AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0654720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0654720 MtrunA17_Chr4g0051671 93.977 963 40 3 1 962 1 946 0.0 1850
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0654720 AT4G20910.1 48.079 963 454 14 8 957 1 930 0.0 831
Msa0654720 AT4G20910.2 48.079 963 454 14 8 957 1 930 0.0 831
Msa0654720 AT4G20920.3 41.176 799 386 18 8 776 1 745 3.68e-175 528
Msa0654720 AT4G20920.4 41.176 799 386 18 8 776 1 745 3.68e-175 528
Msa0654720 AT4G20920.2 41.176 799 386 18 8 776 1 745 3.68e-175 528
Msa0654720 AT4G20920.5 40.551 799 375 19 8 776 1 729 2.45e-167 507
Msa0654720 AT4G20920.1 40.551 799 375 19 8 776 1 729 2.45e-167 507

Find 244 sgRNAs with CRISPR-Local

Find 585 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCATTGCAGCTTGATTT+TGG 0.099534 4_3:-62994096 Msa0654720:intron
ACTACATTGTATTCAAAATT+TGG 0.173974 4_3:+62991699 None:intergenic
CGTCCAATTCTTCTTGTTCT+TGG 0.180888 4_3:+62991652 None:intergenic
TCCTAGCATCCATTCTATTT+TGG 0.191249 4_3:+62991276 None:intergenic
CTTTATAATAAAATAATAAT+AGG 0.207055 4_3:+62991086 None:intergenic
AGAATGGATGCTAGGAAATA+AGG 0.232976 4_3:-62991269 Msa0654720:three_prime_UTR
GAAGATCAAGCTTGTCTCTT+TGG 0.252238 4_3:-62991771 Msa0654720:CDS
GTGAAATAAAGTTGCTTTCT+CGG 0.254391 4_3:-62995064 Msa0654720:CDS
CTCTGGAGGTTCTGCAACTT+TGG 0.257411 4_3:+62994283 None:intergenic
AAGATCAAGCTTGTCTCTTT+GGG 0.262347 4_3:-62991770 Msa0654720:CDS
GAATGAATGTGTATGAAATT+AGG 0.270910 4_3:+62999715 None:intergenic
GTAGCAGCCCTTACTATATA+TGG 0.276604 4_3:+62996573 None:intergenic
TTTCTATACAGGATGCTTCT+AGG 0.281845 4_3:-62995392 Msa0654720:intron
TGTCCAAAGCAATCAGATTC+AGG 0.283086 4_3:-62995098 Msa0654720:CDS
TTACAAGACATGTTAGTAAA+TGG 0.283885 4_3:-62994762 Msa0654720:CDS
TAACTGTTCGGTTATATTAC+AGG 0.285137 4_3:-62995986 Msa0654720:intron
AATGAATGTGTATGAAATTA+GGG 0.290670 4_3:+62999716 None:intergenic
ATAGCCATTATAATGTAATA+TGG 0.293113 4_3:-62991398 Msa0654720:CDS
CAGACAGCAATGACAGAAAT+AGG 0.302121 4_3:+62996666 None:intergenic
TCTATAATATCTTGTGGATA+TGG 0.304654 4_3:+62996492 None:intergenic
ATTCCCATATTACATTATAA+TGG 0.306928 4_3:+62991394 None:intergenic
GCCAACGGGGCCTCTGTAAA+TGG 0.312707 4_3:-62995122 Msa0654720:CDS
GATTTACCACAAGAGTTAAC+TGG 0.321328 4_3:-62995304 Msa0654720:CDS
TTACATCTGAACAACATATC+TGG 0.321631 4_3:-62996530 Msa0654720:CDS
TATTAGTTATTCAGTATCTT+TGG 0.322059 4_3:-62994673 Msa0654720:CDS
AAGCTGGATGTTTAAATGTT+AGG 0.323336 4_3:-62991171 Msa0654720:three_prime_UTR
AGATATTATAGAGTCGTTAA+TGG 0.324864 4_3:-62996481 Msa0654720:CDS
ATCCGCTCAGTGGTCACATT+CGG 0.329096 4_3:-62996728 Msa0654720:CDS
GTAGAAACAATAAGAATCTT+TGG 0.332039 4_3:+62991723 None:intergenic
TTCAACAACAACAAACCTTT+AGG 0.337261 4_3:-62999692 Msa0654720:intron
TTTGAGAGGATGACTTATAA+TGG 0.337624 4_3:+62995211 None:intergenic
GCCTGCTCCATTCTTTCCTC+TGG 0.340683 4_3:+62994266 None:intergenic
GAACAGGGACAGTACGCTTT+TGG 0.347063 4_3:-62999867 Msa0654720:five_prime_UTR
GTTCTTGTCCCACCAGCATC+TGG 0.347189 4_3:+62992736 None:intergenic
GTTCCCCTGAGGATTGTTAT+AGG 0.348614 4_3:-62995019 Msa0654720:CDS
AGTATTGATAGGTTTAGTTA+AGG 0.353379 4_3:-62991240 Msa0654720:three_prime_UTR
GTATTATAGCCTTCGGTGTA+AGG 0.357215 4_3:+62998959 None:intergenic
AGAAGATAAGGACGGCATTA+TGG 0.360060 4_3:+62994464 None:intergenic
ACTGGAGGGGTTCCCTTCCT+AGG 0.364152 4_3:-62995286 Msa0654720:CDS
GTTGAGGCCATACGCATTCC+TGG 0.367253 4_3:-62996429 Msa0654720:CDS
ATTCTTCTTGTTCTTGGGTA+GGG 0.367654 4_3:+62991658 None:intergenic
TGGTCCTTCCATATATAGTA+AGG 0.370607 4_3:-62996581 Msa0654720:CDS
CAATGATTCCGTTACGGAAC+AGG 0.381093 4_3:-62999883 Msa0654720:five_prime_UTR
AGGTTGCATGGGTTTGATAT+TGG 0.381505 4_3:-62992661 Msa0654720:CDS
TACCCAAGAACAAGAAGAAT+TGG 0.381585 4_3:-62991655 Msa0654720:CDS
ATCCCTGAATCTGATTGCTT+TGG 0.384080 4_3:+62995095 None:intergenic
GTCCAATTCTTCTTGTTCTT+GGG 0.384367 4_3:+62991653 None:intergenic
TGATATTGGTACTTGTTTAG+AGG 0.385962 4_3:-62992647 Msa0654720:intron
AGCTTGTCTCTTTGGGGATG+TGG 0.389014 4_3:-62991763 Msa0654720:CDS
AGAATCACATGCTACTACTT+TGG 0.389905 4_3:-62994186 Msa0654720:intron
AATGTGGAGTTTAGTGGGGT+TGG 0.390171 4_3:-62991519 Msa0654720:CDS
AGCTGTGAGTAGTGCCTCTC+TGG 0.390358 4_3:+62995340 None:intergenic
TGTGGCTCCAATAGGAATAT+AGG 0.393034 4_3:-62996224 Msa0654720:intron
GCTATAATACACCAAAAGTT+TGG 0.393808 4_3:-62998946 Msa0654720:CDS
GATATCATTGCAAATGAACT+TGG 0.395132 4_3:-62996345 Msa0654720:CDS
AGCTGGATGTTTAAATGTTA+GGG 0.395314 4_3:-62991170 Msa0654720:three_prime_UTR
CTCTGGTCCACTCAAATTTG+TGG 0.398261 4_3:+62991589 None:intergenic
TAGAATGAAATGAAGTGTTA+AGG 0.401342 4_3:+62999769 None:intergenic
CTTATATAGTTCTGATTGCT+TGG 0.402909 4_3:-62991314 Msa0654720:three_prime_UTR
GTGGAGTTTAGTGGGGTTGG+TGG 0.404034 4_3:-62991516 Msa0654720:CDS
TCCGCTCAGTGGTCACATTC+GGG 0.404773 4_3:-62996727 Msa0654720:CDS
TGCTTCTAGGGAAGACTCCC+GGG 0.405633 4_3:-62995379 Msa0654720:CDS
TAGAGATCCTTCAAAATGAA+TGG 0.409255 4_3:+62996112 None:intergenic
TGGTGTTGATATTTCACAAA+AGG 0.412817 4_3:-62994010 Msa0654720:CDS
GTATTGATAGGTTTAGTTAA+GGG 0.413972 4_3:-62991239 Msa0654720:three_prime_UTR
TTCTTCTTGTTCTTGGGTAG+GGG 0.415292 4_3:+62991659 None:intergenic
GAAACTTGCATGACTGTAAG+AGG 0.415750 4_3:+62991622 None:intergenic
AATTCTTCTTGTTCTTGGGT+AGG 0.417688 4_3:+62991657 None:intergenic
TTATTCAGTATCTTTGGTTG+TGG 0.422053 4_3:-62994667 Msa0654720:CDS
ACTCTTGTGGTAAATCTTGA+AGG 0.423724 4_3:+62995311 None:intergenic
TGATTCACAAGAATGCATTC+AGG 0.428117 4_3:-62996451 Msa0654720:CDS
AATGAGTTTGAGTTTGAGAT+TGG 0.429249 4_3:-62994609 Msa0654720:CDS
TAAGGGAAGGAAGTATTGAT+AGG 0.429443 4_3:-62991251 Msa0654720:three_prime_UTR
GAATGGATGCTAGGAAATAA+GGG 0.429592 4_3:-62991268 Msa0654720:three_prime_UTR
AATTATAATGTGGAGTTTAG+TGG 0.438708 4_3:-62991525 Msa0654720:CDS
TTCAGTATCTTTGGTTGTGG+AGG 0.439928 4_3:-62994664 Msa0654720:CDS
ATTATAATGTGGAGTTTAGT+GGG 0.440196 4_3:-62991524 Msa0654720:CDS
TGCTTCCTATAACAATCCTC+AGG 0.441318 4_3:+62995014 None:intergenic
CATGGACAGACACCAGAGTC+TGG 0.442267 4_3:+62994714 None:intergenic
AATGCAGGTGATTGAACATA+TGG 0.443555 4_3:-62991796 Msa0654720:intron
GGGCCAATGTTCTGATTTCA+AGG 0.444876 4_3:-62996311 Msa0654720:intron
AAATGTTAGGGTCTTCCCCT+AGG 0.447554 4_3:-62991158 Msa0654720:three_prime_UTR
TGCTCCATTCTTTCCTCTGG+AGG 0.447746 4_3:+62994269 None:intergenic
GCAAGGGCAAGATACTTGTC+TGG 0.448127 4_3:-62996086 Msa0654720:CDS
ACTTCGCTGGAGAAAATTGC+TGG 0.452004 4_3:-62994030 Msa0654720:CDS
AAAGAGTGGAAGACGAAAGA+GGG 0.453219 4_3:+62999794 None:intergenic
TACACTGCATTGCATAAAGA+TGG 0.458498 4_3:+62994817 None:intergenic
CAACCAGTGGGCATCTGACT+TGG 0.460111 4_3:-62991559 Msa0654720:CDS
CATACGCATTCCTGGTTCAA+TGG 0.462240 4_3:-62996421 Msa0654720:CDS
GTTCATTTGCAATGATATCA+AGG 0.464150 4_3:+62996349 None:intergenic
CAATTACAATCTCTCTGAAA+AGG 0.464973 4_3:+62994859 None:intergenic
GAGGTTCAGACAGGCGATGC+TGG 0.468726 4_3:+62995240 None:intergenic
TCTTCTTGTTCTTGGGTAGG+GGG 0.468837 4_3:+62991660 None:intergenic
TCGTGTTGAAATAAGCATAC+TGG 0.468944 4_3:+62994532 None:intergenic
CCACTGGTTGAACTGTTCTC+TGG 0.472971 4_3:+62991572 None:intergenic
ATGTGATTGAATGTGCCAAC+GGG 0.477723 4_3:-62995136 Msa0654720:CDS
ACAAGAATGCATTCAGGTTG+AGG 0.478281 4_3:-62996445 Msa0654720:CDS
GTCACATTCGGGCTAGTTTG+AGG 0.478959 4_3:-62996716 Msa0654720:CDS
TTCTATACAGGATGCTTCTA+GGG 0.481021 4_3:-62995391 Msa0654720:intron
GACTGCTGATCTTACTCCTC+AGG 0.481482 4_3:-62997728 Msa0654720:CDS
AACGGATTTGACTCCACCTC+AGG 0.481788 4_3:+62996606 None:intergenic
TTTAAACTTCATGTCACCCT+AGG 0.482852 4_3:+62991141 None:intergenic
TAGCCATTATAATGTAATAT+GGG 0.483058 4_3:-62991397 Msa0654720:CDS
CTTGTCACAACTGTAAGTTC+TGG 0.483370 4_3:+62998811 None:intergenic
GTCTCATAGAGCCGTTCAAA+AGG 0.485529 4_3:+62994918 None:intergenic
ATGCTTCTAGGGAAGACTCC+CGG 0.486091 4_3:-62995380 Msa0654720:CDS
AATGAACTTGGGTTAGAAGA+TGG 0.487425 4_3:-62996333 Msa0654720:CDS
GTCTCTCAAAATGAATGTCC+AGG 0.487786 4_3:-62998886 Msa0654720:CDS
TATCTATATCAGTATGCGTC+TGG 0.487812 4_3:+62991418 None:intergenic
GAACGGCTCTATGAGACTGC+AGG 0.489975 4_3:-62994912 Msa0654720:CDS
TCCACTCGTTGCTTCGAAAG+TGG 0.491008 4_3:+62994230 None:intergenic
AAAAGAGTGGAAGACGAAAG+AGG 0.491175 4_3:+62999793 None:intergenic
AGAAGACAACCAAAATAGAA+TGG 0.492848 4_3:-62991285 Msa0654720:three_prime_UTR
TCAGTATCTTTGGTTGTGGA+GGG 0.493622 4_3:-62994663 Msa0654720:CDS
CATGACTTTGATGATTCAGT+TGG 0.494187 4_3:+62995185 None:intergenic
CCTCATTGAAACTTCTATCA+TGG 0.495677 4_3:-62994971 Msa0654720:CDS
GGTGTTGATATTTCACAAAA+GGG 0.495830 4_3:-62994009 Msa0654720:CDS
TATAGAGTCGTTAATGGAAG+AGG 0.498379 4_3:-62996475 Msa0654720:CDS
