AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1410470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1410470 MtrunA17_Chr4g0036001 97.941 874 17 1 1 873 1 874 0.0 1767
Msa1410470 MtrunA17_Chr5g0405181 60.759 553 151 9 1 493 1 547 0.0 633
Msa1410470 MtrunA17_Chr5g0405181 44.781 297 139 6 575 865 669 946 8.27e-66 238
Msa1410470 MtrunA17_Chr8g0372171 71.264 435 116 3 1 431 1 430 0.0 626
Msa1410470 MtrunA17_Chr8g0372171 36.864 236 113 8 548 765 813 1030 2.11e-27 119
Msa1410470 MtrunA17_Chr3g0142261 62.470 421 146 4 19 438 14 423 3.74e-166 523
Msa1410470 MtrunA17_Chr3g0142261 38.113 265 135 9 623 872 1270 1520 5.98e-43 169
Msa1410470 MtrunA17_Chr6g0483701 57.820 422 165 5 17 435 23 434 6.08e-148 461
Msa1410470 MtrunA17_Chr6g0483701 40.773 233 129 4 632 855 711 943 3.14e-45 176
Msa1410470 MtrunA17_Chr4g0070001 53.922 408 166 4 22 429 141 526 2.61e-130 416
Msa1410470 MtrunA17_Chr4g0070001 35.985 264 156 7 610 865 770 1028 7.79e-42 166
Msa1410470 MtrunA17_Chr1g0152231 38.964 444 244 9 23 454 2 430 8.75e-80 275
Msa1410470 MtrunA17_Chr1g0193221 43.169 366 185 6 23 376 2 356 1.29e-78 278
Msa1410470 MtrunA17_Chr7g0258991 39.480 423 227 10 21 425 70 481 7.99e-76 267
Msa1410470 MtrunA17_Chr3g0145071 37.931 435 245 8 3 425 80 501 9.59e-75 265
Msa1410470 MtrunA17_Chr4g0035661 37.590 415 236 7 23 425 88 491 6.41e-73 259
Msa1410470 MtrunA17_Chr1g0178411 33.628 452 259 8 11 431 5 446 1.10e-55 208
Msa1410470 MtrunA17_Chr2g0327581 33.092 414 244 6 10 399 40 444 1.19e-54 205
Msa1410470 MtrunA17_Chr7g0266631 33.178 428 251 6 25 421 10 433 8.92e-54 202
Msa1410470 MtrunA17_Chr1g0182151 31.195 452 278 9 22 445 52 498 2.15e-51 195
Msa1410470 MtrunA17_Chr3g0122121 36.815 383 195 12 25 373 99 468 3.47e-51 195
Msa1410470 MtrunA17_Chr2g0322291 33.810 420 230 9 3 382 60 471 6.12e-50 191
Msa1410470 MtrunA17_Chr3g0132921 30.886 463 247 11 70 492 47 476 9.44e-50 184
Msa1410470 MtrunA17_Chr8g0369881 32.979 376 227 8 2 365 853 1215 5.18e-49 188
Msa1410470 MtrunA17_Chr8g0377731 34.250 400 215 10 25 392 56 439 9.66e-49 187
Msa1410470 MtrunA17_Chr5g0427481 35.965 342 174 8 70 376 55 386 2.71e-47 183
Msa1410470 MtrunA17_Chr4g0053211 34.351 393 201 14 70 411 50 436 3.25e-47 182
Msa1410470 MtrunA17_Chr1g0195111 35.106 376 217 10 16 376 388 751 6.25e-47 181
Msa1410470 MtrunA17_Chr4g0045381 35.751 386 192 8 25 372 194 561 6.73e-47 182
Msa1410470 MtrunA17_Chr4g0062291 34.758 351 202 8 18 350 117 458 4.41e-46 176
Msa1410470 MtrunA17_Chr5g0407791 32.461 382 234 9 7 375 872 1242 1.08e-45 178
Msa1410470 MtrunA17_Chr2g0307481 35.088 342 202 8 22 350 66 400 1.20e-44 171
Msa1410470 MtrunA17_Chr4g0069141 36.053 380 200 12 25 376 154 518 1.22e-44 175
Msa1410470 MtrunA17_Chr1g0192481 33.747 403 229 14 12 389 49 438 2.18e-44 169
Msa1410470 MtrunA17_Chr1g0153061 33.422 377 207 10 70 404 46 420 7.90e-43 169
Msa1410470 MtrunA17_Chr5g0398521 33.777 376 216 8 24 372 57 426 1.48e-42 167
Msa1410470 MtrunA17_Chr3g0134191 33.247 385 212 10 70 411 46 428 2.87e-42 167
Msa1410470 MtrunA17_Chr2g0319271 33.690 374 192 11 4 340 380 734 3.11e-41 162
Msa1410470 MtrunA17_Chr2g0312631 30.819 464 278 17 25 463 385 830 3.53e-41 163
Msa1410470 MtrunA17_Chr3g0102921 31.738 397 217 12 16 377 430 807 3.67e-41 164
Msa1410470 MtrunA17_Chr7g0271961 31.818 374 227 10 16 376 393 751 7.03e-41 162
Msa1410470 MtrunA17_Chr5g0411971 32.084 427 262 13 7 416 381 796 1.28e-40 162
Msa1410470 MtrunA17_Chr7g0245931 31.733 375 230 6 24 375 52 423 1.38e-40 161
Msa1410470 MtrunA17_Chr5g0447041 30.824 425 213 13 16 377 426 832 5.58e-40 160
Msa1410470 MtrunA17_Chr2g0280421 33.240 358 211 9 1 341 415 761 7.74e-40 158
Msa1410470 MtrunA17_Chr4g0042061 33.242 364 206 9 4 340 413 766 1.72e-39 157
Msa1410470 MtrunA17_Chr2g0331761 33.735 332 205 7 24 347 185 509 2.17e-39 156
Msa1410470 MtrunA17_Chr5g0421521 30.580 448 275 14 7 429 356 792 2.65e-39 157
Msa1410470 MtrunA17_Chr5g0421591 30.804 448 274 14 7 429 356 792 6.22e-39 156
Msa1410470 MtrunA17_Chr4g0049011 31.319 364 214 8 3 340 259 612 1.02e-38 153
Msa1410470 MtrunA17_Chr6g0485471 33.529 340 213 7 13 347 108 439 4.39e-38 152
Msa1410470 MtrunA17_Chr1g0191851 33.684 380 210 13 25 378 148 511 3.28e-37 150
Msa1410470 MtrunA17_Chr7g0238581 29.798 396 231 11 24 384 25 408 9.50e-37 147
Msa1410470 MtrunA17_Chr7g0272871 31.894 417 246 13 25 417 128 530 1.24e-36 148
Msa1410470 MtrunA17_Chr2g0295881 33.138 341 208 8 24 347 197 534 1.00e-35 145
Msa1410470 MtrunA17_Chr7g0257301 31.707 410 210 13 16 373 384 775 1.25e-35 146
Msa1410470 MtrunA17_Chr4g0067421 32.733 333 204 8 24 340 205 533 4.81e-33 137
Msa1410470 MtrunA17_Chr3g0101021 28.272 382 224 9 25 374 76 439 1.38e-31 133
Msa1410470 MtrunA17_Chr5g0445211 28.818 347 215 8 71 386 109 454 2.24e-29 126
Msa1410470 MtrunA17_Chr1g0191181 27.889 398 225 9 71 448 128 483 3.32e-27 117
Msa1410470 MtrunA17_Chr7g0269681 38.122 181 104 4 196 376 49 221 8.38e-25 108
Msa1410470 MtrunA17_Chr8g0372181 51.648 91 43 1 779 868 1 91 2.79e-23 95.1
Msa1410470 MtrunA17_Chr8g0386891 40.690 145 80 3 196 340 12 150 5.47e-21 96.7
Msa1410470 MtrunA17_Chr8g0367581 29.909 331 202 13 25 344 147 458 8.48e-19 92.4
Msa1410470 MtrunA17_Chr6g0484501 33.333 207 112 5 196 400 42 224 3.04e-17 82.0
Msa1410470 MtrunA17_Chr6g0470541 23.585 318 214 11 21 326 2 302 1.97e-16 84.3
Msa1410470 MtrunA17_Chr8g0390991 38.621 145 83 3 196 340 12 150 2.81e-16 83.2
Msa1410470 MtrunA17_Chr7g0269691 35.758 165 91 5 16 169 392 552 4.08e-14 76.3
Msa1410470 MtrunA17_Chr8g0390981 33.143 175 98 6 9 169 499 668 4.60e-14 76.3
Msa1410470 MtrunA17_Chr6g0484511 33.548 155 85 5 25 166 290 439 6.01e-14 75.5
Msa1410470 MtrunA17_Chr8g0386901 32.500 160 95 4 16 164 475 632 2.37e-13 73.9
Msa1410470 MtrunA17_Chr3g0142841 25.191 262 176 6 73 322 145 398 9.12e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1410470 AT2G21300.2 58.297 916 283 19 1 872 1 861 0.0 984
Msa1410470 AT2G21300.4 58.297 916 283 19 1 872 1 861 0.0 984
Msa1410470 AT2G21300.3 58.297 916 283 19 1 872 1 861 0.0 984
Msa1410470 AT2G21300.1 58.297 916 283 19 1 872 1 861 0.0 984
Msa1410470 AT2G21300.5 58.297 916 283 19 1 872 1 861 0.0 984
Msa1410470 AT4G38950.3 58.192 885 276 19 22 872 11 835 0.0 935
Msa1410470 AT4G38950.5 58.192 885 276 19 22 872 11 835 0.0 935
Msa1410470 AT4G38950.4 58.192 885 276 19 22 872 11 835 0.0 935
Msa1410470 AT4G38950.1 58.192 885 276 19 22 872 11 835 0.0 935
Msa1410470 AT4G38950.2 58.192 885 276 19 22 872 11 835 0.0 935
Msa1410470 AT3G51150.2 64.238 453 151 4 13 458 6 454 0.0 593
Msa1410470 AT3G51150.2 51.471 204 95 3 672 872 849 1051 1.76e-57 214
Msa1410470 AT3G51150.1 64.238 453 151 4 13 458 6 454 0.0 593
Msa1410470 AT3G51150.1 51.471 204 95 3 672 872 847 1049 1.77e-57 214
Msa1410470 AT3G51150.4 64.238 453 151 4 13 458 6 454 0.0 593
Msa1410470 AT3G51150.4 51.471 204 95 3 672 872 849 1051 1.76e-57 214
Msa1410470 AT3G51150.3 64.238 453 151 4 13 458 6 454 0.0 593
Msa1410470 AT3G51150.3 51.471 204 95 3 672 872 849 1051 1.76e-57 214
Msa1410470 AT5G66310.2 67.371 426 135 2 13 434 7 432 0.0 583
Msa1410470 AT5G66310.2 43.200 250 124 5 632 872 820 1060 7.01e-52 197
Msa1410470 AT5G66310.3 67.371 426 135 2 13 434 7 432 0.0 583
Msa1410470 AT5G66310.3 43.200 250 124 5 632 872 820 1060 7.01e-52 197
Msa1410470 AT5G66310.1 67.371 426 135 2 13 434 7 432 0.0 583
Msa1410470 AT5G66310.1 43.200 250 124 5 632 872 820 1060 7.01e-52 197
Msa1410470 AT4G24170.1 67.464 418 121 7 20 428 2 413 3.70e-180 546
Msa1410470 AT4G24170.1 38.362 232 113 6 643 870 791 996 4.45e-36 147
Msa1410470 AT4G24170.2 67.464 418 121 7 20 428 2 413 3.70e-180 546
Msa1410470 AT4G24170.2 38.362 232 113 6 643 870 791 996 4.45e-36 147
Msa1410470 AT1G18370.1 58.034 417 157 5 22 433 29 432 5.01e-146 456
Msa1410470 AT1G18370.1 36.948 249 134 5 632 864 721 962 3.15e-44 173
Msa1410470 AT3G43210.3 56.699 418 170 5 9 419 9 422 3.37e-143 448
