTTTTCTGCCAGTTA+TGG - chr4_2:75651979-75651998 Msa0622920:CDS 30.0%
!! ATTTGTTTTCTGCCAGTTAT+GGG - chr4_2:75651980-75651999 Msa0622920:CDS 30.0%
TGTTTAAACTTCCACTATAG+TGG - chr4_2:75652113-75652132 Msa0622920:intron 30.0%
GTTCATAAACCATATTTGCA+CGG - chr4_2:75652245-75652264 Msa0622920:CDS 30.0%
TTCATAAACCATATTTGCAC+GGG - chr4_2:75652246-75652265 Msa0622920:CDS 30.0%
TATTCAAGTCAACTTTGTCA+TGG + chr4_2:75652602-75652621 None:intergenic 30.0%
!! CAAAGTTGACTTGAATACTT+TGG - chr4_2:75652605-75652624 Msa0622920:CDS 30.0%
! GTCAAATTGTATTGGCAATT+CGG + chr4_2:75652709-75652728 None:intergenic 30.0%
! TCTTTTGCGTCAAATTGTAT+TGG + chr4_2:75652717-75652736 None:intergenic 30.0%
ACAATTTGACGCAAAAGAAA+TGG - chr4_2:75652719-75652738 Msa0622920:CDS 30.0%
AATCTTATCACACACCATTA+CGG + chr4_2:75652847-75652866 None:intergenic 30.0%
TGTGATAAGATTGTCACAAA+TGG - chr4_2:75652855-75652874 Msa0622920:CDS 30.0%
ATAAGATTGTCACAAATGGT+GGG - chr4_2:75652859-75652878 Msa0622920:CDS 30.0%
TTGAATGATGCTCAAATGAA+AGG + chr4_2:75652935-75652954 None:intergenic 30.0%
TCTTCAGCATCTAACATATT+AGG + chr4_2:75653062-75653081 None:intergenic 30.0%
ACTAGATTCTTCATTTGAGA+TGG + chr4_2:75653147-75653166 None:intergenic 30.0%
!! TTGTTATTGCTTCCTTTTGA+AGG + chr4_2:75653281-75653300 None:intergenic 30.0%
!! TTAAAAGTATGCAGGTCTTT+TGG + chr4_2:75653390-75653409 None:intergenic 30.0%
! GGTAAATCTTAAAAGTATGC+AGG + chr4_2:75653398-75653417 None:intergenic 30.0%
ATAATCAATGAGAAAGAGAG+GGG + chr4_2:75653419-75653438 None:intergenic 30.0%
AGTCTAATTCCTGTAAGTAT+TGG - chr4_2:75653602-75653621 Msa0622920:intron 30.0%
! TGCAAGTTTGAATCTGAAAT+TGG + chr4_2:75653788-75653807 None:intergenic 30.0%
TTCAAATGATTGTGATCCTA+TGG - chr4_2:75653826-75653845 Msa0622920:CDS 30.0%
TCAAATGATTGTGATCCTAT+GGG - chr4_2:75653827-75653846 Msa0622920:CDS 30.0%
TATCTTGTAGTTGAGATCTT+GGG + chr4_2:75653928-75653947 None:intergenic 30.0%
TTATCTTGTAGTTGAGATCT+TGG + chr4_2:75653929-75653948 None:intergenic 30.0%
AACAGAAATTGGTGAAACAA+AGG + chr4_2:75653990-75654009 None:intergenic 30.0%
TTGATCTGTGACTTTCATTT+CGG + chr4_2:75654143-75654162 None:intergenic 30.0%
!! ATTTTGAGAAAAAACCCAAG+AGG - chr4_2:75654196-75654215 Msa0622920:intron 30.0%
!! TAACAACATGTTTCTGAGAT+GGG + chr4_2:75654350-75654369 None:intergenic 30.0%
ATAGTCATATCAACATCATG+TGG + chr4_2:75654431-75654450 None:intergenic 30.0%
CTTCACGATAATAACTGAAA+TGG - chr4_2:75654496-75654515 Msa0622920:CDS 30.0%
TTATTATGCAAAGCTTGTGA+TGG - chr4_2:75654551-75654570 Msa0622920:intron 30.0%
ATTATCTCATCCGATAAGTT+TGG - chr4_2:75654588-75654607 Msa0622920:intron 30.0%
TAATAGTGAAAGGAATTGCA+AGG + chr4_2:75654632-75654651 None:intergenic 30.0%
GGTCAAATGCACTAAAAAAA+TGG + chr4_2:75654906-75654925 None:intergenic 30.0%
! GCATATAAAGACGTTGATAA+TGG + chr4_2:75655022-75655041 None:intergenic 30.0%
TGTTAAGATCATCATTCATC+TGG + chr4_2:75655183-75655202 None:intergenic 30.0%
!! AGGAACAAATTTTGGGAATA+AGG + chr4_2:75655234-75655253 None:intergenic 30.0%
TTCGGATGATAGATAATGTA+AGG + chr4_2:75655383-75655402 None:intergenic 30.0%
TCCTAGAAACAATTTCTGTT+CGG + chr4_2:75655401-75655420 None:intergenic 30.0%
!!! GTGTTTTAAAACCAAATACC+TGG - chr4_2:75655439-75655458 Msa0622920:CDS 30.0%
GCAAACATAAAACGAAAAGT+GGG + chr4_2:75655545-75655564 None:intergenic 30.0%
AGCAAACATAAAACGAAAAG+TGG + chr4_2:75655546-75655565 None:intergenic 30.0%
TATATATGTGTGTGTGATGG+CGG + chr4_2:75650003-75650022 None:intergenic 35.0%
GTCTCGAAATGTGTGAAAAT+TGG + chr4_2:75650035-75650054 None:intergenic 35.0%
!! ATGGTTGATTCTTTTTGCTG+CGG + chr4_2:75650220-75650239 None:intergenic 35.0%
GTTACATCGTTTCCACAAAA+AGG + chr4_2:75650302-75650321 None:intergenic 35.0%
AACCAAAGGACTTTCAGATT+CGG - chr4_2:75650319-75650338 Msa0622920:intron 35.0%
CTTAACAAGATCGTCATCTT+CGG + chr4_2:75650396-75650415 None:intergenic 35.0%
! TCACGTTTTGCTTTCTTGAA+AGG + chr4_2:75650422-75650441 None:intergenic 35.0%
ATTCCCCTATCAAAATTCAG+AGG + chr4_2:75650701-75650720 None:intergenic 35.0%
AAGCTGTCAGATGAAGATTT+GGG - chr4_2:75650725-75650744 Msa0622920:intron 35.0%
ACATAGATGACATCATTAGG+TGG + chr4_2:75650773-75650792 None:intergenic 35.0%
CCTACATAGATGACATCATT+AGG + chr4_2:75650776-75650795 None:intergenic 35.0%