ATAGCCTTCGGTGTAAGGGC+TGG 0.499378 4_3:+62998964 None:intergenic
TGCTCGACAATCATATCTAC+TGG 0.502229 4_3:-62996168 Msa0654720:CDS
ATGAGTTTGAGTTTGAGATT+GGG 0.503837 4_3:-62994608 Msa0654720:CDS
TTTGAGTTTGAGATTGGGGT+TGG 0.504481 4_3:-62994603 Msa0654720:CDS
TCAGATATAAGAAACTGTAT+AGG 0.505367 4_3:+62996753 None:intergenic
GTTTGCAGCTTAAAGATTGA+AGG 0.507154 4_3:-62994738 Msa0654720:CDS
ATGAACTTGGGTTAGAAGAT+GGG 0.510409 4_3:-62996332 Msa0654720:CDS
ATGTGGATCTGGAAGCTTGT+TGG 0.511656 4_3:-62994073 Msa0654720:CDS
GGATAATTTGTAAATTCCCC+CGG 0.513841 4_3:+62995361 None:intergenic
TCTACGAGGATGTAACTGTT+CGG 0.516452 4_3:-62995998 Msa0654720:CDS
ATAAAGATGGCCATTCTGAA+TGG 0.516494 4_3:+62994830 None:intergenic
AAATGCTTGCTATGTGGTAG+AGG 0.517443 4_3:-62998920 Msa0654720:CDS
TTGCTGTGTTCAAAAGAGAA+TGG 0.518521 4_3:-62991458 Msa0654720:CDS
GGGTCTTACACGGGCTGCAA+AGG 0.518931 4_3:-62993989 Msa0654720:intron
TCCAGAGGAAAGAATGGAGC+AGG 0.519203 4_3:-62994267 Msa0654720:CDS
GCTAAATTACACAACTTCGC+TGG 0.527947 4_3:-62994043 Msa0654720:CDS
TGAGTTTGAGTTTGAGATTG+GGG 0.529855 4_3:-62994607 Msa0654720:CDS
GAAACTGTATAGGTGATGAA+TGG 0.530893 4_3:+62996763 None:intergenic
TGTAATGAATTTGCACACAT+TGG 0.532539 4_3:+62994780 None:intergenic
TTAAACTTCATGTCACCCTA+GGG 0.533301 4_3:+62991142 None:intergenic
AATATCAAACCCATGCAACC+TGG 0.534074 4_3:+62992663 None:intergenic
CTGGAGGGGTTCCCTTCCTA+GGG 0.534132 4_3:-62995285 Msa0654720:CDS
ATATCATTGCAAATGAACTT+GGG 0.536376 4_3:-62996344 Msa0654720:CDS
AGAGCAATCTGCTGCGGAGA+TGG 0.537240 4_3:-62998764 Msa0654720:CDS
TAGCAGCAATGATTCCGTTA+CGG 0.538804 4_3:-62999889 Msa0654720:five_prime_UTR
ATTATAATGTAATATGGGAA+TGG 0.539053 4_3:-62991392 Msa0654720:CDS
TACAAAGAATATCCCTAGGA+AGG 0.539793 4_3:+62995273 None:intergenic
TTGAAGGATCTCTAAATGCA+AGG 0.539876 4_3:-62996103 Msa0654720:CDS
AAGTAACTCACTAGAAGATA+AGG 0.540577 4_3:+62994452 None:intergenic
GTTTAAAAGAATACACATGA+TGG 0.541342 4_3:-62991125 Msa0654720:three_prime_UTR
TGCTGTGATTTCATTCATTG+AGG 0.544473 4_3:-62994580 Msa0654720:CDS
AACGACTCTATAATATCTTG+TGG 0.544982 4_3:+62996486 None:intergenic
GTCCAAAGCAATCAGATTCA+GGG 0.545820 4_3:-62995097 Msa0654720:CDS
TCGAGCAGCAAAGAACAGTC+TGG 0.546354 4_3:+62996184 None:intergenic
TTAGATGCAAATCCAGATGC+TGG 0.546622 4_3:-62992748 Msa0654720:CDS
ACTCGTTGCTTCGAAAGTGG+AGG 0.548386 4_3:+62994233 None:intergenic
AAGATTGAAGGTCCAGACTC+TGG 0.551436 4_3:-62994726 Msa0654720:CDS
AATGTTAGGGTCTTCCCCTA+GGG 0.552157 4_3:-62991157 Msa0654720:three_prime_UTR
ATAGAGTCGTTAATGGAAGA+GGG 0.553839 4_3:-62996474 Msa0654720:CDS
GGATAGAGTCTGAAATTGCT+AGG 0.555935 4_3:-62991218 Msa0654720:three_prime_UTR
TGAAGGATCTCTAAATGCAA+GGG 0.558644 4_3:-62996102 Msa0654720:CDS
AAATGTTCTGAGCTTTCTCA+TGG 0.559344 4_3:-62999022 Msa0654720:exon
TATTATAGCCTTCGGTGTAA+GGG 0.559881 4_3:+62998960 None:intergenic
GGTCCTTCCATATATAGTAA+GGG 0.560300 4_3:-62996580 Msa0654720:CDS
CAGCCAAGTCAGATGCCCAC+TGG 0.560908 4_3:+62991556 None:intergenic
TATTTCATACTCCACACAGC+AGG 0.561668 4_3:+62994313 None:intergenic
TCCATTTACAGAGGCCCCGT+TGG 0.563920 4_3:+62995121 None:intergenic
ACCACAAGAGTTAACTGGAG+GGG 0.564091 4_3:-62995299 Msa0654720:CDS
GCAATCTGTGAAGCAAAACC+TGG 0.572230 4_3:+62991477 None:intergenic
CATTGAACCAGGAATGCGTA+TGG 0.572396 4_3:+62996422 None:intergenic
ACCCCTCCAGTTAACTCTTG+TGG 0.573297 4_3:+62995298 None:intergenic
TGTGGTAGAGGAAGTGAAAG+AGG 0.575307 4_3:-62998908 Msa0654720:CDS
TTGTCTGGGCAAGATATAGT+TGG 0.579218 4_3:-62996071 Msa0654720:CDS
GTTGTGATGCAGATGTCTGT+TGG 0.579624 4_3:-62994555 Msa0654720:CDS
TTTCACAAAAGGGTCTTACA+CGG 0.579841 4_3:-62993999 Msa0654720:CDS
AGAACCTCCAGAGGAAAGAA+TGG 0.579935 4_3:-62994273 Msa0654720:CDS
TCTGGTGTCTGTCCATGCAA+TGG 0.586141 4_3:-62994708 Msa0654720:CDS
TGGAAAAGAGAGGTTCAGAC+AGG 0.589880 4_3:+62995231 None:intergenic
AAGAACAAGAAGAATTGGAC+GGG 0.591882 4_3:-62991650 Msa0654720:CDS
GTACTGTCCCTGTTCCGTAA+CGG 0.592334 4_3:+62999875 None:intergenic
CTCGTTGCTTCGAAAGTGGA+GGG 0.592685 4_3:+62994234 None:intergenic
TGTGATTTCATTCATTGAGG+AGG 0.593480 4_3:-62994577 Msa0654720:CDS
ATACCTTGAAATCAGAACAT+TGG 0.594025 4_3:+62996308 None:intergenic
GACAATCATATCTACTGGAT+CGG 0.594881 4_3:-62996163 Msa0654720:CDS
GTCTGAGGAATGCTTAACCC+TGG 0.596255 4_3:+62998868 None:intergenic
TTATAATGTGGAGTTTAGTG+GGG 0.596456 4_3:-62991523 Msa0654720:CDS
CAAGGTAAAGATCCATTGCA+TGG 0.596851 4_3:+62994696 None:intergenic
AAAGTTGCTTTCTCGGTGTG+CGG 0.598256 4_3:-62995057 Msa0654720:CDS
TAAAGAGATGGCCTCGTCTG+AGG 0.598998 4_3:+62998853 None:intergenic
TGAACTTGGGTTAGAAGATG+GGG 0.600500 4_3:-62996331 Msa0654720:CDS
ATTGGTCAATCCATTCAGAA+TGG 0.601077 4_3:-62994840 Msa0654720:CDS
CTGGAAGCTGCAGTGTGCAA+CGG 0.601473 4_3:+62998830 None:intergenic
AATGATTCCGTTACGGAACA+GGG 0.602166 4_3:-62999882 Msa0654720:five_prime_UTR
ACCAAAATAGAATGGATGCT+AGG 0.603967 4_3:-62991277 Msa0654720:three_prime_UTR
GATGCAATCTTAGCATGCAT+CGG 0.605209 4_3:-62996047 Msa0654720:CDS
AAGTCAGTTATTCTTTACGA+AGG 0.605710 4_3:-62992706 Msa0654720:CDS
CAAGGGCAAGATACTTGTCT+GGG 0.609993 4_3:-62996085 Msa0654720:CDS
TGCGGAGATGGCTATAGAGA+AGG 0.612624 4_3:-62998752 Msa0654720:intron
ACAAAGAATATCCCTAGGAA+GGG 0.615809 4_3:+62995274 None:intergenic
CAAGAACAAGAAGAATTGGA+CGG 0.620185 4_3:-62991651 Msa0654720:CDS
TTCACAAAAGGGTCTTACAC+GGG 0.620229 4_3:-62993998 Msa0654720:CDS
AAACTTTCTTGTGCATCCTG+AGG 0.621220 4_3:+62997712 None:intergenic
GATGCAAATCCAGATGCTGG+TGG 0.621381 4_3:-62992745 Msa0654720:CDS
TCCACTTTCGAAGCAACGAG+TGG 0.622786 4_3:-62994231 Msa0654720:CDS
CAGAACTTACAGTTGTGACA+AGG 0.625508 4_3:-62998810 Msa0654720:CDS
ATAATGACCACAAATTTGAG+TGG 0.625955 4_3:-62991596 Msa0654720:CDS
GGATGCAGAGCAATCTGCTG+CGG 0.627574 4_3:-62998770 Msa0654720:CDS
AAAACCAGCCCTTACACCGA+AGG 0.628957 4_3:-62998968 Msa0654720:CDS
GCTTCTAGGGAAGACTCCCG+GGG 0.629224 4_3:-62995378 Msa0654720:CDS
AAACTTGCATGACTGTAAGA+GGG 0.629499 4_3:+62991623 None:intergenic
GGGCATCTGACTTGGCTGCA+CGG 0.629721 4_3:-62991551 Msa0654720:CDS
TCTCTCAAAATGAATGTCCA+GGG 0.631429 4_3:-62998885 Msa0654720:CDS
GCTTCCTATAACAATCCTCA+GGG 0.632807 4_3:+62995015 None:intergenic
AGGACGAAGAGCGATCATTG+TGG 0.633070 4_3:-62996696 Msa0654720:CDS
CTTTGGACATCCATTTACAG+AGG 0.634735 4_3:+62995112 None:intergenic
GATACTGAATAACTAATACA+AGG 0.635441 4_3:+62994678 None:intergenic
CAGCCCTTACTATATATGGA+AGG 0.636193 4_3:+62996577 None:intergenic
GGATGCTAGGAAATAAGGGA+AGG 0.640077 4_3:-62991264 Msa0654720:three_prime_UTR
ATGCAAATCCAGATGCTGGT+GGG 0.642189 4_3:-62992744 Msa0654720:CDS
AACATACAAAGAATATCCCT+AGG 0.642294 4_3:+62995269 None:intergenic
AGATCAAGCTTGTCTCTTTG+GGG 0.645589 4_3:-62991769 Msa0654720:CDS
CAAAGTTGCAGAACCTCCAG+AGG 0.647199 4_3:-62994282 Msa0654720:CDS
AACGGCTCTATGAGACTGCA+GGG 0.648196 4_3:-62994911 Msa0654720:CDS
AGTGTGCAACGGTAAAGAGA+TGG 0.648687 4_3:+62998841 None:intergenic
GTGTAAATGTATTAATCCTG+AGG 0.650161 4_3:-62996622 Msa0654720:CDS
TGAAATTGCTAGGATATATG+TGG 0.651856 4_3:-62991208 Msa0654720:three_prime_UTR
CAGAGAACAGTTCAACCAGT+GGG 0.653322 4_3:-62991571 Msa0654720:CDS
ATATCTGATCATCCGCTCAG+TGG 0.657249 4_3:-62996738 Msa0654720:CDS
TGACTTATAATGGAAAAGAG+AGG 0.658235 4_3:+62995221 None:intergenic
GGCAACAAAAGAACGTCCTG+TGG 0.659882 4_3:-62999001 Msa0654720:CDS
TACCACAAGAGTTAACTGGA+GGG 0.660610 4_3:-62995300 Msa0654720:CDS
TAAATGTATTAATCCTGAGG+TGG 0.668210 4_3:-62996619 Msa0654720:CDS
TTACCACAAGAGTTAACTGG+AGG 0.668917 4_3:-62995301 Msa0654720:CDS
GATGTGATTGAATGTGCCAA+CGG 0.669639 4_3:-62995137 Msa0654720:CDS
TGCACGGCACAATTATAATG+TGG 0.686062 4_3:-62991535 Msa0654720:CDS
GGTTAAGCATTCCTCAGACG+AGG 0.687251 4_3:-62998864 Msa0654720:CDS
TAGCATGCATCGGATATACA+CGG 0.687540 4_3:-62996037 Msa0654720:CDS
AACTCACTAGAAGATAAGGA+CGG 0.690279 4_3:+62994456 None:intergenic
CCATGATAGAAGTTTCAATG+AGG 0.694184 4_3:+62994971 None:intergenic
AATTTACAAATTATCCAGAG+AGG 0.695325 4_3:-62995354 Msa0654720:CDS
TAAACTTCATGTCACCCTAG+GGG 0.704706 4_3:+62991143 None:intergenic
CCAGAGAACAGTTCAACCAG+TGG 0.708997 4_3:-62991572 Msa0654720:CDS
GCCCGAATGTGACCACTGAG+CGG 0.712193 4_3:+62996726 None:intergenic
CTTCCTATAACAATCCTCAG+GGG 0.761413 4_3:+62995016 None:intergenic
TGTGATTGAATGTGCCAACG+GGG 0.767832 4_3:-62995135 Msa0654720:CDS
CTTCTAGGGAAGACTCCCGG+GGG 0.792503 4_3:-62995377 Msa0654720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATCATTAGAAAATTTTAA+GGG + chr4_3:62992895-62992914 None:intergenic 10.0%
!!! AAAATCATTAGAAAATTTTA+AGG + chr4_3:62992896-62992915 None:intergenic 10.0%
!!! TTATGAAAATAAAGTATTTT+AGG - chr4_3:62993376-62993395 Msa0654720:intron 10.0%