Msa1410470 AT3G43210.3 34.483 319 180 12 567 863 614 925 2.57e-41 164
Msa1410470 AT3G43210.5 56.699 418 170 5 9 419 9 422 3.37e-143 448
Msa1410470 AT3G43210.5 34.483 319 180 12 567 863 614 925 2.57e-41 164
Msa1410470 AT3G43210.2 56.699 418 170 5 9 419 9 422 3.37e-143 448
Msa1410470 AT3G43210.2 34.483 319 180 12 567 863 614 925 2.57e-41 164
Msa1410470 AT3G43210.4 56.699 418 170 5 9 419 9 422 3.37e-143 448
Msa1410470 AT3G43210.4 34.483 319 180 12 567 863 614 925 2.57e-41 164
Msa1410470 AT3G43210.1 56.699 418 170 5 9 419 9 422 3.37e-143 448
Msa1410470 AT3G43210.1 34.483 319 180 12 567 863 614 925 2.57e-41 164
Msa1410470 AT5G42490.2 69.145 269 82 1 20 288 5 272 6.26e-115 377
Msa1410470 AT5G42490.2 46.328 177 86 3 696 870 906 1075 2.02e-43 171
Msa1410470 AT5G42490.1 69.145 269 82 1 20 288 5 272 6.74e-115 377
Msa1410470 AT5G42490.1 46.328 177 86 3 696 870 910 1079 1.76e-43 171
Msa1410470 AT3G51150.5 64.014 289 95 3 175 458 17 301 3.63e-111 362
Msa1410470 AT3G51150.5 51.471 204 95 3 672 872 696 898 8.55e-58 214
Msa1410470 AT3G10180.2 42.667 375 193 5 23 385 2 366 2.30e-84 295
Msa1410470 AT3G10180.1 42.667 375 193 5 23 385 2 366 3.01e-84 295
Msa1410470 AT3G12020.4 44.077 363 188 5 21 377 66 419 6.45e-79 276
Msa1410470 AT3G12020.1 44.077 363 188 5 21 377 66 419 6.45e-79 276
Msa1410470 AT3G12020.3 40.898 423 222 9 21 425 66 478 2.48e-78 275
Msa1410470 AT3G12020.2 40.898 423 222 9 21 425 66 478 2.48e-78 275
Msa1410470 AT5G06670.8 41.598 363 197 5 21 377 63 416 6.57e-77 265
Msa1410470 AT5G06670.4 41.598 363 197 5 21 377 63 416 6.57e-77 265
Msa1410470 AT5G06670.7 41.598 363 197 5 21 377 63 416 6.57e-77 265
Msa1410470 AT5G06670.5 41.598 363 197 5 21 377 63 416 1.28e-76 265
Msa1410470 AT1G21730.1 42.400 375 199 7 21 388 72 436 3.33e-75 264
Msa1410470 AT5G06670.2 41.598 363 197 5 21 377 63 416 4.18e-75 265
Msa1410470 AT5G06670.3 41.598 363 197 5 21 377 63 416 4.18e-75 265
Msa1410470 AT1G59540.1 42.350 366 189 7 23 377 2 356 9.45e-74 258
Msa1410470 AT5G06670.6 40.591 372 197 6 21 377 63 425 2.27e-72 257
Msa1410470 AT5G06670.1 40.591 372 197 6 21 377 63 425 2.27e-72 257
Msa1410470 AT4G39050.1 37.292 421 239 7 18 425 92 500 3.20e-72 258
Msa1410470 AT2G21380.2 37.198 414 235 8 25 425 105 506 5.05e-71 254
Msa1410470 AT2G21380.1 37.198 414 235 8 25 425 105 506 5.05e-71 254
Msa1410470 AT2G28620.1 34.000 450 258 9 9 430 40 478 1.51e-58 218
Msa1410470 AT2G28620.3 34.000 450 258 9 9 430 40 478 1.54e-58 218
Msa1410470 AT2G28620.2 34.000 450 258 9 9 430 40 478 1.54e-58 218
Msa1410470 AT1G59540.2 44.828 261 134 3 122 377 9 264 1.31e-57 211
Msa1410470 AT2G36200.1 32.960 446 253 10 10 421 3 436 2.43e-54 204
Msa1410470 AT4G14150.1 35.013 397 206 8 25 386 92 471 1.77e-53 202
Msa1410470 AT2G36200.2 33.333 435 244 10 10 410 3 425 2.14e-53 202
Msa1410470 AT3G45850.2 32.639 432 261 6 25 430 56 483 2.80e-53 201
Msa1410470 AT3G45850.1 32.639 432 261 6 25 430 56 483 2.80e-53 201
Msa1410470 AT3G23670.2 34.152 407 213 9 17 387 91 478 6.12e-52 197
Msa1410470 AT3G23670.1 34.152 407 213 9 17 387 91 478 1.44e-51 197
Msa1410470 AT2G37420.1 32.104 461 255 12 22 442 46 488 8.45e-51 194
Msa1410470 AT2G37420.2 32.104 461 255 12 22 442 46 488 8.45e-51 194
Msa1410470 AT3G49650.1 34.759 374 215 10 25 376 15 381 2.74e-50 191
Msa1410470 AT3G17360.3 36.842 399 198 12 25 390 169 546 1.22e-49 191
Msa1410470 AT3G17360.2 36.842 399 198 12 25 390 169 546 1.24e-49 191
Msa1410470 AT3G17360.1 37.143 385 189 11 25 376 169 533 1.28e-49 191
Msa1410470 AT3G44050.1 35.696 381 203 8 25 374 94 463 8.52e-48 185
Msa1410470 AT3G63480.2 34.930 355 202 7 25 360 4 348 2.01e-46 173
Msa1410470 AT3G19050.1 36.667 360 181 6 25 353 194 537 6.04e-46 180
Msa1410470 AT1G18550.1 34.903 361 197 9 9 346 136 481 1.10e-45 176
Msa1410470 AT5G60930.3 31.633 392 213 9 71 414 45 429 4.08e-45 177
Msa1410470 AT5G65930.1 33.073 384 229 9 7 375 870 1240 4.15e-45 177
Msa1410470 AT5G65930.2 32.884 371 224 8 7 365 871 1228 4.27e-45 176
Msa1410470 AT5G60930.2 31.633 392 213 9 71 414 45 429 4.39e-45 177
Msa1410470 AT5G65930.3 32.884 371 224 8 7 365 877 1234 4.60e-45 176
Msa1410470 AT3G63480.1 34.540 359 202 9 25 360 4 352 5.26e-45 169
Msa1410470 AT5G60930.1 31.633 392 213 9 71 414 45 429 5.58e-45 176
Msa1410470 AT5G27000.1 34.133 375 222 10 16 376 386 749 4.85e-44 172
Msa1410470 AT2G47500.1 35.550 391 218 12 16 382 391 771 5.69e-44 172
Msa1410470 AT2G47500.2 35.550 391 218 12 16 382 391 771 6.83e-44 172
Msa1410470 AT1G09170.4 33.416 404 227 12 16 393 426 813 6.94e-44 171
Msa1410470 AT1G09170.5 33.002 403 230 11 16 393 426 813 8.26e-44 172
Msa1410470 AT1G09170.2 33.002 403 230 11 16 393 426 813 8.32e-44 172
Msa1410470 AT3G50240.2 30.679 427 234 13 25 404 26 437 3.13e-43 170
Msa1410470 AT3G50240.1 31.075 428 231 13 25 404 26 437 3.13e-43 170
Msa1410470 AT3G50240.4 31.075 428 231 13 25 404 26 437 3.84e-43 170
Msa1410470 AT5G47820.2 32.767 412 221 13 25 389 12 414 6.86e-43 169
Msa1410470 AT5G47820.1 32.767 412 221 13 25 389 12 414 6.86e-43 169
Msa1410470 AT1G09170.3 33.693 371 220 10 16 372 426 784 1.59e-42 167
Msa1410470 AT1G09170.7 33.693 371 220 10 16 372 426 784 1.59e-42 167
Msa1410470 AT1G12430.1 33.065 372 223 7 24 372 70 438 2.53e-42 167
Msa1410470 AT1G12430.2 33.065 372 223 7 24 372 70 438 2.85e-42 167
Msa1410470 AT3G16060.1 34.694 343 205 8 13 347 162 493 1.39e-41 163
Msa1410470 AT3G44730.2 33.815 346 193 10 16 340 414 744 2.42e-41 164
Msa1410470 AT3G44730.3 33.815 346 193 10 16 340 414 744 2.42e-41 164
Msa1410470 AT3G44730.1 33.815 346 193 10 16 340 369 699 2.70e-41 164
Msa1410470 AT3G44730.4 33.815 346 193 10 16 340 369 699 2.70e-41 164
Msa1410470 AT5G54670.3 33.056 360 211 7 4 341 317 668 3.92e-41 162
Msa1410470 AT1G01950.1 29.861 432 248 10 16 421 55 457 5.24e-41 163
Msa1410470 AT5G54670.1 33.056 360 211 7 4 341 377 728 5.88e-41 162
Msa1410470 AT5G54670.2 33.056 360 211 7 4 341 377 728 5.88e-41 162
Msa1410470 AT1G01950.2 29.861 432 248 10 16 421 55 457 5.90e-41 162
Msa1410470 AT1G01950.3 29.861 432 248 10 16 421 55 457 6.10e-41 163
Msa1410470 AT4G27180.1 33.425 362 207 9 4 341 368 719 9.77e-41 161
Msa1410470 AT4G27180.2 33.425 362 207 9 4 341 368 719 9.77e-41 161
Msa1410470 AT2G22610.2 31.415 417 238 13 7 407 400 784 1.20e-40 162
Msa1410470 AT5G27550.2 33.178 428 231 13 25 440 133 517 1.59e-40 160
Msa1410470 AT5G27550.1 33.178 428 231 13 25 440 133 517 1.59e-40 160
Msa1410470 AT3G54870.1 31.105 389 214 10 56 423 135 490 2.35e-40 161
Msa1410470 AT3G54870.3 31.105 389 214 10 56 423 135 490 2.43e-40 161
Msa1410470 AT5G41310.1 31.971 416 227 14 16 418 414 786 2.81e-40 161
Msa1410470 AT3G54870.2 31.105 389 214 10 56 423 135 490 2.91e-40 161
Msa1410470 AT1G73860.1 30.846 402 235 12 25 409 510 885 1.21e-39 159
Msa1410470 AT4G05190.2 33.333 345 193 8 25 341 416 751 1.63e-39 157
Msa1410470 AT4G05190.1 32.597 362 207 8 8 341 412 764 1.71e-39 157
Msa1410470 AT1G73860.2 30.846 402 235 12 25 409 427 802 3.22e-39 157
Msa1410470 AT4G21270.1 32.464 345 196 8 25 341 432 767 4.96e-38 153
Msa1410470 AT1G63640.3 30.693 404 236 12 16 402 464 840 1.20e-37 153
Msa1410470 AT1G63640.5 30.693 404 236 12 16 402 454 830 1.21e-37 153
Msa1410470 AT1G63640.1 30.693 404 236 12 16 402 464 840 1.33e-37 152
Msa1410470 AT1G63640.4 30.693 404 236 12 16 402 464 840 1.33e-37 152
Msa1410470 AT1G63640.2 31.017 403 229 13 16 402 464 833 1.36e-37 152
Msa1410470 AT2G22610.1 26.275 647 411 21 7 601 400 1032 1.39e-37 152
Msa1410470 AT2G22610.3 26.275 647 411 21 7 601 401 1033 1.52e-37 152
Msa1410470 AT3G10310.2 34.746 354 177 12 16 340 355 683 2.14e-37 152
Msa1410470 AT3G10310.1 34.746 354 177 12 16 340 355 683 2.39e-37 152
Msa1410470 AT1G09170.6 33.754 317 188 8 16 319 426 733 2.58e-37 150
Msa1410470 AT1G09170.8 33.754 317 188 8 16 319 426 733 2.58e-37 150
Msa1410470 AT1G18410.3 32.727 330 200 8 25 340 490 811 3.91e-37 151
Msa1410470 AT1G18410.2 32.727 330 200 8 25 340 490 811 3.91e-37 151