CCTAATGATGTCATCTATGT+AGG - chr4_2:75650773-75650792 Msa0622920:intron 35.0%
! GGAAAAATAGCTCTGTTCAA+AGG - chr4_2:75650900-75650919 Msa0622920:intron 35.0%
! AAAAGGCTAATGGATGCTAT+GGG - chr4_2:75651100-75651119 Msa0622920:intron 35.0%
GATGCTATGGGAGATAATTT+CGG - chr4_2:75651112-75651131 Msa0622920:intron 35.0%
! TTGGTAGTTGTTCTATGTAG+AGG - chr4_2:75651251-75651270 Msa0622920:CDS 35.0%
! AATTAGCTTGATATGTGCGA+TGG - chr4_2:75651319-75651338 Msa0622920:CDS 35.0%
ATATGTGCGATGGAACTAAT+TGG - chr4_2:75651329-75651348 Msa0622920:CDS 35.0%
TCATGACAATGACCCAATTT+CGG + chr4_2:75651376-75651395 None:intergenic 35.0%
TCATTGTCATGAAGACAAGA+AGG - chr4_2:75651384-75651403 Msa0622920:CDS 35.0%
TCATGAAGACAAGAAGGTTA+TGG - chr4_2:75651390-75651409 Msa0622920:CDS 35.0%
CATGAAGACAAGAAGGTTAT+GGG - chr4_2:75651391-75651410 Msa0622920:CDS 35.0%
! TAAGATTGATAGTTGCACCA+TGG - chr4_2:75651474-75651493 Msa0622920:CDS 35.0%
! AAGATTGATAGTTGCACCAT+GGG - chr4_2:75651475-75651494 Msa0622920:CDS 35.0%
TTCTCAGTATCTACTTGCAT+TGG + chr4_2:75651532-75651551 None:intergenic 35.0%
GTAGATACTGAGAAAGTGAA+TGG - chr4_2:75651538-75651557 Msa0622920:CDS 35.0%
AAGCATTTATCATCCACAGA+TGG + chr4_2:75651580-75651599 None:intergenic 35.0%
GAATAATCTTGACTGTGCTA+AGG - chr4_2:75651699-75651718 Msa0622920:CDS 35.0%
TGTGATGATATTGTGCTCAA+TGG - chr4_2:75651805-75651824 Msa0622920:CDS 35.0%
TATTTCTCTTATGGGCTTTG+GGG + chr4_2:75651915-75651934 None:intergenic 35.0%
CAAAATGTCTAACCCATAAC+TGG + chr4_2:75651995-75652014 None:intergenic 35.0%
AATCTTCCCAAAGATGACTA+TGG - chr4_2:75652326-75652345 Msa0622920:CDS 35.0%
TGGTTACCATAGTCATCTTT+GGG + chr4_2:75652335-75652354 None:intergenic 35.0%
!!! AAAGTGCTTGCTGATTTTAC+AGG - chr4_2:75652447-75652466 Msa0622920:CDS 35.0%
! TCTTGGAAAGATGGCAATTT+TGG + chr4_2:75652681-75652700 None:intergenic 35.0%
! AAATTGTATTGGCAATTCGG+AGG + chr4_2:75652706-75652725 None:intergenic 35.0%
GATAAGATTGTCACAAATGG+TGG - chr4_2:75652858-75652877 Msa0622920:CDS 35.0%
! AGCAAATTTTGTTCTTTGGG+TGG + chr4_2:75652888-75652907 None:intergenic 35.0%
ATGATGCTCAAATGAAAGGT+TGG + chr4_2:75652931-75652950 None:intergenic 35.0%
CATCATTCAAGCAATGAGAA+AGG - chr4_2:75652945-75652964 Msa0622920:CDS 35.0%
AGCTCAGAGTCTAAATCAAT+TGG - chr4_2:75653034-75653053 Msa0622920:CDS 35.0%
!!! CGTCATTTTTGCAAATTGCA+TGG + chr4_2:75653100-75653119 None:intergenic 35.0%
TTGCAAAAATGACGATGTTG+TGG - chr4_2:75653106-75653125 Msa0622920:intron 35.0%
GCATCTTTGAACCATTAACT+AGG + chr4_2:75653259-75653278 None:intergenic 35.0%
!!! AACAAAAAGGCTAGTTTTGC+TGG - chr4_2:75653296-75653315 Msa0622920:CDS 35.0%
TTTGCTGGTGAGATGAAAAA+TGG - chr4_2:75653311-75653330 Msa0622920:CDS 35.0%
TGGTGAGATGAAAAATGGTT+TGG - chr4_2:75653316-75653335 Msa0622920:CDS 35.0%
! TTTGGAATCCAATACTACAC+CGG - chr4_2:75653334-75653353 Msa0622920:intron 35.0%
CAAAAGATTATGGTTCTCAC+CGG + chr4_2:75653356-75653375 None:intergenic 35.0%
! AAGATTGCTTCCGATTTTGT+TGG - chr4_2:75653570-75653589 Msa0622920:intron 35.0%
!! TCCAAAAGCTTCTGAAGTTT+GGG + chr4_2:75653749-75653768 None:intergenic 35.0%
!! ATCCAAAAGCTTCTGAAGTT+TGG + chr4_2:75653750-75653769 None:intergenic 35.0%
! GAATCTGAAATTGGCAGAAA+TGG + chr4_2:75653779-75653798 None:intergenic 35.0%
CAATCATTTGAATCACTTCC+AGG + chr4_2:75653818-75653837 None:intergenic 35.0%
TACTTCCTTCATAAGGTCTT+GGG + chr4_2:75654326-75654345 None:intergenic 35.0%
ATACTTCCTTCATAAGGTCT+TGG + chr4_2:75654327-75654346 None:intergenic 35.0%
! CTAACAACATGTTTCTGAGA+TGG + chr4_2:75654351-75654370 None:intergenic 35.0%
ACTTGGAATTTCTCACCATA+GGG + chr4_2:75654876-75654895 None:intergenic 35.0%
TACTTGGAATTTCTCACCAT+AGG + chr4_2:75654877-75654896 None:intergenic 35.0%
TGAAACAGAACAACTTGCAA+AGG - chr4_2:75655147-75655166 Msa0622920:CDS 35.0%
CGATCTGAAAACTTAACACT+TGG + chr4_2:75655309-75655328 None:intergenic 35.0%
! TAAGTTTTCAGATCGTGTTG+AGG - chr4_2:75655314-75655333 Msa0622920:CDS 35.0%
! TCCGAACAGAAATTGTTTCT+AGG - chr4_2:75655397-75655416 Msa0622920:CDS 35.0%
!! ACAGAAATTGTTTCTAGGAG+TGG - chr4_2:75655402-75655421 Msa0622920:CDS 35.0%
! TTGTTGGCGGGAAAATTTTG+TGG + chr4_2:75649968-75649987 None:intergenic 40.0%