!!! AAAATGAAGTATTATTTTTT+TGG - chr4_3:62994132-62994151 Msa0654720:intron 10.0%
!!! ATTTTTTTATTGAATGATAA+AGG - chr4_3:62997226-62997245 Msa0654720:intron 10.0%
!! ATTATATAAGCAATTTATAT+CGG + chr4_3:62999173-62999192 None:intergenic 10.0%
!!! TTTTTCATTTCTATGTTTTA+GGG - chr4_3:62991529-62991548 Msa0654720:CDS 15.0%
!! CATTAACTAATTAATTACAA+GGG + chr4_3:62991764-62991783 None:intergenic 15.0%
!! TCATTAACTAATTAATTACA+AGG + chr4_3:62991765-62991784 None:intergenic 15.0%
!!! ATGATTTTTGTTTTTGTTTT+TGG - chr4_3:62992908-62992927 Msa0654720:intron 15.0%
!!! TGATTTTTGTTTTTGTTTTT+GGG - chr4_3:62992909-62992928 Msa0654720:intron 15.0%
!!! ACTATATATTTTAAATACAG+AGG - chr4_3:62993006-62993025 Msa0654720:intron 15.0%
!! ATAAATTGTTACTGTATAAT+CGG + chr4_3:62993058-62993077 None:intergenic 15.0%
!! TTAAAAAATAATATGCAGAT+AGG + chr4_3:62993096-62993115 None:intergenic 15.0%
!!! AACTGAAGTATTTTTATTTT+GGG - chr4_3:62995158-62995177 Msa0654720:CDS 15.0%
!! TTAAATTATGACAAGTTAAA+AGG + chr4_3:62995232-62995251 None:intergenic 15.0%
!!! TTTTTTTAAGTAGAGTAATT+AGG - chr4_3:62997061-62997080 Msa0654720:intron 15.0%
!!! TTTTTTAAGTAGAGTAATTA+GGG - chr4_3:62997062-62997081 Msa0654720:intron 15.0%
!!! TTCTTTTAAATTCAATTCTT+GGG + chr4_3:62997596-62997615 None:intergenic 15.0%
!!! ATTCTTTTAAATTCAATTCT+TGG + chr4_3:62997597-62997616 None:intergenic 15.0%
!!! TAATAATATTTGTTAACGTT+TGG + chr4_3:62997719-62997738 None:intergenic 15.0%
!!! TTTCTATTTTCAAAAGTTAT+GGG + chr4_3:62997874-62997893 None:intergenic 15.0%
!!! TTTTCTATTTTCAAAAGTTA+TGG + chr4_3:62997875-62997894 None:intergenic 15.0%
!! TTTGAAAATAGAAAAGTAAT+TGG - chr4_3:62997880-62997899 Msa0654720:intron 15.0%
!! TTAAAGTAATGAATTTATGT+TGG - chr4_3:62998037-62998056 Msa0654720:intron 15.0%
!! ACAATAATAGGAATATAAAA+GGG + chr4_3:62998379-62998398 None:intergenic 15.0%
!! AACAATAATAGGAATATAAA+AGG + chr4_3:62998380-62998399 None:intergenic 15.0%
!! AATGAATGTGTATGAAATTA+GGG + chr4_3:62991276-62991295 None:intergenic 20.0%
!!! GTTTTTCATTTCTATGTTTT+AGG - chr4_3:62991528-62991547 Msa0654720:CDS 20.0%
!! TTACATGTTCATTTCTTTAT+TGG - chr4_3:62992341-62992360 Msa0654720:intron 20.0%
!! TTACATAACTTATAATGCTA+TGG - chr4_3:62992607-62992626 Msa0654720:intron 20.0%
!!! GATTTTTGTTTTTGTTTTTG+GGG - chr4_3:62992910-62992929 Msa0654720:intron 20.0%
!!! ATATTTTAAATACAGAGGAT+AGG - chr4_3:62993011-62993030 Msa0654720:intron 20.0%
!!! TACTTTTTCTGAAAAGATAT+AGG + chr4_3:62993317-62993336 None:intergenic 20.0%
!!! TTATTTTCATAACTGAAAGT+AGG + chr4_3:62993368-62993387 None:intergenic 20.0%
!! ACACTTCTTATTACATAAAA+GGG + chr4_3:62993413-62993432 None:intergenic 20.0%
!! AACACTTCTTATTACATAAA+AGG + chr4_3:62993414-62993433 None:intergenic 20.0%
!!! TTTATGTAATAAGAAGTGTT+TGG - chr4_3:62993414-62993433 Msa0654720:intron 20.0%
!! TAGAAATAGTTTATGATAGT+TGG - chr4_3:62993497-62993516 Msa0654720:intron 20.0%
!! AAACACAACAAAATGATTTA+GGG + chr4_3:62993636-62993655 None:intergenic 20.0%
!! TAAACACAACAAAATGATTT+AGG + chr4_3:62993637-62993656 None:intergenic 20.0%
!! GTTAGGAAAAAAAAATCATA+GGG + chr4_3:62993712-62993731 None:intergenic 20.0%
!! AGTTAGGAAAAAAAAATCAT+AGG + chr4_3:62993713-62993732 None:intergenic 20.0%
!! TTGAAATTGTAATAGTACAA+TGG - chr4_3:62995048-62995067 Msa0654720:CDS 20.0%
!! CAAAATAAAAATACTTCAGT+TGG + chr4_3:62995159-62995178 None:intergenic 20.0%
!!! CAACTGAAGTATTTTTATTT+TGG - chr4_3:62995157-62995176 Msa0654720:CDS 20.0%
!! GGAGAAATTATTTAATAGAT+AGG + chr4_3:62995257-62995276 None:intergenic 20.0%
!! ATCTATTAAATAATTTCTCC+AGG - chr4_3:62995257-62995276 Msa0654720:CDS 20.0%
!! AAAACTTTGATTATTTGACT+AGG - chr4_3:62995372-62995391 Msa0654720:CDS 20.0%
!! ACTCATTTAAAAGAATTCAA+TGG + chr4_3:62995490-62995509 None:intergenic 20.0%
!! TATTAGTTATTCAGTATCTT+TGG - chr4_3:62996316-62996335 Msa0654720:CDS 20.0%
!!! TTTATATTCTTATTTTGCAG+AGG - chr4_3:62996653-62996672 Msa0654720:CDS 20.0%
!! ATATTCTATTATAAAAGGGA+GGG + chr4_3:62997401-62997420 None:intergenic 20.0%
!! AATATTCTATTATAAAAGGG+AGG + chr4_3:62997402-62997421 None:intergenic 20.0%
!! GGGAATATTCTATTATAAAA+GGG + chr4_3:62997405-62997424 None:intergenic 20.0%
!! AGGGAATATTCTATTATAAA+AGG + chr4_3:62997406-62997425 None:intergenic 20.0%
!! AATATGAAGTCAACAATAAT+AGG + chr4_3:62998391-62998410 None:intergenic 20.0%
!! GAACTAATATATCTTGATTT+AGG + chr4_3:62998453-62998472 None:intergenic 20.0%
!! TTCCATATTTGCAATTTAAA+CGG + chr4_3:62998686-62998705 None:intergenic 20.0%
!!! GTTTCATGAAAATTTTAGTA+AGG - chr4_3:62998708-62998727 Msa0654720:intron 20.0%
!! TTTAAACGTGTTAAAATGAA+TGG + chr4_3:62998788-62998807 None:intergenic 20.0%
!! TTAACACGTTTAAATACTTT+AGG - chr4_3:62998794-62998813 Msa0654720:CDS 20.0%
!! AATTGCTTATATAATAATGC+AGG - chr4_3:62999178-62999197 Msa0654720:intron 20.0%
!! ACTACATTGTATTCAAAATT+TGG + chr4_3:62999293-62999312 None:intergenic 20.0%
!! ATAGCCATTATAATGTAATA+TGG - chr4_3:62999591-62999610 Msa0654720:intron 20.0%
!! TAGCCATTATAATGTAATAT+GGG - chr4_3:62999592-62999611 Msa0654720:intron 20.0%
!! ATTCCCATATTACATTATAA+TGG + chr4_3:62999598-62999617 None:intergenic 20.0%
!! ATTATAATGTAATATGGGAA+TGG - chr4_3:62999597-62999616 Msa0654720:intron 20.0%
!! TAGAATGAAATGAAGTGTTA+AGG + chr4_3:62991223-62991242 None:intergenic 25.0%
! GAATGAATGTGTATGAAATT+AGG + chr4_3:62991277-62991296 None:intergenic 25.0%
! AGATATTGTTGCAAAATTTC+TGG - chr4_3:62991587-62991606 Msa0654720:CDS 25.0%
!!! TTGGCTGATATATTGTTTTA+TGG - chr4_3:62991922-62991941 Msa0654720:intron 25.0%
!! AAGCATTTTTACCAAACTTT+TGG + chr4_3:62992057-62992076 None:intergenic 25.0%
! AAGGACATTTAAGAAAAAGA+AGG - chr4_3:62992198-62992217 Msa0654720:intron 25.0%
!!! TCAATAATTTGCTTACTGAT+TGG + chr4_3:62992275-62992294 None:intergenic 25.0%
! GAAATGAACATGTAAGTAAA+AGG + chr4_3:62992336-62992355 None:intergenic 25.0%
! TATTTATAGTTACCAAGAAG+TGG - chr4_3:62992375-62992394 Msa0654720:intron 25.0%
! GAACTGATAAAATACTTACT+CGG - chr4_3:62992405-62992424 Msa0654720:intron 25.0%
! TTAACATATAAGTGTGTGTT+TGG + chr4_3:62992539-62992558 None:intergenic 25.0%
! ATATTTGTCAATCGTTTGTT+GGG + chr4_3:62992823-62992842 None:intergenic 25.0%
! AATATTTGTCAATCGTTTGT+TGG + chr4_3:62992824-62992843 None:intergenic 25.0%
! ATTGACAAATATTGATCAGA+TGG - chr4_3:62992831-62992850 Msa0654720:intron 25.0%
! TTGACAAATATTGATCAGAT+GGG - chr4_3:62992832-62992851 Msa0654720:intron 25.0%
!!! TTAGAGGCTTTTTTTAATGT+AGG - chr4_3:62992948-62992967 Msa0654720:intron 25.0%
!!! GCAAATAATTCTTTTAGAAC+TGG - chr4_3:62993956-62993975 Msa0654720:intron 25.0%
! GTCATATCTTACTAAAATAC+AGG + chr4_3:62994070-62994089 None:intergenic 25.0%
! TCAGATATAAGAAACTGTAT+AGG + chr4_3:62994239-62994258 None:intergenic 25.0%
! TCTATAATATCTTGTGGATA+TGG + chr4_3:62994500-62994519 None:intergenic 25.0%
! AGATATTATAGAGTCGTTAA+TGG - chr4_3:62994508-62994527 Msa0654720:CDS 25.0%
! ATATCATTGCAAATGAACTT+GGG - chr4_3:62994645-62994664 Msa0654720:CDS 25.0%
! TAACTTATTCTTGATCTTTG+TGG - chr4_3:62994747-62994766 Msa0654720:CDS 25.0%
!! AAAGAAACCATTCATTTTGA+AGG - chr4_3:62994870-62994889 Msa0654720:CDS 25.0%
! TCAACCTTATATTACATTCT+TGG - chr4_3:62995071-62995090 Msa0654720:CDS 25.0%
! TTAGCCAAGAATGTAATATA+AGG + chr4_3:62995078-62995097 None:intergenic 25.0%
!! AAACTTAATACTTGGTGAAA+AGG - chr4_3:62995096-62995115 Msa0654720:CDS 25.0%
!!! GCATTTTTGCTTTATTATTG+CGG - chr4_3:62995133-62995152 Msa0654720:CDS 25.0%
!!! AATTTCTCCAGGTTTTAATT+AGG - chr4_3:62995268-62995287 Msa0654720:CDS 25.0%
!!! TGAGTATTTGTCTTTTTTGT+TGG - chr4_3:62995505-62995524 Msa0654720:intron 25.0%
! AATTTACAAATTATCCAGAG+AGG - chr4_3:62995635-62995654 Msa0654720:intron 25.0%
!! ATCATCAAAGTCATGTTTTA+AGG - chr4_3:62995812-62995831 Msa0654720:intron 25.0%
! TTACAAGACATGTTAGTAAA+TGG - chr4_3:62996227-62996246 Msa0654720:intron 25.0%
! GATACTGAATAACTAATACA+AGG + chr4_3:62996314-62996333 None:intergenic 25.0%
! TAAATTGCAAATTGTGTTGA+TGG - chr4_3:62996629-62996648 Msa0654720:CDS 25.0%
!!! TACAATGCAAATTTTGAGAT+AGG + chr4_3:62997040-62997059 None:intergenic 25.0%
!!! AAAAAGTGTCTTCTATAGTT+TGG - chr4_3:62997107-62997126 Msa0654720:intron 25.0%
!! AGTTTGGAATATATAATACC+AGG - chr4_3:62997123-62997142 Msa0654720:intron 25.0%
!! GTTTGGAATATATAATACCA+GGG - chr4_3:62997124-62997143 Msa0654720:intron 25.0%
! ATAGAAAAGAAAGGATAAAC+CGG - chr4_3:62997279-62997298 Msa0654720:intron 25.0%
! TATTCTATTATAAAAGGGAG+GGG + chr4_3:62997400-62997419 None:intergenic 25.0%
! AAAGACTACATAATACAAGA+TGG + chr4_3:62997555-62997574 None:intergenic 25.0%
!! TAATGAAAGAACACTTTTAG+TGG - chr4_3:62997617-62997636 Msa0654720:intron 25.0%
! AGTTAGGATTATCATGTATA+TGG + chr4_3:62997765-62997784 None:intergenic 25.0%