Msa1410470 AT1G18410.4 32.727 330 200 8 25 340 633 954 6.17e-37 150
Msa1410470 AT1G72250.4 29.913 458 280 16 4 436 492 933 1.16e-36 150
Msa1410470 AT1G72250.3 29.913 458 280 16 4 436 493 934 1.19e-36 150
Msa1410470 AT1G72250.2 29.913 458 280 16 4 436 481 922 1.43e-36 149
Msa1410470 AT1G72250.1 29.913 458 280 16 4 436 472 913 1.55e-36 149
Msa1410470 AT1G18410.5 32.722 327 196 8 25 340 480 793 8.20e-36 147
Msa1410470 AT3G50240.3 33.138 341 173 9 111 404 3 335 9.30e-36 146
Msa1410470 AT1G18410.1 32.722 327 196 8 25 340 633 946 1.23e-35 146
Msa1410470 AT1G55550.1 32.888 374 205 12 25 375 92 442 3.94e-35 144
Msa1410470 AT1G09170.1 30.256 390 222 11 16 393 426 777 2.07e-34 142
Msa1410470 AT3G16630.2 31.287 342 210 7 24 347 193 527 6.16e-34 140
Msa1410470 AT3G16630.1 31.287 342 210 7 24 347 193 527 6.16e-34 140
Msa1410470 AT5G02370.1 28.696 345 212 11 25 353 21 347 2.26e-32 133
Msa1410470 AT3G20150.2 27.507 349 217 6 71 386 136 481 6.82e-31 131
Msa1410470 AT3G20150.1 27.507 349 217 6 71 386 136 481 8.30e-31 131
Msa1410470 AT1G01950.4 29.730 333 204 6 107 413 1 329 8.32e-29 124
Msa1410470 AT5G27950.1 31.310 313 184 8 71 367 119 416 1.83e-28 122
Msa1410470 AT5G65460.2 29.305 331 204 10 25 344 139 450 6.25e-21 99.4
Msa1410470 AT5G65460.6 29.305 331 204 10 25 344 139 450 6.56e-21 99.4
Msa1410470 AT5G65460.4 29.305 331 204 10 25 344 139 450 6.97e-21 99.4
Msa1410470 AT5G65460.1 29.305 331 204 10 25 344 139 450 7.64e-21 99.4
Msa1410470 AT5G65460.3 28.402 338 205 9 25 344 139 457 2.19e-20 97.8
Msa1410470 AT5G27950.2 30.078 256 155 6 122 367 9 250 7.51e-19 90.9
Msa1410470 AT5G10470.1 28.399 331 207 9 25 344 143 454 3.07e-18 90.9
Msa1410470 AT5G10470.2 28.399 331 207 9 25 344 143 454 3.32e-18 90.9
Msa1410470 AT5G23910.2 25.912 274 176 9 60 323 45 301 1.50e-15 81.6
Msa1410470 AT5G23910.1 25.912 274 176 9 60 323 41 297 1.59e-15 81.6
Msa1410470 AT4G14330.1 27.027 296 175 9 71 344 89 365 7.68e-15 79.7
Msa1410470 AT1G20060.7 29.091 275 157 9 73 323 165 425 3.43e-12 70.9
Msa1410470 AT1G20060.4 29.091 275 157 9 73 323 165 425 3.60e-12 70.9
Msa1410470 AT1G20060.8 29.091 275 157 9 73 323 165 425 3.60e-12 70.9
Msa1410470 AT1G20060.10 29.091 275 157 9 73 323 165 425 3.62e-12 70.9
Msa1410470 AT1G20060.3 29.091 275 157 9 73 323 165 425 3.75e-12 70.9
Msa1410470 AT1G20060.9 29.091 275 157 9 73 323 165 425 3.77e-12 70.9
Msa1410470 AT1G20060.5 29.091 275 157 9 73 323 165 425 4.00e-12 70.9
Msa1410470 AT1G20060.6 29.091 275 157 9 73 323 165 425 4.24e-12 70.9
Msa1410470 AT1G20060.2 29.091 275 157 9 73 323 165 425 4.28e-12 70.9

Find 221 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAACCATCTAAATTTAA+TGG 0.137277 tig0023655:+37034 None:intergenic
CTGGAAGACCAGATGGTTTA+TGG 0.148054 tig0023655:-37069 Msa1410470:CDS
AAGTTCTGCCAGGGAATTTC+TGG 0.153690 tig0023655:-38699 Msa1410470:CDS
CCATTCAATGGGTTTGAAAA+AGG 0.199093 tig0023655:-37097 Msa1410470:CDS
TGCAGCTAGCAGACCGTTTA+TGG 0.204765 tig0023655:-35850 Msa1410470:CDS
CTCACATTGCGTGTTGAATT+TGG 0.223910 tig0023655:-41726 None:intergenic
TTTGGCAGGAAGAAGATTTA+TGG 0.227161 tig0023655:-37663 Msa1410470:intron
TCAGATGGATAAGGAAATTA+AGG 0.238308 tig0023655:-37883 Msa1410470:intron
CACATACCAATCTGATAATT+TGG 0.239249 tig0023655:+38805 None:intergenic
TTCCTCCTTGCTGCAAATTA+AGG 0.242724 tig0023655:-35357 Msa1410470:three_prime_UTR
TTTGGCAGACAGAGTATTTC+GGG 0.243450 tig0023655:-39832 Msa1410470:intron
CCTGTCTGGTGTCTGGTGTC+TGG 0.249052 tig0023655:+41402 None:intergenic
AAGCTCTACCTCCATGTAAA+TGG 0.274251 tig0023655:+36189 None:intergenic
AAGTAGGTCCTGTGGGTTAA+TGG 0.288853 tig0023655:+36244 None:intergenic
AACGATTCTCAGTCTTCTAT+TGG 0.293108 tig0023655:-36998 Msa1410470:CDS
ACAGTATCTGGAGGGGAAAA+TGG 0.295774 tig0023655:-37292 Msa1410470:CDS
GATTTGGCTTTGACAGTATC+TGG 0.301840 tig0023655:-37304 Msa1410470:CDS
CTTAAGTGACAACGGGGATT+TGG 0.305652 tig0023655:-37320 Msa1410470:CDS
TTCAATCCATTAAATTTAGA+TGG 0.309591 tig0023655:-37040 Msa1410470:CDS
TACATTAACCTGTGCTTTAG+TGG 0.313427 tig0023655:+38140 None:intergenic
CTTTGGCAGACAGAGTATTT+CGG 0.315274 tig0023655:-39833 Msa1410470:intron
CATAAACCATCTGGTCTTCC+AGG 0.318695 tig0023655:+37070 None:intergenic
TCAAATGTGTAGACATTTCC+TGG 0.325306 tig0023655:+37263 None:intergenic
TAAGTAAACTCCGGTTTATA+TGG 0.325660 tig0023655:+38456 None:intergenic
CTCTCCATTTCTCCTGTCTC+AGG 0.330013 tig0023655:+37124 None:intergenic
GAAAGATCAGATATCTAAAA+AGG 0.331016 tig0023655:-37799 Msa1410470:intron
ATCTCAAGCTGTTGCCTCTA+AGG 0.331700 tig0023655:+36957 None:intergenic
ATACAAACTACTCACTTTAG+AGG 0.353065 tig0023655:-35528 Msa1410470:three_prime_UTR
TTTAATTATTCAGATGGATA+AGG 0.359650 tig0023655:-37892 Msa1410470:intron
TCATCCCAGCAACAAAAGTA+TGG 0.377323 tig0023655:+36906 None:intergenic
TTTCCAAGTGCCTACACATT+TGG 0.377835 tig0023655:-40424 Msa1410470:intron
TGCTAATGAATCTGCAGATT+GGG 0.381276 tig0023655:-40503 Msa1410470:CDS
CTGTCTGGTGTCTGGTGTCT+GGG 0.384502 tig0023655:+41403 None:intergenic
TGCTAATATACGTCTTCATT+AGG 0.391068 tig0023655:-35624 Msa1410470:three_prime_UTR
AACTTACTACACTAGCTGAT+AGG 0.394326 tig0023655:+38657 None:intergenic
TTGGCAGGAAGAAGATTTAT+GGG 0.394933 tig0023655:-37662 Msa1410470:intron
ATTATTCTTCTTTATGATCT+CGG 0.398338 tig0023655:-41576 Msa1410470:five_prime_UTR
GACCAGTCTAAAGGAGTTCC+TGG 0.404750 tig0023655:+36325 None:intergenic
CAAATCCCCGTTGTCACTTA+AGG 0.405474 tig0023655:+37321 None:intergenic
ATCCGTCCTTAAGTGACAAC+GGG 0.408908 tig0023655:-37327 Msa1410470:CDS
ATTGTATCGTATCGCCATTA+TGG 0.409503 tig0023655:-35423 Msa1410470:three_prime_UTR
AGAGGAGACTCTACAGGATT+GGG 0.412152 tig0023655:-39178 Msa1410470:CDS
TCTGGCTGTCTTTCTCAGAC+TGG 0.414517 tig0023655:+36125 None:intergenic
AACCTTCACGCAATGTATTC+CGG 0.415906 tig0023655:+40452 None:intergenic
GCATCTCAGGTATCATCAGC+TGG 0.417129 tig0023655:-38500 Msa1410470:CDS
CGAGCCCTCAAGGAGATGTT+TGG 0.417430 tig0023655:-35752 Msa1410470:CDS
CTGCTAATGAATCTGCAGAT+TGG 0.419350 tig0023655:-40504 Msa1410470:CDS
AGGGAGCGAGCGTGCATCTC+AGG 0.420236 tig0023655:-38513 Msa1410470:CDS
AGAAGATTCTTGTGTTACTT+AGG 0.420887 tig0023655:-40555 Msa1410470:CDS
GTTCCTGGTGCCTCCTGCAT+TGG 0.421307 tig0023655:+36340 None:intergenic
CAATGGAGAGACACTTGTTT+CGG 0.422658 tig0023655:+35496 None:intergenic
CCGTCAGTGGATGACCTTAG+AGG 0.426876 tig0023655:-36971 Msa1410470:CDS
GGCAACAGCTTGAGATCATC+TGG 0.430160 tig0023655:-36950 Msa1410470:CDS
AATTCCTTTACCTTCACAAA+AGG 0.433816 tig0023655:+39134 None:intergenic
AACTTTCTCCATAAACCATC+TGG 0.438525 tig0023655:+37061 None:intergenic
AACTAGAAGCCGGAGTTGTT+CGG 0.440145 tig0023655:-37167 Msa1410470:CDS
CTCTGTAAGTTTCTCTAGAA+CGG 0.444093 tig0023655:+39197 None:intergenic
TTCCCTGGCAGAACTTTCAA+TGG 0.446524 tig0023655:+38706 None:intergenic
CTATTTAACGAATGGGGCAT+TGG 0.449067 tig0023655:-35896 Msa1410470:CDS
AACTCTCTAATGCGTATGTT+GGG 0.451837 tig0023655:+37598 None:intergenic
TATGAAAAGCAGCTTGTTGA+TGG 0.452686 tig0023655:-36863 Msa1410470:CDS
AGACAGTCAAATTCGTCATC+TGG 0.453086 tig0023655:+35390 None:intergenic
CTGGAGAAGAGTTGTCGAAA+TGG 0.453784 tig0023655:-40609 Msa1410470:CDS
TCATTAGGAGTGTGTACAGC+AGG 0.453816 tig0023655:-35609 Msa1410470:three_prime_UTR
ATGGAGAGGACGCCATTCAA+TGG 0.453935 tig0023655:-37109 Msa1410470:CDS
TATCAGTGTTGCACCATAAA+CGG 0.454876 tig0023655:+35837 None:intergenic
TCAGTGTCCTGTCTGGTGTC+TGG 0.456424 tig0023655:+41395 None:intergenic
TCTGTAAGTTTCTCTAGAAC+GGG 0.458045 tig0023655:+39198 None:intergenic
TTCCCCTGAGACAGGAGAAA+TGG 0.463457 tig0023655:-37128 Msa1410470:CDS
GAAAAGGCTATTTAACGAAT+GGG 0.464097 tig0023655:-35903 Msa1410470:CDS
CAGAGGAGACTCTACAGGAT+TGG 0.465719 tig0023655:-39179 Msa1410470:CDS
GAAATTTCCTTCTCATTCAA+AGG 0.470020 tig0023655:+40526 None:intergenic
TTCTTGTGTTACTTAGGCTT+AGG 0.470717 tig0023655:-40549 Msa1410470:CDS
TGGGATTAGCTTGTTAATTG+AGG 0.472715 tig0023655:-40675 Msa1410470:five_prime_UTR
CTTCTTTGCAGTATTCATCA+AGG 0.474289 tig0023655:+37401 None:intergenic
