Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0473080 | XP_024635313.1 | 97.044 | 778 | 22 | 1 | 1 | 777 | 1 | 778 | 0.0 | 1559 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0473080 | sp|Q8BTK5|SMYD4_MOUSE | 26.619 | 278 | 159 | 4 | 461 | 735 | 510 | 745 | 8.17e-18 | 92.0 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0473080 | G7J9Q5 | 97.044 | 778 | 22 | 1 | 1 | 777 | 1 | 778 | 0.0 | 1559 |
Gene ID | Type | Classification |
---|---|---|
Msa0473080 | TR | SET |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000550 | Msa0473080 | -0.825300 | 5.054333e-54 | -8.615850e-47 |
Msa0001790 | Msa0473080 | 0.802873 | 4.562954e-49 | -8.615850e-47 |
Msa0004880 | Msa0473080 | 0.808650 | 2.790616e-50 | -8.615850e-47 |
Msa0004920 | Msa0473080 | 0.804174 | 2.452294e-49 | -8.615850e-47 |
Msa0011720 | Msa0473080 | 0.805313 | 1.417906e-49 | -8.615850e-47 |
Msa0017510 | Msa0473080 | 0.811516 | 6.734336e-51 | -8.615850e-47 |
Msa0027390 | Msa0473080 | 0.830778 | 2.424887e-55 | -8.615850e-47 |
Msa0028640 | Msa0473080 | 0.800007 | 1.763379e-48 | -8.615850e-47 |
Msa0044020 | Msa0473080 | 0.806681 | 7.309510e-50 | -8.615850e-47 |
Msa0045490 | Msa0473080 | 0.819306 | 1.244722e-52 | -8.615850e-47 |
Msa0048000 | Msa0473080 | 0.844201 | 8.753728e-59 | -8.615850e-47 |
Msa0050730 | Msa0473080 | 0.800818 | 1.205955e-48 | -8.615850e-47 |
Msa0050760 | Msa0473080 | 0.824616 | 7.329186e-54 | -8.615850e-47 |
Msa0051770 | Msa0473080 | 0.801888 | 7.280684e-49 | -8.615850e-47 |
Msa0053900 | Msa0473080 | 0.806697 | 7.252581e-50 | -8.615850e-47 |
Msa0078650 | Msa0473080 | 0.800878 | 1.172022e-48 | -8.615850e-47 |
Msa0081230 | Msa0473080 | 0.839993 | 1.136134e-57 | -8.615850e-47 |
Msa0089360 | Msa0473080 | 0.808775 | 2.624056e-50 | -8.615850e-47 |
Msa0089380 | Msa0473080 | 0.800652 | 1.303547e-48 | -8.615850e-47 |
Msa0092990 | Msa0473080 | 0.814592 | 1.424504e-51 | -8.615850e-47 |
Msa0101810 | Msa0473080 | -0.811339 | 7.355144e-51 | -8.615850e-47 |
Msa0105420 | Msa0473080 | 0.812448 | 4.217593e-51 | -8.615850e-47 |
Msa0112750 | Msa0473080 | 0.802916 | 4.471337e-49 | -8.615850e-47 |
Msa0113970 | Msa0473080 | 0.824159 | 9.386797e-54 | -8.615850e-47 |
Msa0114540 | Msa0473080 | -0.801776 | 7.674928e-49 | -8.615850e-47 |
Msa0115810 | Msa0473080 | 0.813683 | 2.260552e-51 | -8.615850e-47 |
Msa0120040 | Msa0473080 | -0.802013 | 6.861789e-49 | -8.615850e-47 |
Msa0120340 | Msa0473080 | 0.811938 | 5.450275e-51 | -8.615850e-47 |
Msa0122590 | Msa0473080 | 0.820234 | 7.637527e-53 | -8.615850e-47 |
Msa0126370 | Msa0473080 | 0.802451 | 5.574848e-49 | -8.615850e-47 |
Msa0136380 | Msa0473080 | 0.813287 | 2.762728e-51 | -8.615850e-47 |
Msa0140300 | Msa0473080 | 0.801149 | 1.031794e-48 | -8.615850e-47 |
Msa0140780 | Msa0473080 | 0.818150 | 2.277831e-52 | -8.615850e-47 |
Msa0140860 | Msa0473080 | 0.804927 | 1.707795e-49 | -8.615850e-47 |
Msa0142950 | Msa0473080 | 0.810092 | 1.368960e-50 | -8.615850e-47 |
Msa0143380 | Msa0473080 | 0.823706 | 1.199188e-53 | -8.615850e-47 |
Msa0148340 | Msa0473080 | 0.803924 | 2.762883e-49 | -8.615850e-47 |
Msa0150800 | Msa0473080 | 0.805168 | 1.520790e-49 | -8.615850e-47 |
Msa0151180 | Msa0473080 | 0.800568 | 1.355755e-48 | -8.615850e-47 |
Msa0157100 | Msa0473080 | 0.815849 | 7.486961e-52 | -8.615850e-47 |
Msa0157290 | Msa0473080 | 0.810574 | 1.077212e-50 | -8.615850e-47 |
Msa0159770 | Msa0473080 | 0.818337 | 2.065691e-52 | -8.615850e-47 |
Msa0165300 | Msa0473080 | 0.829742 | 4.342243e-55 | -8.615850e-47 |
Msa0166870 | Msa0473080 | 0.801009 | 1.101986e-48 | -8.615850e-47 |
Msa0170140 | Msa0473080 | 0.804888 | 1.739791e-49 | -8.615850e-47 |
Msa0173990 | Msa0473080 | 0.826857 | 2.154845e-54 | -8.615850e-47 |
Msa0188630 | Msa0473080 | 0.809946 | 1.471292e-50 | -8.615850e-47 |
Msa0188680 | Msa0473080 | -0.815250 | 1.017920e-51 | -8.615850e-47 |
Msa0191040 | Msa0473080 | 0.809455 | 1.876647e-50 | -8.615850e-47 |
Msa0191250 | Msa0473080 | 0.833854 | 4.197707e-56 | -8.615850e-47 |
Msa0195770 | Msa0473080 | 0.803306 | 3.712844e-49 | -8.615850e-47 |
Msa0197930 | Msa0473080 | 0.809072 | 2.266348e-50 | -8.615850e-47 |
Msa0205850 | Msa0473080 | 0.853812 | 1.865252e-61 | -8.615850e-47 |
Msa0216240 | Msa0473080 | 0.808496 | 3.010010e-50 | -8.615850e-47 |
Msa0217400 | Msa0473080 | 0.814164 | 1.770979e-51 | -8.615850e-47 |
Msa0220440 | Msa0473080 | 0.806666 | 7.361704e-50 | -8.615850e-47 |
Msa0220580 | Msa0473080 | 0.815011 | 1.150043e-51 | -8.615850e-47 |
Msa0223740 | Msa0473080 | 0.801084 | 1.064107e-48 | -8.615850e-47 |
Msa0233340 | Msa0473080 | 0.809646 | 1.707263e-50 | -8.615850e-47 |
Msa0235890 | Msa0473080 | 0.804561 | 2.036672e-49 | -8.615850e-47 |
Msa0372660 | Msa0473080 | 0.806915 | 6.522877e-50 | -8.615850e-47 |
Msa0374850 | Msa0473080 | 0.800876 | 1.173382e-48 | -8.615850e-47 |
Msa0376590 | Msa0473080 | 0.812431 | 4.254335e-51 | -8.615850e-47 |
Msa0379640 | Msa0473080 | 0.813810 | 2.120184e-51 | -8.615850e-47 |
Msa0388960 | Msa0473080 | 0.802840 | 4.633909e-49 | -8.615850e-47 |
Msa0389340 | Msa0473080 | 0.807403 | 5.140801e-50 | -8.615850e-47 |
Msa0393710 | Msa0473080 | 0.811188 | 7.932980e-51 | -8.615850e-47 |
Msa0410650 | Msa0473080 | 0.818897 | 1.541930e-52 | -8.615850e-47 |
Msa0414170 | Msa0473080 | 0.803019 | 4.257147e-49 | -8.615850e-47 |
Msa0419820 | Msa0473080 | 0.807504 | 4.895119e-50 | -8.615850e-47 |
Msa0426330 | Msa0473080 | 0.848388 | 6.329482e-60 | -8.615850e-47 |
Msa0426360 | Msa0473080 | 0.891486 | 3.800628e-74 | -8.615850e-47 |
Msa0426400 | Msa0473080 | 0.883446 | 4.456517e-71 | -8.615850e-47 |
Msa0428170 | Msa0473080 | 0.810601 | 1.062771e-50 | -8.615850e-47 |
Msa0436370 | Msa0473080 | 0.806965 | 6.365607e-50 | -8.615850e-47 |
Msa0442850 | Msa0473080 | 0.802236 | 6.173145e-49 | -8.615850e-47 |
Msa0448550 | Msa0473080 | -0.811722 | 6.072799e-51 | -8.615850e-47 |
Msa0449830 | Msa0473080 | 0.817895 | 2.600491e-52 | -8.615850e-47 |
Msa0458440 | Msa0473080 | 0.806136 | 9.524533e-50 | -8.615850e-47 |
Msa0464900 | Msa0473080 | 0.858776 | 6.529963e-63 | -8.615850e-47 |
Msa0465670 | Msa0473080 | -0.813446 | 2.549597e-51 | -8.615850e-47 |
Msa0466390 | Msa0473080 | 0.813077 | 3.072550e-51 | -8.615850e-47 |
Msa0472680 | Msa0473080 | 0.837166 | 6.099940e-57 | -8.615850e-47 |
Msa0473080 | Msa0473240 | 0.802141 | 6.457597e-49 | -8.615850e-47 |
Msa0473080 | Msa0477130 | -0.806507 | 7.955774e-50 | -8.615850e-47 |
Msa0473080 | Msa0484780 | 0.855051 | 8.176612e-62 | -8.615850e-47 |
Msa0473080 | Msa0484840 | 0.812397 | 4.328757e-51 | -8.615850e-47 |
Msa0473080 | Msa0485120 | 0.830602 | 2.677560e-55 | -8.615850e-47 |
Msa0473080 | Msa0489030 | 0.806001 | 1.016596e-49 | -8.615850e-47 |
Msa0473080 | Msa0489100 | 0.805744 | 1.151354e-49 | -8.615850e-47 |
Msa0473080 | Msa0507680 | 0.818778 | 1.641514e-52 | -8.615850e-47 |
Msa0473080 | Msa0509610 | 0.818635 | 1.768268e-52 | -8.615850e-47 |
Msa0473080 | Msa0511720 | -0.804871 | 1.754615e-49 | -8.615850e-47 |
Msa0473080 | Msa0516370 | 0.815629 | 8.384072e-52 | -8.615850e-47 |
Msa0473080 | Msa0517110 | 0.821665 | 3.577674e-53 | -8.615850e-47 |
Msa0473080 | Msa0517330 | 0.820411 | 6.957681e-53 | -8.615850e-47 |
Msa0473080 | Msa0521540 | 0.802477 | 5.507949e-49 | -8.615850e-47 |
Msa0473080 | Msa0523460 | 0.806332 | 8.658296e-50 | -8.615850e-47 |
Msa0473080 | Msa0526890 | 0.814637 | 1.392406e-51 | -8.615850e-47 |
Msa0473080 | Msa0532710 | 0.822225 | 2.653920e-53 | -8.615850e-47 |
Msa0473080 | Msa0534590 | 0.829391 | 5.285434e-55 | -8.615850e-47 |
Msa0473080 | Msa0536220 | 0.803139 | 4.019356e-49 | -8.615850e-47 |
Msa0473080 | Msa0545070 | 0.817067 | 3.995729e-52 | -8.615850e-47 |
Msa0473080 | Msa0547400 | 0.803782 | 2.957097e-49 | -8.615850e-47 |
Msa0473080 | Msa0551890 | 0.819418 | 1.173639e-52 | -8.615850e-47 |
Msa0473080 | Msa0555020 | 0.815626 | 8.396234e-52 | -8.615850e-47 |
Msa0473080 | Msa0556860 | 0.801541 | 8.575475e-49 | -8.615850e-47 |
Msa0473080 | Msa0560470 | 0.800565 | 1.357674e-48 | -8.615850e-47 |
Msa0473080 | Msa0568820 | 0.813298 | 2.747136e-51 | -8.615850e-47 |
Msa0473080 | Msa0571700 | 0.802324 | 5.920924e-49 | -8.615850e-47 |
Msa0473080 | Msa0572420 | 0.800793 | 1.220174e-48 | -8.615850e-47 |
Msa0473080 | Msa0572480 | 0.810520 | 1.106601e-50 | -8.615850e-47 |
Msa0473080 | Msa0575470 | 0.803363 | 3.612750e-49 | -8.615850e-47 |
Msa0473080 | Msa0577220 | 0.816209 | 6.220942e-52 | -8.615850e-47 |
Msa0473080 | Msa0577500 | 0.801426 | 9.054376e-49 | -8.615850e-47 |
Msa0473080 | Msa0578970 | 0.818322 | 2.082034e-52 | -8.615850e-47 |
Msa0473080 | Msa0590800 | 0.825913 | 3.616879e-54 | -8.615850e-47 |
Msa0473080 | Msa0598460 | 0.813205 | 2.879594e-51 | -8.615850e-47 |
Msa0473080 | Msa0599580 | 0.815824 | 7.585814e-52 | -8.615850e-47 |
Msa0473080 | Msa0606360 | 0.804900 | 1.730327e-49 | -8.615850e-47 |
Msa0473080 | Msa0608620 | 0.805232 | 1.474694e-49 | -8.615850e-47 |
Msa0473080 | Msa0610590 | 0.823815 | 1.130139e-53 | -8.615850e-47 |
Msa0473080 | Msa0619070 | 0.807750 | 4.340474e-50 | -8.615850e-47 |
Msa0473080 | Msa0621590 | 0.800007 | 1.763944e-48 | -8.615850e-47 |
Msa0473080 | Msa0626220 | 0.807913 | 4.007480e-50 | -8.615850e-47 |
Msa0473080 | Msa0631120 | 0.828857 | 7.121314e-55 | -8.615850e-47 |
Msa0473080 | Msa0638070 | 0.821568 | 3.767951e-53 | -8.615850e-47 |
Msa0473080 | Msa0638280 | 0.803508 | 3.371457e-49 | -8.615850e-47 |
Msa0473080 | Msa0638320 | 0.806074 | 9.811905e-50 | -8.615850e-47 |
Msa0473080 | Msa0643250 | 0.802021 | 6.834825e-49 | -8.615850e-47 |
Msa0473080 | Msa0647980 | 0.807272 | 5.481649e-50 | -8.615850e-47 |
Msa0473080 | Msa0649980 | 0.813034 | 3.139103e-51 | -8.615850e-47 |
Msa0473080 | Msa0650070 | 0.811981 | 5.334750e-51 | -8.615850e-47 |
Msa0473080 | Msa0651190 | 0.817294 | 3.553169e-52 | -8.615850e-47 |
Msa0473080 | Msa0654720 | 0.807617 | 4.631380e-50 | -8.615850e-47 |
Msa0473080 | Msa0657610 | 0.819380 | 1.197520e-52 | -8.615850e-47 |
Msa0473080 | Msa0657970 | 0.811663 | 6.255101e-51 | -8.615850e-47 |
Msa0473080 | Msa0662570 | 0.816615 | 5.047215e-52 | -8.615850e-47 |
Msa0473080 | Msa0662650 | 0.815972 | 7.030490e-52 | -8.615850e-47 |
Msa0473080 | Msa0667050 | 0.821201 | 4.578120e-53 | -8.615850e-47 |
Msa0473080 | Msa0669340 | 0.820547 | 6.473850e-53 | -8.615850e-47 |
Msa0473080 | Msa0677270 | 0.809955 | 1.465288e-50 | -8.615850e-47 |
Msa0473080 | Msa0682550 | 0.808960 | 2.396095e-50 | -8.615850e-47 |
Msa0473080 | Msa0682950 | 0.823653 | 1.233933e-53 | -8.615850e-47 |
Msa0473080 | Msa0684500 | 0.805275 | 1.444413e-49 | -8.615850e-47 |
Msa0473080 | Msa0688070 | 0.813412 | 2.593855e-51 | -8.615850e-47 |
Msa0473080 | Msa0692230 | 0.812538 | 4.030620e-51 | -8.615850e-47 |
Msa0473080 | Msa0693380 | 0.830734 | 2.485421e-55 | -8.615850e-47 |
Msa0473080 | Msa0696640 | 0.832004 | 1.210652e-55 | -8.615850e-47 |
Msa0473080 | Msa0706370 | 0.803655 | 3.143369e-49 | -8.615850e-47 |
Msa0473080 | Msa0708860 | 0.816368 | 5.732260e-52 | -8.615850e-47 |
Msa0473080 | Msa0709500 | 0.803929 | 2.757410e-49 | -8.615850e-47 |
Msa0473080 | Msa0724830 | 0.803097 | 4.101491e-49 | -8.615850e-47 |