! CTATCTGCATCTATTAAATA+AGG + chr4_3:62997946-62997965 None:intergenic 25.0%
!!! CAATTACAAATTTTGATTCC+AGG - chr4_3:62998308-62998327 Msa0654720:intron 25.0%
!!! TGTTGACTTCATTTTTGATA+TGG - chr4_3:62998422-62998441 Msa0654720:intron 25.0%
! ATAAAATCATCTATGATGCA+TGG - chr4_3:62998485-62998504 Msa0654720:intron 25.0%
! TTCCGTTTAAATTGCAAATA+TGG - chr4_3:62998681-62998700 Msa0654720:intron 25.0%
! AATACTTTAGGCTTAAAAAC+CGG - chr4_3:62998806-62998825 Msa0654720:CDS 25.0%
!! ACTTCTACATTTTTATCACT+TGG - chr4_3:62998991-62999010 Msa0654720:CDS 25.0%
! GTAGAAACAATAAGAATCTT+TGG + chr4_3:62999269-62999288 None:intergenic 25.0%
! AATTATAATGTGGAGTTTAG+TGG - chr4_3:62999464-62999483 Msa0654720:intron 25.0%
! ATTATAATGTGGAGTTTAGT+GGG - chr4_3:62999465-62999484 Msa0654720:intron 25.0%
!!! AGTATTGATAGGTTTAGTTA+AGG - chr4_3:62999749-62999768 Msa0654720:five_prime_UTR 25.0%
!! GTATTGATAGGTTTAGTTAA+GGG - chr4_3:62999750-62999769 Msa0654720:five_prime_UTR 25.0%
! GTTTAAAAGAATACACATGA+TGG - chr4_3:62999864-62999883 Msa0654720:five_prime_UTR 25.0%
!!! ATACACATGATGGTTTTTTA+TGG - chr4_3:62999874-62999893 Msa0654720:five_prime_UTR 25.0%
TTCAACAACAACAAACCTTT+AGG - chr4_3:62991297-62991316 Msa0654720:three_prime_UTR 30.0%
! CAGAAGCATAATGCAAAAAT+AGG + chr4_3:62991476-62991495 None:intergenic 30.0%
TATCTTCAACACACACAAAA+AGG + chr4_3:62991572-62991591 None:intergenic 30.0%
AGGGTGACTTATAAAAATCT+AGG + chr4_3:62991745-62991764 None:intergenic 30.0%
!! TTTTGGTGTATTATAGCCTT+CGG + chr4_3:62992040-62992059 None:intergenic 30.0%
GCTATAATACACCAAAAGTT+TGG - chr4_3:62992043-62992062 Msa0654720:intron 30.0%
TCAAACTCAACTTTCTACTT+AGG + chr4_3:62992491-62992510 None:intergenic 30.0%
! TGAGTTTGATTTCTTGCATT+TGG - chr4_3:62992502-62992521 Msa0654720:intron 30.0%
!! GTCAATGTCTTGTATTTTAG+AGG - chr4_3:62992932-62992951 Msa0654720:intron 30.0%
! TATAGTTTGCAACAATGAGT+CGG + chr4_3:62992992-62993011 None:intergenic 30.0%
!! AAGTGTTTATCTGTTTTGAG+AGG - chr4_3:62993168-62993187 Msa0654720:intron 30.0%
! AAGCACTTATCTTGTGTTTT+TGG - chr4_3:62993525-62993544 Msa0654720:intron 30.0%
!! TAACCTGTTTCTACAATAGA+AGG + chr4_3:62993566-62993585 None:intergenic 30.0%
!! ATCATTTTGTTGTGTTTAGC+CGG - chr4_3:62993639-62993658 Msa0654720:intron 30.0%
GGAAAAAAAAATCATAGGGA+TGG + chr4_3:62993708-62993727 None:intergenic 30.0%
! GTTTGTTGCAATGAACATTA+AGG - chr4_3:62993874-62993893 Msa0654720:intron 30.0%
CTGACAAACACATGTAATAT+TGG + chr4_3:62994171-62994190 None:intergenic 30.0%
TGATGAATGGCAAAGAAAAA+TGG + chr4_3:62994216-62994235 None:intergenic 30.0%
GTGTAAATGTATTAATCCTG+AGG - chr4_3:62994367-62994386 Msa0654720:intron 30.0%
TAAATGTATTAATCCTGAGG+TGG - chr4_3:62994370-62994389 Msa0654720:intron 30.0%
ATATATGGAAGGACCAAAAA+CGG + chr4_3:62994404-62994423 None:intergenic 30.0%
TTACATCTGAACAACATATC+TGG - chr4_3:62994459-62994478 Msa0654720:intron 30.0%
AACGACTCTATAATATCTTG+TGG + chr4_3:62994506-62994525 None:intergenic 30.0%
GTTCATTTGCAATGATATCA+AGG + chr4_3:62994643-62994662 None:intergenic 30.0%
GATATCATTGCAAATGAACT+TGG - chr4_3:62994644-62994663 Msa0654720:CDS 30.0%
ATACCTTGAAATCAGAACAT+TGG + chr4_3:62994684-62994703 None:intergenic 30.0%
TAGAGATCCTTCAAAATGAA+TGG + chr4_3:62994880-62994899 None:intergenic 30.0%
TAACTGTTCGGTTATATTAC+AGG - chr4_3:62995003-62995022 Msa0654720:CDS 30.0%
TCTTGGCTAAACTTAATACT+TGG - chr4_3:62995088-62995107 Msa0654720:CDS 30.0%
! AAAACAGCAAAGGTTTTTAC+AGG + chr4_3:62995191-62995210 None:intergenic 30.0%
TCAGTTATCAAAAACAGCAA+AGG + chr4_3:62995201-62995220 None:intergenic 30.0%
CTTAGGCTAAGAAAGATAAA+GGG - chr4_3:62995304-62995323 Msa0654720:CDS 30.0%
ACTTTGATTATTTGACTAGG+AGG - chr4_3:62995375-62995394 Msa0654720:CDS 30.0%
!!! TCGTTTGCATGATGTTTTTT+TGG - chr4_3:62995425-62995444 Msa0654720:intron 30.0%
GAATTCAATGGATGCAAAAA+TGG + chr4_3:62995478-62995497 None:intergenic 30.0%
AACATACAAAGAATATCCCT+AGG + chr4_3:62995723-62995742 None:intergenic 30.0%
! TGACTTATAATGGAAAAGAG+AGG + chr4_3:62995771-62995790 None:intergenic 30.0%
TTTGAGAGGATGACTTATAA+TGG + chr4_3:62995781-62995800 None:intergenic 30.0%
! GTGAAATAAAGTTGCTTTCT+CGG - chr4_3:62995925-62995944 Msa0654720:intron 30.0%
!! AAAGGTTTTTGGAAAAAACG+TGG + chr4_3:62996115-62996134 None:intergenic 30.0%
!! AATCTCTCTGAAAAGGTTTT+TGG + chr4_3:62996126-62996145 None:intergenic 30.0%
! CAATTACAATCTCTCTGAAA+AGG + chr4_3:62996133-62996152 None:intergenic 30.0%
! CTTTTCAGAGAGATTGTAAT+TGG - chr4_3:62996131-62996150 Msa0654720:CDS 30.0%
TGTAATGAATTTGCACACAT+TGG + chr4_3:62996212-62996231 None:intergenic 30.0%
TTATTCAGTATCTTTGGTTG+TGG - chr4_3:62996322-62996341 Msa0654720:CDS 30.0%
! AATGAGTTTGAGTTTGAGAT+TGG - chr4_3:62996380-62996399 Msa0654720:CDS 30.0%
! ATGAGTTTGAGTTTGAGATT+GGG - chr4_3:62996381-62996400 Msa0654720:CDS 30.0%
AAGTAACTCACTAGAAGATA+AGG + chr4_3:62996540-62996559 None:intergenic 30.0%
! TATTTTCTTTTGTTAGTCCG+AGG - chr4_3:62996846-62996865 Msa0654720:intron 30.0%
!! TGGTGTTGATATTTCACAAA+AGG - chr4_3:62996979-62996998 Msa0654720:intron 30.0%
!! GGTGTTGATATTTCACAAAA+GGG - chr4_3:62996980-62996999 Msa0654720:intron 30.0%
AAGTAGAGTAATTAGGGTTT+AGG - chr4_3:62997068-62997087 Msa0654720:intron 30.0%
GTCATTACTTTGGCATATTT+AGG + chr4_3:62997173-62997192 None:intergenic 30.0%
TCAGACAAAAGTCATTACTT+TGG + chr4_3:62997183-62997202 None:intergenic 30.0%
GTTTCGTTATCTTGAATTCA+CGG + chr4_3:62997206-62997225 None:intergenic 30.0%
! AATGATAAAGGTTAGCTCAA+AGG - chr4_3:62997238-62997257 Msa0654720:intron 30.0%
GGTGGAATAATAGAAAAGAA+AGG - chr4_3:62997270-62997289 Msa0654720:intron 30.0%
GAGATTGTTAGAAGTTAGTT+AGG + chr4_3:62997357-62997376 None:intergenic 30.0%
!!! ATATGGTTTTGTGTAGAGAA+GGG + chr4_3:62997748-62997767 None:intergenic 30.0%
!!! TATATGGTTTTGTGTAGAGA+AGG + chr4_3:62997749-62997768 None:intergenic 30.0%
! AGGATAAAGATGAGTTTGTT+AGG + chr4_3:62997832-62997851 None:intergenic 30.0%
!! GTCTTGGTCTTATACTTTAT+AGG - chr4_3:62998097-62998116 Msa0654720:intron 30.0%
AAGTCAGTTATTCTTTACGA+AGG - chr4_3:62998283-62998302 Msa0654720:intron 30.0%
TGATATTGGTACTTGTTTAG+AGG - chr4_3:62998342-62998361 Msa0654720:intron 30.0%
CATATGATAATTAAGTTCCC+TGG - chr4_3:62998546-62998565 Msa0654720:intron 30.0%
AAAATGAATGGTAGCAACAT+GGG + chr4_3:62998776-62998795 None:intergenic 30.0%
TAAAATGAATGGTAGCAACA+TGG + chr4_3:62998777-62998796 None:intergenic 30.0%
TATCCTAGTTTAAACGCTTT+AGG - chr4_3:62998912-62998931 Msa0654720:CDS 30.0%
TATGAGCAAAATTGAAACAG+AGG + chr4_3:62999085-62999104 None:intergenic 30.0%
CTACACAAATGAAGATTTAC+AGG + chr4_3:62999121-62999140 None:intergenic 30.0%
TGTAGAAACTCTGATTATCT+TGG - chr4_3:62999136-62999155 Msa0654720:intron 30.0%
ATAATGACCACAAATTTGAG+TGG - chr4_3:62999393-62999412 Msa0654720:intron 30.0%
TTATAATGTGGAGTTTAGTG+GGG - chr4_3:62999466-62999485 Msa0654720:intron 30.0%
!! CATTCTGTTAGCTTCTTTTA+AGG + chr4_3:62999652-62999671 None:intergenic 30.0%
!! CTTATATAGTTCTGATTGCT+TGG - chr4_3:62999675-62999694 Msa0654720:intron 30.0%
AGAAGACAACCAAAATAGAA+TGG - chr4_3:62999704-62999723 Msa0654720:five_prime_UTR 30.0%
TGAAATTGCTAGGATATATG+TGG - chr4_3:62999781-62999800 Msa0654720:five_prime_UTR 30.0%
AAGCTGGATGTTTAAATGTT+AGG - chr4_3:62999818-62999837 Msa0654720:five_prime_UTR 30.0%
AGCTGGATGTTTAAATGTTA+GGG - chr4_3:62999819-62999838 Msa0654720:five_prime_UTR 30.0%
! GAAGTGTTAAGGAAAAAGAG+TGG + chr4_3:62991212-62991231 None:intergenic 35.0%
AAAAGGGAAAAAGCGAGAAT+CGG + chr4_3:62991363-62991382 None:intergenic 35.0%
! AAATTTCTGGAAAATGCGCA+TGG - chr4_3:62991600-62991619 Msa0654720:CDS 35.0%
! AATTTCTGGAAAATGCGCAT+GGG - chr4_3:62991601-62991620 Msa0654720:CDS 35.0%
TGTAACCACATGTGTCTATT+GGG + chr4_3:62991803-62991822 None:intergenic 35.0%
ATGTAACCACATGTGTCTAT+TGG + chr4_3:62991804-62991823 None:intergenic 35.0%
ACAAACACATACTCTGAACA+CGG + chr4_3:62991884-62991903 None:intergenic 35.0%
! TGTCGATGCTTCATAGTTTT+TGG - chr4_3:62991903-62991922 Msa0654720:intron 35.0%
!! GTTGATTTTCAAGAATACGC+TGG - chr4_3:62991944-62991963 Msa0654720:intron 35.0%
! AAATGTTCTGAGCTTTCTCA+TGG - chr4_3:62991967-62991986 Msa0654720:intron 35.0%
! TATTATAGCCTTCGGTGTAA+GGG + chr4_3:62992032-62992051 None:intergenic 35.0%
!! TGGTAAAAATGCTTGCTATG+TGG - chr4_3:62992063-62992082 Msa0654720:intron 35.0%
TCTCTCAAAATGAATGTCCA+GGG - chr4_3:62992104-62992123 Msa0654720:intron 35.0%
AGTTCAATTCTACCACTTCT+TGG + chr4_3:62992390-62992409 None:intergenic 35.0%
! TCAGATGGGCTCAATTAAAA+TGG - chr4_3:62992846-62992865 Msa0654720:intron 35.0%
AAATACAGAGGATAGGCAAA+TGG - chr4_3:62993018-62993037 Msa0654720:intron 35.0%
TTAAATTGCCACTGCTATGT+AGG - chr4_3:62993112-62993131 Msa0654720:intron 35.0%