ATATATGTGTGTGTGATGGC+GGG + chr4_2:75650002-75650021 None:intergenic 40.0%
ACTTGAAACGGAACTTGAAC+CGG + chr4_2:75650195-75650214 None:intergenic 40.0%
!! TGGTTGATTCTTTTTGCTGC+GGG + chr4_2:75650219-75650238 None:intergenic 40.0%
GAATCAACCATACTCAGTTC+CGG - chr4_2:75650229-75650248 Msa0622920:CDS 40.0%
TCTTGAAACGGAACTTGAAC+CGG + chr4_2:75650251-75650270 None:intergenic 40.0%
TCCACAAAAAGGAACAGGAA+CGG + chr4_2:75650291-75650310 None:intergenic 40.0%
TCGTTTCCACAAAAAGGAAC+AGG + chr4_2:75650296-75650315 None:intergenic 40.0%
TGTGGAAACGATGTAACCAA+AGG - chr4_2:75650305-75650324 Msa0622920:intron 40.0%
TTCCGAATCTGAAAGTCCTT+TGG + chr4_2:75650324-75650343 None:intergenic 40.0%
CGAAGATGACGATCTTGTTA+AGG - chr4_2:75650394-75650413 Msa0622920:CDS 40.0%
ATCGGGAAGTAGCTGAATTA+GGG - chr4_2:75650525-75650544 Msa0622920:intron 40.0%
!! ATTAGGGTTTTATGCTCCGT+CGG - chr4_2:75650541-75650560 Msa0622920:intron 40.0%
TCGCCATCAATTGCTGAAAA+CGG - chr4_2:75650623-75650642 Msa0622920:intron 40.0%
!! ACGAGCCTCTGAATTTTGAT+AGG - chr4_2:75650693-75650712 Msa0622920:intron 40.0%
!! CGAGCCTCTGAATTTTGATA+GGG - chr4_2:75650694-75650713 Msa0622920:intron 40.0%
!! GAGCCTCTGAATTTTGATAG+GGG - chr4_2:75650695-75650714 Msa0622920:intron 40.0%
CAAATCTTCATCTGACAGCT+TGG + chr4_2:75650726-75650745 None:intergenic 40.0%
CAAGCTGTCAGATGAAGATT+TGG - chr4_2:75650724-75650743 Msa0622920:intron 40.0%
! TTTTCAGCTACATTAGCAGC+AGG + chr4_2:75650866-75650885 None:intergenic 40.0%
TGTAGCTGAAAATTCAAGCG+AGG - chr4_2:75650874-75650893 Msa0622920:intron 40.0%
GTAGCTGAAAATTCAAGCGA+GGG - chr4_2:75650875-75650894 Msa0622920:intron 40.0%
GTTGATTGGATTCTTGATGC+AGG - chr4_2:75651021-75651040 Msa0622920:intron 40.0%
!! GGGGCTTTGAACAATTTCAA+AGG + chr4_2:75651064-75651083 None:intergenic 40.0%
TTGAAATTGTTCAAAGCCCC+AGG - chr4_2:75651064-75651083 Msa0622920:intron 40.0%
! CAAAAGGCTAATGGATGCTA+TGG - chr4_2:75651099-75651118 Msa0622920:intron 40.0%
ATGCTTGAGTGAATCAAAGG+TGG - chr4_2:75651594-75651613 Msa0622920:CDS 40.0%
AATCTTGCTTAACATCACCG+TGG + chr4_2:75651669-75651688 None:intergenic 40.0%
ATTTCAGTATCACGGGTCAT+TGG + chr4_2:75651784-75651803 None:intergenic 40.0%
ACCTCAGAATGTCAAACCTA+TGG - chr4_2:75651846-75651865 Msa0622920:intron 40.0%
TCCATAGGTTTGACATTCTG+AGG + chr4_2:75651850-75651869 None:intergenic 40.0%
AGTGCTTTCTTGAGTGTTTC+TGG + chr4_2:75651878-75651897 None:intergenic 40.0%
CTTACATGTTTGCTCTTGAG+TGG + chr4_2:75651940-75651959 None:intergenic 40.0%
AATTTGGTTAAACCCTCAGC+TGG - chr4_2:75652068-75652087 Msa0622920:intron 40.0%
ATTTGGTTAAACCCTCAGCT+GGG - chr4_2:75652069-75652088 Msa0622920:intron 40.0%
CCTAAAAAAAACCCAGCTGA+GGG + chr4_2:75652083-75652102 None:intergenic 40.0%
!!! CCTCAGCTGGGTTTTTTTTA+GGG - chr4_2:75652081-75652100 Msa0622920:intron 40.0%
TAAACTTCCACTATAGTGGC+TGG - chr4_2:75652117-75652136 Msa0622920:intron 40.0%
TCCTATAGTTGACTGAACCA+GGG + chr4_2:75652286-75652305 None:intergenic 40.0%
GTGGTTACCATAGTCATCTT+TGG + chr4_2:75652336-75652355 None:intergenic 40.0%
ATAAGTGGTTGAAAACGTGG+TGG + chr4_2:75652355-75652374 None:intergenic 40.0%
TGCATAAGTGGTTGAAAACG+TGG + chr4_2:75652358-75652377 None:intergenic 40.0%
!! GCTGATTTTACAGGTACATC+TGG - chr4_2:75652456-75652475 Msa0622920:CDS 40.0%
!! CGCCTCTTCATTTTTGTGAT+GGG + chr4_2:75652490-75652509 None:intergenic 40.0%
CCATCACAAAAATGAAGAGG+CGG - chr4_2:75652488-75652507 Msa0622920:CDS 40.0%
! AGAGGCGGATTTATATGCAA+AGG - chr4_2:75652503-75652522 Msa0622920:CDS 40.0%
! TTTGAGATGGCAAAGGAAGT+TGG + chr4_2:75652533-75652552 None:intergenic 40.0%
!! TCTTCACTTTGAGATGGCAA+AGG + chr4_2:75652540-75652559 None:intergenic 40.0%
! GAAGCTTCTTCACTTTGAGA+TGG + chr4_2:75652546-75652565 None:intergenic 40.0%
CCATGAGATGACATATTAGC+AGG + chr4_2:75652651-75652670 None:intergenic 40.0%
CCTGCTAATATGTCATCTCA+TGG - chr4_2:75652648-75652667 Msa0622920:CDS 40.0%
AAGAAAGCAGTTTGTGAGTC+TGG - chr4_2:75652977-75652996 Msa0622920:CDS 40.0%
TGATTTAGACTCTGAGCTTC+AGG + chr4_2:75653032-75653051 None:intergenic 40.0%
CTTCTGAATGGCCTAGTTAA+TGG - chr4_2:75653245-75653264 Msa0622920:CDS 40.0%
GGTTCAAAGATGCCTTCAAA+AGG - chr4_2:75653266-75653285 Msa0622920:CDS 40.0%