Msa0473080 | Msa0726860 | 0.802627 | 5.129335e-49 | -8.615850e-47 |
Msa0473080 | Msa0735620 | -0.819679 | 1.023392e-52 | -8.615850e-47 |
Msa0473080 | Msa0739120 | 0.842183 | 3.020355e-58 | -8.615850e-47 |
Msa0473080 | Msa0741900 | 0.811642 | 6.322857e-51 | -8.615850e-47 |
Msa0473080 | Msa0743200 | 0.814839 | 1.255817e-51 | -8.615850e-47 |
Msa0473080 | Msa0750350 | 0.822249 | 2.620829e-53 | -8.615850e-47 |
Msa0473080 | Msa0750430 | 0.821649 | 3.609111e-53 | -8.615850e-47 |
Msa0473080 | Msa0754720 | -0.838777 | 2.350432e-57 | -8.615850e-47 |
Msa0473080 | Msa0756630 | -0.837895 | 3.968011e-57 | -8.615850e-47 |
Msa0473080 | Msa0765380 | 0.835280 | 1.839924e-56 | -8.615850e-47 |
Msa0473080 | Msa0766810 | 0.824729 | 6.892432e-54 | -8.615850e-47 |
Msa0473080 | Msa0767220 | 0.832846 | 7.487000e-56 | -8.615850e-47 |
Msa0473080 | Msa0787260 | 0.838383 | 2.971226e-57 | -8.615850e-47 |
Msa0473080 | Msa0788710 | 0.824546 | 7.612939e-54 | -8.615850e-47 |
Msa0473080 | Msa0789570 | 0.800813 | 1.208756e-48 | -8.615850e-47 |
Msa0473080 | Msa0790390 | -0.810814 | 9.558992e-51 | -8.615850e-47 |
Msa0473080 | Msa0790510 | 0.801679 | 8.037204e-49 | -8.615850e-47 |
Msa0473080 | Msa0804680 | 0.862236 | 5.847178e-64 | -8.615850e-47 |
Msa0473080 | Msa0810020 | 0.808453 | 3.074143e-50 | -8.615850e-47 |
Msa0473080 | Msa0816590 | 0.806587 | 7.650066e-50 | -8.615850e-47 |
Msa0473080 | Msa0816710 | 0.807721 | 4.402430e-50 | -8.615850e-47 |
Msa0473080 | Msa0822990 | 0.825095 | 5.650836e-54 | -8.615850e-47 |
Msa0473080 | Msa0824660 | 0.807666 | 4.521356e-50 | -8.615850e-47 |
Msa0473080 | Msa0829620 | 0.833401 | 5.446102e-56 | -8.615850e-47 |
Msa0473080 | Msa0843780 | -0.818866 | 1.567542e-52 | -8.615850e-47 |
Msa0473080 | Msa0844230 | 0.815271 | 1.007074e-51 | -8.615850e-47 |
Msa0473080 | Msa0844240 | 0.806684 | 7.297619e-50 | -8.615850e-47 |
Msa0473080 | Msa0853320 | 0.804866 | 1.758611e-49 | -8.615850e-47 |
Msa0473080 | Msa0863370 | 0.826696 | 2.354636e-54 | -8.615850e-47 |
Msa0473080 | Msa0867890 | 0.831384 | 1.720707e-55 | -8.615850e-47 |
Msa0473080 | Msa0869100 | 0.823643 | 1.240351e-53 | -8.615850e-47 |
Msa0473080 | Msa0877410 | 0.804380 | 2.220630e-49 | -8.615850e-47 |
Msa0473080 | Msa0880140 | 0.813254 | 2.808794e-51 | -8.615850e-47 |
Msa0473080 | Msa0882510 | 0.835258 | 1.863568e-56 | -8.615850e-47 |
Msa0473080 | Msa0891040 | 0.806717 | 7.182238e-50 | -8.615850e-47 |
Msa0473080 | Msa0893810 | 0.810113 | 1.354683e-50 | -8.615850e-47 |
Msa0473080 | Msa0896750 | 0.823127 | 1.637637e-53 | -8.615850e-47 |
Msa0473080 | Msa0899230 | 0.813196 | 2.893386e-51 | -8.615850e-47 |
Msa0473080 | Msa0908050 | 0.822161 | 2.747452e-53 | -8.615850e-47 |
Msa0473080 | Msa0908170 | 0.857402 | 1.672683e-62 | -8.615850e-47 |
Msa0473080 | Msa0910980 | -0.835072 | 2.076006e-56 | -8.615850e-47 |
Msa0473080 | Msa0927670 | 0.823301 | 1.490891e-53 | -8.615850e-47 |
Msa0473080 | Msa0933230 | 0.841547 | 4.446770e-58 | -8.615850e-47 |
Msa0473080 | Msa0933310 | 0.826441 | 2.707679e-54 | -8.615850e-47 |
Msa0473080 | Msa0959010 | 0.817259 | 3.617500e-52 | -8.615850e-47 |
Msa0473080 | Msa0960160 | 0.828683 | 7.843333e-55 | -8.615850e-47 |
Msa0473080 | Msa0971090 | 0.830355 | 3.076855e-55 | -8.615850e-47 |
Msa0473080 | Msa0982240 | 0.804335 | 2.269817e-49 | -8.615850e-47 |
Msa0473080 | Msa0990960 | 0.805132 | 1.547367e-49 | -8.615850e-47 |
Msa0473080 | Msa0993530 | 0.836263 | 1.036566e-56 | -8.615850e-47 |
Msa0473080 | Msa0999040 | 0.829799 | 4.206009e-55 | -8.615850e-47 |
Msa0473080 | Msa1002480 | 0.810587 | 1.070228e-50 | -8.615850e-47 |
Msa0473080 | Msa1010350 | 0.803303 | 3.718008e-49 | -8.615850e-47 |
Msa0473080 | Msa1027630 | 0.801358 | 9.349571e-49 | -8.615850e-47 |
Msa0473080 | Msa1032170 | 0.816178 | 6.323195e-52 | -8.615850e-47 |
Msa0473080 | Msa1035300 | 0.801678 | 8.039481e-49 | -8.615850e-47 |
Msa0473080 | Msa1035310 | 0.803945 | 2.736461e-49 | -8.615850e-47 |
Msa0473080 | Msa1037700 | -0.841726 | 3.989182e-58 | -8.615850e-47 |
Msa0473080 | Msa1039880 | 0.812415 | 4.287817e-51 | -8.615850e-47 |
Msa0473080 | Msa1040890 | 0.816194 | 6.270966e-52 | -8.615850e-47 |
Msa0473080 | Msa1045200 | 0.804837 | 1.783003e-49 | -8.615850e-47 |
Msa0473080 | Msa1046300 | 0.823155 | 1.612693e-53 | -8.615850e-47 |
Msa0473080 | Msa1052290 | 0.804865 | 1.759406e-49 | -8.615850e-47 |
Msa0473080 | Msa1065610 | 0.805767 | 1.138786e-49 | -8.615850e-47 |
Msa0473080 | Msa1080160 | 0.828986 | 6.627773e-55 | -8.615850e-47 |
Msa0473080 | Msa1082500 | 0.842942 | 1.899552e-58 | -8.615850e-47 |
Msa0473080 | Msa1084260 | 0.804766 | 1.845487e-49 | -8.615850e-47 |
Msa0473080 | Msa1085200 | 0.816846 | 4.480927e-52 | -8.615850e-47 |
Msa0473080 | Msa1085300 | 0.807353 | 5.268090e-50 | -8.615850e-47 |
Msa0473080 | Msa1097840 | 0.846898 | 1.626547e-59 | -8.615850e-47 |
Msa0473080 | Msa1098560 | 0.817175 | 3.779183e-52 | -8.615850e-47 |
Msa0473080 | Msa1100720 | 0.802414 | 5.675233e-49 | -8.615850e-47 |
Msa0473080 | Msa1111180 | 0.828764 | 7.496722e-55 | -8.615850e-47 |
Msa0473080 | Msa1112390 | 0.801805 | 7.572807e-49 | -8.615850e-47 |
Msa0473080 | Msa1127270 | 0.816416 | 5.592628e-52 | -8.615850e-47 |
Msa0473080 | Msa1130210 | -0.831733 | 1.411986e-55 | -8.615850e-47 |
Msa0473080 | Msa1130270 | -0.824848 | 6.461316e-54 | -8.615850e-47 |
Msa0473080 | Msa1131220 | 0.800639 | 1.311212e-48 | -8.615850e-47 |
Msa0473080 | Msa1137600 | 0.821686 | 3.538506e-53 | -8.615850e-47 |
Msa0473080 | Msa1139890 | 0.805563 | 1.256441e-49 | -8.615850e-47 |
Msa0473080 | Msa1140690 | 0.821434 | 4.045501e-53 | -8.615850e-47 |
Msa0473080 | Msa1145250 | -0.808402 | 3.152965e-50 | -8.615850e-47 |
Msa0473080 | Msa1160400 | 0.817141 | 3.846441e-52 | -8.615850e-47 |
Msa0473080 | Msa1170280 | 0.851351 | 9.392834e-61 | -8.615850e-47 |
Msa0473080 | Msa1170730 | 0.894425 | 2.497045e-75 | -8.615850e-47 |
Msa0473080 | Msa1171360 | 0.800688 | 1.281602e-48 | -8.615850e-47 |
Msa0473080 | Msa1172670 | 0.833219 | 6.046052e-56 | -8.615850e-47 |
Msa0473080 | Msa1193290 | 0.800696 | 1.276585e-48 | -8.615850e-47 |
Msa0473080 | Msa1197060 | 0.809412 | 1.916347e-50 | -8.615850e-47 |
Msa0473080 | Msa1199560 | 0.811708 | 6.117019e-51 | -8.615850e-47 |
Msa0473080 | Msa1206020 | 0.800706 | 1.270625e-48 | -8.615850e-47 |
Msa0473080 | Msa1214880 | 0.852131 | 5.644259e-61 | -8.615850e-47 |
Msa0473080 | Msa1214890 | 0.845988 | 2.879682e-59 | -8.615850e-47 |
Msa0473080 | Msa1217660 | 0.805344 | 1.396954e-49 | -8.615850e-47 |
Msa0473080 | Msa1217810 | 0.836817 | 7.490807e-57 | -8.615850e-47 |
Msa0473080 | Msa1217830 | 0.812926 | 3.316137e-51 | -8.615850e-47 |
Msa0473080 | Msa1217860 | 0.811326 | 7.403917e-51 | -8.615850e-47 |
Msa0473080 | Msa1217940 | 0.806278 | 8.888911e-50 | -8.615850e-47 |
Msa0473080 | Msa1224480 | 0.813381 | 2.634672e-51 | -8.615850e-47 |
Msa0473080 | Msa1227400 | 0.821882 | 3.187941e-53 | -8.615850e-47 |
Msa0473080 | Msa1233500 | 0.829183 | 5.937446e-55 | -8.615850e-47 |
Msa0473080 | Msa1233890 | 0.819274 | 1.265989e-52 | -8.615850e-47 |
Msa0473080 | Msa1240180 | 0.801671 | 8.065945e-49 | -8.615850e-47 |
Msa0473080 | Msa1255040 | -0.808153 | 3.562388e-50 | -8.615850e-47 |
Msa0473080 | Msa1276440 | 0.817328 | 3.491809e-52 | -8.615850e-47 |
Msa0473080 | Msa1278840 | 0.828948 | 6.768914e-55 | -8.615850e-47 |
Msa0473080 | Msa1279210 | 0.807130 | 5.875663e-50 | -8.615850e-47 |
Msa0473080 | Msa1288420 | 0.807172 | 5.754256e-50 | -8.615850e-47 |
Msa0473080 | Msa1297090 | 0.816363 | 5.746501e-52 | -8.615850e-47 |
Msa0473080 | Msa1300350 | -0.802116 | 6.536304e-49 | -8.615850e-47 |
Msa0473080 | Msa1300860 | 0.835655 | 1.478778e-56 | -8.615850e-47 |
Msa0473080 | Msa1300870 | 0.825188 | 5.372431e-54 | -8.615850e-47 |
Msa0473080 | Msa1303250 | 0.825315 | 5.013271e-54 | -8.615850e-47 |
Msa0473080 | Msa1305340 | 0.802509 | 5.424512e-49 | -8.615850e-47 |
Msa0473080 | Msa1306840 | 0.803340 | 3.652186e-49 | -8.615850e-47 |
Msa0473080 | Msa1306850 | 0.813246 | 2.820283e-51 | -8.615850e-47 |
Msa0473080 | Msa1314340 | 0.826493 | 2.631659e-54 | -8.615850e-47 |
Msa0473080 | Msa1318240 | 0.808388 | 3.174493e-50 | -8.615850e-47 |
Msa0473080 | Msa1320620 | 0.824199 | 9.186535e-54 | -8.615850e-47 |
Msa0473080 | Msa1320740 | 0.831494 | 1.617336e-55 | -8.615850e-47 |
Msa0473080 | Msa1322190 | 0.801328 | 9.483632e-49 | -8.615850e-47 |
Msa0473080 | Msa1328700 | 0.818575 | 1.824994e-52 | -8.615850e-47 |
Msa0473080 | Msa1328850 | 0.800500 | 1.400028e-48 | -8.615850e-47 |
Msa0473080 | Msa1331910 | 0.842241 | 2.915542e-58 | -8.615850e-47 |
Msa0473080 | Msa1331920 | 0.855690 | 5.327249e-62 | -8.615850e-47 |
Msa0473080 | Msa1333730 | 0.805803 | 1.118843e-49 | -8.615850e-47 |
Msa0473080 | Msa1340650 | 0.831727 | 1.416538e-55 | -8.615850e-47 |
Msa0473080 | Msa1348360 | 0.805601 | 1.233692e-49 | -8.615850e-47 |
Msa0473080 | Msa1359040 | 0.801566 | 8.477517e-49 | -8.615850e-47 |
Msa0473080 | Msa1362510 | 0.813080 | 3.067272e-51 | -8.615850e-47 |
Msa0473080 | Msa1364830 | 0.807011 | 6.226555e-50 | -8.615850e-47 |
Msa0473080 | Msa1371640 | 0.825084 | 5.682981e-54 | -8.615850e-47 |
Msa0473080 | Msa1372760 | 0.808664 | 2.772007e-50 | -8.615850e-47 |
Msa0473080 | Msa1376200 | 0.811214 | 7.831833e-51 | -8.615850e-47 |
Msa0473080 | Msa1379850 | 0.809429 | 1.900313e-50 | -8.615850e-47 |
Msa0473080 | Msa1384350 | 0.805749 | 1.148736e-49 | -8.615850e-47 |
Msa0473080 | Msa1385670 | 0.828646 | 8.008505e-55 | -8.615850e-47 |
Msa0473080 | Msa1386230 | 0.808373 | 3.196940e-50 | -8.615850e-47 |
Msa0473080 | Msa1392260 | 0.809277 | 2.048879e-50 | -8.615850e-47 |
Msa0473080 | Msa1393040 | 0.816513 | 5.319913e-52 | -8.615850e-47 |
Msa0473080 | Msa1398890 | 0.818639 | 1.764758e-52 | -8.615850e-47 |
Msa0473080 | Msa1403580 | -0.816365 | 5.741566e-52 | -8.615850e-47 |
Msa0473080 | Msa1404540 | 0.849362 | 3.394547e-60 | -8.615850e-47 |
Msa0473080 | Msa1409870 | 0.805133 | 1.546374e-49 | -8.615850e-47 |
Msa0473080 | Msa1410210 | 0.811571 | 6.548620e-51 | -8.615850e-47 |
Msa0473080 | Msa1410470 | 0.803881 | 2.821299e-49 | -8.615850e-47 |
Msa0473080 | Msa1416390 | 0.845699 | 3.450266e-59 | -8.615850e-47 |
Msa0473080 | Msa1420140 | 0.803385 | 3.574897e-49 | -8.615850e-47 |
Msa0473080 | Msa1423880 | 0.803794 | 2.941035e-49 | -8.615850e-47 |
Msa0473080 | Msa1424450 | 0.816529 | 5.275318e-52 | -8.615850e-47 |
Msa0473080 | Msa1425010 | 0.818907 | 1.533743e-52 | -8.615850e-47 |
Msa0473080 | Msa1425100 | 0.804341 | 2.263428e-49 | -8.615850e-47 |
Msa0473080 | Msa1431060 | 0.844768 | 6.159718e-59 | -8.615850e-47 |
Msa0473080 | Msa1439960 | 0.814849 | 1.249538e-51 | -8.615850e-47 |
Msa0473080 | Msa1440000 | 0.809879 | 1.521086e-50 | -8.615850e-47 |
Msa0473080 | Msa1440600 | 0.823566 | 1.292947e-53 | -8.615850e-47 |
Msa0473080 | Msa1441190 | 0.800168 | 1.635722e-48 | -8.615850e-47 |
Msa0473080 | Msa1443290 | -0.822431 | 2.378090e-53 | -8.615850e-47 |
Msa0473080 | Msa1445030 | 0.821159 | 4.683357e-53 | -8.615850e-47 |
Msa0473080 | Msa1452480 | 0.817268 | 3.601017e-52 | -8.615850e-47 |
Msa0473080 | Msa1453560 | 0.803554 | 3.298300e-49 | -8.615850e-47 |
Msa0473080 | Msa1457430 | 0.821770 | 3.384135e-53 | -8.615850e-47 |