GCAGATATGATACAACACAA+AGG + chr4_3:62993142-62993161 None:intergenic 35.0%
ACACCTTCTATTGTAGAAAC+AGG - chr4_3:62993560-62993579 Msa0654720:intron 35.0%
TTAGAAACCTGAAGGATCAT+TGG + chr4_3:62993670-62993689 None:intergenic 35.0%
AAACGGAATTAGAAACCTGA+AGG + chr4_3:62993678-62993697 None:intergenic 35.0%
ATCAAACAATCGGGAATGAA+GGG + chr4_3:62993931-62993950 None:intergenic 35.0%
TTTGCTTGCCATCAAACAAT+CGG + chr4_3:62993941-62993960 None:intergenic 35.0%
GAAACTGTATAGGTGATGAA+TGG + chr4_3:62994229-62994248 None:intergenic 35.0%
TGGTCCTTCCATATATAGTA+AGG - chr4_3:62994408-62994427 Msa0654720:intron 35.0%
GGTCCTTCCATATATAGTAA+GGG - chr4_3:62994409-62994428 Msa0654720:intron 35.0%
TATAGAGTCGTTAATGGAAG+AGG - chr4_3:62994514-62994533 Msa0654720:CDS 35.0%
ATAGAGTCGTTAATGGAAGA+GGG - chr4_3:62994515-62994534 Msa0654720:CDS 35.0%
TGATTCACAAGAATGCATTC+AGG - chr4_3:62994538-62994557 Msa0654720:CDS 35.0%
! ACATGTTTTTCCATTGAACC+AGG + chr4_3:62994581-62994600 None:intergenic 35.0%
! AATGAACTTGGGTTAGAAGA+TGG - chr4_3:62994656-62994675 Msa0654720:CDS 35.0%
! ATGAACTTGGGTTAGAAGAT+GGG - chr4_3:62994657-62994676 Msa0654720:CDS 35.0%
AGCTTTGCCTATATTCCTAT+TGG + chr4_3:62994775-62994794 None:intergenic 35.0%
GACAATCATATCTACTGGAT+CGG - chr4_3:62994826-62994845 Msa0654720:CDS 35.0%
TTGAAGGATCTCTAAATGCA+AGG - chr4_3:62994886-62994905 Msa0654720:CDS 35.0%
TGAAGGATCTCTAAATGCAA+GGG - chr4_3:62994887-62994906 Msa0654720:CDS 35.0%
! ATCTAGAGATCTTTTCTACG+AGG - chr4_3:62994977-62994996 Msa0654720:CDS 35.0%
GCTTAGGCTAAGAAAGATAA+AGG - chr4_3:62995303-62995322 Msa0654720:CDS 35.0%
ATTGTACAGCAACATCAGAA+AGG + chr4_3:62995331-62995350 None:intergenic 35.0%
TGCAAACGAGAAACAAAAGT+TGG + chr4_3:62995414-62995433 None:intergenic 35.0%
CAATGGATGCAAAAATGGAT+TGG + chr4_3:62995473-62995492 None:intergenic 35.0%
TGCATCATTTAGTGATTGCT+AGG - chr4_3:62995573-62995592 Msa0654720:intron 35.0%
! GATTGCTAGGTTTTCTATAC+AGG - chr4_3:62995586-62995605 Msa0654720:intron 35.0%
TTTCTATACAGGATGCTTCT+AGG - chr4_3:62995597-62995616 Msa0654720:intron 35.0%
TTCTATACAGGATGCTTCTA+GGG - chr4_3:62995598-62995617 Msa0654720:intron 35.0%
! GATAATTTGTAAATTCCCCC+GGG + chr4_3:62995630-62995649 None:intergenic 35.0%
! GGATAATTTGTAAATTCCCC+CGG + chr4_3:62995631-62995650 None:intergenic 35.0%
ACTCTTGTGGTAAATCTTGA+AGG + chr4_3:62995681-62995700 None:intergenic 35.0%
GATTTACCACAAGAGTTAAC+TGG - chr4_3:62995685-62995704 Msa0654720:intron 35.0%
ACAAAGAATATCCCTAGGAA+GGG + chr4_3:62995718-62995737 None:intergenic 35.0%
TACAAAGAATATCCCTAGGA+AGG + chr4_3:62995719-62995738 None:intergenic 35.0%
!! GATTCAGTTGGTATTTTGAG+AGG + chr4_3:62995795-62995814 None:intergenic 35.0%
! CATGACTTTGATGATTCAGT+TGG + chr4_3:62995807-62995826 None:intergenic 35.0%
!!! AATACTTTTTTGTTCCCCTG+AGG - chr4_3:62995959-62995978 Msa0654720:intron 35.0%
CCATGATAGAAGTTTCAATG+AGG + chr4_3:62996021-62996040 None:intergenic 35.0%
CCTCATTGAAACTTCTATCA+TGG - chr4_3:62996018-62996037 Msa0654720:CDS 35.0%
ATTGGTCAATCCATTCAGAA+TGG - chr4_3:62996149-62996168 Msa0654720:CDS 35.0%
ATAAAGATGGCCATTCTGAA+TGG + chr4_3:62996162-62996181 None:intergenic 35.0%
TACACTGCATTGCATAAAGA+TGG + chr4_3:62996175-62996194 None:intergenic 35.0%
GTTTGCAGCTTAAAGATTGA+AGG - chr4_3:62996251-62996270 Msa0654720:intron 35.0%
! TGAGTTTGAGTTTGAGATTG+GGG - chr4_3:62996382-62996401 Msa0654720:CDS 35.0%
TGCTGTGATTTCATTCATTG+AGG - chr4_3:62996409-62996428 Msa0654720:CDS 35.0%
TGTGATTTCATTCATTGAGG+AGG - chr4_3:62996412-62996431 Msa0654720:CDS 35.0%
TCGTGTTGAAATAAGCATAC+TGG + chr4_3:62996460-62996479 None:intergenic 35.0%
!! GATTTGATTTTTGCTTCAGC+TGG - chr4_3:62996494-62996513 Msa0654720:CDS 35.0%
AACTCACTAGAAGATAAGGA+CGG + chr4_3:62996536-62996555 None:intergenic 35.0%
AGAATCACATGCTACTACTT+TGG - chr4_3:62996803-62996822 Msa0654720:intron 35.0%
TTTCACAAAAGGGTCTTACA+CGG - chr4_3:62996990-62997009 Msa0654720:intron 35.0%
!!! TGGCACTTTCGTTGATTTTA+GGG + chr4_3:62997425-62997444 None:intergenic 35.0%
!!! TTGGCACTTTCGTTGATTTT+AGG + chr4_3:62997426-62997445 None:intergenic 35.0%
CATAGGAAATGAGAGTTAGT+TGG + chr4_3:62997445-62997464 None:intergenic 35.0%
TCTAAAGATCTTGATGGAGT+CGG + chr4_3:62997517-62997536 None:intergenic 35.0%
ACTCCATCAAGATCTTTAGA+AGG - chr4_3:62997517-62997536 Msa0654720:intron 35.0%
! ACACCTTCTAAAGATCTTGA+TGG + chr4_3:62997523-62997542 None:intergenic 35.0%
AAATTCAATTCTTGGGTTCC+TGG + chr4_3:62997589-62997608 None:intergenic 35.0%
!! TTAGGGAAGTATTAGGTAGT+GGG + chr4_3:62997790-62997809 None:intergenic 35.0%
!! AAGTGAGTTAGGGAAGTATT+AGG + chr4_3:62997797-62997816 None:intergenic 35.0%
ATGAGGTTAGAAGTGAGTTA+GGG + chr4_3:62997807-62997826 None:intergenic 35.0%
TATGAGGTTAGAAGTGAGTT+AGG + chr4_3:62997808-62997827 None:intergenic 35.0%
!! GATGAGTTTGTTAGGATATG+AGG + chr4_3:62997824-62997843 None:intergenic 35.0%
TTATGGGCAGCATTATTGTT+AGG + chr4_3:62997858-62997877 None:intergenic 35.0%
TTTGTGTGCATAAATTGTGC+AGG - chr4_3:62998204-62998223 Msa0654720:intron 35.0%
!!! AATTTTGATTCCAGGTTGCA+TGG - chr4_3:62998316-62998335 Msa0654720:intron 35.0%
!!! ATTTTGATTCCAGGTTGCAT+GGG - chr4_3:62998317-62998336 Msa0654720:intron 35.0%
!! TCTATGATGCATGGTTTGTT+TGG - chr4_3:62998494-62998513 Msa0654720:intron 35.0%
ATCACATTAGCTCACTTTAG+AGG - chr4_3:62998738-62998757 Msa0654720:intron 35.0%
AAATGAATGGTAGCAACATG+GGG + chr4_3:62998775-62998794 None:intergenic 35.0%
!! ATGTAGAAGTGCTTGTTTAC+AGG + chr4_3:62998861-62998880 None:intergenic 35.0%
! AAGCCTAAAGCGTTTAAACT+AGG + chr4_3:62998918-62998937 None:intergenic 35.0%
! AACGCTTTAGGCTTAAAAAC+TGG - chr4_3:62998924-62998943 Msa0654720:CDS 35.0%
TATTTCCAAGAACATGACAC+TGG + chr4_3:62999062-62999081 None:intergenic 35.0%
AATGCAGGTGATTGAACATA+TGG - chr4_3:62999193-62999212 Msa0654720:intron 35.0%
AAGATCAAGCTTGTCTCTTT+GGG - chr4_3:62999219-62999238 Msa0654720:intron 35.0%
ATTCTTCTTGTTCTTGGGTA+GGG + chr4_3:62999334-62999353 None:intergenic 35.0%
AATTCTTCTTGTTCTTGGGT+AGG + chr4_3:62999335-62999354 None:intergenic 35.0%
TACCCAAGAACAAGAAGAAT+TGG - chr4_3:62999334-62999353 Msa0654720:intron 35.0%
GTCCAATTCTTCTTGTTCTT+GGG + chr4_3:62999339-62999358 None:intergenic 35.0%
CAAGAACAAGAAGAATTGGA+CGG - chr4_3:62999338-62999357 Msa0654720:intron 35.0%
AAGAACAAGAAGAATTGGAC+GGG - chr4_3:62999339-62999358 Msa0654720:intron 35.0%
AAACTTGCATGACTGTAAGA+GGG + chr4_3:62999369-62999388 None:intergenic 35.0%
TTGCTGTGTTCAAAAGAGAA+TGG - chr4_3:62999531-62999550 Msa0654720:intron 35.0%
TATCTATATCAGTATGCGTC+TGG + chr4_3:62999574-62999593 None:intergenic 35.0%
ACCAAAATAGAATGGATGCT+AGG - chr4_3:62999712-62999731 Msa0654720:five_prime_UTR 35.0%
! TCCTAGCATCCATTCTATTT+TGG + chr4_3:62999716-62999735 None:intergenic 35.0%
AGAATGGATGCTAGGAAATA+AGG - chr4_3:62999720-62999739 Msa0654720:five_prime_UTR 35.0%
GAATGGATGCTAGGAAATAA+GGG - chr4_3:62999721-62999740 Msa0654720:five_prime_UTR 35.0%
!! TAAGGGAAGGAAGTATTGAT+AGG - chr4_3:62999738-62999757 Msa0654720:five_prime_UTR 35.0%
TTAAACTTCATGTCACCCTA+GGG + chr4_3:62999850-62999869 None:intergenic 35.0%
TTTAAACTTCATGTCACCCT+AGG + chr4_3:62999851-62999870 None:intergenic 35.0%
TAGCAGCAATGATTCCGTTA+CGG - chr4_3:62991100-62991119 Msa0654720:three_prime_UTR 40.0%
AATGATTCCGTTACGGAACA+GGG - chr4_3:62991107-62991126 Msa0654720:three_prime_UTR 40.0%
AAAGAGTGGAAGACGAAAGA+GGG + chr4_3:62991198-62991217 None:intergenic 40.0%
AAAAGAGTGGAAGACGAAAG+AGG + chr4_3:62991199-62991218 None:intergenic 40.0%
AAATTGAAAGCGAGTGTGAG+TGG + chr4_3:62991386-62991405 None:intergenic 40.0%
TAAAGCCCAATAGACACATG+TGG - chr4_3:62991795-62991814 Msa0654720:intron 40.0%
! GTATTATAGCCTTCGGTGTA+AGG + chr4_3:62992033-62992052 None:intergenic 40.0%
!! AAATGCTTGCTATGTGGTAG+AGG - chr4_3:62992069-62992088 Msa0654720:intron 40.0%
GTCTCTCAAAATGAATGTCC+AGG - chr4_3:62992103-62992122 Msa0654720:intron 40.0%
CTTGTCACAACTGTAAGTTC+TGG + chr4_3:62992181-62992200 None:intergenic 40.0%
CAGAACTTACAGTTGTGACA+AGG - chr4_3:62992179-62992198 Msa0654720:intron 40.0%
GCTATTATCATCTTCACAGC+AGG + chr4_3:62992469-62992488 None:intergenic 40.0%
!! TCAATTTCAGTGGGCTAGTT+TGG - chr4_3:62992743-62992762 Msa0654720:CDS 40.0%
GTTACTGTATAATCGGCACT+AGG + chr4_3:62993051-62993070 None:intergenic 40.0%
CTGTAATGATACCAATCTGC+AGG + chr4_3:62993240-62993259 None:intergenic 40.0%
AAACTTTCTTGTGCATCCTG+AGG + chr4_3:62993280-62993299 None:intergenic 40.0%
TGAAGGATCATTGGATCATC+CGG + chr4_3:62993661-62993680 None:intergenic 40.0%
GTTTCTAATTCCGTTTCACC+TGG - chr4_3:62993682-62993701 Msa0654720:intron 40.0%
AAAAAATCATAGGGATGGCC+AGG + chr4_3:62993703-62993722 None:intergenic 40.0%