CTGTCTCCACTATTATATTG+AGG 0.476344 tig0023655:+37568 None:intergenic
AAGAAGGTTGCCATATAAAC+CGG 0.478479 tig0023655:-38466 Msa1410470:CDS
CAATCTCTACATGCCATGTC+AGG 0.480188 tig0023655:-37220 Msa1410470:CDS
TCTCCATTTCTCCTGTCTCA+GGG 0.480908 tig0023655:+37125 None:intergenic
CAGTGGAAAGACATATACTA+TGG 0.482105 tig0023655:-39621 Msa1410470:CDS
CGCATACTGCAGCCTTGCTT+AGG 0.486895 tig0023655:-38267 Msa1410470:CDS
ATCTCACCAAATTATCAGAT+TGG 0.487669 tig0023655:-38811 Msa1410470:intron
AACGTGATCTTGCTGAATCA+AGG 0.488340 tig0023655:-37848 Msa1410470:CDS
TCCTTTGCCCAGAAATTCCC+TGG 0.488533 tig0023655:+38691 None:intergenic
TCAGAGTCCTCAAGCATTTG+TGG 0.489326 tig0023655:-37622 Msa1410470:CDS
TTGAAGTTAACGTGATTGTC+TGG 0.489517 tig0023655:+36107 None:intergenic
TGGAGAGGACGCCATTCAAT+GGG 0.490245 tig0023655:-37108 Msa1410470:CDS
TTACCAAATGTGTAGGCACT+TGG 0.492018 tig0023655:+40421 None:intergenic
ACAAACAGATTCCATTTACA+TGG 0.493660 tig0023655:-36200 Msa1410470:CDS
AGACAATCACGTTAACTTCA+AGG 0.495649 tig0023655:-36105 Msa1410470:intron
TTATGAAGCTTATGCGGAAG+AGG 0.496180 tig0023655:-35943 Msa1410470:CDS
TAACACGGCGAAGCTATTCA+TGG 0.498028 tig0023655:-35709 Msa1410470:CDS
TAATCAGTGTTGGAGGTAGC+AGG 0.499690 tig0023655:+38045 None:intergenic
CTTTACCTTCACAAAAGGAT+AGG 0.501285 tig0023655:+39139 None:intergenic
TAATGTAGTGATGTCTGATA+AGG 0.501558 tig0023655:-38124 Msa1410470:CDS
CTGGTACAACATAACCATAA+TGG 0.502481 tig0023655:+35409 None:intergenic
TGAAACAAGGCAGGTATATG+AGG 0.503530 tig0023655:-39802 Msa1410470:CDS
GGAAAGACATATACTATGGT+TGG 0.503643 tig0023655:-39617 Msa1410470:CDS
AACAATCCTCAATATAATAG+TGG 0.503991 tig0023655:-37574 Msa1410470:CDS
TGGAGAAGAGTTGTCGAAAT+GGG 0.504063 tig0023655:-40608 Msa1410470:CDS
TCTTTATGATCTCGGTGTGT+CGG 0.506170 tig0023655:-41568 Msa1410470:five_prime_UTR
GCCAGGGAATTTCTGGGCAA+AGG 0.507390 tig0023655:-38692 Msa1410470:CDS
GCTTAGGCCTTTGAATGAGA+AGG 0.507783 tig0023655:-40533 Msa1410470:CDS
AATACACATATCTATCTCAA+TGG 0.510126 tig0023655:+35479 None:intergenic
AGTTCTGCCAGGGAATTTCT+GGG 0.510390 tig0023655:-38698 Msa1410470:CDS
ATGACTGCTTCCCCTGAGAC+AGG 0.512104 tig0023655:-37136 Msa1410470:CDS
GAAAGATCAACAGATAGAAA+AGG 0.513788 tig0023655:-38004 Msa1410470:intron
TTTCTGAGGAAGAGAGGAAA+AGG 0.515753 tig0023655:-35919 Msa1410470:CDS
TCGAAATGGGAGAAGATGAA+TGG 0.517570 tig0023655:-40595 Msa1410470:CDS
ATTTGACATGTTTCCTGACA+TGG 0.518750 tig0023655:+37207 None:intergenic
AAGTCCAAACATCTCCTTGA+GGG 0.519271 tig0023655:+35748 None:intergenic
TGTTGCTGGGATGAAAGAAA+TGG 0.520014 tig0023655:-36897 Msa1410470:CDS
CATCTCAGGTATCATCAGCT+GGG 0.520906 tig0023655:-38499 Msa1410470:CDS
AAAGCAGCTTGTTGATGGTC+AGG 0.521553 tig0023655:-36858 Msa1410470:intron
AGACCATTGAAAGTTCTGCC+AGG 0.523244 tig0023655:-38709 Msa1410470:CDS
TGTTCAACATGACTCCGTGC+AGG 0.523415 tig0023655:+38207 None:intergenic
CAAAGCTACATAATCAGTGT+TGG 0.525785 tig0023655:+38035 None:intergenic
TTACGTGTCAGTGTCCTGTC+TGG 0.526016 tig0023655:+41388 None:intergenic
GACACAGTGTGAGAGCTCTT+CGG 0.528394 tig0023655:-35982 Msa1410470:intron
ACTTACTACACTAGCTGATA+GGG 0.529106 tig0023655:+38658 None:intergenic
CTTGCAGCTCAGAGACAAGT+AGG 0.530862 tig0023655:-38864 Msa1410470:intron
GAGAAGATGAATGGAGTTAG+TGG 0.531131 tig0023655:-40586 Msa1410470:CDS
GATCCAATGCAGGAGGCACC+AGG 0.532906 tig0023655:-36343 Msa1410470:CDS
TGAGGATTTGCTGCGCATGG+TGG 0.534211 tig0023655:-37823 Msa1410470:CDS
AACTGCAGAGACCAGTCTAA+AGG 0.537534 tig0023655:+36316 None:intergenic
AAAGAGTTGGCCAGGTTGGA+AGG 0.537609 tig0023655:-38081 Msa1410470:CDS
GTATATTAGCAATGCCACTT+TGG 0.538179 tig0023655:+35636 None:intergenic
TCTTGCTGAATCAAGGATTG+AGG 0.544535 tig0023655:-37841 Msa1410470:CDS
ATCACAAATTAACTAGAAGC+CGG 0.545574 tig0023655:-37177 Msa1410470:CDS
CCTAAACAAAAGAAAGAAGT+AGG 0.545806 tig0023655:+36228 None:intergenic
AGAGCAGGGACGAGCCCTCA+AGG 0.546310 tig0023655:-35762 Msa1410470:CDS
ACTTACAGAGGAGACTCTAC+AGG 0.547856 tig0023655:-39184 Msa1410470:CDS
TTGGATTGAATTCAAAGCGC+AGG 0.548324 tig0023655:-35877 Msa1410470:CDS
CTGAGGAATGTGAAAGATGT+AGG 0.548594 tig0023655:-36370 Msa1410470:CDS
GGAAAAGGCTATTTAACGAA+TGG 0.550100 tig0023655:-35904 Msa1410470:CDS
ATACTGCAGCCTTGCTTAGG+TGG 0.551117 tig0023655:-38264 Msa1410470:CDS
GATTAGCTTGTTAATTGAGG+TGG 0.551277 tig0023655:-40672 Msa1410470:five_prime_UTR
CAACCTCAGCTTACGAATGA+CGG 0.553205 tig0023655:+38424 None:intergenic
GGCTTTGACAGTATCTGGAG+GGG 0.554999 tig0023655:-37299 Msa1410470:CDS
CATTGCGTGTTGAATTTGGT+AGG 0.556021 tig0023655:-41722 None:intergenic
CGACCGTCATTCGTAAGCTG+AGG 0.556042 tig0023655:-38427 Msa1410470:intron
GGATCATCACGCAACCTAAG+TGG 0.556914 tig0023655:+39332 None:intergenic
AACTGAATCATTTGAAACAC+AGG 0.558277 tig0023655:+41461 None:intergenic
TGTAGGTGTTGATCCAATGC+AGG 0.558725 tig0023655:-36353 Msa1410470:CDS
GAGGATTTGCTGCGCATGGT+GGG 0.558929 tig0023655:-37822 Msa1410470:CDS
GTTCAACATGACTCCGTGCA+GGG 0.560044 tig0023655:+38208 None:intergenic
CAGTGTGAGAGCTCTTCGGC+GGG 0.560979 tig0023655:-35978 Msa1410470:CDS
CAATAGTTGCGAGGCTAGTG+AGG 0.563553 tig0023655:-35790 Msa1410470:CDS
AGCTACATAATCAGTGTTGG+AGG 0.564822 tig0023655:+38038 None:intergenic
AGAAGTTCGATGTGTCGAGT+TGG 0.565179 tig0023655:-37383 Msa1410470:CDS
AATACAACCCTCTAGAATGT+AGG 0.566519 tig0023655:+35448 None:intergenic
GACCATTGAAAGTTCTGCCA+GGG 0.568444 tig0023655:-38708 Msa1410470:CDS
GCATATGGGCAAACAAGCAG+TGG 0.571286 tig0023655:-39638 Msa1410470:CDS
AGGGGAAAATGGAACAAGCC+AGG 0.572223 tig0023655:-37281 Msa1410470:CDS
ACTATTAACCTACATTCTAG+AGG 0.572333 tig0023655:-35456 Msa1410470:three_prime_UTR
GAACTCTCTAATGCGTATGT+TGG 0.572921 tig0023655:+37597 None:intergenic
CTATTAACCTACATTCTAGA+GGG 0.574371 tig0023655:-35455 Msa1410470:three_prime_UTR
GGATTCCCTGGAAGACCAGA+TGG 0.574754 tig0023655:-37076 Msa1410470:CDS
CACCAGGAACTCCTTTAGAC+TGG 0.575102 tig0023655:-36327 Msa1410470:CDS
AAGAAAGAAGTAGGTCCTGT+GGG 0.577186 tig0023655:+36237 None:intergenic
GAAATCGCTCTTTCAGTAGT+CGG 0.577913 tig0023655:-39768 Msa1410470:CDS
AGAGGCTTTCTGAGGAAGAG+AGG 0.579952 tig0023655:-35925 Msa1410470:CDS
TGTGATGCTCCGAACAACTC+CGG 0.580662 tig0023655:+37158 None:intergenic
GCACTGACAACACTCCACTT+AGG 0.581250 tig0023655:-39346 Msa1410470:CDS
CTCCATTTCTCCTGTCTCAG+GGG 0.581535 tig0023655:+37126 None:intergenic
AGTGATGTCTGATAAGGCCT+TGG 0.583008 tig0023655:-38118 Msa1410470:CDS
TTCTATTGGAAGTCCGTCAG+TGG 0.593519 tig0023655:-36984 Msa1410470:CDS
TGGCTTTGACAGTATCTGGA+GGG 0.594075 tig0023655:-37300 Msa1410470:CDS
ACTGGTCTCTGCAGTTCAAG+AGG 0.598036 tig0023655:-36309 Msa1410470:CDS
CTTGAGATCATCTGGTGATG+AGG 0.598316 tig0023655:-36942 Msa1410470:CDS
TATGCGGAAGAGGCTTTCTG+AGG 0.600165 tig0023655:-35933 Msa1410470:CDS
GAATGCAGTAAGGGAAGACA+TGG 0.600216 tig0023655:-38321 Msa1410470:intron
TACCGGAATACATTGCGTGA+AGG 0.600495 tig0023655:-40454 Msa1410470:CDS
ATTTAACTTACCAAATGTGT+AGG 0.602058 tig0023655:+40414 None:intergenic
GACAGTGGAAGTATTCAAGA+TGG 0.602866 tig0023655:-37550 Msa1410470:intron
GCTTCACACCTCAGCTAACA+CGG 0.603431 tig0023655:-35724 Msa1410470:CDS
AGAAGTTACCACTAAAGCAC+AGG 0.604313 tig0023655:-38148 Msa1410470:CDS
CTAGCATTGCCACCTAAGCA+AGG 0.606325 tig0023655:+38255 None:intergenic
GGGTGACTGTGAAACAAGGC+AGG 0.609708 tig0023655:-39811 Msa1410470:CDS
ACAAGGCAGGTATATGAGGA+AGG 0.610187 tig0023655:-39798 Msa1410470:CDS
ATAAACCATCTGGTCTTCCA+GGG 0.610955 tig0023655:+37071 None:intergenic
AAAGAAAGAAGTAGGTCCTG+TGG 0.614224 tig0023655:+36236 None:intergenic
GATTGAGGATTTGCTGCGCA+TGG 0.614235 tig0023655:-37826 Msa1410470:CDS
TTTGCACTTTGAGCCCTGCA+CGG 0.615755 tig0023655:-38221 Msa1410470:CDS
TTCGGGGTGACTGTGAAACA+AGG 0.620796 tig0023655:-39815 Msa1410470:CDS
GAGGAGACTCTACAGGATTG+GGG 0.620881 tig0023655:-39177 Msa1410470:CDS
GCTATGTACCATTAACCCAC+AGG 0.622275 tig0023655:-36252 Msa1410470:CDS
TAGCTTCGCCGTGTTAGCTG+AGG 0.622747 tig0023655:+35716 None:intergenic
CCAGACACCAGACACCAGAC+AGG 0.623853 tig0023655:-41402 Msa1410470:five_prime_UTR