Msa0473080 | Msa1459180 | 0.808405 | 3.147164e-50 | -8.615850e-47 |
Msa0473080 | Msa1460020 | 0.806740 | 7.101700e-50 | -8.615850e-47 |
Msa0473080 | Msa1460890 | 0.807917 | 3.998277e-50 | -8.615850e-47 |
Msa0473080 | Msa1461280 | 0.801222 | 9.967148e-49 | -8.615850e-47 |
Msa0242480 | Msa0473080 | 0.800834 | 1.196567e-48 | -8.615850e-47 |
Msa0243100 | Msa0473080 | 0.824601 | 7.389851e-54 | -8.615850e-47 |
Msa0243690 | Msa0473080 | 0.804774 | 1.837762e-49 | -8.615850e-47 |
Msa0243710 | Msa0473080 | 0.821501 | 3.904118e-53 | -8.615850e-47 |
Msa0244860 | Msa0473080 | 0.803057 | 4.179611e-49 | -8.615850e-47 |
Msa0245940 | Msa0473080 | 0.829703 | 4.438305e-55 | -8.615850e-47 |
Msa0246430 | Msa0473080 | 0.836671 | 8.163198e-57 | -8.615850e-47 |
Msa0248520 | Msa0473080 | 0.808254 | 3.389527e-50 | -8.615850e-47 |
Msa0248980 | Msa0473080 | 0.834554 | 2.803398e-56 | -8.615850e-47 |
Msa0259560 | Msa0473080 | 0.802851 | 4.611758e-49 | -8.615850e-47 |
Msa0260810 | Msa0473080 | 0.847450 | 1.147348e-59 | -8.615850e-47 |
Msa0264930 | Msa0473080 | 0.829174 | 5.966640e-55 | -8.615850e-47 |
Msa0269450 | Msa0473080 | 0.820734 | 5.864681e-53 | -8.615850e-47 |
Msa0270100 | Msa0473080 | 0.819948 | 8.880651e-53 | -8.615850e-47 |
Msa0270220 | Msa0473080 | -0.825004 | 5.937631e-54 | -8.615850e-47 |
Msa0270270 | Msa0473080 | 0.801351 | 9.380435e-49 | -8.615850e-47 |
Msa0271810 | Msa0473080 | 0.825850 | 3.743144e-54 | -8.615850e-47 |
Msa0276920 | Msa0473080 | 0.829470 | 5.056530e-55 | -8.615850e-47 |
Msa0282250 | Msa0473080 | 0.831620 | 1.505289e-55 | -8.615850e-47 |
Msa0283450 | Msa0473080 | 0.809441 | 1.889308e-50 | -8.615850e-47 |
Msa0283520 | Msa0473080 | 0.806448 | 8.187730e-50 | -8.615850e-47 |
Msa0284520 | Msa0473080 | 0.827670 | 1.376175e-54 | -8.615850e-47 |
Msa0287310 | Msa0473080 | 0.801125 | 1.043487e-48 | -8.615850e-47 |
Msa0287410 | Msa0473080 | 0.810088 | 1.371719e-50 | -8.615850e-47 |
Msa0287650 | Msa0473080 | 0.855427 | 6.353904e-62 | -8.615850e-47 |
Msa0291500 | Msa0473080 | 0.809129 | 2.204081e-50 | -8.615850e-47 |
Msa0296760 | Msa0473080 | 0.808757 | 2.646917e-50 | -8.615850e-47 |
Msa0299730 | Msa0473080 | 0.801828 | 7.489847e-49 | -8.615850e-47 |
Msa0302980 | Msa0473080 | 0.822799 | 1.952044e-53 | -8.615850e-47 |
Msa0305700 | Msa0473080 | 0.817967 | 2.505957e-52 | -8.615850e-47 |
Msa0307830 | Msa0473080 | -0.830778 | 2.424887e-55 | -8.615850e-47 |
Msa0311690 | Msa0473080 | 0.804975 | 1.668661e-49 | -8.615850e-47 |
Msa0311700 | Msa0473080 | 0.812807 | 3.521307e-51 | -8.615850e-47 |
Msa0311860 | Msa0473080 | 0.841889 | 3.613869e-58 | -8.615850e-47 |
Msa0317730 | Msa0473080 | 0.800388 | 1.475201e-48 | -8.615850e-47 |
Msa0320800 | Msa0473080 | 0.800842 | 1.192324e-48 | -8.615850e-47 |
Msa0323080 | Msa0473080 | 0.808889 | 2.480588e-50 | -8.615850e-47 |
Msa0323180 | Msa0473080 | 0.814230 | 1.712318e-51 | -8.615850e-47 |
Msa0326110 | Msa0473080 | 0.804579 | 2.018628e-49 | -8.615850e-47 |
Msa0327410 | Msa0473080 | 0.820033 | 8.494513e-53 | -8.615850e-47 |
Msa0329320 | Msa0473080 | 0.803669 | 3.121648e-49 | -8.615850e-47 |
Msa0329350 | Msa0473080 | 0.810739 | 9.921975e-51 | -8.615850e-47 |
Msa0332000 | Msa0473080 | 0.808190 | 3.497970e-50 | -8.615850e-47 |
Msa0333920 | Msa0473080 | 0.812234 | 4.697643e-51 | -8.615850e-47 |
Msa0334040 | Msa0473080 | 0.812601 | 3.905712e-51 | -8.615850e-47 |
Msa0334360 | Msa0473080 | 0.801968 | 7.008065e-49 | -8.615850e-47 |
Msa0335040 | Msa0473080 | 0.813743 | 2.193154e-51 | -8.615850e-47 |
Msa0337060 | Msa0473080 | 0.800581 | 1.347837e-48 | -8.615850e-47 |
Msa0341540 | Msa0473080 | 0.808499 | 3.005323e-50 | -8.615850e-47 |
Msa0351810 | Msa0473080 | 0.813359 | 2.663623e-51 | -8.615850e-47 |
Msa0356890 | Msa0473080 | -0.810549 | 1.090771e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0473080 | MtrunA17_Chr3g0128421 | 97.044 | 778 | 22 | 1 | 1 | 777 | 1 | 778 | 0.0 | 1559 |
Msa0473080 | MtrunA17_Chr3g0115061 | 22.430 | 321 | 188 | 10 | 459 | 766 | 182 | 454 | 2.43e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0473080 | AT1G33400.1 | 44.949 | 792 | 416 | 7 | 1 | 776 | 1 | 788 | 0.0 | 684 |
Msa0473080 | AT1G33400.2 | 44.800 | 750 | 394 | 7 | 43 | 776 | 55 | 800 | 0.0 | 662 |
Msa0473080 | AT1G33400.3 | 44.320 | 625 | 328 | 7 | 168 | 776 | 2 | 622 | 0.0 | 538 |
Find 158 sgRNAs with CRISPR-Local
Find 522 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGCCATTTGAAAGTAAAT+TGG | 0.199937 | 3_3:-75549841 | Msa0473080:CDS |
AACACTGCGCCAGAACAATT+TGG | 0.217761 | 3_3:+75547953 | None:intergenic |
TTTGCCCACCTGCCTTTATT+TGG | 0.225137 | 3_3:+75550238 | None:intergenic |
AGAAACTCAAACAAGCAATT+AGG | 0.229319 | 3_3:-75553387 | Msa0473080:CDS |
TATTGTCTTAAACATTCTTA+TGG | 0.241604 | 3_3:-75549789 | Msa0473080:CDS |
TTGTTGTCGATGTAGTTAAA+TGG | 0.243220 | 3_3:-75545262 | Msa0473080:intron |
ATAACGTAGTCTCGTGAATA+TGG | 0.244246 | 3_3:-75545053 | Msa0473080:three_prime_UTR |
TACTACTATATTTGTGCTCT+TGG | 0.267628 | 3_3:+75552076 | None:intergenic |
TATGAACAGAAGCGTCATTT+TGG | 0.281117 | 3_3:+75547632 | None:intergenic |
TCATACAATTCACTTTAATC+TGG | 0.303169 | 3_3:+75549486 | None:intergenic |
AAGCCTTAATATGCATAAAA+AGG | 0.306459 | 3_3:-75547540 | Msa0473080:intron |
CACTTTATAGCCCACTTTGC+TGG | 0.311906 | 3_3:+75545485 | None:intergenic |
AGAAAATATGCATGAACATT+TGG | 0.324630 | 3_3:+75549109 | None:intergenic |
ACTGCCTTCTGACATAGTTT+TGG | 0.338485 | 3_3:-75550055 | Msa0473080:CDS |
AAATTTGCATGCATACAATA+AGG | 0.339149 | 3_3:-75547238 | Msa0473080:CDS |
TTCATCCGTCCAACTTTACT+TGG | 0.341657 | 3_3:-75545659 | Msa0473080:CDS |
AGTGGGAGAATTACAATTAT+CGG | 0.343600 | 3_3:-75546600 | Msa0473080:CDS |
ACCATGCCTCTTCCTTTATC+AGG | 0.346989 | 3_3:+75550893 | None:intergenic |
GAAACTCAAACAAGCAATTA+GGG | 0.353034 | 3_3:-75553386 | Msa0473080:CDS |
AGCTTAAATGACAGGTCATT+TGG | 0.360209 | 3_3:-75545442 | Msa0473080:three_prime_UTR |
ATTGCTTGTTTGAGTTTCTC+TGG | 0.360886 | 3_3:+75553391 | None:intergenic |
CACCTGCCTTTATTTGGCAT+TGG | 0.370556 | 3_3:+75550244 | None:intergenic |
TTGCTGGAAAAGCATTTGAT+TGG | 0.382988 | 3_3:+75545501 | None:intergenic |
TGTTGTCGATGTAGTTAAAT+GGG | 0.396158 | 3_3:-75545261 | Msa0473080:intron |
CTATATTTGTGCTCTTGGAT+TGG | 0.397564 | 3_3:+75552081 | None:intergenic |
ACACTGCGCCAGAACAATTT+GGG | 0.399716 | 3_3:+75547954 | None:intergenic |
GGCAAAGGAAGAAGAAAGAG+AGG | 0.401323 | 3_3:-75553473 | Msa0473080:five_prime_UTR |
TTCCTTATCTTCAGTACCTT+AGG | 0.401357 | 3_3:-75545555 | Msa0473080:CDS |
TGATATAGAGATTCCATTGA+TGG | 0.401639 | 3_3:+75549755 | None:intergenic |
GGAGCTATGCTTGCCATCAA+TGG | 0.404119 | 3_3:-75549768 | Msa0473080:CDS |
CTCGCACCAATGCCAAATAA+AGG | 0.406668 | 3_3:-75550250 | Msa0473080:CDS |
GGCAAAGCTATTTATAAAGT+TGG | 0.408738 | 3_3:-75549157 | Msa0473080:CDS |
TTGTTTCTTACCATAGCATA+TGG | 0.409749 | 3_3:+75550824 | None:intergenic |
AGCATATTCAGCAAGATTGT+TGG | 0.410224 | 3_3:+75550170 | None:intergenic |
TCAATTTCACCAACTTCAAA+AGG | 0.415930 | 3_3:+75552957 | None:intergenic |
TGTGTGAACCCAAATTGTTC+TGG | 0.426197 | 3_3:-75547962 | Msa0473080:CDS |
ATGCAGTTCTTACCGTGATC+TGG | 0.426263 | 3_3:-75547587 | Msa0473080:CDS |
ATTTCTAAATTTCTCTCCTA+AGG | 0.427458 | 3_3:+75545539 | None:intergenic |
TCATTGTAAAGCATCCATTC+AGG | 0.429879 | 3_3:-75546573 | Msa0473080:intron |
GCATATTCAGCAAGATTGTT+GGG | 0.430584 | 3_3:+75550171 | None:intergenic |
CTCCTAAGGTACTGAAGATA+AGG | 0.430916 | 3_3:+75545553 | None:intergenic |
GAATCCAATTTACTTTCAAA+TGG | 0.433870 | 3_3:+75549837 | None:intergenic |
GTAGGTCGTTCAAGCAATAA+TGG | 0.435815 | 3_3:+75550319 | None:intergenic |
AGATCTCAAAGCGTCTGAAA+TGG | 0.439734 | 3_3:+75547278 | None:intergenic |
TTTAACTAGTAATGTGGAAC+AGG | 0.443391 | 3_3:-75549384 | Msa0473080:intron |
GAACATTTGGTTGGCAAGAA+TGG | 0.445371 | 3_3:+75549122 | None:intergenic |
ATCAGTCTGGATGGAATTTG+AGG | 0.445545 | 3_3:-75545209 | Msa0473080:three_prime_UTR |
AAATGTACACTGGAATGAAA+TGG | 0.446196 | 3_3:+75549404 | None:intergenic |
ACAACACAAGCCGTAGCAGC+TGG | 0.447881 | 3_3:-75549064 | Msa0473080:CDS |
AATGATTGTGAGCAAAAGAT+TGG | 0.447994 | 3_3:-75550129 | Msa0473080:CDS |
GTAGTACGTACCTGGTGAAA+AGG | 0.449674 | 3_3:+75553298 | None:intergenic |
CCGCCATCTGATGTTTCACC+AGG | 0.449958 | 3_3:-75550869 | Msa0473080:CDS |
GCCTCTTCCTTTATCAGGTA+CGG | 0.454469 | 3_3:+75550898 | None:intergenic |
GCATTTCATTGTCAATGTAC+TGG | 0.457687 | 3_3:-75548031 | Msa0473080:CDS |
TTATGGACTTCATGCAGACT+TGG | 0.466543 | 3_3:-75545581 | Msa0473080:CDS |
GGAAAGGCAAATATTGCATT+GGG | 0.466884 | 3_3:-75552206 | Msa0473080:CDS |
TCTGGCATCAGGCATGGTAT+AGG | 0.467429 | 3_3:-75552232 | Msa0473080:intron |
AAACACACCTTTGAATAGCT+TGG | 0.472303 | 3_3:+75552699 | None:intergenic |
CATACAATTCACTTTAATCT+GGG | 0.482197 | 3_3:+75549487 | None:intergenic |
AGGCTTTGCTGTAGTCAGAA+GGG | 0.482651 | 3_3:-75545189 | Msa0473080:three_prime_UTR |
CATGGACTGTCAGATCAGTC+TGG | 0.483310 | 3_3:-75549434 | Msa0473080:CDS |
ACACTTTGCAGCTTTATTTG+AGG | 0.485080 | 3_3:+75550923 | None:intergenic |
AATATGCATGAACATTTGGT+TGG | 0.489714 | 3_3:+75549113 | None:intergenic |
AGTGTCTCCGTACCTGATAA+AGG | 0.493636 | 3_3:-75550905 | Msa0473080:CDS |
AAGAGTGTCGAATCATCAAC+AGG | 0.494373 | 3_3:-75552146 | Msa0473080:CDS |
AGTGGTGTAGAGGAAGAAGA+TGG | 0.494688 | 3_3:-75553434 | Msa0473080:exon |
TAAGCAATAACTATATCATC+AGG | 0.495058 | 3_3:+75545697 | None:intergenic |
CGTAGCAGCTGGGTGTCAGC+TGG | 0.497449 | 3_3:-75549053 | Msa0473080:CDS |
GTCAACAGCATTGGTCGAAT+AGG | 0.497911 | 3_3:-75545622 | Msa0473080:CDS |
AAATTGTTCTGGCGCAGTGT+TGG | 0.499251 | 3_3:-75547951 | Msa0473080:CDS |
TATTGTTATAACACTTACTA+CGG | 0.506825 | 3_3:-75545100 | Msa0473080:three_prime_UTR |
ATGTCAGAAGGCAGTACAGC+AGG | 0.510667 | 3_3:+75550063 | None:intergenic |
GGCTTTAGATTATTATACTC+AGG | 0.514932 | 3_3:-75553095 | Msa0473080:intron |
TAACGTAGTCTCGTGAATAT+GGG | 0.522517 | 3_3:-75545052 | Msa0473080:three_prime_UTR |
AAGAGAGGGAAAGAAAACAA+AGG | 0.526427 | 3_3:-75553458 | Msa0473080:five_prime_UTR |
TGATGTTTCACCAGGTTCGT+TGG | 0.526556 | 3_3:-75550861 | Msa0473080:CDS |
GAGGCTTTGCTGTAGTCAGA+AGG | 0.526857 | 3_3:-75545190 | Msa0473080:three_prime_UTR |
AAACAAAGGAAGTGGTGTAG+AGG | 0.527368 | 3_3:-75553444 | Msa0473080:five_prime_UTR |
TAGTACGTACCTGGTGAAAA+GGG | 0.527455 | 3_3:+75553299 | None:intergenic |
CTCTAATGCTGATTATGTCA+AGG | 0.527726 | 3_3:-75553116 | Msa0473080:CDS |
TGTCAGCTGGAATTGTCTTA+CGG | 0.527745 | 3_3:-75549040 | Msa0473080:CDS |
AGGAAAGGCAAATATTGCAT+TGG | 0.532015 | 3_3:-75552207 | Msa0473080:CDS |
GGGAAAGAAAACAAAGGAAG+TGG | 0.532284 | 3_3:-75553452 | Msa0473080:five_prime_UTR |
GGAAAAGCATTTGATTGGAG+AGG | 0.538529 | 3_3:+75545506 | None:intergenic |
GGAATTGTCTTACGGTCCAC+AGG | 0.539785 | 3_3:-75549032 | Msa0473080:intron |
TATTGTCACCCAAGTAAAGT+TGG | 0.540829 | 3_3:+75545650 | None:intergenic |
TTAAAATCAATAGACGCTCA+TGG | 0.541128 | 3_3:-75549452 | Msa0473080:CDS |
AAGAACGTAATTATCTTCTG+TGG | 0.542033 | 3_3:+75550203 | None:intergenic |
CAATGGAATCTCTATATCAC+AGG | 0.542199 | 3_3:-75549751 | Msa0473080:intron |
CACGAGAGGTGGTTTGATGT+TGG | 0.542732 | 3_3:-75553494 | None:intergenic |