TACAGAGCAATCTAGCAGTT+AGG + chr4_3:62993729-62993748 None:intergenic 40.0%
GAGCTGGTAACTAAGACATT+TGG - chr4_3:62993767-62993786 Msa0654720:intron 40.0%
CATCAAACAATCGGGAATGA+AGG + chr4_3:62993932-62993951 None:intergenic 40.0%
CTTCATTCCCGATTGTTTGA+TGG - chr4_3:62993930-62993949 Msa0654720:intron 40.0%
TTGCTTGCCATCAAACAATC+GGG + chr4_3:62993940-62993959 None:intergenic 40.0%
GAACGTTGTTGGACATTCAT+AGG - chr4_3:62993989-62994008 Msa0654720:intron 40.0%
GACATACAATTACACCTTGC+TGG - chr4_3:62994087-62994106 Msa0654720:CDS 40.0%
TTTCAATGTGATGACCAGCA+AGG + chr4_3:62994104-62994123 None:intergenic 40.0%
CAGACAGCAATGACAGAAAT+AGG + chr4_3:62994326-62994345 None:intergenic 40.0%
CAGCCCTTACTATATATGGA+AGG + chr4_3:62994415-62994434 None:intergenic 40.0%
GTAGCAGCCCTTACTATATA+TGG + chr4_3:62994419-62994438 None:intergenic 40.0%
!! ACAAGAATGCATTCAGGTTG+AGG - chr4_3:62994544-62994563 Msa0654720:CDS 40.0%
! TGAACTTGGGTTAGAAGATG+GGG - chr4_3:62994658-62994677 Msa0654720:CDS 40.0%
TTGATCTTTGTGGCTCCAAT+AGG - chr4_3:62994757-62994776 Msa0654720:CDS 40.0%
TGTGGCTCCAATAGGAATAT+AGG - chr4_3:62994765-62994784 Msa0654720:CDS 40.0%
TGCTCGACAATCATATCTAC+TGG - chr4_3:62994821-62994840 Msa0654720:CDS 40.0%
! ACTGGATCGGTCTTTTGTAT+CGG - chr4_3:62994839-62994858 Msa0654720:CDS 40.0%
TTGTCTGGGCAAGATATAGT+TGG - chr4_3:62994918-62994937 Msa0654720:CDS 40.0%
GATGCAATCTTAGCATGCAT+CGG - chr4_3:62994942-62994961 Msa0654720:CDS 40.0%
TAGCATGCATCGGATATACA+CGG - chr4_3:62994952-62994971 Msa0654720:CDS 40.0%
TCTACGAGGATGTAACTGTT+CGG - chr4_3:62994991-62995010 Msa0654720:CDS 40.0%
! CAGCAAAGGTTTTTACAGGT+TGG + chr4_3:62995187-62995206 None:intergenic 40.0%
TGGGATGCCTAATTAAAACC+TGG + chr4_3:62995278-62995297 None:intergenic 40.0%
!!! GGTTTTAATTAGGCATCCCA+CGG - chr4_3:62995278-62995297 Msa0654720:CDS 40.0%
!! TGGATGCAAAAATGGATTGG+AGG + chr4_3:62995470-62995489 None:intergenic 40.0%
TTACCACAAGAGTTAACTGG+AGG - chr4_3:62995688-62995707 Msa0654720:intron 40.0%
TACCACAAGAGTTAACTGGA+GGG - chr4_3:62995689-62995708 Msa0654720:intron 40.0%
!!! AAGTCATGTTTTAAGGCTGC+AGG - chr4_3:62995819-62995838 Msa0654720:intron 40.0%
GATGTGATTGAATGTGCCAA+CGG - chr4_3:62995852-62995871 Msa0654720:intron 40.0%
ATGTGATTGAATGTGCCAAC+GGG - chr4_3:62995853-62995872 Msa0654720:intron 40.0%
CTTTGGACATCCATTTACAG+AGG + chr4_3:62995880-62995899 None:intergenic 40.0%
TGTCCAAAGCAATCAGATTC+AGG - chr4_3:62995891-62995910 Msa0654720:intron 40.0%
GTCCAAAGCAATCAGATTCA+GGG - chr4_3:62995892-62995911 Msa0654720:intron 40.0%
ATCCCTGAATCTGATTGCTT+TGG + chr4_3:62995897-62995916 None:intergenic 40.0%
CTTCCTATAACAATCCTCAG+GGG + chr4_3:62995976-62995995 None:intergenic 40.0%
GCTTCCTATAACAATCCTCA+GGG + chr4_3:62995977-62995996 None:intergenic 40.0%
TGCTTCCTATAACAATCCTC+AGG + chr4_3:62995978-62995997 None:intergenic 40.0%
! GTGTAACTGCTCCTTTTGAA+CGG - chr4_3:62996060-62996079 Msa0654720:CDS 40.0%
CAAGGTAAAGATCCATTGCA+TGG + chr4_3:62996296-62996315 None:intergenic 40.0%
TTCAGTATCTTTGGTTGTGG+AGG - chr4_3:62996325-62996344 Msa0654720:CDS 40.0%
TCAGTATCTTTGGTTGTGGA+GGG - chr4_3:62996326-62996345 Msa0654720:CDS 40.0%
! TTTGAGTTTGAGATTGGGGT+TGG - chr4_3:62996386-62996405 Msa0654720:CDS 40.0%
AGAAGATAAGGACGGCATTA+TGG + chr4_3:62996528-62996547 None:intergenic 40.0%
GCAAAACAACGTACATGTGT+GGG + chr4_3:62996588-62996607 None:intergenic 40.0%
TGCAAAACAACGTACATGTG+TGG + chr4_3:62996589-62996608 None:intergenic 40.0%
!! CATGTACGTTGTTTTGCAAG+TGG - chr4_3:62996591-62996610 Msa0654720:CDS 40.0%
TATTTCATACTCCACACAGC+AGG + chr4_3:62996679-62996698 None:intergenic 40.0%
AGAACCTCAAACTCACAACT+TGG + chr4_3:62996873-62996892 None:intergenic 40.0%
CCAAAATCAAGCTGCAATGA+AGG + chr4_3:62996896-62996915 None:intergenic 40.0%
! CCTTCATTGCAGCTTGATTT+TGG - chr4_3:62996893-62996912 Msa0654720:intron 40.0%
! TTGCAGCTTGATTTTGGATG+TGG - chr4_3:62996899-62996918 Msa0654720:intron 40.0%
! CTTGATTTTGGATGTGGATC+TGG - chr4_3:62996905-62996924 Msa0654720:intron 40.0%
GCTAAATTACACAACTTCGC+TGG - chr4_3:62996946-62996965 Msa0654720:intron 40.0%
TTCACAAAAGGGTCTTACAC+GGG - chr4_3:62996991-62997010 Msa0654720:intron 40.0%
TTAGCTCAAAGGCTCTACAA+TGG - chr4_3:62997249-62997268 Msa0654720:intron 40.0%
AGTTAGGAAAGTTCTCTCTC+TGG + chr4_3:62997341-62997360 None:intergenic 40.0%
! CTAGAAGATTGCAGAAGCAT+AGG + chr4_3:62997462-62997481 None:intergenic 40.0%
CTAAAGATCTTGATGGAGTC+GGG + chr4_3:62997516-62997535 None:intergenic 40.0%
AGTCTTTGTGCATAATTGCC+AGG - chr4_3:62997568-62997587 Msa0654720:intron 40.0%
! GTAGCTCTATTGTAGAGAGT+GGG + chr4_3:62997685-62997704 None:intergenic 40.0%
! AGTAGCTCTATTGTAGAGAG+TGG + chr4_3:62997686-62997705 None:intergenic 40.0%
!! TATTAGGTAGTGGGGTAGTT+AGG + chr4_3:62997781-62997800 None:intergenic 40.0%
!! TAGGGAAGTATTAGGTAGTG+GGG + chr4_3:62997789-62997808 None:intergenic 40.0%
!! GTTAGGGAAGTATTAGGTAG+TGG + chr4_3:62997791-62997810 None:intergenic 40.0%
GCAGCATTATTGTTAGGACA+AGG + chr4_3:62997852-62997871 None:intergenic 40.0%
! GTTGGATGAATAGTTGATGC+TGG - chr4_3:62998055-62998074 Msa0654720:intron 40.0%
! TTCCAACACAAAGCACTAGA+AGG + chr4_3:62998124-62998143 None:intergenic 40.0%
TTAGATGCAAATCCAGATGC+TGG - chr4_3:62998241-62998260 Msa0654720:intron 40.0%
AATATCAAACCCATGCAACC+TGG + chr4_3:62998329-62998348 None:intergenic 40.0%
AGGTTGCATGGGTTTGATAT+TGG - chr4_3:62998328-62998347 Msa0654720:intron 40.0%
ACCACATCAGCAGTATTATC+CGG + chr4_3:62998828-62998847 None:intergenic 40.0%
!! TGTAGAAGTGCTTGTTCACA+GGG + chr4_3:62998980-62998999 None:intergenic 40.0%
!! ATGTAGAAGTGCTTGTTCAC+AGG + chr4_3:62998981-62999000 None:intergenic 40.0%
ATACCTCTGCTTCAATTTGC+TGG - chr4_3:62999016-62999035 Msa0654720:exon 40.0%
ATTCCAGCAAATTGAAGCAG+AGG + chr4_3:62999022-62999041 None:intergenic 40.0%
GAAGATCAAGCTTGTCTCTT+TGG - chr4_3:62999218-62999237 Msa0654720:intron 40.0%
AGATCAAGCTTGTCTCTTTG+GGG - chr4_3:62999220-62999239 Msa0654720:intron 40.0%
TTCTTCTTGTTCTTGGGTAG+GGG + chr4_3:62999333-62999352 None:intergenic 40.0%
CGTCCAATTCTTCTTGTTCT+TGG + chr4_3:62999340-62999359 None:intergenic 40.0%
GAAACTTGCATGACTGTAAG+AGG + chr4_3:62999370-62999389 None:intergenic 40.0%
TGCACGGCACAATTATAATG+TGG - chr4_3:62999454-62999473 Msa0654720:intron 40.0%
! GGATAGAGTCTGAAATTGCT+AGG - chr4_3:62999771-62999790 Msa0654720:five_prime_UTR 40.0%
! GGTGAGATATTTTGTGAAGC+TGG - chr4_3:62999802-62999821 Msa0654720:five_prime_UTR 40.0%
TAAACTTCATGTCACCCTAG+GGG + chr4_3:62999849-62999868 None:intergenic 40.0%
CAATGATTCCGTTACGGAAC+AGG - chr4_3:62991106-62991125 Msa0654720:three_prime_UTR 45.0%
GAGCGAGAGAATGTACCTAA+AGG + chr4_3:62991315-62991334 None:intergenic 45.0%
AAGCGAGTGTGAGTGGAAAA+GGG + chr4_3:62991379-62991398 None:intergenic 45.0%
AAAGCGAGTGTGAGTGGAAA+AGG + chr4_3:62991380-62991399 None:intergenic 45.0%
!!! GGTGTAAGGGCTGGTTTTTT+CGG + chr4_3:62992019-62992038 None:intergenic 45.0%
TGTGGTAGAGGAAGTGAAAG+AGG - chr4_3:62992081-62992100 Msa0654720:intron 45.0%
AGTGTGCAACGGTAAAGAGA+TGG + chr4_3:62992151-62992170 None:intergenic 45.0%
ATCAAACCTGAGACCTTGAG+AGG + chr4_3:62992712-62992731 None:intergenic 45.0%
!! GTCTCAGGTTTGATTTTCCC+CGG - chr4_3:62992718-62992737 Msa0654720:CDS 45.0%
TAGCCCACTGAAATTGACAC+CGG + chr4_3:62992740-62992759 None:intergenic 45.0%
! ATCGTTTGTTGGGCTGAATG+AGG + chr4_3:62992813-62992832 None:intergenic 45.0%
AAGGAGTTCCTACATAGCAG+TGG + chr4_3:62993123-62993142 None:intergenic 45.0%
TGAATTGCTCTCCTGCAGAT+TGG - chr4_3:62993226-62993245 Msa0654720:intron 45.0%
AAGCGCTACTGTCACAAGAT+AGG + chr4_3:62993455-62993474 None:intergenic 45.0%
GGATGATCCAATGATCCTTC+AGG - chr4_3:62993660-62993679 Msa0654720:intron 45.0%
CTCTGTAAGTAGCCAGTTCT+TGG - chr4_3:62993742-62993761 Msa0654720:intron 45.0%
TTACCAGCTCAACCAAGAAC+TGG + chr4_3:62993757-62993776 None:intergenic 45.0%
AGTACACAGCAACATCAGTG+AGG + chr4_3:62993815-62993834 None:intergenic 45.0%
GTCTGATCTCTGAACGTTGT+TGG - chr4_3:62993978-62993997 Msa0654720:intron 45.0%
ATATCTGATCATCCGCTCAG+TGG - chr4_3:62994251-62994270 Msa0654720:CDS 45.0%
! GGTGGAGTCAAATCCGTTTT+TGG - chr4_3:62994388-62994407 Msa0654720:intron 45.0%
CATTGAACCAGGAATGCGTA+TGG + chr4_3:62994570-62994589 None:intergenic 45.0%
CATACGCATTCCTGGTTCAA+TGG - chr4_3:62994568-62994587 Msa0654720:CDS 45.0%
GGGCCAATGTTCTGATTTCA+AGG - chr4_3:62994678-62994697 Msa0654720:CDS 45.0%
! CTGGATCGGTCTTTTGTATC+GGG - chr4_3:62994840-62994859 Msa0654720:CDS 45.0%
! CGGTCTTTTGTATCGGGAAA+TGG - chr4_3:62994846-62994865 Msa0654720:CDS 45.0%
CAAGGGCAAGATACTTGTCT+GGG - chr4_3:62994904-62994923 Msa0654720:CDS 45.0%
TTCTTAGCCTAAGCAACCGT+GGG + chr4_3:62995297-62995316 None:intergenic 45.0%