!! CCAAAAGCTTCTGAAGTTTG+GGG + chr4_2:75653748-75653767 None:intergenic 40.0%
TCAAACTTGCAAGTAACTCC+TGG - chr4_2:75653797-75653816 Msa0622920:CDS 40.0%
TTTCCTGTACTATCACCCAT+AGG + chr4_2:75653845-75653864 None:intergenic 40.0%
GGTGATAGTACAGGAAATTC+TGG - chr4_2:75653848-75653867 Msa0622920:CDS 40.0%
AAGGAGTTCTCGAGATAGTA+GGG + chr4_2:75653971-75653990 None:intergenic 40.0%
AAAGGAGTTCTCGAGATAGT+AGG + chr4_2:75653972-75653991 None:intergenic 40.0%
GATTTACCAGTCACACCTTT+AGG - chr4_2:75654016-75654035 Msa0622920:CDS 40.0%
TGATCAGCTATAGGACCTAA+AGG + chr4_2:75654034-75654053 None:intergenic 40.0%
GTGACAACTTGATCAGCTAT+AGG + chr4_2:75654043-75654062 None:intergenic 40.0%
AGTTGTCACTAGAGAAGAAG+TGG - chr4_2:75654054-75654073 Msa0622920:CDS 40.0%
GTTGTCACTAGAGAAGAAGT+GGG - chr4_2:75654055-75654074 Msa0622920:CDS 40.0%
CAAATGCTCTTTCTGCATGA+AGG + chr4_2:75654264-75654283 None:intergenic 40.0%
GATGGGATACTTCCTTCATA+AGG + chr4_2:75654333-75654352 None:intergenic 40.0%
ATAGGGCCAGAATTTACTTG+AGG + chr4_2:75654845-75654864 None:intergenic 40.0%
TTGGAATTTCTCACCATAGG+GGG + chr4_2:75654874-75654893 None:intergenic 40.0%
CTTGGAATTTCTCACCATAG+GGG + chr4_2:75654875-75654894 None:intergenic 40.0%
GGAATAAGGTATGCACATAC+AGG + chr4_2:75655220-75655239 None:intergenic 40.0%
TTCAGATCGTGTTGAGGAAA+AGG - chr4_2:75655320-75655339 Msa0622920:CDS 40.0%
GCAGTAGGAGGAAAAATAGA+TGG - chr4_2:75655485-75655504 Msa0622920:CDS 40.0%
! GAACAAGGGTTTTTGTTGGC+GGG + chr4_2:75649980-75649999 None:intergenic 45.0%
! GGAACAAGGGTTTTTGTTGG+CGG + chr4_2:75649981-75650000 None:intergenic 45.0%
TGATCCGAAATTCCCGCAAA+CGG - chr4_2:75650090-75650109 Msa0622920:three_prime_UTR 45.0%
TTTGCTGCGGGAACTTGAAA+CGG + chr4_2:75650207-75650226 None:intergenic 45.0%
ACTTGAACCGGAACTGAGTA+TGG + chr4_2:75650239-75650258 None:intergenic 45.0%
! GGTTCAAGTTCCGTTTCAAG+AGG - chr4_2:75650194-75650213 Msa0622920:exon 45.0%
GAAGAGGGTTCCTCTTGAAA+CGG + chr4_2:75650263-75650282 None:intergenic 45.0%
AAAAGGAACAGGAACGGGAA+CGG + chr4_2:75650285-75650304 None:intergenic 45.0%
CCACAAAAAGGAACAGGAAC+GGG + chr4_2:75650290-75650309 None:intergenic 45.0%
CGAATTTATTCCCCACTTGC+CGG - chr4_2:75650488-75650507 Msa0622920:intron 45.0%
GATCGGGAAGTAGCTGAATT+AGG - chr4_2:75650524-75650543 Msa0622920:intron 45.0%
! TTCTGGAAAATGGCAGTGTG+AGG - chr4_2:75650564-75650583 Msa0622920:intron 45.0%
!! TCGCCGTTTTCAGCAATTGA+TGG + chr4_2:75650629-75650648 None:intergenic 45.0%
GAAGACAAGAAGGTTATGGG+AGG - chr4_2:75651394-75651413 Msa0622920:CDS 45.0%
AAGAAGGTTATGGGAGGTCA+GGG - chr4_2:75651400-75651419 Msa0622920:CDS 45.0%
ATTGGTGAAGATGCCAGTTC+TGG + chr4_2:75651514-75651533 None:intergenic 45.0%
GTGTTTATCTGTGCCATCTG+TGG - chr4_2:75651564-75651583 Msa0622920:CDS 45.0%
GAGTGAATCAAAGGTGGATC+TGG - chr4_2:75651600-75651619 Msa0622920:CDS 45.0%
! GATCTGGCTGCAGATTTTCT+GGG - chr4_2:75651616-75651635 Msa0622920:CDS 45.0%
TTTCTGGGTGCTAGAGATGT+TGG - chr4_2:75651631-75651650 Msa0622920:CDS 45.0%
!! GTTGGTAATGCTTTCGACCA+CGG - chr4_2:75651649-75651668 Msa0622920:CDS 45.0%
CAAAACACCAAGCTGCTCTA+AGG + chr4_2:75651746-75651765 None:intergenic 45.0%
! TCTGAGGTATGCTCTGCATT+TGG + chr4_2:75651834-75651853 None:intergenic 45.0%
!! GTGTTTCTGGTCAGATCCAT+AGG + chr4_2:75651865-75651884 None:intergenic 45.0%
!!! CCCTCAGCTGGGTTTTTTTT+AGG - chr4_2:75652080-75652099 Msa0622920:intron 45.0%
CCCTAAAAAAAACCCAGCTG+AGG + chr4_2:75652084-75652103 None:intergenic 45.0%
AAGTTCACCAGCCACTATAG+TGG + chr4_2:75652127-75652146 None:intergenic 45.0%
ATCAGCTTCCCGTGCAAATA+TGG + chr4_2:75652257-75652276 None:intergenic 45.0%
CCTATAGTTGACTGAACCAG+GGG + chr4_2:75652285-75652304 None:intergenic 45.0%
CTCCTATAGTTGACTGAACC+AGG + chr4_2:75652287-75652306 None:intergenic 45.0%
CTGGTTCAGTCAACTATAGG+AGG - chr4_2:75652285-75652304 Msa0622920:CDS 45.0%
TACAGGTACATCTGGTGATC+AGG - chr4_2:75652464-75652483 Msa0622920:CDS 45.0%
GGCCCATCACAAAAATGAAG+AGG - chr4_2:75652485-75652504 Msa0622920:CDS 45.0%
!! CCGCCTCTTCATTTTTGTGA+TGG + chr4_2:75652491-75652510 None:intergenic 45.0%
AGCAGACAAATGACTGTCAG+TGG - chr4_2:75652570-75652589 Msa0622920:CDS 45.0%
!! GGAAAGATGGCAATTTTGGC+TGG + chr4_2:75652677-75652696 None:intergenic 45.0%