TGCTGAAGAACCATATGCTA+TGG | 0.542990 | 3_3:-75550834 | Msa0473080:intron |
CTGCATTTCAAACAGACTCC+AGG | 0.545321 | 3_3:+75547604 | None:intergenic |
GGAGAACAGCTTGAGTACTA+CGG | 0.546828 | 3_3:-75552039 | Msa0473080:CDS |
TTCCCGCACAGAGCATAGCT+AGG | 0.547122 | 3_3:+75553187 | None:intergenic |
ATACAAGGAACTCTATCAGC+AGG | 0.548739 | 3_3:+75550297 | None:intergenic |
TCAATCACAGCTTAAATGAC+AGG | 0.549658 | 3_3:-75545450 | Msa0473080:three_prime_UTR |
ATATTTACATGTCACACACT+TGG | 0.549891 | 3_3:-75545159 | Msa0473080:three_prime_UTR |
AGATTGTCTCAAGATCAGTC+TGG | 0.551035 | 3_3:-75545222 | Msa0473080:three_prime_UTR |
CACCAATGCCAAATAAAGGC+AGG | 0.551316 | 3_3:-75550246 | Msa0473080:CDS |
TCATCCGTCCAACTTTACTT+GGG | 0.552845 | 3_3:-75545658 | Msa0473080:CDS |
AGTGTGTGACATGTAAATAT+CGG | 0.554543 | 3_3:+75545162 | None:intergenic |
ACACTGACTGCTGAGCGGCT+TGG | 0.554958 | 3_3:+75545368 | None:intergenic |
CAGCTGACACCCAGCTGCTA+CGG | 0.561855 | 3_3:+75549054 | None:intergenic |
GAAAGAAAAGATGTCCTGGT+TGG | 0.562187 | 3_3:+75545076 | None:intergenic |
AGTAGTACAGCCGCGACAGA+AGG | 0.563195 | 3_3:-75552060 | Msa0473080:CDS |
ACCCTAGCTATGCTCTGTGC+GGG | 0.563516 | 3_3:-75553189 | Msa0473080:CDS |
TCCGTACCTGATAAAGGAAG+AGG | 0.569385 | 3_3:-75550899 | Msa0473080:CDS |
GAGAACAGCTTGAGTACTAC+GGG | 0.569449 | 3_3:-75552038 | Msa0473080:intron |
TCCCGCACAGAGCATAGCTA+GGG | 0.570994 | 3_3:+75553188 | None:intergenic |
AATAGTGCTGTCAACAGCAT+TGG | 0.571018 | 3_3:-75545631 | Msa0473080:CDS |
TCAGCATGAACCAACGAACC+TGG | 0.571881 | 3_3:+75550851 | None:intergenic |
GATATGTCCAAGCTATTCAA+AGG | 0.573360 | 3_3:-75552706 | Msa0473080:intron |
ATGAATGTCAAGGAGTGCAT+TGG | 0.576376 | 3_3:-75550086 | Msa0473080:CDS |
TTACTTTATCAGCAACAGCT+AGG | 0.576576 | 3_3:+75547888 | None:intergenic |
TTATGAAAGAAAAGATGTCC+TGG | 0.578078 | 3_3:+75545072 | None:intergenic |
GGCTTTGCTGTAGTCAGAAG+GGG | 0.580864 | 3_3:-75545188 | Msa0473080:three_prime_UTR |
TGTCTCAAGATCAGTCTGGA+TGG | 0.581811 | 3_3:-75545218 | Msa0473080:three_prime_UTR |
AGGTGGTTTGATGTTGGCAA+AGG | 0.584111 | 3_3:-75553488 | None:intergenic |
CAATGCCAAATAAAGGCAGG+TGG | 0.596184 | 3_3:-75550243 | Msa0473080:CDS |
CCAGCCAAAACTATGTCAGA+AGG | 0.604974 | 3_3:+75550051 | None:intergenic |
TGTACATTTAACTAGTAATG+TGG | 0.607675 | 3_3:-75549390 | Msa0473080:CDS |
ATATGGAAATGACAGGCTGC+AGG | 0.608699 | 3_3:-75547334 | Msa0473080:intron |
TGAAATATAGGCATTACGAA+AGG | 0.609774 | 3_3:-75552982 | Msa0473080:intron |
ATTACTAGTTAAATGTACAC+TGG | 0.610954 | 3_3:+75549394 | None:intergenic |
TGCATTTCAAACAGACTCCA+GGG | 0.616596 | 3_3:+75547605 | None:intergenic |
GAACATAAACATGAATGTCA+AGG | 0.620275 | 3_3:-75550096 | Msa0473080:CDS |
CATTGGTGCGAGCAGTACAA+TGG | 0.620389 | 3_3:+75550261 | None:intergenic |
CAACACAAGCCGTAGCAGCT+GGG | 0.623688 | 3_3:-75549063 | Msa0473080:CDS |
ACACTTACTACGGTCCAACC+AGG | 0.624236 | 3_3:-75545090 | Msa0473080:three_prime_UTR |
TTGGTATGAAAGATCTACAA+TGG | 0.624289 | 3_3:-75545423 | Msa0473080:three_prime_UTR |
ACCTGATAAAGGAAGAGGCA+TGG | 0.627081 | 3_3:-75550894 | Msa0473080:CDS |
AAGAAGATGGAGACTCTGAA+AGG | 0.627632 | 3_3:-75553421 | Msa0473080:exon |
GCAAAGGAAGAAGAAAGAGA+GGG | 0.630138 | 3_3:-75553472 | Msa0473080:five_prime_UTR |
GTGTCGAATCATCAACAGGA+GGG | 0.630754 | 3_3:-75552142 | Msa0473080:CDS |
GGTATTGAACACGATATACA+AGG | 0.636863 | 3_3:+75550282 | None:intergenic |
GTCACCCAAGTAAAGTTGGA+CGG | 0.637144 | 3_3:+75545654 | None:intergenic |
TATATCTCCTAGGTCAGAGT+GGG | 0.639961 | 3_3:-75549178 | Msa0473080:intron |
CACGTGAAGACTCCAGATCA+CGG | 0.641430 | 3_3:+75547575 | None:intergenic |
GCTTCTGTTCATATTCACCC+TGG | 0.643407 | 3_3:-75547622 | Msa0473080:CDS |
GCGTTGAAATATAAGCAGCT+TGG | 0.647283 | 3_3:-75553151 | Msa0473080:CDS |
ATACAATAAGGTTATTGCAG+AGG | 0.648948 | 3_3:-75547226 | Msa0473080:intron |
GACCCTAGCTATGCTCTGTG+CGG | 0.649554 | 3_3:-75553190 | Msa0473080:CDS |
TGTCACACACTTGGTTCTCG+AGG | 0.654841 | 3_3:-75545150 | Msa0473080:three_prime_UTR |
AATGCCAAATAAAGGCAGGT+GGG | 0.655407 | 3_3:-75550242 | Msa0473080:CDS |
AAGGAACTCTATCAGCAGGT+AGG | 0.661361 | 3_3:+75550301 | None:intergenic |
CATCAGGCATGGTATAGGAG+AGG | 0.668519 | 3_3:-75552227 | Msa0473080:intron |
AAGACAATATAACAATACAA+TGG | 0.671651 | 3_3:+75549803 | None:intergenic |
GAACCTGGTGAAACATCAGA+TGG | 0.672386 | 3_3:+75550866 | None:intergenic |
TCACACAATGAAAAGCATTG+AGG | 0.676894 | 3_3:+75547978 | None:intergenic |
GGGAGAATTACAATTATCGG+CGG | 0.684311 | 3_3:-75546597 | Msa0473080:CDS |
AAGCTGTTCTCCTTCTGTCG+CGG | 0.691374 | 3_3:+75552050 | None:intergenic |
AGTGTCGAATCATCAACAGG+AGG | 0.693713 | 3_3:-75552143 | Msa0473080:CDS |
GGACTGTCAGATCAGTCTGG+AGG | 0.695431 | 3_3:-75549431 | Msa0473080:CDS |
GGCATGGTATAGGAGAGGAA+AGG | 0.699336 | 3_3:-75552222 | Msa0473080:CDS |
GCTTTGCTGTAGTCAGAAGG+GGG | 0.705999 | 3_3:-75545187 | Msa0473080:three_prime_UTR |
CCTGGTGAAACATCAGATGG+CGG | 0.706873 | 3_3:+75550869 | None:intergenic |
TTATATCTCCTAGGTCAGAG+TGG | 0.711387 | 3_3:-75549179 | Msa0473080:intron |
AAGAAACACTGACTGCTGAG+CGG | 0.726873 | 3_3:+75545363 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATATTTTTTCAATATGATA+GGG | - | chr3_3:75548909-75548928 | Msa0473080:intron | 10.0% |
!!! | ATTATTATTACTTAGTTTTT+TGG | - | chr3_3:75549547-75549566 | Msa0473080:intron | 10.0% |
!! | AAATAAAATAAATCAAAACA+TGG | - | chr3_3:75550326-75550345 | Msa0473080:CDS | 10.0% |
!! | AAAAAAAAAAAAAAAAAAGC+GGG | - | chr3_3:75552047-75552066 | Msa0473080:CDS | 10.0% |
!! | TTATTAATAGTGAGAAATTA+GGG | + | chr3_3:75545276-75545295 | None:intergenic | 15.0% |
!! | AATAAACTAAGATTACAAAA+AGG | + | chr3_3:75545865-75545884 | None:intergenic | 15.0% |
!! | ATTTATCAAAACAAAGTAAT+TGG | - | chr3_3:75546020-75546039 | Msa0473080:intron | 15.0% |
!! | AAAGATTGAAATATTTATGT+CGG | - | chr3_3:75546831-75546850 | Msa0473080:intron | 15.0% |
!!! | TTTTTTTCCTTTGTTTTTTT+GGG | - | chr3_3:75548813-75548832 | Msa0473080:intron | 15.0% |
!!! | GAATATTTTTTCAATATGAT+AGG | - | chr3_3:75548908-75548927 | Msa0473080:intron | 15.0% |
!! | TATGATAATTTAGACATTAT+TGG | - | chr3_3:75549271-75549290 | Msa0473080:intron | 15.0% |
!! | AACTAAGTAATAATAATTAC+AGG | + | chr3_3:75549544-75549563 | None:intergenic | 15.0% |
!!! | TTTTATTTTTTTATGTTGAG+TGG | + | chr3_3:75550314-75550333 | None:intergenic | 15.0% |
!!! | AAAAAATGAAGTGTTTTAAA+GGG | + | chr3_3:75550828-75550847 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTTTTTGCAGAA+TGG | + | chr3_3:75552027-75552046 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAAAAAAAGCG+GGG | - | chr3_3:75552048-75552067 | Msa0473080:CDS | 15.0% |
!! | GTTATTAATAGTGAGAAATT+AGG | + | chr3_3:75545277-75545296 | None:intergenic | 20.0% |
!!! | TTCTCTCTTTTCTTTATTTT+TGG | - | chr3_3:75545498-75545517 | Msa0473080:three_prime_UTR | 20.0% |
!!! | GTTTTTGCAATTTGAAATAT+AGG | - | chr3_3:75545533-75545552 | Msa0473080:exon | 20.0% |
!! | TTAAAAAGTGATTATGAATG+TGG | + | chr3_3:75545681-75545700 | None:intergenic | 20.0% |
!! | CTTAGTTTATTTGTACTATT+AGG | - | chr3_3:75545874-75545893 | Msa0473080:intron | 20.0% |
!!! | TTTTGATAACTTCATTATTC+TGG | - | chr3_3:75546277-75546296 | Msa0473080:intron | 20.0% |
!! | TAAATATTTCAATCTTTCCT+CGG | + | chr3_3:75546828-75546847 | None:intergenic | 20.0% |
!!! | ATTTTCTCATGCTTAATTTT+GGG | + | chr3_3:75546901-75546920 | None:intergenic | 20.0% |
!!! | TATTTTCTCATGCTTAATTT+TGG | + | chr3_3:75546902-75546921 | None:intergenic | 20.0% |
!! | ATTTAATTCTATAAGGAAGA+GGG | + | chr3_3:75547000-75547019 | None:intergenic | 20.0% |
!! | AATTTAATTCTATAAGGAAG+AGG | + | chr3_3:75547001-75547020 | None:intergenic | 20.0% |
!! | GTGCATAATTTAATTCTATA+AGG | + | chr3_3:75547007-75547026 | None:intergenic | 20.0% |
!!! | GCATATTAGTTTCTTAATAT+GGG | + | chr3_3:75547348-75547367 | None:intergenic | 20.0% |
!!! | AGCATATTAGTTTCTTAATA+TGG | + | chr3_3:75547349-75547368 | None:intergenic | 20.0% |
!!! | ATTCAATCCTATTTTACATA+TGG | - | chr3_3:75547458-75547477 | Msa0473080:intron | 20.0% |
!! | ATCTTTCATAAATAAATGCA+AGG | + | chr3_3:75547518-75547537 | None:intergenic | 20.0% |
!!! | ACAAAATGCTTTTAGATAAA+TGG | - | chr3_3:75547773-75547792 | Msa0473080:intron | 20.0% |
!!! | GAATTTGCTTTGAATTAATT+GGG | + | chr3_3:75547991-75548010 | None:intergenic | 20.0% |
!!! | TGAATTTGCTTTGAATTAAT+TGG | + | chr3_3:75547992-75548011 | None:intergenic | 20.0% |
!! | GGATTAATGCTTATAAAATA+TGG | + | chr3_3:75548095-75548114 | None:intergenic | 20.0% |
!! | AAGACAATATAACAATACAA+TGG | + | chr3_3:75548727-75548746 | None:intergenic | 20.0% |
!! | TATTGTCTTAAACATTCTTA+TGG | - | chr3_3:75548738-75548757 | Msa0473080:intron | 20.0% |
!!! | CTTTTTTTCCTTTGTTTTTT+TGG | - | chr3_3:75548812-75548831 | Msa0473080:intron | 20.0% |
!! | AAAATGCATAAATATAGAAC+AGG | + | chr3_3:75549235-75549254 | None:intergenic | 20.0% |
!! | AATGTCTAAATTATCATAGT+AGG | + | chr3_3:75549269-75549288 | None:intergenic | 20.0% |
!! | ATTTCATAATTAGCACATTT+GGG | - | chr3_3:75549760-75549779 | Msa0473080:CDS | 20.0% |
!!! | ATTCATCTTTTAGAAAACTT+TGG | + | chr3_3:75550474-75550493 | None:intergenic | 20.0% |
!!! | GAAAAAATGAAGTGTTTTAA+AGG | + | chr3_3:75550829-75550848 | None:intergenic | 20.0% |
!!! | TTAAAACACTTCATTTTTTC+AGG | - | chr3_3:75550829-75550848 | Msa0473080:intron | 20.0% |
!!! | TAGTTCTGAATAATTTTCAA+AGG | + | chr3_3:75551056-75551075 | None:intergenic | 20.0% |
!! | AAGAGAATAAAGTAAAATCA+TGG | - | chr3_3:75551474-75551493 | Msa0473080:intron | 20.0% |
!! | TAAAAAGAAAATTACCTGAA+TGG | + | chr3_3:75551971-75551990 | None:intergenic | 20.0% |
!! | AAAAAAAAAAAAAAAAGCGG+GGG | - | chr3_3:75552049-75552068 | Msa0473080:CDS | 20.0% |
!! | GTGGAAATATAAATAATTCT+TGG | - | chr3_3:75552164-75552183 | Msa0473080:CDS | 20.0% |
!! | GAAATATAAATAATTCTTGG+TGG | - | chr3_3:75552167-75552186 | Msa0473080:CDS | 20.0% |
!! | TATTGTTATAACACTTACTA+CGG | - | chr3_3:75553427-75553446 | Msa0473080:exon | 20.0% |
! | ATTAGGGATTTAGTTGAAAT+GGG | + | chr3_3:75545260-75545279 | None:intergenic | 25.0% |
! | AATTAGGGATTTAGTTGAAA+TGG | + | chr3_3:75545261-75545280 | None:intergenic | 25.0% |
! | TTTCAAATTACGTTTGTAAG+TGG | + | chr3_3:75546102-75546121 | None:intergenic | 25.0% |
! | TAAATCAACATACTGTTTCA+AGG | + | chr3_3:75546757-75546776 | None:intergenic | 25.0% |
!!! | ATGTTGATTTAAGATACATG+TGG | - | chr3_3:75546766-75546785 | Msa0473080:intron | 25.0% |
! | TATTTACCTACTATTGCTAT+AGG | + | chr3_3:75546799-75546818 | None:intergenic | 25.0% |
! | TATAGCAATAGTAGGTAAAT+AGG | - | chr3_3:75546798-75546817 | Msa0473080:intron | 25.0% |
! | ATAGCAATAGTAGGTAAATA+GGG | - | chr3_3:75546799-75546818 | Msa0473080:intron | 25.0% |
!! | TTTTCTCATGCTTAATTTTG+GGG | + | chr3_3:75546900-75546919 | None:intergenic | 25.0% |
! | GAATTAAATTATGCACCTTA+TGG | - | chr3_3:75547011-75547030 | Msa0473080:intron | 25.0% |
! | TGTAAAATAGGATTGAATAG+CGG | + | chr3_3:75547456-75547475 | None:intergenic | 25.0% |
! | GATTACACCATATGTAAAAT+AGG | + | chr3_3:75547468-75547487 | None:intergenic | 25.0% |
! | AAAAGGAGAGGAAAAATAAA+TGG | + | chr3_3:75547541-75547560 | None:intergenic | 25.0% |
!!! | TCCTTTTTGAGATAATAAGA+TGG | - | chr3_3:75547554-75547573 | Msa0473080:CDS | 25.0% |