TTTCTTAGCCTAAGCAACCG+TGG + chr4_3:62995298-62995317 None:intergenic 45.0%
ACCACAAGAGTTAACTGGAG+GGG - chr4_3:62995690-62995709 Msa0654720:intron 45.0%
TGGAAAAGAGAGGTTCAGAC+AGG + chr4_3:62995761-62995780 None:intergenic 45.0%
!!! ATGTTTTAAGGCTGCAGGCT+TGG - chr4_3:62995824-62995843 Msa0654720:intron 45.0%
!!! TGTTTTAAGGCTGCAGGCTT+GGG - chr4_3:62995825-62995844 Msa0654720:intron 45.0%
TGTGATTGAATGTGCCAACG+GGG - chr4_3:62995854-62995873 Msa0654720:intron 45.0%
! AAAGTTGCTTTCTCGGTGTG+CGG - chr4_3:62995932-62995951 Msa0654720:intron 45.0%
GTTCCCCTGAGGATTGTTAT+AGG - chr4_3:62995970-62995989 Msa0654720:intron 45.0%
GTCTCATAGAGCCGTTCAAA+AGG + chr4_3:62996074-62996093 None:intergenic 45.0%
AAGATTGAAGGTCCAGACTC+TGG - chr4_3:62996263-62996282 Msa0654720:intron 45.0%
GTTGTGATGCAGATGTCTGT+TGG - chr4_3:62996434-62996453 Msa0654720:CDS 45.0%
AGAACCTCCAGAGGAAAGAA+TGG - chr4_3:62996716-62996735 Msa0654720:CDS 45.0%
CAAACTCACAACTTGGACCT+CGG + chr4_3:62996866-62996885 None:intergenic 45.0%
AGGTCCAAGTTGTGAGTTTG+AGG - chr4_3:62996866-62996885 Msa0654720:intron 45.0%
ATGTGGATCTGGAAGCTTGT+TGG - chr4_3:62996916-62996935 Msa0654720:intron 45.0%
ACTTCGCTGGAGAAAATTGC+TGG - chr4_3:62996959-62996978 Msa0654720:intron 45.0%
!! TGGTAAGAGTGTTCACACTC+CGG + chr4_3:62997301-62997320 None:intergenic 45.0%
GGAAAGTTCTCTCTCTGGTT+AGG + chr4_3:62997336-62997355 None:intergenic 45.0%
!! TTCTAGAATGTGCCTTGCCT+AGG - chr4_3:62997476-62997495 Msa0654720:intron 45.0%
AATGATAGGACACCTAGGCA+AGG + chr4_3:62997491-62997510 None:intergenic 45.0%
TAAGAGAGAACTCTCCTCCA+AGG - chr4_3:62997655-62997674 Msa0654720:intron 45.0%
AAGAGAGAACTCTCCTCCAA+GGG - chr4_3:62997656-62997675 Msa0654720:intron 45.0%
!! GGTTTTGTGTAGAGAAGGGA+AGG + chr4_3:62997744-62997763 None:intergenic 45.0%
GACTTGAATTCTGCTCAGTG+TGG - chr4_3:62998005-62998024 Msa0654720:intron 45.0%
CCAAGACCTCCAAGATCAAA+AGG + chr4_3:62998084-62998103 None:intergenic 45.0%
! CCTTTTGATCTTGGAGGTCT+TGG - chr4_3:62998081-62998100 Msa0654720:intron 45.0%
GACCTTCTAGTGCTTTGTGT+TGG - chr4_3:62998119-62998138 Msa0654720:intron 45.0%
ATGCAAATCCAGATGCTGGT+GGG - chr4_3:62998245-62998264 Msa0654720:intron 45.0%
CTCAAGCAAGTTACAGACCA+GGG + chr4_3:62998566-62998585 None:intergenic 45.0%
ACTCAAGCAAGTTACAGACC+AGG + chr4_3:62998567-62998586 None:intergenic 45.0%
ACCGGATAATACTGCTGATG+TGG - chr4_3:62998824-62998843 Msa0654720:CDS 45.0%
ACTGGATAATGCTGCTGATG+TGG - chr4_3:62998942-62998961 Msa0654720:CDS 45.0%
TGCAACCAGTGTCATGTTCT+TGG - chr4_3:62999054-62999073 Msa0654720:intron 45.0%
TCTTCTTGTTCTTGGGTAGG+GGG + chr4_3:62999332-62999351 None:intergenic 45.0%
CTCTGGTCCACTCAAATTTG+TGG + chr4_3:62999403-62999422 None:intergenic 45.0%
CAGAGAACAGTTCAACCAGT+GGG - chr4_3:62999418-62999437 Msa0654720:intron 45.0%
AATGTGGAGTTTAGTGGGGT+TGG - chr4_3:62999470-62999489 Msa0654720:intron 45.0%
GCAATCTGTGAAGCAAAACC+TGG + chr4_3:62999515-62999534 None:intergenic 45.0%
GGATGCTAGGAAATAAGGGA+AGG - chr4_3:62999725-62999744 Msa0654720:five_prime_UTR 45.0%
AAATGTTAGGGTCTTCCCCT+AGG - chr4_3:62999831-62999850 Msa0654720:five_prime_UTR 45.0%
AATGTTAGGGTCTTCCCCTA+GGG - chr4_3:62999832-62999851 Msa0654720:five_prime_UTR 45.0%
!! TGAAAAAAATAATAATTAAT+TGG + chr4_3:62991827-62991846 None:intergenic 5.0%
!!! TTATTTTTTTCAAATTTTTA+CGG - chr4_3:62991835-62991854 Msa0654720:intron 5.0%
!! CTTTATAATAAAATAATAAT+AGG + chr4_3:62999906-62999925 None:intergenic 5.0%
!!! TTATTTTATTATAAAGATAA+TGG - chr4_3:62999910-62999929 Msa0654720:five_prime_UTR 5.0%
GTACTGTCCCTGTTCCGTAA+CGG + chr4_3:62991117-62991136 None:intergenic 50.0%
! GAACAGGGACAGTACGCTTT+TGG - chr4_3:62991122-62991141 Msa0654720:three_prime_UTR 50.0%
GGCAACAAAAGAACGTCCTG+TGG - chr4_3:62991988-62992007 Msa0654720:intron 50.0%
AAAACCAGCCCTTACACCGA+AGG - chr4_3:62992021-62992040 Msa0654720:intron 50.0%
GTCTGAGGAATGCTTAACCC+TGG + chr4_3:62992124-62992143 None:intergenic 50.0%
GGTTAAGCATTCCTCAGACG+AGG - chr4_3:62992125-62992144 Msa0654720:intron 50.0%
TAAAGAGATGGCCTCGTCTG+AGG + chr4_3:62992139-62992158 None:intergenic 50.0%
TGCGGAGATGGCTATAGAGA+AGG - chr4_3:62992237-62992256 Msa0654720:intron 50.0%
TTCAGTTCCTCCAACCCACT+TGG - chr4_3:62992646-62992665 Msa0654720:intron 50.0%
TCAGTTCCTCCAACCCACTT+GGG - chr4_3:62992647-62992666 Msa0654720:intron 50.0%
! TTCCCCGGTGTCAATTTCAG+TGG - chr4_3:62992733-62992752 Msa0654720:CDS 50.0%
! TCCCCGGTGTCAATTTCAGT+GGG - chr4_3:62992734-62992753 Msa0654720:CDS 50.0%
AGCCCACTGAAATTGACACC+GGG + chr4_3:62992739-62992758 None:intergenic 50.0%
GACTGCTGATCTTACTCCTC+AGG - chr4_3:62993261-62993280 Msa0654720:intron 50.0%
ATAGGGATGGCCAGGTGAAA+CGG + chr4_3:62993695-62993714 None:intergenic 50.0%
TAGCCAGTTCTTGGTTGAGC+TGG - chr4_3:62993751-62993770 Msa0654720:intron 50.0%
ATCCGCTCAGTGGTCACATT+CGG - chr4_3:62994261-62994280 Msa0654720:CDS 50.0%
!! GTCACATTCGGGCTAGTTTG+AGG - chr4_3:62994273-62994292 Msa0654720:CDS 50.0%
AGGACGAAGAGCGATCATTG+TGG - chr4_3:62994293-62994312 Msa0654720:CDS 50.0%
! AACGGATTTGACTCCACCTC+AGG + chr4_3:62994386-62994405 None:intergenic 50.0%
TCGAGCAGCAAAGAACAGTC+TGG + chr4_3:62994808-62994827 None:intergenic 50.0%
GCAAGGGCAAGATACTTGTC+TGG - chr4_3:62994903-62994922 Msa0654720:CDS 50.0%
! ATGCTTCTAGGGAAGACTCC+CGG - chr4_3:62995609-62995628 Msa0654720:intron 50.0%
ACCCCTCCAGTTAACTCTTG+TGG + chr4_3:62995694-62995713 None:intergenic 50.0%
AACGGCTCTATGAGACTGCA+GGG - chr4_3:62996078-62996097 Msa0654720:CDS 50.0%
TCTGGTGTCTGTCCATGCAA+TGG - chr4_3:62996281-62996300 Msa0654720:intron 50.0%
ACGTACATGTGTGGGTGCTT+AGG + chr4_3:62996580-62996599 None:intergenic 50.0%
! CTCTGGAGGTTCTGCAACTT+TGG + chr4_3:62996709-62996728 None:intergenic 50.0%
CAAAGTTGCAGAACCTCCAG+AGG - chr4_3:62996707-62996726 Msa0654720:CDS 50.0%
TGCTCCATTCTTTCCTCTGG+AGG + chr4_3:62996723-62996742 None:intergenic 50.0%
TCCAGAGGAAAGAATGGAGC+AGG - chr4_3:62996722-62996741 Msa0654720:CDS 50.0%
CTCGTTGCTTCGAAAGTGGA+GGG + chr4_3:62996758-62996777 None:intergenic 50.0%
ACTCGTTGCTTCGAAAGTGG+AGG + chr4_3:62996759-62996778 None:intergenic 50.0%
TCCACTTTCGAAGCAACGAG+TGG - chr4_3:62996758-62996777 Msa0654720:CDS 50.0%
TCCACTCGTTGCTTCGAAAG+TGG + chr4_3:62996762-62996781 None:intergenic 50.0%
GCTCAAAGGCTCTACAATGG+TGG - chr4_3:62997252-62997271 Msa0654720:intron 50.0%
!! TGGTTAGGAGCATTGTGCTC+TGG + chr4_3:62997321-62997340 None:intergenic 50.0%
AAAGGGAGGGGAATGTAGTG+AGG + chr4_3:62997388-62997407 None:intergenic 50.0%
GGGACAATGATAGGACACCT+AGG + chr4_3:62997496-62997515 None:intergenic 50.0%
GATGGAGTCGGGACAATGAT+AGG + chr4_3:62997505-62997524 None:intergenic 50.0%
TGTAGAGAGTGGGAAACCCT+TGG + chr4_3:62997675-62997694 None:intergenic 50.0%
! TGCTGGCAGCCTTTTGATCT+TGG - chr4_3:62998072-62998091 Msa0654720:intron 50.0%
! TGGCAGCCTTTTGATCTTGG+AGG - chr4_3:62998075-62998094 Msa0654720:intron 50.0%
GATGCAAATCCAGATGCTGG+TGG - chr4_3:62998244-62998263 Msa0654720:intron 50.0%
GAATGGTAGCAACATGGGGT+GGG + chr4_3:62998771-62998790 None:intergenic 50.0%
TGAATGGTAGCAACATGGGG+TGG + chr4_3:62998772-62998791 None:intergenic 50.0%
! AGCTTGTCTCTTTGGGGATG+TGG - chr4_3:62999226-62999245 Msa0654720:intron 50.0%
! CCACTGGTTGAACTGTTCTC+TGG + chr4_3:62999420-62999439 None:intergenic 50.0%
CCAGAGAACAGTTCAACCAG+TGG - chr4_3:62999417-62999436 Msa0654720:intron 50.0%
! GGTTTTGCTGATGTCGAACC+AGG - chr4_3:62999494-62999513 Msa0654720:intron 50.0%
! ATAGCCTTCGGTGTAAGGGC+TGG + chr4_3:62992028-62992047 None:intergenic 55.0%
CTGGAAGCTGCAGTGTGCAA+CGG + chr4_3:62992162-62992181 None:intergenic 55.0%
GGATGCAGAGCAATCTGCTG+CGG - chr4_3:62992219-62992238 Msa0654720:intron 55.0%
AGAGCAATCTGCTGCGGAGA+TGG - chr4_3:62992225-62992244 Msa0654720:intron 55.0%
ACCACCAGGTCAACCCAAGT+GGG + chr4_3:62992663-62992682 None:intergenic 55.0%
! CTTGAGAGGAGCACACTCCA+AGG + chr4_3:62992698-62992717 None:intergenic 55.0%
CTTGGAGTGTGCTCCTCTCA+AGG - chr4_3:62992696-62992715 Msa0654720:CDS 55.0%
TGTGCTCCTCTCAAGGTCTC+AGG - chr4_3:62992703-62992722 Msa0654720:CDS 55.0%
GCCCACTGAAATTGACACCG+GGG + chr4_3:62992738-62992757 None:intergenic 55.0%
TCCGCTCAGTGGTCACATTC+GGG - chr4_3:62994262-62994281 Msa0654720:CDS 55.0%
GTTGAGGCCATACGCATTCC+TGG - chr4_3:62994560-62994579 Msa0654720:CDS 55.0%
TAGGCATCCCACGGTTGCTT+AGG - chr4_3:62995287-62995306 Msa0654720:CDS 55.0%
! TGCTTCTAGGGAAGACTCCC+GGG - chr4_3:62995610-62995629 Msa0654720:intron 55.0%
AGCTGTGAGTAGTGCCTCTC+TGG + chr4_3:62995652-62995671 None:intergenic 55.0%
TCCATTTACAGAGGCCCCGT+TGG + chr4_3:62995871-62995890 None:intergenic 55.0%
GAACGGCTCTATGAGACTGC+AGG - chr4_3:62996077-62996096 Msa0654720:CDS 55.0%