AAATGCTTATGAAGCTTATG+CGG 0.625303 tig0023655:-35949 Msa1410470:CDS
TACTACACTAGCTGATAGGG+TGG 0.625784 tig0023655:+38661 None:intergenic
CATGTAGAGATTGTTCATCA+TGG 0.628406 tig0023655:+37230 None:intergenic
ATCGCTCTTTCAGTAGTCGG+TGG 0.629355 tig0023655:-39765 Msa1410470:CDS
TCCCCGTTGTCACTTAAGGA+CGG 0.631420 tig0023655:+37325 None:intergenic
CCTCTAAGGTCATCCACTGA+CGG 0.638852 tig0023655:+36971 None:intergenic
TTGGCTTTGACAGTATCTGG+AGG 0.640008 tig0023655:-37301 Msa1410470:CDS
TTGCAGCACTCTGCATTACG+TGG 0.640783 tig0023655:+35810 None:intergenic
AACCTTAATTTGCAGCAAGG+AGG 0.643967 tig0023655:+35355 None:intergenic
GCTGGGGTGAGATTGAAAGA+AGG 0.644962 tig0023655:-38482 Msa1410470:CDS
CATTAGGAGTGTGTACAGCA+GGG 0.646177 tig0023655:-35608 Msa1410470:three_prime_UTR
ACAAACCTTAATTTGCAGCA+AGG 0.646264 tig0023655:+35352 None:intergenic
CAATATAATAGTGGAGACAG+TGG 0.646811 tig0023655:-37565 Msa1410470:CDS
GATCCGTCCTTAAGTGACAA+CGG 0.648355 tig0023655:-37328 Msa1410470:CDS
ATCTCAGGTATCATCAGCTG+GGG 0.651883 tig0023655:-38498 Msa1410470:CDS
AAAAGGCTATTTAACGAATG+GGG 0.654647 tig0023655:-35902 Msa1410470:CDS
AGGATTTGCTGCGCATGGTG+GGG 0.662984 tig0023655:-37821 Msa1410470:CDS
GTTGGGACCACAAATGCTTG+AGG 0.665970 tig0023655:+37615 None:intergenic
CTGAGACAGGAGAAATGGAG+AGG 0.668611 tig0023655:-37123 Msa1410470:CDS
ACAGTGTGAGAGCTCTTCGG+CGG 0.670786 tig0023655:-35979 Msa1410470:intron
TTGGCAGACAGAGTATTTCG+GGG 0.673305 tig0023655:-39831 Msa1410470:intron
TCGAAAGAGTAAGTAAACTC+CGG 0.675211 tig0023655:+38447 None:intergenic
TGAATCATTTGAAACACAGG+AGG 0.678773 tig0023655:+41464 None:intergenic
AGGAGACTCTACAGGATTGG+GGG 0.680080 tig0023655:-39176 Msa1410470:CDS
AGGTGTTGATCCAATGCAGG+AGG 0.686174 tig0023655:-36350 Msa1410470:CDS
AACAGATTCCATTTACATGG+AGG 0.691503 tig0023655:-36197 Msa1410470:CDS
AGAGTGCTGCAATAGTTGCG+AGG 0.694058 tig0023655:-35799 Msa1410470:CDS
TAGGTTGCGTGATGATCCTG+AGG 0.705593 tig0023655:-39327 Msa1410470:intron
AGGAGACAGATAGAAAACTG+AGG 0.728366 tig0023655:-36387 Msa1410470:CDS
TAAGTCCAAACATCTCCTTG+AGG 0.730477 tig0023655:+35747 None:intergenic
CGTTCTAGAGAAACTTACAG+AGG 0.745619 tig0023655:-39196 Msa1410470:CDS
TCCGTCCTTAAGTGACAACG+GGG 0.757636 tig0023655:-37326 Msa1410470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTCTATATATCTTTTT+CGG - tig0023655:35426-35445 Msa1410470:three_prime_UTR 10.0%
!! TAATTATTAATATTAATGCA+AGG + tig0023655:39275-39294 None:intergenic 10.0%
!! TATTAATAATTATCTTGATT+TGG - tig0023655:39283-39302 Msa1410470:intron 10.0%
!!! TCTATTCTAAAAATCATAAT+TGG - tig0023655:35745-35764 Msa1410470:CDS 15.0%
!! TCATAAATTAATCATAATGA+TGG + tig0023655:36153-36172 None:intergenic 15.0%
!! CTAAATCAATTTACATAAAT+TGG - tig0023655:36873-36892 Msa1410470:CDS 15.0%
!!! TATAAAGATATCTTTTTTAG+AGG + tig0023655:40290-40309 None:intergenic 15.0%
!! ATTATTCTTCTTTATGATCT+CGG - tig0023655:35388-35407 Msa1410470:three_prime_UTR 20.0%
!!! AAAGTAACAGATTTTTTTAC+TGG + tig0023655:35682-35701 None:intergenic 20.0%
!!! TTAGAATAGAAAACTTTTTC+TGG + tig0023655:35735-35754 None:intergenic 20.0%
!! TTAATGTTGATATGAACATT+TGG - tig0023655:36828-36847 Msa1410470:intron 20.0%
!! TCAATTTACATAAATTGGTA+AGG - tig0023655:36878-36897 Msa1410470:CDS 20.0%
!!! TTTGACAGTTTTTTTTTTGA+AGG + tig0023655:36927-36946 None:intergenic 20.0%
!!! ATATTTTTGACTATGCAAAA+AGG - tig0023655:37393-37412 Msa1410470:CDS 20.0%
!!! TATTTTTGACTATGCAAAAA+GGG - tig0023655:37394-37413 Msa1410470:CDS 20.0%
!!! TGAATGCCTTTTAAATATAT+TGG - tig0023655:37660-37679 Msa1410470:intron 20.0%
!! ATCAGTCCAATATATTTAAA+AGG + tig0023655:37669-37688 None:intergenic 20.0%
!! GATACAAGTTTAATACATAA+AGG - tig0023655:37691-37710 Msa1410470:intron 20.0%
!!! TAGCTTTCTTGTTATATATA+TGG - tig0023655:37857-37876 Msa1410470:CDS 20.0%
!! AAAATAAATTAAACTTCCGA+GGG + tig0023655:38575-38594 None:intergenic 20.0%
!!! ACGAATTTTAATTATTCAGA+TGG - tig0023655:39066-39085 Msa1410470:intron 20.0%
!! TTTAATTATTCAGATGGATA+AGG - tig0023655:39072-39091 Msa1410470:intron 20.0%
!! CTAACAAATAAAATAATGAC+CGG + tig0023655:39521-39540 None:intergenic 20.0%
!! TTCAATCCATTAAATTTAGA+TGG - tig0023655:39924-39943 Msa1410470:intron 20.0%
!! ATGAAATTCAAGAAACAATA+AGG + tig0023655:40154-40173 None:intergenic 20.0%
!!! AAAATTTTGTTACCAGATAT+AGG - tig0023655:40340-40359 Msa1410470:intron 20.0%
!! ACATGATTATATTTATATGC+AGG - tig0023655:40476-40495 Msa1410470:CDS 20.0%
!!! TGATATATTTAGAATCTAAG+TGG - tig0023655:40918-40937 Msa1410470:intron 20.0%
!! AAAACAAAAAAGAATGACTA+AGG + tig0023655:41302-41321 None:intergenic 20.0%
!!! TCTCTGTTTTTCAAAATCAT+CGG + tig0023655:35605-35624 None:intergenic 25.0%
!!! ATTTTGAAAAACAGAGAACA+AGG - tig0023655:35608-35627 Msa1410470:three_prime_UTR 25.0%
! ATAGTGTAAACTGAAAAACA+AGG - tig0023655:35635-35654 Msa1410470:three_prime_UTR 25.0%
! AAAAGAGAAAAAGTGATGAT+GGG + tig0023655:35814-35833 None:intergenic 25.0%
! AAAAAGAGAAAAAGTGATGA+TGG + tig0023655:35815-35834 None:intergenic 25.0%
!!! TATAACAGAAGTCTTGTTTT+TGG - tig0023655:35944-35963 Msa1410470:CDS 25.0%
!! ACGTTTTTATCATAGTTAGT+TGG + tig0023655:35985-36004 None:intergenic 25.0%
! TTATTAACTACCGCAATTAA+TGG - tig0023655:36098-36117 Msa1410470:intron 25.0%
! TATTAACTACCGCAATTAAT+GGG - tig0023655:36099-36118 Msa1410470:intron 25.0%
! TAACAAAAACCCATTAATTG+CGG + tig0023655:36111-36130 None:intergenic 25.0%
! TAAAAGAGAAAAAGTGAAAC+GGG + tig0023655:36246-36265 None:intergenic 25.0%
! CTAAAAGAGAAAAAGTGAAA+CGG + tig0023655:36247-36266 None:intergenic 25.0%
!!! TTTTTCTCTTTTAGGAAACA+TGG - tig0023655:36253-36272 Msa1410470:CDS 25.0%
!!! TTTTCTCTTTTAGGAAACAT+GGG - tig0023655:36254-36273 Msa1410470:CDS 25.0%
!! ATGATACTACAATTTTGTAC+CGG - tig0023655:36493-36512 Msa1410470:intron 25.0%
!! ATTTAACTTACCAAATGTGT+AGG + tig0023655:36553-36572 None:intergenic 25.0%
! AAGTTAAGACCATGTAAATT+GGG + tig0023655:36798-36817 None:intergenic 25.0%
! AAAGTTAAGACCATGTAAAT+TGG + tig0023655:36799-36818 None:intergenic 25.0%
! TCGATATAAATATCCAAGTT+TGG + tig0023655:36969-36988 None:intergenic 25.0%
! ATTATAACACATCAGATTGA+TGG - tig0023655:37061-37080 Msa1410470:CDS 25.0%
!!! TTCTGAATTTTTGTTGTGAT+TGG - tig0023655:37106-37125 Msa1410470:CDS 25.0%
! TATGTTAATCAAAAAGTGGA+AGG + tig0023655:37274-37293 None:intergenic 25.0%
!!! TTCCACTTTTTGATTAACAT+AGG - tig0023655:37273-37292 Msa1410470:CDS 25.0%
! TATTTAACATTGGATGCAAT+GGG + tig0023655:37900-37919 None:intergenic 25.0%
! TTGAAAAGTAGTGACTATAA+CGG - tig0023655:37990-38009 Msa1410470:intron 25.0%
! TTTAAATCCATCACTTATTC+AGG - tig0023655:38337-38356 Msa1410470:intron 25.0%
! TTAAATCCATCACTTATTCA+GGG - tig0023655:38338-38357 Msa1410470:intron 25.0%
! CAAAATAAATTAAACTTCCG+AGG + tig0023655:38576-38595 None:intergenic 25.0%
! GAAAGATCAGATATCTAAAA+AGG - tig0023655:39165-39184 Msa1410470:CDS 25.0%
!!! AATAATTATCTTGATTTGGC+AGG - tig0023655:39287-39306 Msa1410470:intron 25.0%
! AACAATCCTCAATATAATAG+TGG - tig0023655:39390-39409 Msa1410470:CDS 25.0%
! TATACAGGAAGGAATATAAA+AGG + tig0023655:39445-39464 None:intergenic 25.0%
! AAACTATTTACTATACAGGA+AGG + tig0023655:39456-39475 None:intergenic 25.0%
! TTCCTGTATAGTAAATAGTT+TGG - tig0023655:39455-39474 Msa1410470:intron 25.0%
! TACCAAACTATTTACTATAC+AGG + tig0023655:39460-39479 None:intergenic 25.0%
! GTTGAACCATCTAAATTTAA+TGG + tig0023655:39933-39952 None:intergenic 25.0%
!!! TAAGTCACTTCTTTTTTTAG+AGG - tig0023655:40206-40225 Msa1410470:intron 25.0%
!!! TATAGAGGTATCTTTTTTAG+AGG + tig0023655:40321-40340 None:intergenic 25.0%
!! CTGGTAACAAAATTTTATAG+AGG + tig0023655:40336-40355 None:intergenic 25.0%
! TATTAGCAAACATGGATATA+TGG - tig0023655:40449-40468 Msa1410470:CDS 25.0%
! ATTAGCAAACATGGATATAT+GGG - tig0023655:40450-40469 Msa1410470:CDS 25.0%
! AAAAAGAGATAATTGAACTG+TGG - tig0023655:40682-40701 Msa1410470:five_prime_UTR 25.0%
!!! CTACTTCTTTCTTTTGTTTA+GGG - tig0023655:40737-40756 Msa1410470:intron 25.0%
!!! TACTTCTTTCTTTTGTTTAG+GGG - tig0023655:40738-40757 Msa1410470:intron 25.0%