! | ACCATCTTATTATCTCAAAA+AGG | + | chr3_3:75547558-75547577 | None:intergenic | 25.0% |
!!! | TTGATACTGTTTTTCTTTTC+AGG | - | chr3_3:75548154-75548173 | Msa0473080:intron | 25.0% |
! | CATCATTGTTATCTGATTAT+AGG | - | chr3_3:75548603-75548622 | Msa0473080:intron | 25.0% |
!! | TATGCCATTTGAAAGTAAAT+TGG | - | chr3_3:75548686-75548705 | Msa0473080:intron | 25.0% |
! | GAATCCAATTTACTTTCAAA+TGG | + | chr3_3:75548693-75548712 | None:intergenic | 25.0% |
! | AAAAAATATTCTGCTACACA+AGG | + | chr3_3:75548899-75548918 | None:intergenic | 25.0% |
! | CATACAATTCACTTTAATCT+GGG | + | chr3_3:75549043-75549062 | None:intergenic | 25.0% |
! | TCATACAATTCACTTTAATC+TGG | + | chr3_3:75549044-75549063 | None:intergenic | 25.0% |
! | ATTACTAGTTAAATGTACAC+TGG | + | chr3_3:75549136-75549155 | None:intergenic | 25.0% |
! | TGTACATTTAACTAGTAATG+TGG | - | chr3_3:75549137-75549156 | Msa0473080:CDS | 25.0% |
! | AGAAAATATGCATGAACATT+TGG | + | chr3_3:75549421-75549440 | None:intergenic | 25.0% |
! | GATTTCATAATTAGCACATT+TGG | - | chr3_3:75549759-75549778 | Msa0473080:CDS | 25.0% |
! | TTTCATAATTAGCACATTTG+GGG | - | chr3_3:75549761-75549780 | Msa0473080:CDS | 25.0% |
! | GCTCAAAATAATATAGTAGT+AGG | - | chr3_3:75549946-75549965 | Msa0473080:intron | 25.0% |
! | ATTATCTTATACCAAGAGTT+AGG | - | chr3_3:75550005-75550024 | Msa0473080:CDS | 25.0% |
! | TTGTTACAATTGCTTCAAAA+TGG | + | chr3_3:75550225-75550244 | None:intergenic | 25.0% |
! | GTATATTGAAACATTGAACA+AGG | + | chr3_3:75550404-75550423 | None:intergenic | 25.0% |
! | AAGCCTTAATATGCATAAAA+AGG | - | chr3_3:75550987-75551006 | Msa0473080:intron | 25.0% |
!! | GTACCTTTTTATGCATATTA+AGG | + | chr3_3:75550993-75551012 | None:intergenic | 25.0% |
!! | TGAATAATTTTCAAAGGTGA+GGG | + | chr3_3:75551050-75551069 | None:intergenic | 25.0% |
! | ACTATTGAATAGTTTCCAAT+TGG | - | chr3_3:75551075-75551094 | Msa0473080:intron | 25.0% |
! | CTATTGAATAGTTTCCAATT+GGG | - | chr3_3:75551076-75551095 | Msa0473080:intron | 25.0% |
! | TATTGAATAGTTTCCAATTG+GGG | - | chr3_3:75551077-75551096 | Msa0473080:intron | 25.0% |
! | AGCTGATAGTAAATATTAGA+TGG | - | chr3_3:75551138-75551157 | Msa0473080:intron | 25.0% |
! | AAATTTGCATGCATACAATA+AGG | - | chr3_3:75551289-75551308 | Msa0473080:intron | 25.0% |
! | AACATATGAAAACTGTACTT+AGG | + | chr3_3:75551357-75551376 | None:intergenic | 25.0% |
!! | TACAGTTTTCATATGTTTGT+TGG | - | chr3_3:75551360-75551379 | Msa0473080:intron | 25.0% |
!! | GTTTGTTGGACTATTTATAT+TGG | - | chr3_3:75551374-75551393 | Msa0473080:intron | 25.0% |
! | TGTCCTATTAATTGTGAATT+AGG | - | chr3_3:75551417-75551436 | Msa0473080:intron | 25.0% |
! | AGTCCTAATTCACAATTAAT+AGG | + | chr3_3:75551423-75551442 | None:intergenic | 25.0% |
!! | TAACTTTCATTTTCTTGTCA+TGG | - | chr3_3:75551859-75551878 | Msa0473080:intron | 25.0% |
!!! | AGTTTCCAAGTAACTTTTTT+CGG | - | chr3_3:75552139-75552158 | Msa0473080:CDS | 25.0% |
! | ATTACTTTAACCATCATTCT+TGG | + | chr3_3:75552768-75552787 | None:intergenic | 25.0% |
! | TAAGCAATAACTATATCATC+AGG | + | chr3_3:75552833-75552852 | None:intergenic | 25.0% |
! | ATTTCTAAATTTCTCTCCTA+AGG | + | chr3_3:75552991-75553010 | None:intergenic | 25.0% |
! | GTCTTTGAATTGATATATTC+AGG | - | chr3_3:75553203-75553222 | Msa0473080:CDS | 25.0% |
AGAAACTCAAACAAGCAATT+AGG | - | chr3_3:75545140-75545159 | Msa0473080:three_prime_UTR | 30.0% | |
GAAACTCAAACAAGCAATTA+GGG | - | chr3_3:75545141-75545160 | Msa0473080:three_prime_UTR | 30.0% | |
!! | GGCTTTAGATTATTATACTC+AGG | - | chr3_3:75545432-75545451 | Msa0473080:three_prime_UTR | 30.0% |
TGAAATATAGGCATTACGAA+AGG | - | chr3_3:75545545-75545564 | Msa0473080:CDS | 30.0% | |
TCAATTTCACCAACTTCAAA+AGG | + | chr3_3:75545573-75545592 | None:intergenic | 30.0% | |
AGTGATTATGAATGTGGTTA+AGG | + | chr3_3:75545675-75545694 | None:intergenic | 30.0% | |
CACACATACACATGAATAAA+TGG | + | chr3_3:75545736-75545755 | None:intergenic | 30.0% | |
TACTACTATATTTGTGCTCT+TGG | + | chr3_3:75546454-75546473 | None:intergenic | 30.0% | |
!! | GTGTTTCACTTTTGAATTCT+GGG | - | chr3_3:75546632-75546651 | Msa0473080:CDS | 30.0% |
GATTGTGGACATATATCTTA+TGG | + | chr3_3:75546695-75546714 | None:intergenic | 30.0% | |
GCATGATTAAGAAATGATTG+TGG | + | chr3_3:75546710-75546729 | None:intergenic | 30.0% | |
!!! | TGAAGTACATTTCTGGTTTT+TGG | + | chr3_3:75546732-75546751 | None:intergenic | 30.0% |
CTAGAAGATGAATGAAACTA+AGG | - | chr3_3:75546939-75546958 | Msa0473080:intron | 30.0% | |
TAAGCCACATGTTTAAACAA+AGG | + | chr3_3:75547103-75547122 | None:intergenic | 30.0% | |
!! | GACTTTTTGAAGGCTTTTTA+GGG | + | chr3_3:75547154-75547173 | None:intergenic | 30.0% |
!! | TGACTTTTTGAAGGCTTTTT+AGG | + | chr3_3:75547155-75547174 | None:intergenic | 30.0% |
GGAATGAGAAGAATAAAGTA+AGG | + | chr3_3:75547197-75547216 | None:intergenic | 30.0% | |
TACTTTATTCTTCTCATTCC+TGG | - | chr3_3:75547197-75547216 | Msa0473080:intron | 30.0% | |
TTTGATGTGAATTAGTACTG+AGG | + | chr3_3:75547311-75547330 | None:intergenic | 30.0% | |
ACCATAGTATAGAATGCATA+CGG | + | chr3_3:75547490-75547509 | None:intergenic | 30.0% | |
CTTATTATCTCAAAAAGGAG+AGG | + | chr3_3:75547553-75547572 | None:intergenic | 30.0% | |
! | TTGTTTCTTACCATAGCATA+TGG | + | chr3_3:75547706-75547725 | None:intergenic | 30.0% |
! | TTTTACAATCTCGCAAGTTT+AGG | - | chr3_3:75547812-75547831 | Msa0473080:intron | 30.0% |
TTTACAATCTCGCAAGTTTA+GGG | - | chr3_3:75547813-75547832 | Msa0473080:intron | 30.0% | |
!!! | TTCAGCATTTTTTTATTGCC+TGG | - | chr3_3:75547889-75547908 | Msa0473080:intron | 30.0% |
ACTATTAAGTACAGTTCCAA+GGG | + | chr3_3:75547948-75547967 | None:intergenic | 30.0% | |
AACTATTAAGTACAGTTCCA+AGG | + | chr3_3:75547949-75547968 | None:intergenic | 30.0% | |
! | CTACAAGAGTTTGCTTATAT+TGG | - | chr3_3:75548031-75548050 | Msa0473080:CDS | 30.0% |
AAGAACGTAATTATCTTCTG+TGG | + | chr3_3:75548327-75548346 | None:intergenic | 30.0% | |
AATGATTGTGAGCAAAAGAT+TGG | - | chr3_3:75548398-75548417 | Msa0473080:intron | 30.0% | |
GAACATAAACATGAATGTCA+AGG | - | chr3_3:75548431-75548450 | Msa0473080:intron | 30.0% | |
! | TTTTTGTCAAAGAACTCATC+TGG | - | chr3_3:75548515-75548534 | Msa0473080:intron | 30.0% |
GTTATCTGATTATAGGTATC+TGG | - | chr3_3:75548610-75548629 | Msa0473080:intron | 30.0% | |
TGATATAGAGATTCCATTGA+TGG | + | chr3_3:75548775-75548794 | None:intergenic | 30.0% | |
!!! | TTCCTTTGTTTTTTTGGGTA+TGG | - | chr3_3:75548818-75548837 | Msa0473080:intron | 30.0% |
ATCCATACCCAAAAAAACAA+AGG | + | chr3_3:75548823-75548842 | None:intergenic | 30.0% | |
TGACAAAACAAGATGAAACT+TGG | + | chr3_3:75548998-75549017 | None:intergenic | 30.0% | |
!!! | TCATCTTGTTTTGTCAATAC+AGG | - | chr3_3:75549002-75549021 | Msa0473080:intron | 30.0% |
TTAAAATCAATAGACGCTCA+TGG | - | chr3_3:75549075-75549094 | Msa0473080:CDS | 30.0% | |
AAATGTACACTGGAATGAAA+TGG | + | chr3_3:75549126-75549145 | None:intergenic | 30.0% | |
TTTAACTAGTAATGTGGAAC+AGG | - | chr3_3:75549143-75549162 | Msa0473080:CDS | 30.0% | |
CTGCACATATACTTATCAAT+TGG | - | chr3_3:75549177-75549196 | Msa0473080:intron | 30.0% | |
AATTTAGACATTATTGGCGA+TGG | - | chr3_3:75549277-75549296 | Msa0473080:intron | 30.0% | |
!!! | GCGATGGCAATTTTTTTTTT+GGG | - | chr3_3:75549293-75549312 | Msa0473080:intron | 30.0% |
! | CTAGGAGATATAATGGAATA+TGG | + | chr3_3:75549341-75549360 | None:intergenic | 30.0% |
CATATTCCATTATATCTCCT+AGG | - | chr3_3:75549339-75549358 | Msa0473080:intron | 30.0% | |
GGCAAAGCTATTTATAAAGT+TGG | - | chr3_3:75549370-75549389 | Msa0473080:intron | 30.0% | |
AATATGCATGAACATTTGGT+TGG | + | chr3_3:75549417-75549436 | None:intergenic | 30.0% | |
CTTTATCAGATCAAGCTTTA+GGG | + | chr3_3:75549640-75549659 | None:intergenic | 30.0% | |
TCTTTATCAGATCAAGCTTT+AGG | + | chr3_3:75549641-75549660 | None:intergenic | 30.0% | |
! | ATTTCAACAGAAATTTTGCC+AGG | + | chr3_3:75549736-75549755 | None:intergenic | 30.0% |
GTCAAGAAACCAATTTCAAA+AGG | - | chr3_3:75549834-75549853 | Msa0473080:CDS | 30.0% | |
!!! | CACTCTTAACCTTTTGAAAT+TGG | + | chr3_3:75549846-75549865 | None:intergenic | 30.0% |
AAAGGTTAAGAGTGAAAAGA+AGG | - | chr3_3:75549852-75549871 | Msa0473080:CDS | 30.0% | |
! | AGTTTTCCTATGGCTAATAA+TGG | - | chr3_3:75549885-75549904 | Msa0473080:intron | 30.0% |
! | TTTCCTCTAATTTTATGTGG+GGG | + | chr3_3:75550123-75550142 | None:intergenic | 30.0% |
! | CTTTCCTCTAATTTTATGTG+GGG | + | chr3_3:75550124-75550143 | None:intergenic | 30.0% |
! | CCTTTCCTCTAATTTTATGT+GGG | + | chr3_3:75550125-75550144 | None:intergenic | 30.0% |
! | TCCTTTCCTCTAATTTTATG+TGG | + | chr3_3:75550126-75550145 | None:intergenic | 30.0% |
AATGGTTATATGCCAAGATT+GGG | + | chr3_3:75550207-75550226 | None:intergenic | 30.0% | |
AAATGGTTATATGCCAAGAT+TGG | + | chr3_3:75550208-75550227 | None:intergenic | 30.0% | |
! | CAACTTTTTGTTGAGCTTTT+AGG | - | chr3_3:75550242-75550261 | Msa0473080:CDS | 30.0% |
!! | TTGAGCTTTTAGGAAGTTAT+AGG | - | chr3_3:75550252-75550271 | Msa0473080:CDS | 30.0% |
AATTGTATTTCCACGACATA+TGG | - | chr3_3:75550275-75550294 | Msa0473080:CDS | 30.0% | |
TTATGTTGAGTGGAAATGAT+CGG | + | chr3_3:75550304-75550323 | None:intergenic | 30.0% | |
! | TGATAAAGTAAGCTACTTTG+AGG | - | chr3_3:75550651-75550670 | Msa0473080:intron | 30.0% |
! | GATAAAGTAAGCTACTTTGA+GGG | - | chr3_3:75550652-75550671 | Msa0473080:intron | 30.0% |
! | ACATATGTTGCTTAGCATTT+AGG | - | chr3_3:75550758-75550777 | Msa0473080:intron | 30.0% |
GGAGAAAATAGTTCAAACAT+AGG | + | chr3_3:75550807-75550826 | None:intergenic | 30.0% | |
! | CTGAATAATTTTCAAAGGTG+AGG | + | chr3_3:75551051-75551070 | None:intergenic | 30.0% |
ATTGAATAGTTTCCAATTGG+GGG | - | chr3_3:75551078-75551097 | Msa0473080:intron | 30.0% | |
ACAGTTTACAGACTGAAATA+TGG | - | chr3_3:75551176-75551195 | Msa0473080:intron | 30.0% | |
ATACAATAAGGTTATTGCAG+AGG | - | chr3_3:75551301-75551320 | Msa0473080:intron | 30.0% | |
TATGAAAACTGTACTTAGGA+TGG | + | chr3_3:75551353-75551372 | None:intergenic | 30.0% | |
TTCTCCTACAATATCAAACT+TGG | - | chr3_3:75551521-75551540 | Msa0473080:intron | 30.0% | |
GACAAGATTCATGAAATGTT+TGG | - | chr3_3:75551559-75551578 | Msa0473080:intron | 30.0% | |
! | AAATCTTTTAACCAAGCTTC+AGG | + | chr3_3:75551619-75551638 | None:intergenic | 30.0% |
AGTGGGAGAATTACAATTAT+CGG | - | chr3_3:75551927-75551946 | Msa0473080:intron | 30.0% | |
ACAAACCTACTATCTTAGTT+TGG | - | chr3_3:75551991-75552010 | Msa0473080:intron | 30.0% | |
AAATCATGGTGCATTTACAA+TGG | - | chr3_3:75552227-75552246 | Msa0473080:intron | 30.0% | |
!!! | TCATAGGAATGTTTTTAGCT+TGG | - | chr3_3:75552573-75552592 | Msa0473080:intron | 30.0% |
!!! | CATAGGAATGTTTTTAGCTT+GGG | - | chr3_3:75552574-75552593 | Msa0473080:intron | 30.0% |
! | ACAAACAAAAGCTTGCTTAT+GGG | + | chr3_3:75552679-75552698 | None:intergenic | 30.0% |
! | AACAAACAAAAGCTTGCTTA+TGG | + | chr3_3:75552680-75552699 | None:intergenic | 30.0% |
! | GATTGATAACAAGACCATAT+GGG | + | chr3_3:75552733-75552752 | None:intergenic | 30.0% |
! | AGATTGATAACAAGACCATA+TGG | + | chr3_3:75552734-75552753 | None:intergenic | 30.0% |
!! | GCTATTTTCTCACGTTATTA+TGG | - | chr3_3:75552929-75552948 | Msa0473080:CDS | 30.0% |
TTGGTATGAAAGATCTACAA+TGG | - | chr3_3:75553104-75553123 | Msa0473080:CDS | 30.0% | |
TTGTTGTCGATGTAGTTAAA+TGG | - | chr3_3:75553265-75553284 | Msa0473080:intron | 30.0% | |