! TCAGAGTTAGCCTCAACAGA+GGG + chr4_2:75652765-75652784 None:intergenic 45.0%
GACTGATCCTTGTTCCGTAA+TGG - chr4_2:75652830-75652849 Msa0622920:CDS 45.0%
TCACACACCATTACGGAACA+AGG + chr4_2:75652840-75652859 None:intergenic 45.0%
TTTAGACTCTGAGCTTCAGG+AGG + chr4_2:75653029-75653048 None:intergenic 45.0%
TTACCAGACACTGCAACACA+TGG - chr4_2:75653203-75653222 Msa0622920:intron 45.0%
! CCCCAAACTTCAGAAGCTTT+TGG - chr4_2:75653745-75653764 Msa0622920:CDS 45.0%
GATCCTATGGGTGATAGTAC+AGG - chr4_2:75653839-75653858 Msa0622920:CDS 45.0%
! ATAGGACCTAAAGGTGTGAC+TGG + chr4_2:75654025-75654044 None:intergenic 45.0%
TGATTTCTCCCTGTTGGACA+AGG + chr4_2:75654089-75654108 None:intergenic 45.0%
TTCAGGTGATTTCTCCCTGT+TGG + chr4_2:75654095-75654114 None:intergenic 45.0%
GAGAAATCACCTGAAACACC+TGG - chr4_2:75654100-75654119 Msa0622920:CDS 45.0%
CTGAAACACCTGGATGTTGT+CGG - chr4_2:75654110-75654129 Msa0622920:CDS 45.0%
ACAGATCAACTTGATGCCCT+TGG - chr4_2:75654154-75654173 Msa0622920:CDS 45.0%
!! TTTTCGGGAACTAACGCCAA+GGG + chr4_2:75654173-75654192 None:intergenic 45.0%
AAAAACCCAAGAGGATGCAG+AGG - chr4_2:75654205-75654224 Msa0622920:intron 45.0%
AAAACCCAAGAGGATGCAGA+GGG - chr4_2:75654206-75654225 Msa0622920:intron 45.0%
! TGTCAACGACACTCCTCTTT+TGG - chr4_2:75654387-75654406 Msa0622920:intron 45.0%
! AACGACACTCCTCTTTTGGA+TGG - chr4_2:75654391-75654410 Msa0622920:intron 45.0%
! TCCTCTTTTGGATGGAAGTC+AGG - chr4_2:75654399-75654418 Msa0622920:intron 45.0%
ACCTGACTTCCATCCAAAAG+AGG + chr4_2:75654403-75654422 None:intergenic 45.0%
TGGAATTTCTCACCATAGGG+GGG + chr4_2:75654873-75654892 None:intergenic 45.0%
TGTTTCAGATGCTTTCCTGC+AGG + chr4_2:75655134-75655153 None:intergenic 45.0%
! TTCTAGGAGTGGAACACATC+AGG - chr4_2:75655413-75655432 Msa0622920:CDS 45.0%
GGCAACTACTTCCAGGTATT+TGG + chr4_2:75655453-75655472 None:intergenic 45.0%
AATACCTGGAAGTAGTTGCC+TGG - chr4_2:75655453-75655472 Msa0622920:CDS 45.0%
!! TCCTACTGCTAGAAAGTACC+AGG + chr4_2:75655474-75655493 None:intergenic 45.0%
! TGGTACTTTCTAGCAGTAGG+AGG - chr4_2:75655473-75655492 Msa0622920:CDS 45.0%
! GCGGGAACAAGGGTTTTTGT+TGG + chr4_2:75649984-75650003 None:intergenic 50.0%
GGAATTTCGGATCACGTCCA+TGG + chr4_2:75650084-75650103 None:intergenic 50.0%
CGTTCCGTTTGCGGGAATTT+CGG + chr4_2:75650097-75650116 None:intergenic 50.0%
! CCCGTTCCTGTTCCTTTTTG+TGG - chr4_2:75650287-75650306 Msa0622920:intron 50.0%
TCTACCTTGTGCTACCACCA+AGG - chr4_2:75650451-75650470 Msa0622920:intron 50.0%
AATAAATTCGCCTCGCACGG+AGG + chr4_2:75650478-75650497 None:intergenic 50.0%
GGGAATAAATTCGCCTCGCA+CGG + chr4_2:75650481-75650500 None:intergenic 50.0%
TACTTCCCGATCAGAATCGC+CGG + chr4_2:75650516-75650535 None:intergenic 50.0%
!!! GTTTTATGCTCCGTCGGTTC+TGG - chr4_2:75650547-75650566 Msa0622920:intron 50.0%
!!! CTGCCATTTTCCAGAACCGA+CGG + chr4_2:75650560-75650579 None:intergenic 50.0%
GGAAAATGGCAGTGTGAGGA+CGG - chr4_2:75650568-75650587 Msa0622920:intron 50.0%
TGAAAACGGCGATACACCTG+TGG - chr4_2:75650637-75650656 Msa0622920:intron 50.0%
ATACACCTGTGGATGATGCG+AGG - chr4_2:75650648-75650667 Msa0622920:intron 50.0%
TTGATCCTCGCATCATCCAC+AGG + chr4_2:75650656-75650675 None:intergenic 50.0%
TAGAAGCTAGCTGCGATGTG+AGG - chr4_2:75650798-75650817 Msa0622920:intron 50.0%
TAGCTGCGATGTGAGGAATG+TGG - chr4_2:75650805-75650824 Msa0622920:intron 50.0%
CGATGTGAGGAATGTGGAAG+AGG - chr4_2:75650811-75650830 Msa0622920:intron 50.0%
CTGAAAATTCAAGCGAGGGC+CGG - chr4_2:75650879-75650898 Msa0622920:intron 50.0%
ACATGTGCGACGGAGCTAAT+TGG - chr4_2:75651203-75651222 Msa0622920:CDS 50.0%
CGACGGAGCTAATTGGCTAT+TGG - chr4_2:75651210-75651229 Msa0622920:CDS 50.0%
CAAGAAGGTTATGGGAGGTC+AGG - chr4_2:75651399-75651418 Msa0622920:CDS 50.0%
TGCACCATGGGTGATACCAA+TGG - chr4_2:75651487-75651506 Msa0622920:CDS 50.0%
GCACCATGGGTGATACCAAT+GGG - chr4_2:75651488-75651507 Msa0622920:CDS 50.0%
TGATACCAATGGGCCAGAAC+TGG - chr4_2:75651498-75651517 Msa0622920:CDS 50.0%
! GGATCTGGCTGCAGATTTTC+TGG - chr4_2:75651615-75651634 Msa0622920:CDS 50.0%
GCTAAGGCTGCTGATCACAA+TGG - chr4_2:75651715-75651734 Msa0622920:CDS 50.0%
GTAACCTGGGATGTCTTTGC+AGG - chr4_2:75652223-75652242 Msa0622920:intron 50.0%
TGAACCTGCAAAGACATCCC+AGG + chr4_2:75652230-75652249 None:intergenic 50.0%