! CATCAAAAAATGTTTCTTTC+AGG + tig0023655:40815-40834 None:intergenic 25.0%
! TCACATACTGAAATAAAAGT+AGG + tig0023655:40901-40920 None:intergenic 25.0%
! AATACACATATCTATCTCAA+TGG + tig0023655:41488-41507 None:intergenic 25.0%
! AACTGAATCATTTGAAACAC+AGG + tig0023655:35506-35525 None:intergenic 30.0%
TGTAAACTGAAAAACAAGGT+AGG - tig0023655:35639-35658 Msa1410470:three_prime_UTR 30.0%
! TTGTTCTCAAGCATTGTTTA+AGG - tig0023655:35700-35719 Msa1410470:CDS 30.0%
TCATAATTGGTTACTGTAGA+AGG - tig0023655:35758-35777 Msa1410470:CDS 30.0%
! TGAAGCTTTGTATCAAAGAA+TGG - tig0023655:35853-35872 Msa1410470:CDS 30.0%
!!! TAGCATTCTGTTTTTGTCTT+TGG - tig0023655:36012-36031 Msa1410470:intron 30.0%
! TGGTCTTTCTTTTTCTTAGT+TGG - tig0023655:36032-36051 Msa1410470:intron 30.0%
! TTTTTGTTACCTTCTTCGTT+TGG - tig0023655:36122-36141 Msa1410470:CDS 30.0%
!!! CGTTTCACTTTTTCTCTTTT+AGG - tig0023655:36245-36264 Msa1410470:CDS 30.0%
!!! AACATGGGTTGTTTTTGAAA+TGG - tig0023655:36269-36288 Msa1410470:CDS 30.0%
!!! ACATGGGTTGTTTTTGAAAT+GGG - tig0023655:36270-36289 Msa1410470:CDS 30.0%
TTAATTGAGGTGGAAAAAGA+GGG - tig0023655:36302-36321 Msa1410470:CDS 30.0%
GTTTGGAAGTGAGAAAAAAT+GGG - tig0023655:36324-36343 Msa1410470:CDS 30.0%
!! AGAAGATTCTTGTGTTACTT+AGG - tig0023655:36409-36428 Msa1410470:intron 30.0%
GAAATTTCCTTCTCATTCAA+AGG + tig0023655:36441-36460 None:intergenic 30.0%
!! GGTTTTGATACTTCTAAGTT+CGG + tig0023655:36695-36714 None:intergenic 30.0%
! AAAAGAGTACATCTAAGCTA+GGG + tig0023655:36775-36794 None:intergenic 30.0%
! TACTCTTTTCCCAATTTACA+TGG - tig0023655:36786-36805 Msa1410470:intron 30.0%
!! GTCAATTTTTATTTGCCTGT+TGG - tig0023655:36850-36869 Msa1410470:intron 30.0%
! TGTAAATTGATTTAGCCAAC+AGG + tig0023655:36868-36887 None:intergenic 30.0%
!! TTGTTTTTCTTCTCCAAACT+TGG - tig0023655:36953-36972 Msa1410470:CDS 30.0%
CACCTATGTTAATCAAAAAG+TGG + tig0023655:37278-37297 None:intergenic 30.0%
!! TCAGCAAGTATTTTTGCATA+TGG - tig0023655:37311-37330 Msa1410470:CDS 30.0%
!! CAGCAAGTATTTTTGCATAT+GGG - tig0023655:37312-37331 Msa1410470:CDS 30.0%
! AACATAGTGCTATTAACACA+AGG - tig0023655:37502-37521 Msa1410470:intron 30.0%
AATTCCTTTACCTTCACAAA+AGG + tig0023655:37833-37852 None:intergenic 30.0%
! TTTTGTGAAGGTAAAGGAAT+TGG - tig0023655:37832-37851 Msa1410470:CDS 30.0%
CTATTTAACATTGGATGCAA+TGG + tig0023655:37901-37920 None:intergenic 30.0%
TTGCATCCAATGTTAAATAG+CGG - tig0023655:37901-37920 Msa1410470:intron 30.0%
! ATCTTGAACTCTTTTCATTC+AGG + tig0023655:38135-38154 None:intergenic 30.0%
ATCTCACCAAATTATCAGAT+TGG - tig0023655:38153-38172 Msa1410470:CDS 30.0%
CACATACCAATCTGATAATT+TGG + tig0023655:38162-38181 None:intergenic 30.0%
CTCTATTAACTGAAGTCTAT+CGG + tig0023655:38217-38236 None:intergenic 30.0%
TAAATCCATCACTTATTCAG+GGG - tig0023655:38339-38358 Msa1410470:intron 30.0%
!! TCTGCAGAATTTTGTTGATT+TGG - tig0023655:38427-38446 Msa1410470:intron 30.0%
!!! AGAATTTTGTTGATTTGGCA+GGG - tig0023655:38432-38451 Msa1410470:CDS 30.0%
TAAGTAAACTCCGGTTTATA+TGG + tig0023655:38511-38530 None:intergenic 30.0%
TAATGTAGTGATGTCTGATA+AGG - tig0023655:38840-38859 Msa1410470:CDS 30.0%
GAAAGATCAACAGATAGAAA+AGG - tig0023655:38960-38979 Msa1410470:intron 30.0%
TTATCAACATGTAAGGAGTA+AGG + tig0023655:39045-39064 None:intergenic 30.0%
ATTCGTGTTATCAACATGTA+AGG + tig0023655:39052-39071 None:intergenic 30.0%
TCAGATGGATAAGGAAATTA+AGG - tig0023655:39081-39100 Msa1410470:intron 30.0%
ATCACAAATTAACTAGAAGC+CGG - tig0023655:39787-39806 Msa1410470:CDS 30.0%
! ATGGTTCAACAAGATTTTCA+AGG - tig0023655:39943-39962 Msa1410470:intron 30.0%
TTCCTAGATATTAGCAAACA+TGG - tig0023655:40441-40460 Msa1410470:CDS 30.0%
! ATCCATGTTTGCTAATATCT+AGG + tig0023655:40446-40465 None:intergenic 30.0%
! TCATTCTTTTCTGAATTGCA+GGG - tig0023655:40552-40571 Msa1410470:CDS 30.0%
CCTAAACAAAAGAAAGAAGT+AGG + tig0023655:40739-40758 None:intergenic 30.0%
!! CCTACTTCTTTCTTTTGTTT+AGG - tig0023655:40736-40755 Msa1410470:intron 30.0%
ACAAACAGATTCCATTTACA+TGG - tig0023655:40764-40783 Msa1410470:intron 30.0%
!! TGTTGACATGTGTTTGTTTT+GGG - tig0023655:40960-40979 Msa1410470:intron 30.0%
AAATGCTTATGAAGCTTATG+CGG - tig0023655:41015-41034 Msa1410470:intron 30.0%
GAAAAGGCTATTTAACGAAT+GGG - tig0023655:41061-41080 Msa1410470:intron 30.0%
AAAAGGCTATTTAACGAATG+GGG - tig0023655:41062-41081 Msa1410470:intron 30.0%
TGCTAATATACGTCTTCATT+AGG - tig0023655:41340-41359 Msa1410470:five_prime_UTR 30.0%
ATACAAACTACTCACTTTAG+AGG - tig0023655:41436-41455 Msa1410470:five_prime_UTR 30.0%
ACTATTAACCTACATTCTAG+AGG - tig0023655:41508-41527 Msa1410470:five_prime_UTR 30.0%
CTATTAACCTACATTCTAGA+GGG - tig0023655:41509-41528 Msa1410470:five_prime_UTR 30.0%
! TTTTAATCATTTTCCTCCTC+TGG - tig0023655:41660-41679 Msa1410470:five_prime_UTR 30.0%
! ACTTCTTTTTCTTCAGATCG+TGG - tig0023655:35267-35286 Msa1410470:three_prime_UTR 35.0%
! TGAATCATTTGAAACACAGG+AGG + tig0023655:35503-35522 None:intergenic 35.0%
TGAAAAACAGAGAACAAGGA+TGG - tig0023655:35612-35631 Msa1410470:three_prime_UTR 35.0%
! TTCTCAAGCATTGTTTAAGG+TGG - tig0023655:35703-35722 Msa1410470:CDS 35.0%
AATTGGTTACTGTAGAAGGA+AGG - tig0023655:35762-35781 Msa1410470:CDS 35.0%
GGTTTCAAATACATGAGTTC+TGG - tig0023655:35783-35802 Msa1410470:CDS 35.0%
ATGGATTTACCAAACGAAGA+AGG + tig0023655:36134-36153 None:intergenic 35.0%
!! TGGGATTAGCTTGTTAATTG+AGG - tig0023655:36289-36308 Msa1410470:CDS 35.0%
!! GATTAGCTTGTTAATTGAGG+TGG - tig0023655:36292-36311 Msa1410470:CDS 35.0%
GTTAATTGAGGTGGAAAAAG+AGG - tig0023655:36301-36320 Msa1410470:CDS 35.0%
GGTTTGGAAGTGAGAAAAAA+TGG - tig0023655:36323-36342 Msa1410470:CDS 35.0%
!! TTCTTGTGTTACTTAGGCTT+AGG - tig0023655:36415-36434 Msa1410470:intron 35.0%
TGCTAATGAATCTGCAGATT+GGG - tig0023655:36461-36480 Msa1410470:intron 35.0%
TTGATACTTCTAAGTTCGGT+CGG + tig0023655:36691-36710 None:intergenic 35.0%
! GAAAAGAGTACATCTAAGCT+AGG + tig0023655:36776-36795 None:intergenic 35.0%
!! TTTTGTTGTGATTGGCACTT+TGG - tig0023655:37114-37133 Msa1410470:CDS 35.0%
GTTAATCAAAAAGTGGAAGG+TGG + tig0023655:37271-37290 None:intergenic 35.0%
CAGTGGAAAGACATATACTA+TGG - tig0023655:37343-37362 Msa1410470:CDS 35.0%
GGAAAGACATATACTATGGT+TGG - tig0023655:37347-37366 Msa1410470:CDS 35.0%
!! ATTTAAAAGGCATTCACCTC+AGG + tig0023655:37656-37675 None:intergenic 35.0%
! GTTTTCCCTTTTTGTTAGAG+AGG - tig0023655:37742-37761 Msa1410470:intron 35.0%
!! TCTGTAAGTTTCTCTAGAAC+GGG + tig0023655:37769-37788 None:intergenic 35.0%
! CTCTGTAAGTTTCTCTAGAA+CGG + tig0023655:37770-37789 None:intergenic 35.0%
CTTTACCTTCACAAAAGGAT+AGG + tig0023655:37828-37847 None:intergenic 35.0%
! CTATCCTTTTGTGAAGGTAA+AGG - tig0023655:37826-37845 Msa1410470:CDS 35.0%
TAATTGCAGATCGCAGAAAA+TGG + tig0023655:38055-38074 None:intergenic 35.0%
AGAACTTTCAATGGTCTGAA+AGG + tig0023655:38252-38271 None:intergenic 35.0%
ACTTACTACACTAGCTGATA+GGG + tig0023655:38309-38328 None:intergenic 35.0%
AACTTACTACACTAGCTGAT+AGG + tig0023655:38310-38329 None:intergenic 35.0%
TTTATCCCCTGAATAAGTGA+TGG + tig0023655:38347-38366 None:intergenic 35.0%
ATTCAGGGGATAAAATAGTC+AGG - tig0023655:38353-38372 Msa1410470:intron 35.0%
TTCAGGGGATAAAATAGTCA+GGG - tig0023655:38354-38373 Msa1410470:intron 35.0%
!!! CAGAATTTTGTTGATTTGGC+AGG - tig0023655:38431-38450 Msa1410470:CDS 35.0%
AAGAAGGTTGCCATATAAAC+CGG - tig0023655:38498-38517 Msa1410470:CDS 35.0%
TCGAAAGAGTAAGTAAACTC+CGG + tig0023655:38520-38539 None:intergenic 35.0%
TAATGTGTCTGAATGCAGTA+AGG - tig0023655:38633-38652 Msa1410470:intron 35.0%
AATGTGTCTGAATGCAGTAA+GGG - tig0023655:38634-38653 Msa1410470:intron 35.0%
TACATTAACCTGTGCTTTAG+TGG + tig0023655:38827-38846 None:intergenic 35.0%
! TTTTTGCAATTGCTTGACCA+AGG + tig0023655:38866-38885 None:intergenic 35.0%
CAAGCAATTGCAAAAAGAGT+TGG - tig0023655:38870-38889 Msa1410470:intron 35.0%
CAAAGCTACATAATCAGTGT+TGG + tig0023655:38932-38951 None:intergenic 35.0%
TTTGGCAGGAAGAAGATTTA+TGG - tig0023655:39301-39320 Msa1410470:intron 35.0%
TTGGCAGGAAGAAGATTTAT+GGG - tig0023655:39302-39321 Msa1410470:intron 35.0%