TGTTGTCGATGTAGTTAAAT+GGG | - | chr3_3:75553266-75553285 | Msa0473080:intron | 30.0% | |
AGTGTGTGACATGTAAATAT+CGG | + | chr3_3:75553368-75553387 | None:intergenic | 30.0% | |
ATATTTACATGTCACACACT+TGG | - | chr3_3:75553368-75553387 | Msa0473080:CDS | 30.0% | |
TTATGAAAGAAAAGATGTCC+TGG | + | chr3_3:75553458-75553477 | None:intergenic | 30.0% | |
AAGAGAGGGAAAGAAAACAA+AGG | - | chr3_3:75545069-75545088 | Msa0473080:three_prime_UTR | 35.0% | |
! | ATTGCTTGTTTGAGTTTCTC+TGG | + | chr3_3:75545139-75545158 | None:intergenic | 35.0% |
GATTTAGTTGAAATGGGAGA+AGG | + | chr3_3:75545254-75545273 | None:intergenic | 35.0% | |
! | CTCTAATGCTGATTATGTCA+AGG | - | chr3_3:75545411-75545430 | Msa0473080:three_prime_UTR | 35.0% |
! | AAGATTCATTTTCTGCAGCA+GGG | + | chr3_3:75545763-75545782 | None:intergenic | 35.0% |
! | AAAGATTCATTTTCTGCAGC+AGG | + | chr3_3:75545764-75545783 | None:intergenic | 35.0% |
GATATGTCCAAGCTATTCAA+AGG | - | chr3_3:75545821-75545840 | Msa0473080:intron | 35.0% | |
AAACACACCTTTGAATAGCT+TGG | + | chr3_3:75545831-75545850 | None:intergenic | 35.0% | |
TCGACAGAAACTTGATCATT+CGG | + | chr3_3:75546158-75546177 | None:intergenic | 35.0% | |
GCATTGAAGTTTGATGTAGT+TGG | - | chr3_3:75546204-75546223 | Msa0473080:intron | 35.0% | |
AACTTCATTATTCTGGCATC+AGG | - | chr3_3:75546284-75546303 | Msa0473080:intron | 35.0% | |
AGGAAAGGCAAATATTGCAT+TGG | - | chr3_3:75546320-75546339 | Msa0473080:intron | 35.0% | |
GGAAAGGCAAATATTGCATT+GGG | - | chr3_3:75546321-75546340 | Msa0473080:intron | 35.0% | |
CTATATTTGTGCTCTTGGAT+TGG | + | chr3_3:75546449-75546468 | None:intergenic | 35.0% | |
!! | AATTTGCTAGCTGCTTAACA+AGG | + | chr3_3:75546526-75546545 | None:intergenic | 35.0% |
TTGTTAAGCAGCTAGCAAAT+TGG | - | chr3_3:75546525-75546544 | Msa0473080:intron | 35.0% | |
!! | AAATTGGTTAAGGCTTGTTG+AGG | - | chr3_3:75546541-75546560 | Msa0473080:intron | 35.0% |
!! | CGTGTTTCACTTTTGAATTC+TGG | - | chr3_3:75546631-75546650 | Msa0473080:CDS | 35.0% |
TTGAATTCTGGGTGATTCTT+TGG | - | chr3_3:75546643-75546662 | Msa0473080:intron | 35.0% | |
TGAATTCTGGGTGATTCTTT+GGG | - | chr3_3:75546644-75546663 | Msa0473080:intron | 35.0% | |
CAAGGATTGAAGTACATTTC+TGG | + | chr3_3:75546739-75546758 | None:intergenic | 35.0% | |
!! | AAAGGTATCCAAGACTGAAT+AGG | + | chr3_3:75546873-75546892 | None:intergenic | 35.0% |
!! | GCTTAATTTTGGGGAACTAA+AGG | + | chr3_3:75546891-75546910 | None:intergenic | 35.0% |
AATTATGCACCTTATGGACT+AGG | - | chr3_3:75547017-75547036 | Msa0473080:intron | 35.0% | |
! | ATTATGCACCTTATGGACTA+GGG | - | chr3_3:75547018-75547037 | Msa0473080:intron | 35.0% |
ACATGTTTAAACAAAGGCAG+GGG | + | chr3_3:75547097-75547116 | None:intergenic | 35.0% | |
CACATGTTTAAACAAAGGCA+GGG | + | chr3_3:75547098-75547117 | None:intergenic | 35.0% | |
!! | TTTTGAAGGCTTTTTAGGGA+TGG | + | chr3_3:75547150-75547169 | None:intergenic | 35.0% |
! | GTATGCAAGTGACTTTTTGA+AGG | + | chr3_3:75547164-75547183 | None:intergenic | 35.0% |
TGCTAGAAAACTTCAATCAG+AGG | - | chr3_3:75547365-75547384 | Msa0473080:intron | 35.0% | |
TCCGTATGCATTCTATACTA+TGG | - | chr3_3:75547486-75547505 | Msa0473080:intron | 35.0% | |
!! | ACACTTTGCAGCTTTATTTG+AGG | + | chr3_3:75547607-75547626 | None:intergenic | 35.0% |
! | GCTTCAATTGAAAGTACAAG+AGG | - | chr3_3:75547844-75547863 | Msa0473080:intron | 35.0% |
TGGCGATTATGTAAGCAAAT+AGG | - | chr3_3:75548051-75548070 | Msa0473080:CDS | 35.0% | |
ACAGTCTTCTTGAGATGAAT+GGG | - | chr3_3:75548115-75548134 | Msa0473080:intron | 35.0% | |
! | GGTATTGAACACGATATACA+AGG | + | chr3_3:75548248-75548267 | None:intergenic | 35.0% |
GCATATTCAGCAAGATTGTT+GGG | + | chr3_3:75548359-75548378 | None:intergenic | 35.0% | |
AGCATATTCAGCAAGATTGT+TGG | + | chr3_3:75548360-75548379 | None:intergenic | 35.0% | |
! | TGGAGATATCACAAGTTTTG+TGG | - | chr3_3:75548535-75548554 | Msa0473080:intron | 35.0% |
!! | CACAAGTTTTGTGGAAAAGT+TGG | - | chr3_3:75548544-75548563 | Msa0473080:intron | 35.0% |
! | AGCTTTTATTCTTACTGTGC+AGG | - | chr3_3:75548641-75548660 | Msa0473080:intron | 35.0% |
CAATGGAATCTCTATATCAC+AGG | - | chr3_3:75548776-75548795 | Msa0473080:intron | 35.0% | |
! | CTCTATATCACAGGTTGTTT+TGG | - | chr3_3:75548785-75548804 | Msa0473080:intron | 35.0% |
!!! | TCTTGTTTTGTCAATACAGG+TGG | - | chr3_3:75549005-75549024 | Msa0473080:intron | 35.0% |
!!! | GGCGATGGCAATTTTTTTTT+TGG | - | chr3_3:75549292-75549311 | Msa0473080:intron | 35.0% |
!! | GTCCACAGGTAACTTATTTT+TGG | - | chr3_3:75549509-75549528 | Msa0473080:intron | 35.0% |
CTCCAAAAATAAGTTACCTG+TGG | + | chr3_3:75549514-75549533 | None:intergenic | 35.0% | |
GGTTCATATTCTTGACAACA+TGG | - | chr3_3:75549790-75549809 | Msa0473080:CDS | 35.0% | |
! | ATCATGAGTGAGTTTTCCTA+TGG | - | chr3_3:75549875-75549894 | Msa0473080:intron | 35.0% |
TCAATGCCATTATTAGCCAT+AGG | + | chr3_3:75549894-75549913 | None:intergenic | 35.0% | |
TATGGCTAATAATGGCATTG+AGG | - | chr3_3:75549893-75549912 | Msa0473080:intron | 35.0% | |
! | ATGGCTAATAATGGCATTGA+GGG | - | chr3_3:75549894-75549913 | Msa0473080:intron | 35.0% |
!! | AATCTTCTATTAGTGGGCTT+GGG | + | chr3_3:75550060-75550079 | None:intergenic | 35.0% |
! | GAAGACTACATTTTCTCTAC+GGG | + | chr3_3:75550101-75550120 | None:intergenic | 35.0% |
! | GGAAGACTACATTTTCTCTA+CGG | + | chr3_3:75550102-75550121 | None:intergenic | 35.0% |
CCCACATAAAATTAGAGGAA+AGG | - | chr3_3:75550122-75550141 | Msa0473080:CDS | 35.0% | |
ATGGTTATATGCCAAGATTG+GGG | + | chr3_3:75550206-75550225 | None:intergenic | 35.0% | |
! | CAGATAAAGTTCTGTTTTGC+AGG | - | chr3_3:75550423-75550442 | Msa0473080:intron | 35.0% |
! | TAAAGTTCTGTTTTGCAGGT+TGG | - | chr3_3:75550427-75550446 | Msa0473080:intron | 35.0% |
! | AAAGTTCTGTTTTGCAGGTT+GGG | - | chr3_3:75550428-75550447 | Msa0473080:intron | 35.0% |
GCATTTCATTGTCAATGTAC+TGG | - | chr3_3:75550496-75550515 | Msa0473080:intron | 35.0% | |
!! | TCACACAATGAAAAGCATTG+AGG | + | chr3_3:75550552-75550571 | None:intergenic | 35.0% |
TTACTTTATCAGCAACAGCT+AGG | + | chr3_3:75550642-75550661 | None:intergenic | 35.0% | |
ATATGTAGAGTTGAGTGACT+TGG | - | chr3_3:75550720-75550739 | Msa0473080:intron | 35.0% | |
TTGCTTAGCATTTAGGAGTT+GGG | - | chr3_3:75550765-75550784 | Msa0473080:intron | 35.0% | |
!!! | TATGAACAGAAGCGTCATTT+TGG | + | chr3_3:75550898-75550917 | None:intergenic | 35.0% |
AAGGTACACACTGTTCAATT+TGG | - | chr3_3:75551006-75551025 | Msa0473080:intron | 35.0% | |
TGAGGGAAAAGCTGTTATTA+GGG | + | chr3_3:75551033-75551052 | None:intergenic | 35.0% | |
TATTTACTATCAGCTCATGC+AGG | + | chr3_3:75551133-75551152 | None:intergenic | 35.0% | |
GACTGAAATATGGAAATGAC+AGG | - | chr3_3:75551186-75551205 | Msa0473080:intron | 35.0% | |
CATGCCAAGTTTGATATTGT+AGG | + | chr3_3:75551528-75551547 | None:intergenic | 35.0% | |
CTACTTACACTATCAAGTCT+TGG | + | chr3_3:75551740-75551759 | None:intergenic | 35.0% | |
TCCCACTAAACAAAAAGCTT+GGG | + | chr3_3:75551914-75551933 | None:intergenic | 35.0% | |
! | TCATTGTAAAGCATCCATTC+AGG | - | chr3_3:75551954-75551973 | Msa0473080:intron | 35.0% |
GTATCTCTTTCTGAATAGCT+AGG | - | chr3_3:75552109-75552128 | Msa0473080:CDS | 35.0% | |
! | TTTTCATTTCCCTCTCCATA+TGG | + | chr3_3:75552373-75552392 | None:intergenic | 35.0% |
TGGAGAGGGAAATGAAAAAA+TGG | - | chr3_3:75552375-75552394 | Msa0473080:intron | 35.0% | |
CTAATGAACACATAAACCTG+TGG | + | chr3_3:75552447-75552466 | None:intergenic | 35.0% | |
CACAGGTTTATGTGTTCATT+AGG | - | chr3_3:75552445-75552464 | Msa0473080:intron | 35.0% | |
AGGTTTATGTGTTCATTAGG+AGG | - | chr3_3:75552448-75552467 | Msa0473080:intron | 35.0% | |
AAAGACCTCTCATTTCTCAA+TGG | + | chr3_3:75552518-75552537 | None:intergenic | 35.0% | |
TTTAATGCACATAGCCATAC+AGG | - | chr3_3:75552536-75552555 | Msa0473080:intron | 35.0% | |
! | AATTAAGTCTTGTAGAGCCA+TGG | - | chr3_3:75552648-75552667 | Msa0473080:intron | 35.0% |
ATCAGACTTTCCAAGAATGA+TGG | - | chr3_3:75552755-75552774 | Msa0473080:CDS | 35.0% | |
!!! | CTTTTTTCCGTTGCAGATTT+TGG | - | chr3_3:75552793-75552812 | Msa0473080:intron | 35.0% |
ATCTTCTCCAAAATCTGCAA+CGG | + | chr3_3:75552803-75552822 | None:intergenic | 35.0% | |
TATTGTCACCCAAGTAAAGT+TGG | + | chr3_3:75552880-75552899 | None:intergenic | 35.0% | |
TTCCTTATCTTCAGTACCTT+AGG | - | chr3_3:75552972-75552991 | Msa0473080:CDS | 35.0% | |
!! | TTGCTGGAAAAGCATTTGAT+TGG | + | chr3_3:75553029-75553048 | None:intergenic | 35.0% |
! | AAATGCTTTTCCAGCAAAGT+GGG | - | chr3_3:75553032-75553051 | Msa0473080:intron | 35.0% |
TCAATCACAGCTTAAATGAC+AGG | - | chr3_3:75553077-75553096 | Msa0473080:intron | 35.0% | |
AGCTTAAATGACAGGTCATT+TGG | - | chr3_3:75553085-75553104 | Msa0473080:intron | 35.0% | |
! | CGAGTAATTTTTCTTGAGGT+TGG | + | chr3_3:75553131-75553150 | None:intergenic | 35.0% |
! | GCATCGAGTAATTTTTCTTG+AGG | + | chr3_3:75553135-75553154 | None:intergenic | 35.0% |
ATAACGTAGTCTCGTGAATA+TGG | - | chr3_3:75553474-75553493 | Msa0473080:five_prime_UTR | 35.0% | |
TAACGTAGTCTCGTGAATAT+GGG | - | chr3_3:75553475-75553494 | Msa0473080:five_prime_UTR | 35.0% | |
GCAAAGGAAGAAGAAAGAGA+GGG | - | chr3_3:75545055-75545074 | Msa0473080:three_prime_UTR | 40.0% | |
GGGAAAGAAAACAAAGGAAG+TGG | - | chr3_3:75545075-75545094 | Msa0473080:three_prime_UTR | 40.0% | |
AAACAAAGGAAGTGGTGTAG+AGG | - | chr3_3:75545083-75545102 | Msa0473080:three_prime_UTR | 40.0% | |
AAGAAGATGGAGACTCTGAA+AGG | - | chr3_3:75545106-75545125 | Msa0473080:three_prime_UTR | 40.0% | |
TAGTACGTACCTGGTGAAAA+GGG | + | chr3_3:75545231-75545250 | None:intergenic | 40.0% | |
GCGTTGAAATATAAGCAGCT+TGG | - | chr3_3:75545376-75545395 | Msa0473080:three_prime_UTR | 40.0% | |
! | TTCTGTCGAGAGACAGATTT+TGG | - | chr3_3:75546169-75546188 | Msa0473080:intron | 40.0% |
! | TCTGTCGAGAGACAGATTTT+GGG | - | chr3_3:75546170-75546189 | Msa0473080:intron | 40.0% |
!! | AAGAGTGTCGAATCATCAAC+AGG | - | chr3_3:75546381-75546400 | Msa0473080:intron | 40.0% |
AGCAGCTAGCAAATTGGTTA+AGG | - | chr3_3:75546531-75546550 | Msa0473080:intron | 40.0% | |
GATGAGCCTATAGCAATAGT+AGG | - | chr3_3:75546790-75546809 | Msa0473080:intron | 40.0% | |
!!! | GGTGTTTTGGCTGAATTTCT+TGG | + | chr3_3:75546979-75546998 | None:intergenic | 40.0% |
!!! | CTATAAGGAAGAGGGTGTTT+TGG | + | chr3_3:75546992-75547011 | None:intergenic | 40.0% |
CATGTTTAAACAAAGGCAGG+GGG | + | chr3_3:75547096-75547115 | None:intergenic | 40.0% | |
CCACATGTTTAAACAAAGGC+AGG | + | chr3_3:75547099-75547118 | None:intergenic | 40.0% | |
! | CCTGCCTTTGTTTAAACATG+TGG | - | chr3_3:75547096-75547115 | Msa0473080:intron | 40.0% |
AGTCACTTGCATACATCAAG+AGG | - | chr3_3:75547170-75547189 | Msa0473080:intron | 40.0% | |
GTTTGCACACATTTCATTCC+AGG | + | chr3_3:75547218-75547237 | None:intergenic | 40.0% | |
GATTGTATGCTAGACGAGTT+AGG | - | chr3_3:75547244-75547263 | Msa0473080:CDS | 40.0% | |
!! | AGTTCTGAGAGAATGGAGAA+GGG | + | chr3_3:75547285-75547304 | None:intergenic | 40.0% |
!! | AAGTTCTGAGAGAATGGAGA+AGG | + | chr3_3:75547286-75547305 | None:intergenic | 40.0% |
!! | GAGGTAAAGTTCTGAGAGAA+TGG | + | chr3_3:75547292-75547311 | None:intergenic | 40.0% |
CAAACAAAATGTGACCAACG+AGG | + | chr3_3:75547427-75547446 | None:intergenic | 40.0% | |
ATAGGATTGAATAGCGGTCA+GGG | + | chr3_3:75547450-75547469 | None:intergenic | 40.0% | |