CCCCTGGTTCAGTCAACTAT+AGG - chr4_2:75652282-75652301 Msa0622920:CDS 50.0%
TCGGAGGAGTCTTGGAAAGA+TGG + chr4_2:75652690-75652709 None:intergenic 50.0%
TTGGCAATTCGGAGGAGTCT+TGG + chr4_2:75652698-75652717 None:intergenic 50.0%
CTTATCTGCACCCTCTGTTG+AGG - chr4_2:75652752-75652771 Msa0622920:CDS 50.0%
! CTCAGAGTTAGCCTCAACAG+AGG + chr4_2:75652766-75652785 None:intergenic 50.0%
GGTTCTCACCGGTGTAGTAT+TGG + chr4_2:75653345-75653364 None:intergenic 50.0%
!! AGGTTCTAAATCGCTGCCCA+TGG - chr4_2:75653509-75653528 Msa0622920:intron 50.0%
!! GGTTCTAAATCGCTGCCCAT+GGG - chr4_2:75653510-75653529 Msa0622920:intron 50.0%
TACACCTGCCTTGTCCAACA+GGG - chr4_2:75654078-75654097 Msa0622920:CDS 50.0%
CGACAACATCCAGGTGTTTC+AGG + chr4_2:75654112-75654131 None:intergenic 50.0%
!! CTTTTCGGGAACTAACGCCA+AGG + chr4_2:75654174-75654193 None:intergenic 50.0%
CTTGGCGTTAGTTCCCGAAA+AGG - chr4_2:75654172-75654191 Msa0622920:CDS 50.0%
AAAGCCCTCTGCATCCTCTT+GGG + chr4_2:75654213-75654232 None:intergenic 50.0%
AAGGTCTTGGGCAACCTCTT+CGG + chr4_2:75654314-75654333 None:intergenic 50.0%
GGTTGCCCAAGACCTTATGA+AGG - chr4_2:75654318-75654337 Msa0622920:intron 50.0%
ACCATAGGGGGGACACTATA+GGG + chr4_2:75654862-75654881 None:intergenic 50.0%
TTCAGGTGAAAGAAGCCTGC+AGG - chr4_2:75655116-75655135 Msa0622920:CDS 50.0%
AGTACCAGGCAACTACTTCC+AGG + chr4_2:75655460-75655479 None:intergenic 50.0%
! GCCTGGTACTTTCTAGCAGT+AGG - chr4_2:75655470-75655489 Msa0622920:CDS 50.0%
!! GTGTGTGATGGCGGGAACAA+GGG + chr4_2:75649994-75650013 None:intergenic 55.0%
!! TGTGTGTGATGGCGGGAACA+AGG + chr4_2:75649995-75650014 None:intergenic 55.0%
! TCTGCTCTGCTCTGCTGCTT+TGG + chr4_2:75650057-75650076 None:intergenic 55.0%
AGATCGGACGTTCCGTTTGC+GGG + chr4_2:75650105-75650124 None:intergenic 55.0%
GAGATCGGACGTTCCGTTTG+CGG + chr4_2:75650106-75650125 None:intergenic 55.0%
AGCTTTGCTGCGGGTGAATG+TGG + chr4_2:75650144-75650163 None:intergenic 55.0%
TGAACCGGACCAGATCTGAC+CGG + chr4_2:75650180-75650199 None:intergenic 55.0%
ACAGGAACGGGAACGGAAGA+GGG + chr4_2:75650278-75650297 None:intergenic 55.0%
AACAGGAACGGGAACGGAAG+AGG + chr4_2:75650279-75650298 None:intergenic 55.0%
! AGGTCCTTGGTGGTAGCACA+AGG + chr4_2:75650458-75650477 None:intergenic 55.0%
!! GCTCCGTCGGTTCTGGAAAA+TGG - chr4_2:75650554-75650573 Msa0622920:intron 55.0%
TGGCCCATTGGTATCACCCA+TGG + chr4_2:75651494-75651513 None:intergenic 55.0%
! AGATGCCAGTTCTGGCCCAT+TGG + chr4_2:75651506-75651525 None:intergenic 55.0%
GGGAAGCTGATCAAAACCCC+TGG - chr4_2:75652266-75652285 Msa0622920:CDS 55.0%
! GTTGCAGTGTCTGGTAACGC+AGG + chr4_2:75653200-75653219 None:intergenic 55.0%
CCACCATGTGTTGCAGTGTC+TGG + chr4_2:75653209-75653228 None:intergenic 55.0%
CCAGACACTGCAACACATGG+TGG - chr4_2:75653206-75653225 Msa0622920:intron 55.0%
GACACTGCAACACATGGTGG+TGG - chr4_2:75653209-75653228 Msa0622920:intron 55.0%
GTACACCTGCCTTGTCCAAC+AGG - chr4_2:75654077-75654096 Msa0622920:CDS 55.0%
TTCTCCCTGTTGGACAAGGC+AGG + chr4_2:75654085-75654104 None:intergenic 55.0%
GACAAGCTCCGACAACATCC+AGG + chr4_2:75654121-75654140 None:intergenic 55.0%
CAAAGCCCTCTGCATCCTCT+TGG + chr4_2:75654214-75654233 None:intergenic 55.0%
TCAGCTGCTAGATGCCGAAG+AGG - chr4_2:75654297-75654316 Msa0622920:intron 55.0%
CACCATAGGGGGGACACTAT+AGG + chr4_2:75654863-75654882 None:intergenic 55.0%
AGAGCAGAGCAGAGCAGCCA+TGG - chr4_2:75650064-75650083 Msa0622920:three_prime_UTR 60.0%
AATGTGGATGAGGCGGGTGG+CGG + chr4_2:75650128-75650147 None:intergenic 60.0%
GTGAATGTGGATGAGGCGGG+TGG + chr4_2:75650131-75650150 None:intergenic 60.0%
CGGGTGAATGTGGATGAGGC+GGG + chr4_2:75650134-75650153 None:intergenic 60.0%
GCGGGTGAATGTGGATGAGG+CGG + chr4_2:75650135-75650154 None:intergenic 60.0%
GCTGCGGGTGAATGTGGATG+AGG + chr4_2:75650138-75650157 None:intergenic 60.0%
GGTACGGTGAGCTTTGCTGC+GGG + chr4_2:75650153-75650172 None:intergenic 60.0%
GGGTACGGTGAGCTTTGCTG+CGG + chr4_2:75650154-75650173 None:intergenic 60.0%
AAAGCTCACCGTACCCGCTC+CGG - chr4_2:75650158-75650177 Msa0622920:three_prime_UTR 60.0%
AGATCTGACCGGAGCGGGTA+CGG + chr4_2:75650169-75650188 None:intergenic 60.0%
GGCTGTGCCTTAGAGCAGCT+TGG - chr4_2:75651736-75651755 Msa0622920:CDS 60.0%