CATGGACAGACACCAGAGTC+TGG + chr4_3:62996278-62996297 None:intergenic 55.0%
! TTTTGCAGAGGCCTGCTGTG+TGG - chr4_3:62996665-62996684 Msa0654720:CDS 55.0%
GCCTGCTCCATTCTTTCCTC+TGG + chr4_3:62996726-62996745 None:intergenic 55.0%
AGAGAGTGGGAAACCCTTGG+AGG + chr4_3:62997672-62997691 None:intergenic 55.0%
GTTCTTGTCCCACCAGCATC+TGG + chr4_3:62998256-62998275 None:intergenic 55.0%
CAACCAGTGGGCATCTGACT+TGG - chr4_3:62999430-62999449 Msa0654720:intron 55.0%
GTGGAGTTTAGTGGGGTTGG+TGG - chr4_3:62999473-62999492 Msa0654720:intron 55.0%
!!! GGTTTTTTCGGCGCAGCCAC+AGG + chr4_3:62992007-62992026 None:intergenic 60.0%
!! GGTCAACCCAAGTGGGTTGG+AGG + chr4_3:62992656-62992675 None:intergenic 60.0%
CCAGGTCAACCCAAGTGGGT+TGG + chr4_3:62992659-62992678 None:intergenic 60.0%
!! CCAACCCACTTGGGTTGACC+TGG - chr4_3:62992656-62992675 Msa0654720:CDS 60.0%
!! ACCCACTTGGGTTGACCTGG+TGG - chr4_3:62992659-62992678 Msa0654720:CDS 60.0%
CACCACCAGGTCAACCCAAG+TGG + chr4_3:62992664-62992683 None:intergenic 60.0%
!! TTGGGTTGACCTGGTGGTGC+TGG - chr4_3:62992665-62992684 Msa0654720:CDS 60.0%
!! TTGACCTGGTGGTGCTGGCT+TGG - chr4_3:62992670-62992689 Msa0654720:CDS 60.0%
!! TGACCTGGTGGTGCTGGCTT+GGG - chr4_3:62992671-62992690 Msa0654720:CDS 60.0%
GCCCGAATGTGACCACTGAG+CGG + chr4_3:62994266-62994285 None:intergenic 60.0%
! GCTTCTAGGGAAGACTCCCG+GGG - chr4_3:62995611-62995630 Msa0654720:intron 60.0%
! CTTCTAGGGAAGACTCCCGG+GGG - chr4_3:62995612-62995631 Msa0654720:intron 60.0%
ACTGGAGGGGTTCCCTTCCT+AGG - chr4_3:62995703-62995722 Msa0654720:intron 60.0%
CTGGAGGGGTTCCCTTCCTA+GGG - chr4_3:62995704-62995723 Msa0654720:intron 60.0%
GAGGTTCAGACAGGCGATGC+TGG + chr4_3:62995752-62995771 None:intergenic 60.0%
GCCAACGGGGCCTCTGTAAA+TGG - chr4_3:62995867-62995886 Msa0654720:intron 60.0%
! GGGTCTTACACGGGCTGCAA+AGG - chr4_3:62997000-62997019 Msa0654720:intron 60.0%
CAGCCAAGTCAGATGCCCAC+TGG + chr4_3:62999436-62999455 None:intergenic 60.0%
!! GGGCATCTGACTTGGCTGCA+CGG - chr4_3:62999438-62999457 Msa0654720:intron 60.0%
!! GTGGTGCTGGCTTGGGACCT+TGG - chr4_3:62992678-62992697 Msa0654720:CDS 65.0%
CTTGTGCAGACAGCGCTCCC+TGG + chr4_3:62997144-62997163 None:intergenic 65.0%
GGTCCCAAGCCAGCACCACC+AGG + chr4_3:62992677-62992696 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 62991077 62999934 62991077 ID=Msa0654720;Name=Msa0654720
chr4_3 mRNA 62991077 62999934 62991077 ID=Msa0654720-mRNA-1;Parent=Msa0654720;Name=Msa0654720-mRNA-1;_AED=0.04;_eAED=0.04;_QI=271|0.88|0.9|1|0.88|0.8|10|297|962
chr4_3 exon 62991077 62991811 62991077 ID=Msa0654720-mRNA-1:exon:17650;Parent=Msa0654720-mRNA-1
chr4_3 exon 62992648 62992785 62992648 ID=Msa0654720-mRNA-1:exon:17649;Parent=Msa0654720-mRNA-1
chr4_3 exon 62993990 62994106 62993990 ID=Msa0654720-mRNA-1:exon:17648;Parent=Msa0654720-mRNA-1
chr4_3 exon 62994187 62994338 62994187 ID=Msa0654720-mRNA-1:exon:17647;Parent=Msa0654720-mRNA-1
chr4_3 exon 62994463 62995403 62994463 ID=Msa0654720-mRNA-1:exon:17646;Parent=Msa0654720-mRNA-1
chr4_3 exon 62995987 62996232 62995987 ID=Msa0654720-mRNA-1:exon:17645;Parent=Msa0654720-mRNA-1
chr4_3 exon 62996312 62996805 62996312 ID=Msa0654720-mRNA-1:exon:17644;Parent=Msa0654720-mRNA-1
chr4_3 exon 62997678 62997767 62997678 ID=Msa0654720-mRNA-1:exon:17643;Parent=Msa0654720-mRNA-1
chr4_3 exon 62998753 62999054 62998753 ID=Msa0654720-mRNA-1:exon:17642;Parent=Msa0654720-mRNA-1
chr4_3 exon 62999693 62999934 62999693 ID=Msa0654720-mRNA-1:exon:17641;Parent=Msa0654720-mRNA-1
chr4_3 five_prime_UTR 62999693 62999934 62999693 ID=Msa0654720-mRNA-1:five_prime_utr;Parent=Msa0654720-mRNA-1
chr4_3 five_prime_UTR 62999026 62999054 62999026 ID=Msa0654720-mRNA-1:five_prime_utr;Parent=Msa0654720-mRNA-1
chr4_3 CDS 62998753 62999025 62998753 ID=Msa0654720-mRNA-1:cds;Parent=Msa0654720-mRNA-1
chr4_3 CDS 62997678 62997767 62997678 ID=Msa0654720-mRNA-1:cds;Parent=Msa0654720-mRNA-1
chr4_3 CDS 62996312 62996805 62996312 ID=Msa0654720-mRNA-1:cds;Parent=Msa0654720-mRNA-1
chr4_3 CDS 62995987 62996232 62995987 ID=Msa0654720-mRNA-1:cds;Parent=Msa0654720-mRNA-1
chr4_3 CDS 62994463 62995403 62994463 ID=Msa0654720-mRNA-1:cds;Parent=Msa0654720-mRNA-1
chr4_3 CDS 62994187 62994338 62994187 ID=Msa0654720-mRNA-1:cds;Parent=Msa0654720-mRNA-1
chr4_3 CDS 62993990 62994106 62993990 ID=Msa0654720-mRNA-1:cds;Parent=Msa0654720-mRNA-1
chr4_3 CDS 62992648 62992785 62992648 ID=Msa0654720-mRNA-1:cds;Parent=Msa0654720-mRNA-1
chr4_3 CDS 62991374 62991811 62991374 ID=Msa0654720-mRNA-1:cds;Parent=Msa0654720-mRNA-1
chr4_3 three_prime_UTR 62991077 62991373 62991077 ID=Msa0654720-mRNA-1:three_prime_utr;Parent=Msa0654720-mRNA-1
Gene Sequence

>Msa0654720

ATGGCAACAAAAGAACGTCCTGTGGCTGCGCCGAAAAAACCAGCCCTTACACCGAAGGCTATAATACACCAAAAGTTTGGTAAAAATGCTTGCTATGTGGTAGAGGAAGTGAAAGAGGTCTCTCAAAATGAATGTCCAGGGTTAAGCATTCCTCAGACGAGGCCATCTCTTTACCGTTGCACACTGCAGCTTCCAGAACTTACAGTTGTGACAAGGACATTTAAGAAAAAGAAGGATGCAGAGCAATCTGCTGCGGAGATGGCTATAGAGAAGATTGGTATCATTACAGAGACTGCTGATCTTACTCCTCAGGATGCACAAGAAAGTTTAGTTGCTCGAATCGCCTATATCTTTTCAGAAAAATCTGATACCATTTTTCTTTGCCATTCATCACCTATACAGTTTCTTATATCTGATCATCCGCTCAGTGGTCACATTCGGGCTAGTTTGAGGACGAAGAGCGATCATTGTGGATCAATTCCTATTTCTGTCATTGCTGTCTGTGATGCAAAGATTTCTAGTTTGTGTAAATGTATTAATCCTGAGGTGGAGTCAAATCCGTTTTTGGTCCTTCCATATATAGTAAGGGCTGCTACAAAGTTAAATGAGTTTCTTGTTACATCTGAACAACATATCTGGATTAGAAAGCTGAGTCCATATCCACAAGATATTATAGAGTCGTTAATGGAAGAGGGTGATTCACAAGAATGCATTCAGGTTGAGGCCATACGCATTCCTGGTTCAATGGAAAAACATGTTGAAGCTGTGACTCTCTGTATGTCTTTAAGAGAGTACTACCTTGATATCATTGCAAATGAACTTGGGTTAGAAGATGGGGCCAATGTTCTGATTTCAAGGAATATAGGCAAAGCTTCTTCAGAGACCAGACTGTTCTTTGCTGCTCGACAATCATATCTACTGGATCGGTCTTTTGTATCGGGAAATGGAAAAGAAACCATTCATTTTGAAGGATCTCTAAATGCAAGGGCAAGATACTTGTCTGGGCAAGATATAGTTGGTGATGCAATCTTAGCATGCATCGGATATACACGGAAATCTAGAGATCTTTTCTACGAGGATGTAACTGTTCGGTTATATTACAGGATGCTTCTAGGGAAGACTCCCGGGGGAATTTACAAATTATCCAGAGAGGCACTACTCACAGCTGAGTTGCCTTCAAGATTTACCACAAGAGTTAACTGGAGGGGTTCCCTTCCTAGGGATATTCTTTGTATGTTTTGTCGCCAGCATCGCCTGTCTGAACCTCTCTTTTCCATTATAAGTCATCCTCTCAAAATACCAACTGAATCATCAAAGTCATGTTTTAAGGCTGCAGGCTTGGGAACTGATGTGATTGAATGTGCCAACGGGGCCTCTGTAAATGGATGTCCAAAGCAATCAGATTCAGGGATGTTTAAATGTGAAATAAAGTTGCTTTCTCGGTGTGCGGAAGTAATACTTTTTTGTTCCCCTGAGGATTGTTATAGGAAGCAGAATGATGCTATTCAGAATGCCTCATTGAAACTTCTATCATGGCTGAACAAGTATTTTAATAGTGTAACTGCTCCTTTTGAACGGCTCTATGAGACTGCAGGGAACTTCAGCATCCACGTTTTTTCCAAAAACCTTTTCAGAGAGATTGTAATTGGTCAATCCATTCAGAATGGCCATCTTTATGCAATGCAGTGTAATAAATCACTTGAGCCAATGTGTGCAAATTCATTACAAGACATGTTAGTAAATGGCGTTTGCAGCTTAAAGATTGAAGGTCCAGACTCTGGTGTCTGTCCATGCAATGGATCTTTACCTTGTATTAGTTATTCAGTATCTTTGGTTGTGGAGGGTGAAAATATGAAAGAAGTTATTGAATCTTGTAATGAGTTTGAGTTTGAGATTGGGGTTGGTGCTGTGATTTCATTCATTGAGGAGGTTGTGATGCAGATGTCTGTTGGCCAGTATGCTTATTTCAACACGAACTTGCTCAATTCTGATTTGATTTTTGCTTCAGCTGGTGATTCAGCCATAATGCCGTCCTTATCTTCTAAGGCCTGCTGTGTGGAGTATGAAATAAGTTTGACCAAAGTTGCAGAACCTCCAGAGGAAAGAATGGAGCAGGCTCTTTTTAGCCCTCCACTTTCGAAGCAACGAGTGGAATTTGCAGTGCAACACATTTTAGAATCACATGCTACTACTTTGCTTGATTTTGGATGTGGATCTGGAAGCTTGTTGGAAGCATTGCTAAATTACACAACTTCGCTGGAGAAAATTGCTGGTGTTGATATTTCACAAAAGGGTCTTACACGGGCTGCAAAGGTACTGAATTCAAAATTAGATGCAAATCCAGATGCTGGTGGGACAAGAACTGACATAAAGTCAGTTATTCTTTACGAAGGTTCAATTACAAATTTTGATTCCAGGTTGCATGGGTTTGATATTGGTACTTGTTTAGAGGTGATTGAACATATGGATGAAGATCAAGCTTGTCTCTTTGGGGATGTGGCATTAAGTCGTTTTTCTCCAAAGATTCTTATTGTTTCTACACCAAATTTTGAATACAATGTAGTGCTACAGAAGTCGAATCCCCCTACCCAAGAACAAGAAGAATTGGACGGGCAAACCCTCTTACAGTCATGCAAGTTTCGCAATAATGACCACAAATTTGAGTGGACCAGAGAACAGTTCAACCAGTGGGCATCTGACTTGGCTGCACGGCACAATTATAATGTGGAGTTTAGTGGGGTTGGTGGTTTTGCTGATGTCGAACCAGGTTTTGCTTCACAGATTGCTGTGTTCAAAAGAGAATGGAGTCATGAAGATGAAGTCCAGACGCATACTGATATAGATAGCCATTATAATGTAATATGGGAATGGAATAGCAAAAAGAAATAA
Protein sequence

>Msa0654720

MATKERPVAAPKKPALTPKAIIHQKFGKNACYVVEEVKEVSQNECPGLSIPQTRPSLYRCTLQLPELTVVTRTFKKKKDAEQSAAEMAIEKIGIITETADLTPQDAQESLVARIAYIFSEKSDTIFLCHSSPIQFLISDHPLSGHIRASLRTKSDHCGSIPISVIAVCDAKISSLCKCINPEVESNPFLVLPYIVRAATKLNEFLVTSEQHIWIRKLSPYPQDIIESLMEEGDSQECIQVEAIRIPGSMEKHVEAVTLCMSLREYYLDIIANELGLEDGANVLISRNIGKASSETRLFFAARQSYLLDRSFVSGNGKETIHFEGSLNARARYLSGQDIVGDAILACIGYTRKSRDLFYEDVTVRLYYRMLLGKTPGGIYKLSREALLTAELPSRFTTRVNWRGSLPRDILCMFCRQHRLSEPLFSIISHPLKIPTESSKSCFKAAGLGTDVIECANGASVNGCPKQSDSGMFKCEIKLLSRCAEVILFCSPEDCYRKQNDAIQNASLKLLSWLNKYFNSVTAPFERLYETAGNFSIHVFSKNLFREIVIGQSIQNGHLYAMQCNKSLEPMCANSLQDMLVNGVCSLKIEGPDSGVCPCNGSLPCISYSVSLVVEGENMKEVIESCNEFEFEIGVGAVISFIEEVVMQMSVGQYAYFNTNLLNSDLIFASAGDSAIMPSLSSKACCVEYEISLTKVAEPPEERMEQALFSPPLSKQRVEFAVQHILESHATTLLDFGCGSGSLLEALLNYTTSLEKIAGVDISQKGLTRAAKVLNSKLDANPDAGGTRTDIKSVILYEGSITNFDSRLHGFDIGTCLEVIEHMDEDQACLFGDVALSRFSPKILIVSTPNFEYNVVLQKSNPPTQEQEELDGQTLLQSCKFRNNDHKFEWTREQFNQWASDLAARHNYNVEFSGVGGFADVEPGFASQIAVFKREWSHEDEVQTHTDIDSHYNVIWEWNSKKK*