AACTCTCTAATGCGTATGTT+GGG + tig0023655:39369-39388 None:intergenic 35.0%
CTGTCTCCACTATTATATTG+AGG + tig0023655:39399-39418 None:intergenic 35.0%
! CAATATAATAGTGGAGACAG+TGG - tig0023655:39399-39418 Msa1410470:CDS 35.0%
GAGTAGAATTGAATGATGTC+CGG - tig0023655:39499-39518 Msa1410470:intron 35.0%
CTTCTTTGCAGTATTCATCA+AGG + tig0023655:39566-39585 None:intergenic 35.0%
TCAAATGTGTAGACATTTCC+TGG + tig0023655:39704-39723 None:intergenic 35.0%
CATGTAGAGATTGTTCATCA+TGG + tig0023655:39737-39756 None:intergenic 35.0%
ATTTGACATGTTTCCTGACA+TGG + tig0023655:39760-39779 None:intergenic 35.0%
!!! CCTTTTTCAAACCCATTGAA+TGG + tig0023655:39870-39889 None:intergenic 35.0%
! CCATTCAATGGGTTTGAAAA+AGG - tig0023655:39867-39886 Msa1410470:intron 35.0%
AACTTTCTCCATAAACCATC+TGG + tig0023655:39906-39925 None:intergenic 35.0%
AACGATTCTCAGTCTTCTAT+TGG - tig0023655:39966-39985 Msa1410470:intron 35.0%
!! TATGAAAAGCAGCTTGTTGA+TGG - tig0023655:40101-40120 Msa1410470:intron 35.0%
CATCAAGATGTAGATTGTAG+TGG + tig0023655:40513-40532 None:intergenic 35.0%
CTGCAATTCAGAAAAGAATG+AGG + tig0023655:40553-40572 None:intergenic 35.0%
! CTCATTCTTTTCTGAATTGC+AGG - tig0023655:40551-40570 Msa1410470:CDS 35.0%
AACAGATTCCATTTACATGG+AGG - tig0023655:40767-40786 Msa1410470:intron 35.0%
TTGAAGTTAACGTGATTGTC+TGG + tig0023655:40860-40879 None:intergenic 35.0%
AGACAATCACGTTAACTTCA+AGG - tig0023655:40859-40878 Msa1410470:intron 35.0%
AAACAAACACATGTCAACAC+AGG + tig0023655:40959-40978 None:intergenic 35.0%
!! GTGTTGACATGTGTTTGTTT+TGG - tig0023655:40959-40978 Msa1410470:intron 35.0%
GGAAAAGGCTATTTAACGAA+TGG - tig0023655:41060-41079 Msa1410470:intron 35.0%
TATCAGTGTTGCACCATAAA+CGG + tig0023655:41130-41149 None:intergenic 35.0%
! GTATATTAGCAATGCCACTT+TGG + tig0023655:41331-41350 None:intergenic 35.0%
!! AATACAACCCTCTAGAATGT+AGG + tig0023655:41519-41538 None:intergenic 35.0%
ATTGTATCGTATCGCCATTA+TGG - tig0023655:41541-41560 Msa1410470:five_prime_UTR 35.0%
CTGGTACAACATAACCATAA+TGG + tig0023655:41558-41577 None:intergenic 35.0%
!! ACAAACCTTAATTTGCAGCA+AGG + tig0023655:41615-41634 None:intergenic 35.0%
!!! TGTTTTAATATGTCCAGAGG+AGG + tig0023655:41676-41695 None:intergenic 35.0%
!!! CGATGTTTTAATATGTCCAG+AGG + tig0023655:41679-41698 None:intergenic 35.0%
! TCTTTATGATCTCGGTGTGT+CGG - tig0023655:35396-35415 Msa1410470:three_prime_UTR 40.0%
!! AAGGTAGGACCTGTTTTGTT+AGG - tig0023655:35654-35673 Msa1410470:three_prime_UTR 40.0%
!! AGGTAGGACCTGTTTTGTTA+GGG - tig0023655:35655-35674 Msa1410470:three_prime_UTR 40.0%
TTACTGGTCCCTAACAAAAC+AGG + tig0023655:35666-35685 None:intergenic 40.0%
! CAAATACATGAGTTCTGGTG+TGG - tig0023655:35788-35807 Msa1410470:CDS 40.0%
GAAAAAATGGGAGCTATTGC+TGG - tig0023655:36336-36355 Msa1410470:CDS 40.0%
TGGAGAAGAGTTGTCGAAAT+GGG - tig0023655:36356-36375 Msa1410470:CDS 40.0%
TCGAAATGGGAGAAGATGAA+TGG - tig0023655:36369-36388 Msa1410470:CDS 40.0%
GAGAAGATGAATGGAGTTAG+TGG - tig0023655:36378-36397 Msa1410470:CDS 40.0%
CTGCTAATGAATCTGCAGAT+TGG - tig0023655:36460-36479 Msa1410470:intron 40.0%
AACCTTCACGCAATGTATTC+CGG + tig0023655:36515-36534 None:intergenic 40.0%
TTTCCAAGTGCCTACACATT+TGG - tig0023655:36540-36559 Msa1410470:intron 40.0%
TTACCAAATGTGTAGGCACT+TGG + tig0023655:36546-36565 None:intergenic 40.0%
TGATACTTCTAAGTTCGGTC+GGG + tig0023655:36690-36709 None:intergenic 40.0%
AGTCTTAATCCTCAGTTCCA+GGG + tig0023655:36724-36743 None:intergenic 40.0%
! CTTTGGCAGACAGAGTATTT+CGG - tig0023655:37131-37150 Msa1410470:CDS 40.0%
! TTTGGCAGACAGAGTATTTC+GGG - tig0023655:37132-37151 Msa1410470:CDS 40.0%
TGAAACAAGGCAGGTATATG+AGG - tig0023655:37162-37181 Msa1410470:CDS 40.0%
GAAATCGCTCTTTCAGTAGT+CGG - tig0023655:37196-37215 Msa1410470:CDS 40.0%
GCTTCAGTATCATTGTTCTC+TGG - tig0023655:37461-37480 Msa1410470:intron 40.0%
!! CGTTCTAGAGAAACTTACAG+AGG - tig0023655:37768-37787 Msa1410470:intron 40.0%
ATAGCGCCGCTATTTAACAT+TGG + tig0023655:37910-37929 None:intergenic 40.0%
TCAGGGGATAAAATAGTCAG+GGG - tig0023655:38355-38374 Msa1410470:intron 40.0%
AGAAGTTACCACTAAAGCAC+AGG - tig0023655:38816-38835 Msa1410470:CDS 40.0%
AATTGCAAAAAGAGTTGGCC+AGG - tig0023655:38875-38894 Msa1410470:intron 40.0%
! AGCTACATAATCAGTGTTGG+AGG + tig0023655:38929-38948 None:intergenic 40.0%
AACGTGATCTTGCTGAATCA+AGG - tig0023655:39116-39135 Msa1410470:intron 40.0%
TCTTGCTGAATCAAGGATTG+AGG - tig0023655:39123-39142 Msa1410470:intron 40.0%
GAACTCTCTAATGCGTATGT+TGG + tig0023655:39370-39389 None:intergenic 40.0%
!! GACAGTGGAAGTATTCAAGA+TGG - tig0023655:39414-39433 Msa1410470:CDS 40.0%
!! GATTTGGCTTTGACAGTATC+TGG - tig0023655:39660-39679 Msa1410470:intron 40.0%
! ATAAACCATCTGGTCTTCCA+GGG + tig0023655:39896-39915 None:intergenic 40.0%
! AGCATCCATACTTTTGTTGC+TGG - tig0023655:40053-40072 Msa1410470:intron 40.0%
! GCATCCATACTTTTGTTGCT+GGG - tig0023655:40054-40073 Msa1410470:intron 40.0%
TCATCCCAGCAACAAAAGTA+TGG + tig0023655:40061-40080 None:intergenic 40.0%
TGTTGCTGGGATGAAAGAAA+TGG - tig0023655:40067-40086 Msa1410470:intron 40.0%
GTTACGACAAGTCCTATATC+TGG + tig0023655:40355-40374 None:intergenic 40.0%
GACACAGATACGATACTACA+TGG + tig0023655:40402-40421 None:intergenic 40.0%
GCTAATATCTAGGAAACCCA+GGG + tig0023655:40436-40455 None:intergenic 40.0%
TGCTAATATCTAGGAAACCC+AGG + tig0023655:40437-40456 None:intergenic 40.0%
AGGAGACAGATAGAAAACTG+AGG - tig0023655:40577-40596 Msa1410470:CDS 40.0%
CTGAGGAATGTGAAAGATGT+AGG - tig0023655:40594-40613 Msa1410470:CDS 40.0%
AAGAAAGAAGTAGGTCCTGT+GGG + tig0023655:40730-40749 None:intergenic 40.0%
AAAGAAAGAAGTAGGTCCTG+TGG + tig0023655:40731-40750 None:intergenic 40.0%
AAGCTCTACCTCCATGTAAA+TGG + tig0023655:40778-40797 None:intergenic 40.0%
TTATGAAGCTTATGCGGAAG+AGG - tig0023655:41021-41040 Msa1410470:intron 40.0%
! TTTCTGAGGAAGAGAGGAAA+AGG - tig0023655:41045-41064 Msa1410470:intron 40.0%
CTATTTAACGAATGGGGCAT+TGG - tig0023655:41068-41087 Msa1410470:intron 40.0%
TTGGATTGAATTCAAAGCGC+AGG - tig0023655:41087-41106 Msa1410470:intron 40.0%
AAGTCCAAACATCTCCTTGA+GGG + tig0023655:41219-41238 None:intergenic 40.0%
TAAGTCCAAACATCTCCTTG+AGG + tig0023655:41220-41239 None:intergenic 40.0%
!!! TTTGTTTTGCGTCTCCAAAG+TGG - tig0023655:41314-41333 Msa1410470:intron 40.0%
CAATGGAGAGACACTTGTTT+CGG + tig0023655:41471-41490 None:intergenic 40.0%
AGACAGTCAAATTCGTCATC+TGG + tig0023655:41577-41596 None:intergenic 40.0%
TTCCTCCTTGCTGCAAATTA+AGG - tig0023655:41607-41626 Msa1410470:five_prime_UTR 40.0%
!! AACCTTAATTTGCAGCAAGG+AGG + tig0023655:41612-41631 None:intergenic 40.0%
TGAGGTGGAAAAAGAGGGTT+TGG - tig0023655:36307-36326 Msa1410470:CDS 45.0%
CTGGAGAAGAGTTGTCGAAA+TGG - tig0023655:36355-36374 Msa1410470:CDS 45.0%
GCTTAGGCCTTTGAATGAGA+AGG - tig0023655:36431-36450 Msa1410470:intron 45.0%
TACCGGAATACATTGCGTGA+AGG - tig0023655:36510-36529 Msa1410470:intron 45.0%
GAGTCTTAATCCTCAGTTCC+AGG + tig0023655:36725-36744 None:intergenic 45.0%
! TTGGCAGACAGAGTATTTCG+GGG - tig0023655:37133-37152 Msa1410470:CDS 45.0%
ACAAGGCAGGTATATGAGGA+AGG - tig0023655:37166-37185 Msa1410470:CDS 45.0%
CGGGTCCTCTCTAACAAAAA+GGG + tig0023655:37750-37769 None:intergenic 45.0%
ACGGGTCCTCTCTAACAAAA+AGG + tig0023655:37751-37770 None:intergenic 45.0%
ACTTACAGAGGAGACTCTAC+AGG - tig0023655:37780-37799 Msa1410470:intron 45.0%
AGAGGAGACTCTACAGGATT+GGG - tig0023655:37786-37805 Msa1410470:intron 45.0%
! GAGCTCCTATCCTTTTGTGA+AGG - tig0023655:37820-37839 Msa1410470:CDS 45.0%
GTCTCTGAGCTGCAAGAATA+AGG + tig0023655:38096-38115 None:intergenic 45.0%
AGACCATTGAAAGTTCTGCC+AGG - tig0023655:38255-38274 Msa1410470:CDS 45.0%
GACCATTGAAAGTTCTGCCA+GGG - tig0023655:38256-38275 Msa1410470:CDS 45.0%
TTCCCTGGCAGAACTTTCAA+TGG + tig0023655:38261-38280 None:intergenic 45.0%
AAGTTCTGCCAGGGAATTTC+TGG - tig0023655:38265-38284 Msa1410470:CDS 45.0%
AGTTCTGCCAGGGAATTTCT+GGG - tig0023655:38266-38285 Msa1410470:CDS 45.0%
TACTACACTAGCTGATAGGG+TGG + tig0023655:38306-38325 None:intergenic 45.0%
CATCTCAGGTATCATCAGCT+GGG - tig0023655:38465-38484 Msa1410470:CDS 45.0%