AATAGGATTGAATAGCGGTC+AGG | + | chr3_3:75547451-75547470 | None:intergenic | 40.0% | |
TGCTGAAGAACCATATGCTA+TGG | - | chr3_3:75547693-75547712 | Msa0473080:intron | 40.0% | |
! | AGTTCTCTGGAAAGAAAACC+AGG | + | chr3_3:75547910-75547929 | None:intergenic | 40.0% |
! | TGGTTTTCTTTCCAGAGAAC+TGG | - | chr3_3:75547909-75547928 | Msa0473080:CDS | 40.0% |
ATTAAGTACAGTTCCAAGGG+AGG | + | chr3_3:75547945-75547964 | None:intergenic | 40.0% | |
CATTCATCTCAAGAAGACTG+TGG | + | chr3_3:75548116-75548135 | None:intergenic | 40.0% | |
CACAGTCTTCTTGAGATGAA+TGG | - | chr3_3:75548114-75548133 | Msa0473080:intron | 40.0% | |
GTAGGTCGTTCAAGCAATAA+TGG | + | chr3_3:75548211-75548230 | None:intergenic | 40.0% | |
ATACAAGGAACTCTATCAGC+AGG | + | chr3_3:75548233-75548252 | None:intergenic | 40.0% | |
AATGCCAAATAAAGGCAGGT+GGG | - | chr3_3:75548285-75548304 | Msa0473080:intron | 40.0% | |
! | ATGAATGTCAAGGAGTGCAT+TGG | - | chr3_3:75548441-75548460 | Msa0473080:intron | 40.0% |
! | ACTGCCTTCTGACATAGTTT+TGG | - | chr3_3:75548472-75548491 | Msa0473080:intron | 40.0% |
CTGCTACACAAGGTTTATGA+TGG | + | chr3_3:75548889-75548908 | None:intergenic | 40.0% | |
AATATGGCTCAGAATCACGA+AGG | + | chr3_3:75549325-75549344 | None:intergenic | 40.0% | |
CTCTGACCTAGGAGATATAA+TGG | + | chr3_3:75549348-75549367 | None:intergenic | 40.0% | |
TTATATCTCCTAGGTCAGAG+TGG | - | chr3_3:75549348-75549367 | Msa0473080:intron | 40.0% | |
TATATCTCCTAGGTCAGAGT+GGG | - | chr3_3:75549349-75549368 | Msa0473080:intron | 40.0% | |
GAACATTTGGTTGGCAAGAA+TGG | + | chr3_3:75549408-75549427 | None:intergenic | 40.0% | |
TGTCAGCTGGAATTGTCTTA+CGG | - | chr3_3:75549487-75549506 | Msa0473080:CDS | 40.0% | |
! | CTTTAGGGATGCTTGATTAC+TGG | + | chr3_3:75549625-75549644 | None:intergenic | 40.0% |
GCCTATATAAAAGAGTGACC+TGG | - | chr3_3:75549715-75549734 | Msa0473080:intron | 40.0% | |
! | GCCAGGTCACTCTTTTATAT+AGG | + | chr3_3:75549719-75549738 | None:intergenic | 40.0% |
TCTTGACAACATGGCTGAAA+AGG | - | chr3_3:75549799-75549818 | Msa0473080:CDS | 40.0% | |
! | TGGCTAATAATGGCATTGAG+GGG | - | chr3_3:75549895-75549914 | Msa0473080:intron | 40.0% |
!!! | AGGGGTATTTTTGCTACGAT+AGG | - | chr3_3:75549913-75549932 | Msa0473080:intron | 40.0% |
CTTATACCAAGAGTTAGGTC+AGG | - | chr3_3:75550010-75550029 | Msa0473080:CDS | 40.0% | |
ACAATACCTGACCTAACTCT+TGG | + | chr3_3:75550019-75550038 | None:intergenic | 40.0% | |
!! | CAATCTTCTATTAGTGGGCT+TGG | + | chr3_3:75550061-75550080 | None:intergenic | 40.0% |
CGCAGCAATCTTCTATTAGT+GGG | + | chr3_3:75550066-75550085 | None:intergenic | 40.0% | |
TCGCAGCAATCTTCTATTAG+TGG | + | chr3_3:75550067-75550086 | None:intergenic | 40.0% | |
CTTCCCCCACATAAAATTAG+AGG | - | chr3_3:75550117-75550136 | Msa0473080:CDS | 40.0% | |
TGTGTGAACCCAAATTGTTC+TGG | - | chr3_3:75550565-75550584 | Msa0473080:intron | 40.0% | |
GTTGCTTAGCATTTAGGAGT+TGG | - | chr3_3:75550764-75550783 | Msa0473080:intron | 40.0% | |
TGCATTTCAAACAGACTCCA+GGG | + | chr3_3:75550925-75550944 | None:intergenic | 40.0% | |
GTGAGGGAAAAGCTGTTATT+AGG | + | chr3_3:75551034-75551053 | None:intergenic | 40.0% | |
! | AGATCTCAAAGCGTCTGAAA+TGG | + | chr3_3:75551252-75551271 | None:intergenic | 40.0% |
! | AGGATGGAGAACTTTTGTGA+AGG | + | chr3_3:75551337-75551356 | None:intergenic | 40.0% |
!! | AAAAGCATTCTCCTGAAGCT+TGG | - | chr3_3:75551605-75551624 | Msa0473080:intron | 40.0% |
ATCCAAACACAGTCAGAGAT+AGG | - | chr3_3:75551659-75551678 | Msa0473080:intron | 40.0% | |
ATCCTATCTCTGACTGTGTT+TGG | + | chr3_3:75551664-75551683 | None:intergenic | 40.0% | |
TTTGTGCGACCTCAATTGAA+AGG | - | chr3_3:75551787-75551806 | Msa0473080:intron | 40.0% | |
CTAAACAAAAAGCTTGGGCA+AGG | + | chr3_3:75551909-75551928 | None:intergenic | 40.0% | |
!! | TGCCCAAGCTTTTTGTTTAG+TGG | - | chr3_3:75551909-75551928 | Msa0473080:intron | 40.0% |
!! | GCCCAAGCTTTTTGTTTAGT+GGG | - | chr3_3:75551910-75551929 | Msa0473080:intron | 40.0% |
CTCCCACTAAACAAAAAGCT+TGG | + | chr3_3:75551915-75551934 | None:intergenic | 40.0% | |
GGGAGAATTACAATTATCGG+CGG | - | chr3_3:75551930-75551949 | Msa0473080:intron | 40.0% | |
! | ACCTACTATCTTAGTTTGGC+TGG | - | chr3_3:75551995-75552014 | Msa0473080:intron | 40.0% |
ACCAGCCAAACTAAGATAGT+AGG | + | chr3_3:75551999-75552018 | None:intergenic | 40.0% | |
GGGAGTAGAAGTTTGGTTAT+TGG | - | chr3_3:75552069-75552088 | Msa0473080:CDS | 40.0% | |
CACTGCCGAAAAAAGTTACT+TGG | + | chr3_3:75552147-75552166 | None:intergenic | 40.0% | |
!!! | CAAGTAACTTTTTTCGGCAG+TGG | - | chr3_3:75552145-75552164 | Msa0473080:CDS | 40.0% |
TAGCGTTACACTGGAAATCA+TGG | - | chr3_3:75552213-75552232 | Msa0473080:CDS | 40.0% | |
TCACGCTAATTCTCATAGCA+AGG | + | chr3_3:75552256-75552275 | None:intergenic | 40.0% | |
ACCAAGTGCATGTAACCATA+TGG | - | chr3_3:75552278-75552297 | Msa0473080:intron | 40.0% | |
TCCATATGGTTACATGCACT+TGG | + | chr3_3:75552282-75552301 | None:intergenic | 40.0% | |
TGCATGTAACCATATGGAGA+GGG | - | chr3_3:75552284-75552303 | Msa0473080:intron | 40.0% | |
ATTCTCATTGCACTTCTCAG+CGG | + | chr3_3:75552325-75552344 | None:intergenic | 40.0% | |
! | AAATGGCTAGTTGCTGCATT+TGG | - | chr3_3:75552392-75552411 | Msa0473080:intron | 40.0% |
! | AATGGCTAGTTGCTGCATTT+GGG | - | chr3_3:75552393-75552412 | Msa0473080:intron | 40.0% |
AGGAGCTATTATATACGTCC+TGG | - | chr3_3:75552468-75552487 | Msa0473080:intron | 40.0% | |
GGAGCTATTATATACGTCCT+GGG | - | chr3_3:75552469-75552488 | Msa0473080:intron | 40.0% | |
AAGTCACTCAAATTCTACCC+AGG | + | chr3_3:75552489-75552508 | None:intergenic | 40.0% | |
GGTAGAATTTGAGTGACTTG+TGG | - | chr3_3:75552490-75552509 | Msa0473080:intron | 40.0% | |
TAAAATGCTCACGACCTGTA+TGG | + | chr3_3:75552553-75552572 | None:intergenic | 40.0% | |
! | GGTCGTGAGCATTTTATCAT+AGG | - | chr3_3:75552557-75552576 | Msa0473080:intron | 40.0% |
GAGTGAATGCATTTCCCATA+TGG | - | chr3_3:75552716-75552735 | Msa0473080:CDS | 40.0% | |
TTCATCCGTCCAACTTTACT+TGG | - | chr3_3:75552868-75552887 | Msa0473080:intron | 40.0% | |
TCATCCGTCCAACTTTACTT+GGG | - | chr3_3:75552869-75552888 | Msa0473080:intron | 40.0% | |
AATAGTGCTGTCAACAGCAT+TGG | - | chr3_3:75552896-75552915 | Msa0473080:intron | 40.0% | |
TTATGGACTTCATGCAGACT+TGG | - | chr3_3:75552946-75552965 | Msa0473080:CDS | 40.0% | |
!! | CTCCTAAGGTACTGAAGATA+AGG | + | chr3_3:75552977-75552996 | None:intergenic | 40.0% |
!! | GGAAAAGCATTTGATTGGAG+AGG | + | chr3_3:75553024-75553043 | None:intergenic | 40.0% |
! | CAAATGCTTTTCCAGCAAAG+TGG | - | chr3_3:75553031-75553050 | Msa0473080:intron | 40.0% |
AGATTGTCTCAAGATCAGTC+TGG | - | chr3_3:75553305-75553324 | Msa0473080:intron | 40.0% | |
ATCAGTCTGGATGGAATTTG+AGG | - | chr3_3:75553318-75553337 | Msa0473080:CDS | 40.0% | |
GAAAGAAAAGATGTCCTGGT+TGG | + | chr3_3:75553454-75553473 | None:intergenic | 40.0% | |
GGCAAAGGAAGAAGAAAGAG+AGG | - | chr3_3:75545054-75545073 | Msa0473080:three_prime_UTR | 45.0% | |
AGTGGTGTAGAGGAAGAAGA+TGG | - | chr3_3:75545093-75545112 | Msa0473080:three_prime_UTR | 45.0% | |
! | TCATTTCGACCCTTTTCACC+AGG | - | chr3_3:75545219-75545238 | Msa0473080:three_prime_UTR | 45.0% |
GTAGTACGTACCTGGTGAAA+AGG | + | chr3_3:75545232-75545251 | None:intergenic | 45.0% | |
!!! | CGAAAGGCTCCTTTTGAAGT+TGG | - | chr3_3:75545561-75545580 | Msa0473080:CDS | 45.0% |
TTCTTTGCCTAATTGCCACG+TGG | - | chr3_3:75546055-75546074 | Msa0473080:intron | 45.0% | |
TCTTTGCCTAATTGCCACGT+GGG | - | chr3_3:75546056-75546075 | Msa0473080:intron | 45.0% | |
AACTTTCCCACGTGGCAATT+AGG | + | chr3_3:75546065-75546084 | None:intergenic | 45.0% | |
TGCCACGTGGGAAAGTTTAT+TGG | - | chr3_3:75546068-75546087 | Msa0473080:intron | 45.0% | |
GCCACGTGGGAAAGTTTATT+GGG | - | chr3_3:75546069-75546088 | Msa0473080:intron | 45.0% | |
CCACGTGGGAAAGTTTATTG+GGG | - | chr3_3:75546070-75546089 | Msa0473080:intron | 45.0% | |
! | CTGTCGAGAGACAGATTTTG+GGG | - | chr3_3:75546171-75546190 | Msa0473080:intron | 45.0% |
CATTATTCTGGCATCAGGCA+TGG | - | chr3_3:75546289-75546308 | Msa0473080:intron | 45.0% | |
! | AGTGTCGAATCATCAACAGG+AGG | - | chr3_3:75546384-75546403 | Msa0473080:intron | 45.0% |
GTGTCGAATCATCAACAGGA+GGG | - | chr3_3:75546385-75546404 | Msa0473080:intron | 45.0% | |
GGAGAACAGCTTGAGTACTA+CGG | - | chr3_3:75546488-75546507 | Msa0473080:intron | 45.0% | |
GAGAACAGCTTGAGTACTAC+GGG | - | chr3_3:75546489-75546508 | Msa0473080:intron | 45.0% | |
GTAGGTAAATAGGGTTTCCG+AGG | - | chr3_3:75546808-75546827 | Msa0473080:intron | 45.0% | |
!! | TTATGTCGGCTTAGAGCTTG+AGG | - | chr3_3:75546845-75546864 | Msa0473080:intron | 45.0% |
! | TTGAGGTGCCTATTCAGTCT+TGG | - | chr3_3:75546862-75546881 | Msa0473080:intron | 45.0% |
GTTGTTCTCCCTAGTCCATA+AGG | + | chr3_3:75547029-75547048 | None:intergenic | 45.0% | |
! | GGGAGAACAACTCACTGTTT+TGG | - | chr3_3:75547038-75547057 | Msa0473080:intron | 45.0% |
AGAAACAATCGTTGCCTCGT+TGG | - | chr3_3:75547410-75547429 | Msa0473080:intron | 45.0% | |
AAGATGGTACAGTGCGTTTG+TGG | - | chr3_3:75547570-75547589 | Msa0473080:CDS | 45.0% | |
AGTGTCTCCGTACCTGATAA+AGG | - | chr3_3:75547622-75547641 | Msa0473080:CDS | 45.0% | |
TCCGTACCTGATAAAGGAAG+AGG | - | chr3_3:75547628-75547647 | Msa0473080:CDS | 45.0% | |
GCCTCTTCCTTTATCAGGTA+CGG | + | chr3_3:75547632-75547651 | None:intergenic | 45.0% | |
ACCTGATAAAGGAAGAGGCA+TGG | - | chr3_3:75547633-75547652 | Msa0473080:CDS | 45.0% | |
ACCATGCCTCTTCCTTTATC+AGG | + | chr3_3:75547637-75547656 | None:intergenic | 45.0% | |
GAACCTGGTGAAACATCAGA+TGG | + | chr3_3:75547664-75547683 | None:intergenic | 45.0% | |
TGATGTTTCACCAGGTTCGT+TGG | - | chr3_3:75547666-75547685 | Msa0473080:CDS | 45.0% | |
AAGGAACTCTATCAGCAGGT+AGG | + | chr3_3:75548229-75548248 | None:intergenic | 45.0% | |
CTCGCACCAATGCCAAATAA+AGG | - | chr3_3:75548277-75548296 | Msa0473080:intron | 45.0% | |
CACCAATGCCAAATAAAGGC+AGG | - | chr3_3:75548281-75548300 | Msa0473080:intron | 45.0% | |
! | CACCTGCCTTTATTTGGCAT+TGG | + | chr3_3:75548286-75548305 | None:intergenic | 45.0% |
CAATGCCAAATAAAGGCAGG+TGG | - | chr3_3:75548284-75548303 | Msa0473080:intron | 45.0% | |
TTTGCCCACCTGCCTTTATT+TGG | + | chr3_3:75548292-75548311 | None:intergenic | 45.0% | |
CCAGCCAAAACTATGTCAGA+AGG | + | chr3_3:75548479-75548498 | None:intergenic | 45.0% | |
!!! | CCTTCTGACATAGTTTTGGC+TGG | - | chr3_3:75548476-75548495 | Msa0473080:intron | 45.0% |
! | TTAGCACATTTGGGGTTGCA+TGG | - | chr3_3:75549769-75549788 | Msa0473080:CDS | 45.0% |
TGCTACGATAGGCAAACATG+AGG | - | chr3_3:75549924-75549943 | Msa0473080:intron | 45.0% | |
!! | AGTAGCATTGACCCCAATCT+TGG | - | chr3_3:75550192-75550211 | Msa0473080:CDS | 45.0% |
TGATCGGAAACCATATGTCG+TGG | + | chr3_3:75550288-75550307 | None:intergenic | 45.0% | |
!! | TGTTTTGCAGGTTGGGTTGT+GGG | - | chr3_3:75550435-75550454 | Msa0473080:intron | 45.0% |
ACACTGCGCCAGAACAATTT+GGG | + | chr3_3:75550576-75550595 | None:intergenic | 45.0% | |
AACACTGCGCCAGAACAATT+TGG | + | chr3_3:75550577-75550596 | None:intergenic | 45.0% | |
AAATTGTTCTGGCGCAGTGT+TGG | - | chr3_3:75550576-75550595 | Msa0473080:intron | 45.0% | |
GAGTTGGGAGCTTGGATATA+TGG | - | chr3_3:75550780-75550799 | Msa0473080:intron | 45.0% | |
GCTTCTGTTCATATTCACCC+TGG | - | chr3_3:75550905-75550924 | Msa0473080:CDS | 45.0% | |