GCCCTATAGTGTCCCCCCTA+TGG - chr4_2:75654858-75654877 Msa0622920:CDS 60.0%
!! ATGAGGCGGGTGGCGGAGAT+CGG + chr4_2:75650121-75650140 None:intergenic 65.0%
GTACCCGCTCCGGTCAGATC+TGG - chr4_2:75650168-75650187 Msa0622920:three_prime_UTR 65.0%
GGACCAGATCTGACCGGAGC+GGG + chr4_2:75650174-75650193 None:intergenic 65.0%
CGGACCAGATCTGACCGGAG+CGG + chr4_2:75650175-75650194 None:intergenic 65.0%
CGCTCCGGTCAGATCTGGTC+CGG - chr4_2:75650173-75650192 Msa0622920:three_prime_UTR 65.0%
TATTCCCCACTTGCCGGCGC+CGG - chr4_2:75650494-75650513 Msa0622920:intron 65.0%
CCTCGCACGGAGGTCCTTGG+TGG + chr4_2:75650468-75650487 None:intergenic 70.0%
CCACCAAGGACCTCCGTGCG+AGG - chr4_2:75650465-75650484 Msa0622920:intron 70.0%
TCGCCTCGCACGGAGGTCCT+TGG + chr4_2:75650471-75650490 None:intergenic 70.0%
!! AATCGCCGGCGCCGGCAAGT+GGG + chr4_2:75650502-75650521 None:intergenic 70.0%
CCGATCAGAATCGCCGGCGC+CGG + chr4_2:75650510-75650529 None:intergenic 70.0%
!! CCGGCGCCGGCGATTCTGAT+CGG - chr4_2:75650507-75650526 Msa0622920:intron 70.0%
!! CGGCGCCGGCGATTCTGATC+GGG - chr4_2:75650508-75650527 Msa0622920:intron 70.0%
!! ATCGCCGGCGCCGGCAAGTG+GGG + chr4_2:75650501-75650520 None:intergenic 75.0%
!! GAATCGCCGGCGCCGGCAAG+TGG + chr4_2:75650503-75650522 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 75649942 75655638 75649942 ID=Msa0622920;Name=Msa0622920
chr4_2 mRNA 75649942 75655638 75649942 ID=Msa0622920-mRNA-1;Parent=Msa0622920;Name=Msa0622920-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|0.88|1|1|1|9|264|1212
chr4_2 exon 75649942 75650286 75649942 ID=Msa0622920-mRNA-1:exon:22977;Parent=Msa0622920-mRNA-1
chr4_2 exon 75650361 75650459 75650361 ID=Msa0622920-mRNA-1:exon:22976;Parent=Msa0622920-mRNA-1
chr4_2 exon 75651160 75651857 75651160 ID=Msa0622920-mRNA-1:exon:22975;Parent=Msa0622920-mRNA-1
chr4_2 exon 75651967 75652069 75651967 ID=Msa0622920-mRNA-1:exon:22974;Parent=Msa0622920-mRNA-1
chr4_2 exon 75652225 75653111 75652225 ID=Msa0622920-mRNA-1:exon:22973;Parent=Msa0622920-mRNA-1
chr4_2 exon 75653233 75653335 75653233 ID=Msa0622920-mRNA-1:exon:22972;Parent=Msa0622920-mRNA-1
chr4_2 exon 75653626 75654212 75653626 ID=Msa0622920-mRNA-1:exon:22971;Parent=Msa0622920-mRNA-1
chr4_2 exon 75654447 75654537 75654447 ID=Msa0622920-mRNA-1:exon:22970;Parent=Msa0622920-mRNA-1
chr4_2 exon 75654649 75655638 75654649 ID=Msa0622920-mRNA-1:exon:22969;Parent=Msa0622920-mRNA-1
chr4_2 CDS 75654649 75655638 75654649 ID=Msa0622920-mRNA-1:cds;Parent=Msa0622920-mRNA-1
chr4_2 CDS 75654447 75654537 75654447 ID=Msa0622920-mRNA-1:cds;Parent=Msa0622920-mRNA-1
chr4_2 CDS 75653626 75654212 75653626 ID=Msa0622920-mRNA-1:cds;Parent=Msa0622920-mRNA-1
chr4_2 CDS 75653233 75653335 75653233 ID=Msa0622920-mRNA-1:cds;Parent=Msa0622920-mRNA-1
chr4_2 CDS 75652225 75653111 75652225 ID=Msa0622920-mRNA-1:cds;Parent=Msa0622920-mRNA-1
chr4_2 CDS 75651967 75652069 75651967 ID=Msa0622920-mRNA-1:cds;Parent=Msa0622920-mRNA-1
chr4_2 CDS 75651160 75651857 75651160 ID=Msa0622920-mRNA-1:cds;Parent=Msa0622920-mRNA-1
chr4_2 CDS 75650361 75650459 75650361 ID=Msa0622920-mRNA-1:cds;Parent=Msa0622920-mRNA-1
chr4_2 CDS 75650206 75650286 75650206 ID=Msa0622920-mRNA-1:cds;Parent=Msa0622920-mRNA-1
chr4_2 three_prime_UTR 75649942 75650205 75649942 ID=Msa0622920-mRNA-1:three_prime_utr;Parent=Msa0622920-mRNA-1
Gene Sequence

>Msa0622920

TTGGATTTTTATCAGAAATCACGCCACAAAATTTTCCCGCCAACAAAAACCCTTGTTCCCGCCATCACACACACATATATAAACAGCGCGCCAATTTTCACACATTTCGAGACCAAAGCAGCAGAGCAGAGCAGAGCAGCCATGGACGTGATCCGAAATTCCCGCAAACGGAACGTCCGATCTCCGCCACCCGCCTCATCCACATTCACCCGCAGCAAAGCTCACCGTACCCGCTCCGGTCAGATCTGGTCCGGTTCAAGTTCCGTTTCAAGTTCCCGCAGCAAAAAGAATCAACCATACTCAGTTCCGGTTCAAGTTCCGTTTCAAGAGGAACCCTCTTCCGTTCCCGTTCCTGTTCCTTTTTGTGGAAACGATGTAACCAAAGGACTTTCAGATTCGGAATTCAAGAATCTAATTCATGATATTTGCAATGAATATTGTGAATCAGATTCCGAAGATGACGATCTTGTTAAGGATCCTTTCAAGAAAGCAAAACGTGATGATGCTAATCTACCTTGTGCTACCACCAAGGACCTCCGTGCGAGGCGAATTTATTCCCCACTTGCCGGCGCCGGCGATTCTGATCGGGAAGTAGCTGAATTAGGGTTTTATGCTCCGTCGGTTCTGGAAAATGGCAGTGTGAGGACGGAATCAGCTGAAATTTCTGAATTAGGGTTTGGATCGCCATCAATTGCTGAAAACGGCGATACACCTGTGGATGATGCGAGGATCAAATCTAATAAGATTCTCGACGAGCCTCTGAATTTTGATAGGGGAATCACCAAGCTGTCAGATGAAGATTTGGGCGAAGAATCATTACAAACGACACCACCTAATGATGTCATCTATGTAGGTTTAGAAGCTAGCTGCGATGTGAGGAATGTGGAAGAGGCAGACACACTTGTTGTCAAAGATATGTCTCCTGCTGCTAATGTAGCTGAAAATTCAAGCGAGGGCCGGAAAAATAGCTCTGTTCAAAGGAGTAAATCTGTACTCAAACCGCGTTTACCTTTGAAATTGTTCAAAGCCCCAGGTTCATTCAATTACAAAAGGCTAATGGATGCTATGGGAGATAATTTCGGAATACCGAAATTGGGTCATTGTCATGAAGACAAGAAGGTTATGGGAGGTCAGGGATTGAAACTTCCTTTGACATCTGATAATCATGAAGGTTCTAAGCCTGAAACTAAGATTGATAGTTGCACCATGGGTGATACCAATGGGCCAGAACTGGCATCTTCACCAATGCAAGTAGATACTGAGAAAGTGAATGGCGAGTGTTTATCTGTGCCATCTGTGGATGATAAATGCTTGAGTGAATCAAAGGTGGATCTGGCTGCAGATTTTCTGGGTGCTAGAGATGTTGGTAATGCTTTCGACCACGGTGATGTTAAGCAAGATTCTTTCAACAGGAATAATCTTGACTGTGCTAAGGCTGCTGATCACAATGGCTGTGCCTTAGAGCAGCTTGGTGTTTTGAATGAAGATTGTATACCAATGACCCGTGATACTGAAATATGTGATGATATTGTGCTCAATGGAGACCAAATGCAGAGCATACCTCAGAATGTCAAACCTATGGATCTGACCAGAAACACTCAAGAAAGCACTGTTGAAGCGTTATACCCCAAAGCCCATAAGAGAAATAATCCACTCAAGAGCAAACATGTTCATAAACCATATTTGCACGGGAAGCTGATCAAAACCCCTGGTTCAGTCAACTATAGGAGGTTGCTTCCATATTTTAAGAATCTTCCCAAAGATGACTATGGTACATCTGGTGATCAGGCCCATCACAAAAATGAAGAGGCGGATTTATATGCAAAGGAGTTCCAACTTCCTTTGCCATCTCAAAGTGAAGAAGCTTCTATTAGCAGACAAATGACTGTCAGTGGCTCTATCCATGACAAAGTTGACTTGAATACTTTGGAAAACAACATCTCAGTCAATCCTGCTAATATGTCATCTCATGGCTACCAGCCAAAATTGCCATCTTTCCAAGACTCCTCCGAATTGCCAATACAATTTGACGCAAAAGAAATGGCACATGAGTGCTTATCTGCACCCTCTGTTGAGGCTAACTCTGAGAAAACTGTCATCAGTTCTAAAGATGAATGCTTGAGTGAATCAGCGACTGATCCTTGTTCCGTAATGGTGTGTGATAAGATTGTCACAAATGGTGGGTCACCACCCAAAGAACAAAATTTGCTTAATGTCAATAATGATATCTCCAACCTTTCATTTGAGCATCATTCAAGCAATGAGAAAGGATTCACTGAAAGAAAGCAGTTTGTGAGTCTGGAGAAGCATGAATCTGTTAGCAGATGTCCTCCTGAAGCTCAGAGTCTAAATCAATTGGATCCTAATATGTTAGATGCTGAAGAGAATGAAACAAGCAGCCATGCAATTTGCAAAAATGACGATGTTGTGGTTTTATGTCACGTCACCATCTCAAATGAAGAATCTAGTTCACAATCAGAGAAGATTATTTCTGAAAAACCTGCGTTACCAGACACTGCAACACATGGTGGTGGCAAAGAAAAAAGTCTTCTGAATGGCCTAGTTAATGGTTCAAAGATGCCTTCAAAAGGAAGCAATAACAAAAAGGCTAGTTTTGCTGGTGAGATGAAAAATGGTTTGGAATCCAATACTACACCGGTTCTAAATCGCTGCCCATGGGTTAAGTTTTTAAAACATGCTGGGTCTTTGAACTACAAAAGATTGCTTCCGATTTTGTTGGAAAATGAGAAGTCTAATTCCTGTGCTTCGAATAATGATCATCGCCCCAAACTTCAGAAGCTTTTGGATCACACACCATTTCTGCCAATTTCAGATTCAAACTTGCAAGTAACTCCTGGAAGTGATTCAAATGATTGTGATCCTATGGGTGATAGTACAGGAAATTCTGGTGCTCAGCAAGAAACAGAGTTGCAAGCTTGTGACTTAAATAGTGATAGTTTAAGCCCAAGATCTCAACTACAAGATAAACAGATTGTGTCAAATAGACCCTACTATCTCGAGAACTCCTTTGTTTCACCAATTTCTGTTCATAGAGATTTACCAGTCACACCTTTAGGTCCTATAGCTGATCAAGTTGTCACTAGAGAAGAAGTGGGTACACCTGCCTTGTCCAACAGGGAGAAATCACCTGAAACACCTGGATGTTGTCGGAGCTTGTCCGAAATGAAAGTCACAGATCAACTTGATGCCCTTGGCGTTAGTTCCCGAAAAGGAATTTTGAGAAAAAACCCAAGAGGATGCAGAGGGCTTTGCACATGTTTGAACTGTGTTTCTTTTCGCCTTCATGCAGAAAGAGCATTTGAATTTTCTAGAAATCAGCTGCTAGATGCCGAAGAGGTTGCCCAAGACCTTATGAAGGAAGTATCCCATCTCAGAAACATGTTGTTAGAAAGATGTACTGATAATGTCAACGACACTCCTCTTTTGGATGGAAGTCAGGTGAAAGAAGCCTGCAGGAAAGCATCTGAAACAGAACAACTTGCAAAGGATCGACTTAGCCAGATGAATGATGATCTTAACATACATTGCAGAACACCTAGTCTGCAGCGACCAAGTGTTAAGTTTTCAGATCGTGTTGAGGAAAAGGTCATTCAACCAAACAGATTAAAAAATGGTTAA
Protein sequence

>Msa0622920

LDFYQKSRHKIFPPTKTLVPAITHTYINSAPIFTHFETKAAEQSRAAMDVIRNSRKRNVRSPPPASSTFTRSKAHRTRSGQIWSGSSSVSSSRSKKNQPYSVPVQVPFQEEPSSVPVPVPFCGNDVTKGLSDSEFKNLIHDICNEYCESDSEDDDLVKDPFKKAKRDDANLPCATTKDLRARRIYSPLAGAGDSDREVAELGFYAPSVLENGSVRTESAEISELGFGSPSIAENGDTPVDDARIKSNKILDEPLNFDRGITKLSDEDLGEESLQTTPPNDVIYVGLEASCDVRNVEEADTLVVKDMSPAANVAENSSEGRKNSSVQRSKSVLKPRLPLKLFKAPGSFNYKRLMDAMGDNFGIPKLGHCHEDKKVMGGQGLKLPLTSDNHEGSKPETKIDSCTMGDTNGPELASSPMQVDTEKVNGECLSVPSVDDKCLSESKVDLAADFLGARDVGNAFDHGDVKQDSFNRNNLDCAKAADHNGCALEQLGVLNEDCIPMTRDTEICDDIVLNGDQMQSIPQNVKPMDLTRNTQESTVEALYPKAHKRNNPLKSKHVHKPYLHGKLIKTPGSVNYRRLLPYFKNLPKDDYGTSGDQAHHKNEEADLYAKEFQLPLPSQSEEASISRQMTVSGSIHDKVDLNTLENNISVNPANMSSHGYQPKLPSFQDSSELPIQFDAKEMAHECLSAPSVEANSEKTVISSKDECLSESATDPCSVMVCDKIVTNGGSPPKEQNLLNVNNDISNLSFEHHSSNEKGFTERKQFVSLEKHESVSRCPPEAQSLNQLDPNMLDAEENETSSHAICKNDDVVVLCHVTISNEESSSQSEKIISEKPALPDTATHGGGKEKSLLNGLVNGSKMPSKGSNNKKASFAGEMKNGLESNTTPVLNRCPWVKFLKHAGSLNYKRLLPILLENEKSNSCASNNDHRPKLQKLLDHTPFLPISDSNLQVTPGSDSNDCDPMGDSTGNSGAQQETELQACDLNSDSLSPRSQLQDKQIVSNRPYYLENSFVSPISVHRDLPVTPLGPIADQVVTREEVGTPALSNREKSPETPGCCRSLSEMKVTDQLDALGVSSRKGILRKNPRGCRGLCTCLNCVSFRLHAERAFEFSRNQLLDAEEVAQDLMKEVSHLRNMLLERCTDNVNDTPLLDGSQVKEACRKASETEQLAKDRLSQMNDDLNIHCRTPSLQRPSVKFSDRVEEKVIQPNRLKNG*