CTGCATTTCAAACAGACTCC+AGG | + | chr3_3:75550926-75550945 | None:intergenic | 45.0% | |
ATGCAGTTCTTACCGTGATC+TGG | - | chr3_3:75550940-75550959 | Msa0473080:intron | 45.0% | |
TTATCTAGCTAGCCCCCAAT+TGG | + | chr3_3:75551093-75551112 | None:intergenic | 45.0% | |
! | GCTCATGCAGGATTGATAAC+TGG | + | chr3_3:75551121-75551140 | None:intergenic | 45.0% |
ATATGGAAATGACAGGCTGC+AGG | - | chr3_3:75551193-75551212 | Msa0473080:intron | 45.0% | |
! | ATCTCCTCCTCCTTTTCTCT+CGG | - | chr3_3:75551760-75551779 | Msa0473080:intron | 45.0% |
AAACACACCGAGAGAAAAGG+AGG | + | chr3_3:75551770-75551789 | None:intergenic | 45.0% | |
CACAAACACACCGAGAGAAA+AGG | + | chr3_3:75551773-75551792 | None:intergenic | 45.0% | |
CAGTCCATGCCTTTCAATTG+AGG | + | chr3_3:75551799-75551818 | None:intergenic | 45.0% | |
TGGACTGTGTTCGACAAACA+AGG | - | chr3_3:75551812-75551831 | Msa0473080:intron | 45.0% | |
CTTGGTGGAACTCACGAAAT+TGG | - | chr3_3:75552182-75552201 | Msa0473080:CDS | 45.0% | |
GATTTCCAGTGTAACGCTAC+AGG | + | chr3_3:75552212-75552231 | None:intergenic | 45.0% | |
GTGCATGTAACCATATGGAG+AGG | - | chr3_3:75552283-75552302 | Msa0473080:intron | 45.0% | |
AGGTCATTTCCCTCTCCATA+TGG | + | chr3_3:75552296-75552315 | None:intergenic | 45.0% | |
ATGGAGAGGGAAATGACCTA+TGG | - | chr3_3:75552297-75552316 | Msa0473080:intron | 45.0% | |
! | AGTTGCTGCATTTGGGATAG+AGG | - | chr3_3:75552400-75552419 | Msa0473080:intron | 45.0% |
! | GTTGCTGCATTTGGGATAGA+GGG | - | chr3_3:75552401-75552420 | Msa0473080:intron | 45.0% |
! | TTGCTGCATTTGGGATAGAG+GGG | - | chr3_3:75552402-75552421 | Msa0473080:intron | 45.0% |
!! | TGGTGCCATTGAGAAATGAG+AGG | - | chr3_3:75552510-75552529 | Msa0473080:intron | 45.0% |
GTCACCCAAGTAAAGTTGGA+CGG | + | chr3_3:75552876-75552895 | None:intergenic | 45.0% | |
!! | GTCAACAGCATTGGTCGAAT+AGG | - | chr3_3:75552905-75552924 | Msa0473080:intron | 45.0% |
CACTTTATAGCCCACTTTGC+TGG | + | chr3_3:75553045-75553064 | None:intergenic | 45.0% | |
! | AAGAAACACTGACTGCTGAG+CGG | + | chr3_3:75553167-75553186 | None:intergenic | 45.0% |
TGTCTCAAGATCAGTCTGGA+TGG | - | chr3_3:75553309-75553328 | Msa0473080:CDS | 45.0% | |
! | AGGCTTTGCTGTAGTCAGAA+GGG | - | chr3_3:75553338-75553357 | Msa0473080:CDS | 45.0% |
!! | AAAAAAAAAAAAAAAAAAAG+CGG | - | chr3_3:75552046-75552065 | Msa0473080:CDS | 5.0% |
CCCCAATAAACTTTCCCACG+TGG | + | chr3_3:75546073-75546092 | None:intergenic | 50.0% | |
TCTGGCATCAGGCATGGTAT+AGG | - | chr3_3:75546295-75546314 | Msa0473080:intron | 50.0% | |
CATCAGGCATGGTATAGGAG+AGG | - | chr3_3:75546300-75546319 | Msa0473080:intron | 50.0% | |
GGCATGGTATAGGAGAGGAA+AGG | - | chr3_3:75546305-75546324 | Msa0473080:intron | 50.0% | |
AAGCTGTTCTCCTTCTGTCG+CGG | + | chr3_3:75546480-75546499 | None:intergenic | 50.0% | |
CCTGGTGAAACATCAGATGG+CGG | + | chr3_3:75547661-75547680 | None:intergenic | 50.0% | |
TCAGCATGAACCAACGAACC+TGG | + | chr3_3:75547679-75547698 | None:intergenic | 50.0% | |
CATTGGTGCGAGCAGTACAA+TGG | + | chr3_3:75548269-75548288 | None:intergenic | 50.0% | |
ATGTCAGAAGGCAGTACAGC+AGG | + | chr3_3:75548467-75548486 | None:intergenic | 50.0% | |
GGAGCTATGCTTGCCATCAA+TGG | - | chr3_3:75548759-75548778 | Msa0473080:intron | 50.0% | |
! | CATGGACTGTCAGATCAGTC+TGG | - | chr3_3:75549093-75549112 | Msa0473080:CDS | 50.0% |
GGAATTGTCTTACGGTCCAC+AGG | - | chr3_3:75549495-75549514 | Msa0473080:CDS | 50.0% | |
!! | CTGTTTTGCAGGTTGGGTTG+TGG | - | chr3_3:75550434-75550453 | Msa0473080:intron | 50.0% |
GCATTTAGGAGTTGGGAGCT+TGG | - | chr3_3:75550772-75550791 | Msa0473080:intron | 50.0% | |
CACGTGAAGACTCCAGATCA+CGG | + | chr3_3:75550955-75550974 | None:intergenic | 50.0% | |
GCGACCTCAATTGAAAGGCA+TGG | - | chr3_3:75551792-75551811 | Msa0473080:intron | 50.0% | |
TTGTCATGGTCTGCTGTTGC+AGG | - | chr3_3:75551873-75551892 | Msa0473080:intron | 50.0% | |
AAAGCGGGGGAGTAGAAGTT+TGG | - | chr3_3:75552062-75552081 | Msa0473080:CDS | 50.0% | |
TCCAGTGTAACGCTACAGGT+AGG | + | chr3_3:75552208-75552227 | None:intergenic | 50.0% | |
ACCAACTGCACGTAGCCATA+TGG | - | chr3_3:75552355-75552374 | Msa0473080:intron | 50.0% | |
TCCATATGGCTACGTGCAGT+TGG | + | chr3_3:75552359-75552378 | None:intergenic | 50.0% | |
TGCACGTAGCCATATGGAGA+GGG | - | chr3_3:75552361-75552380 | Msa0473080:intron | 50.0% | |
CTTGCTTATGGGTGCATCCA+TGG | + | chr3_3:75552668-75552687 | None:intergenic | 50.0% | |
! | GAGGCTTTGCTGTAGTCAGA+AGG | - | chr3_3:75553337-75553356 | Msa0473080:CDS | 50.0% |
! | GGCTTTGCTGTAGTCAGAAG+GGG | - | chr3_3:75553339-75553358 | Msa0473080:CDS | 50.0% |
! | GCTTTGCTGTAGTCAGAAGG+GGG | - | chr3_3:75553340-75553359 | Msa0473080:CDS | 50.0% |
! | TGTCACACACTTGGTTCTCG+AGG | - | chr3_3:75553377-75553396 | Msa0473080:CDS | 50.0% |
ACACTTACTACGGTCCAACC+AGG | - | chr3_3:75553437-75553456 | Msa0473080:exon | 50.0% | |
GGGAGAAGGTAGTACGTACC+TGG | + | chr3_3:75545240-75545259 | None:intergenic | 55.0% | |
GACCCTAGCTATGCTCTGTG+CGG | - | chr3_3:75545337-75545356 | Msa0473080:intron | 55.0% | |
ACCCTAGCTATGCTCTGTGC+GGG | - | chr3_3:75545338-75545357 | Msa0473080:intron | 55.0% | |
TCCCGCACAGAGCATAGCTA+GGG | + | chr3_3:75545342-75545361 | None:intergenic | 55.0% | |
TTCCCGCACAGAGCATAGCT+AGG | + | chr3_3:75545343-75545362 | None:intergenic | 55.0% | |
AGTAGTACAGCCGCGACAGA+AGG | - | chr3_3:75546467-75546486 | Msa0473080:intron | 55.0% | |
AAAGGCAGGGGGCTTTCAAG+GGG | + | chr3_3:75547085-75547104 | None:intergenic | 55.0% | |
CAAAGGCAGGGGGCTTTCAA+GGG | + | chr3_3:75547086-75547105 | None:intergenic | 55.0% | |
ACAAAGGCAGGGGGCTTTCA+AGG | + | chr3_3:75547087-75547106 | None:intergenic | 55.0% | |
TGGTACAGTGCGTTTGTGGC+AGG | - | chr3_3:75547574-75547593 | Msa0473080:CDS | 55.0% | |
CCGCCATCTGATGTTTCACC+AGG | - | chr3_3:75547658-75547677 | Msa0473080:CDS | 55.0% | |
GTCAGGAGTCTCCAGTTCTC+TGG | + | chr3_3:75547923-75547942 | None:intergenic | 55.0% | |
GTACAGTTCCAAGGGAGGTC+AGG | + | chr3_3:75547940-75547959 | None:intergenic | 55.0% | |
GGACTGTCAGATCAGTCTGG+AGG | - | chr3_3:75549096-75549115 | Msa0473080:CDS | 55.0% | |
AGCTTTGCCCACTCTGACCT+AGG | + | chr3_3:75549359-75549378 | None:intergenic | 55.0% | |
ACAACACAAGCCGTAGCAGC+TGG | - | chr3_3:75549463-75549482 | Msa0473080:CDS | 55.0% | |
CAACACAAGCCGTAGCAGCT+GGG | - | chr3_3:75549464-75549483 | Msa0473080:CDS | 55.0% | |
GCACAAAGCGCATCTGTGCA+AGG | + | chr3_3:75549690-75549709 | None:intergenic | 55.0% | |
CACACCGAGAGAAAAGGAGG+AGG | + | chr3_3:75551767-75551786 | None:intergenic | 55.0% | |
GCCTACCTGTAGCGTTACAC+TGG | - | chr3_3:75552204-75552223 | Msa0473080:CDS | 55.0% | |
CTGCACGTAGCCATATGGAG+AGG | - | chr3_3:75552360-75552379 | Msa0473080:intron | 55.0% | |
! | GAGGGGAAGCGTGATCTAGT+AGG | - | chr3_3:75552419-75552438 | Msa0473080:intron | 55.0% |
CGTGATCTAGTAGGCTCCAC+AGG | - | chr3_3:75552428-75552447 | Msa0473080:intron | 55.0% | |
TGGAGACTCCTGACCTCCCT+TGG | - | chr3_3:75547929-75547948 | Msa0473080:CDS | 60.0% | |
CAGCTGACACCCAGCTGCTA+CGG | + | chr3_3:75549476-75549495 | None:intergenic | 60.0% | |
GCACTTCTCAGCGGCACCAT+AGG | + | chr3_3:75552316-75552335 | None:intergenic | 60.0% | |
! | ACACTGACTGCTGAGCGGCT+TGG | + | chr3_3:75553162-75553181 | None:intergenic | 60.0% |
CGTAGCAGCTGGGTGTCAGC+TGG | - | chr3_3:75549474-75549493 | Msa0473080:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 75545044 | 75553505 | 75545044 | ID=Msa0473080;Name=Msa0473080 |
chr3_3 | mRNA | 75545044 | 75553505 | 75545044 | ID=Msa0473080-mRNA-1;Parent=Msa0473080;Name=Msa0473080-mRNA-1;_AED=0.11;_eAED=0.11;_QI=68|1|1|1|0.93|0.87|16|393|777 |
chr3_3 | exon | 75545044 | 75545269 | 75545044 | ID=Msa0473080-mRNA-1:exon:19648;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75545376 | 75545740 | 75545376 | ID=Msa0473080-mRNA-1:exon:19647;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75546574 | 75546654 | 75546574 | ID=Msa0473080-mRNA-1:exon:19646;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75547227 | 75547341 | 75547227 | ID=Msa0473080-mRNA-1:exon:19645;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75547541 | 75547698 | 75547541 | ID=Msa0473080-mRNA-1:exon:19644;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75547892 | 75548104 | 75547892 | ID=Msa0473080-mRNA-1:exon:19643;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75549033 | 75549188 | 75549033 | ID=Msa0473080-mRNA-1:exon:19642;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75549385 | 75549525 | 75549385 | ID=Msa0473080-mRNA-1:exon:19641;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75549752 | 75549886 | 75549752 | ID=Msa0473080-mRNA-1:exon:19640;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75549984 | 75550373 | 75549984 | ID=Msa0473080-mRNA-1:exon:19639;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75550835 | 75550953 | 75550835 | ID=Msa0473080-mRNA-1:exon:19638;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75552039 | 75552243 | 75552039 | ID=Msa0473080-mRNA-1:exon:19637;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75552707 | 75552778 | 75552707 | ID=Msa0473080-mRNA-1:exon:19636;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75552908 | 75552994 | 75552908 | ID=Msa0473080-mRNA-1:exon:19635;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75553096 | 75553230 | 75553096 | ID=Msa0473080-mRNA-1:exon:19634;Parent=Msa0473080-mRNA-1 |
chr3_3 | exon | 75553309 | 75553505 | 75553309 | ID=Msa0473080-mRNA-1:exon:19633;Parent=Msa0473080-mRNA-1 |
chr3_3 | five_prime_UTR | 75553438 | 75553505 | 75553438 | ID=Msa0473080-mRNA-1:five_prime_utr;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75553309 | 75553437 | 75553309 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75553096 | 75553230 | 75553096 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75552908 | 75552994 | 75552908 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75552707 | 75552778 | 75552707 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75552039 | 75552243 | 75552039 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75550835 | 75550953 | 75550835 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75549984 | 75550373 | 75549984 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75549752 | 75549886 | 75549752 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75549385 | 75549525 | 75549385 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75549033 | 75549188 | 75549033 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75547892 | 75548104 | 75547892 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75547541 | 75547698 | 75547541 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75547227 | 75547341 | 75547227 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75546574 | 75546654 | 75546574 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | CDS | 75545543 | 75545740 | 75545543 | ID=Msa0473080-mRNA-1:cds;Parent=Msa0473080-mRNA-1 |
chr3_3 | three_prime_UTR | 75545376 | 75545542 | 75545376 | ID=Msa0473080-mRNA-1:three_prime_utr;Parent=Msa0473080-mRNA-1 |
chr3_3 | three_prime_UTR | 75545044 | 75545269 | 75545044 | ID=Msa0473080-mRNA-1:three_prime_utr;Parent=Msa0473080-mRNA-1 |
Gene Sequence |
Protein sequence |