ATCTCAGGTATCATCAGCTG+GGG - tig0023655:38466-38485 Msa1410470:CDS 45.0%
CAACCTCAGCTTACGAATGA+CGG + tig0023655:38543-38562 None:intergenic 45.0%
GAATGCAGTAAGGGAAGACA+TGG - tig0023655:38643-38662 Msa1410470:intron 45.0%
AGTGATGTCTGATAAGGCCT+TGG - tig0023655:38846-38865 Msa1410470:CDS 45.0%
!! TTTTAACTCGCCTTCCAACC+TGG + tig0023655:38896-38915 None:intergenic 45.0%
! TAATCAGTGTTGGAGGTAGC+AGG + tig0023655:38922-38941 None:intergenic 45.0%
TCAGAGTCCTCAAGCATTTG+TGG - tig0023655:39342-39361 Msa1410470:CDS 45.0%
AGAAGTTCGATGTGTCGAGT+TGG - tig0023655:39581-39600 Msa1410470:CDS 45.0%
GATCCGTCCTTAAGTGACAA+CGG - tig0023655:39636-39655 Msa1410470:CDS 45.0%
ATCCGTCCTTAAGTGACAAC+GGG - tig0023655:39637-39656 Msa1410470:CDS 45.0%
! CAAATCCCCGTTGTCACTTA+AGG + tig0023655:39646-39665 None:intergenic 45.0%
CTTAAGTGACAACGGGGATT+TGG - tig0023655:39644-39663 Msa1410470:CDS 45.0%
!! TTGGCTTTGACAGTATCTGG+AGG - tig0023655:39663-39682 Msa1410470:intron 45.0%
!! TGGCTTTGACAGTATCTGGA+GGG - tig0023655:39664-39683 Msa1410470:intron 45.0%
ACAGTATCTGGAGGGGAAAA+TGG - tig0023655:39672-39691 Msa1410470:intron 45.0%
CAATCTCTACATGCCATGTC+AGG - tig0023655:39744-39763 Msa1410470:intron 45.0%
AACTAGAAGCCGGAGTTGTT+CGG - tig0023655:39797-39816 Msa1410470:CDS 45.0%
TCTCCATTTCTCCTGTCTCA+GGG + tig0023655:39842-39861 None:intergenic 45.0%
GGGTTTGAAAAAGGATTCCC+TGG - tig0023655:39876-39895 Msa1410470:intron 45.0%
! CATAAACCATCTGGTCTTCC+AGG + tig0023655:39897-39916 None:intergenic 45.0%
CTGGAAGACCAGATGGTTTA+TGG - tig0023655:39895-39914 Msa1410470:intron 45.0%
TTCTATTGGAAGTCCGTCAG+TGG - tig0023655:39980-39999 Msa1410470:intron 45.0%
ATCTCAAGCTGTTGCCTCTA+AGG + tig0023655:40010-40029 None:intergenic 45.0%
! CTTGAGATCATCTGGTGATG+AGG - tig0023655:40022-40041 Msa1410470:intron 45.0%
!! AAAGCAGCTTGTTGATGGTC+AGG - tig0023655:40106-40125 Msa1410470:intron 45.0%
ATCGTATCTGTGTCCGTACT+AGG - tig0023655:40408-40427 Msa1410470:intron 45.0%
! CTTTTCTGAATTGCAGGGTC+AGG - tig0023655:40557-40576 Msa1410470:CDS 45.0%
!! TGTAGGTGTTGATCCAATGC+AGG - tig0023655:40611-40630 Msa1410470:CDS 45.0%
AACTGCAGAGACCAGTCTAA+AGG + tig0023655:40651-40670 None:intergenic 45.0%
GCTATGTACCATTAACCCAC+AGG - tig0023655:40712-40731 Msa1410470:intron 45.0%
! AAGTAGGTCCTGTGGGTTAA+TGG + tig0023655:40723-40742 None:intergenic 45.0%
! CTAGTGAGGTTTTCAGAGCA+GGG - tig0023655:41188-41207 Msa1410470:intron 45.0%
TAACACGGCGAAGCTATTCA+TGG - tig0023655:41255-41274 Msa1410470:intron 45.0%
! TCATTAGGAGTGTGTACAGC+AGG - tig0023655:41355-41374 Msa1410470:five_prime_UTR 45.0%
! CATTAGGAGTGTGTACAGCA+GGG - tig0023655:41356-41375 Msa1410470:five_prime_UTR 45.0%
TTACGTGTCAGTGTCCTGTC+TGG + tig0023655:35579-35598 None:intergenic 50.0%
CTTCTAAGTTCGGTCGGGTT+TGG + tig0023655:36685-36704 None:intergenic 50.0%
GTATCAAAACCCCTTCTCCC+TGG - tig0023655:36704-36723 Msa1410470:intron 50.0%
ATCCTCAGTTCCAGGGAGAA+GGG + tig0023655:36717-36736 None:intergenic 50.0%
AATCCTCAGTTCCAGGGAGA+AGG + tig0023655:36718-36737 None:intergenic 50.0%
TTCGGGGTGACTGTGAAACA+AGG - tig0023655:37149-37168 Msa1410470:CDS 50.0%
ATCGCTCTTTCAGTAGTCGG+TGG - tig0023655:37199-37218 Msa1410470:CDS 50.0%
GCATATGGGCAAACAAGCAG+TGG - tig0023655:37326-37345 Msa1410470:CDS 50.0%
! GCACTGACAACACTCCACTT+AGG - tig0023655:37618-37637 Msa1410470:CDS 50.0%
GGATCATCACGCAACCTAAG+TGG + tig0023655:37635-37654 None:intergenic 50.0%
TAGGTTGCGTGATGATCCTG+AGG - tig0023655:37637-37656 Msa1410470:CDS 50.0%
CAGAGGAGACTCTACAGGAT+TGG - tig0023655:37785-37804 Msa1410470:intron 50.0%
GAGGAGACTCTACAGGATTG+GGG - tig0023655:37787-37806 Msa1410470:intron 50.0%
AGGAGACTCTACAGGATTGG+GGG - tig0023655:37788-37807 Msa1410470:intron 50.0%
CTTGCAGCTCAGAGACAAGT+AGG - tig0023655:38100-38119 Msa1410470:CDS 50.0%
TCCTTTGCCCAGAAATTCCC+TGG + tig0023655:38276-38295 None:intergenic 50.0%
GCATCTCAGGTATCATCAGC+TGG - tig0023655:38464-38483 Msa1410470:CDS 50.0%
GCTGGGGTGAGATTGAAAGA+AGG - tig0023655:38482-38501 Msa1410470:CDS 50.0%
GAGGTTGTTCACTTCACCCT+CGG - tig0023655:38556-38575 Msa1410470:intron 50.0%
ATACTGCAGCCTTGCTTAGG+TGG - tig0023655:38700-38719 Msa1410470:CDS 50.0%
CTAGCATTGCCACCTAAGCA+AGG + tig0023655:38712-38731 None:intergenic 50.0%
TTTGCACTTTGAGCCCTGCA+CGG - tig0023655:38743-38762 Msa1410470:intron 50.0%
GTTCAACATGACTCCGTGCA+GGG + tig0023655:38759-38778 None:intergenic 50.0%
TGTTCAACATGACTCCGTGC+AGG + tig0023655:38760-38779 None:intergenic 50.0%
GCAAAAAGAGTTGGCCAGGT+TGG - tig0023655:38879-38898 Msa1410470:intron 50.0%
! AAAGAGTTGGCCAGGTTGGA+AGG - tig0023655:38883-38902 Msa1410470:intron 50.0%
!! GATTGAGGATTTGCTGCGCA+TGG - tig0023655:39138-39157 Msa1410470:intron 50.0%
GTTGGGACCACAAATGCTTG+AGG + tig0023655:39352-39371 None:intergenic 50.0%
TCCGTCCTTAAGTGACAACG+GGG - tig0023655:39638-39657 Msa1410470:CDS 50.0%
! TCCCCGTTGTCACTTAAGGA+CGG + tig0023655:39642-39661 None:intergenic 50.0%
! GGCTTTGACAGTATCTGGAG+GGG - tig0023655:39665-39684 Msa1410470:intron 50.0%
AGGGGAAAATGGAACAAGCC+AGG - tig0023655:39683-39702 Msa1410470:intron 50.0%
TGTGATGCTCCGAACAACTC+CGG + tig0023655:39809-39828 None:intergenic 50.0%
TTCCCCTGAGACAGGAGAAA+TGG - tig0023655:39836-39855 Msa1410470:intron 50.0%
CTCCATTTCTCCTGTCTCAG+GGG + tig0023655:39841-39860 None:intergenic 50.0%
CTCTCCATTTCTCCTGTCTC+AGG + tig0023655:39843-39862 None:intergenic 50.0%
CTGAGACAGGAGAAATGGAG+AGG - tig0023655:39841-39860 Msa1410470:intron 50.0%
ATGGAGAGGACGCCATTCAA+TGG - tig0023655:39855-39874 Msa1410470:intron 50.0%
TGGAGAGGACGCCATTCAAT+GGG - tig0023655:39856-39875 Msa1410470:intron 50.0%
!! CCTCTAAGGTCATCCACTGA+CGG + tig0023655:39996-40015 None:intergenic 50.0%
GGCAACAGCTTGAGATCATC+TGG - tig0023655:40014-40033 Msa1410470:intron 50.0%
! GAAACCCAGGGTACCTAGTA+CGG + tig0023655:40424-40443 None:intergenic 50.0%
!! AGGTGTTGATCCAATGCAGG+AGG - tig0023655:40614-40633 Msa1410470:CDS 50.0%
CACCAGGAACTCCTTTAGAC+TGG - tig0023655:40637-40656 Msa1410470:exon 50.0%
GACCAGTCTAAAGGAGTTCC+TGG + tig0023655:40642-40661 None:intergenic 50.0%
! ACTGGTCTCTGCAGTTCAAG+AGG - tig0023655:40655-40674 Msa1410470:five_prime_UTR 50.0%
TCTGGCTGTCTTTCTCAGAC+TGG + tig0023655:40842-40861 None:intergenic 50.0%
GACACAGTGTGAGAGCTCTT+CGG - tig0023655:40982-41001 Msa1410470:intron 50.0%
TATGCGGAAGAGGCTTTCTG+AGG - tig0023655:41031-41050 Msa1410470:intron 50.0%
! AGAGGCTTTCTGAGGAAGAG+AGG - tig0023655:41039-41058 Msa1410470:intron 50.0%
TGCAGCTAGCAGACCGTTTA+TGG - tig0023655:41114-41133 Msa1410470:intron 50.0%
TTGCAGCACTCTGCATTACG+TGG + tig0023655:41157-41176 None:intergenic 50.0%
!! AGAGTGCTGCAATAGTTGCG+AGG - tig0023655:41165-41184 Msa1410470:intron 50.0%
CAATAGTTGCGAGGCTAGTG+AGG - tig0023655:41174-41193 Msa1410470:intron 50.0%
! GCTAGTGAGGTTTTCAGAGC+AGG - tig0023655:41187-41206 Msa1410470:intron 50.0%
GCTTCACACCTCAGCTAACA+CGG - tig0023655:41240-41259 Msa1410470:intron 50.0%
CTGTCTGGTGTCTGGTGTCT+GGG + tig0023655:35564-35583 None:intergenic 55.0%
TCAGTGTCCTGTCTGGTGTC+TGG + tig0023655:35572-35591 None:intergenic 55.0%
TCCTCAGTTCCAGGGAGAAG+GGG + tig0023655:36716-36735 None:intergenic 55.0%
GGGTGACTGTGAAACAAGGC+AGG - tig0023655:37153-37172 Msa1410470:CDS 55.0%
GCGCTATAGCGCTGCAGAAT+TGG - tig0023655:37923-37942 Msa1410470:intron 55.0%
! GCCAGGGAATTTCTGGGCAA+AGG - tig0023655:38272-38291 Msa1410470:CDS 55.0%
CGACCGTCATTCGTAAGCTG+AGG - tig0023655:38537-38556 Msa1410470:intron 55.0%
CGCATACTGCAGCCTTGCTT+AGG - tig0023655:38697-38716 Msa1410470:CDS 55.0%
!! TGAGGATTTGCTGCGCATGG+TGG - tig0023655:39141-39160 Msa1410470:intron 55.0%
!! GAGGATTTGCTGCGCATGGT+GGG - tig0023655:39142-39161 Msa1410470:intron 55.0%
!! AGGATTTGCTGCGCATGGTG+GGG - tig0023655:39143-39162 Msa1410470:intron 55.0%
ATGACTGCTTCCCCTGAGAC+AGG - tig0023655:39828-39847 Msa1410470:intron 55.0%
GGATTCCCTGGAAGACCAGA+TGG - tig0023655:39888-39907 Msa1410470:intron 55.0%
CCGTCAGTGGATGACCTTAG+AGG - tig0023655:39993-40012 Msa1410470:intron 55.0%
TGTGTCCGTACTAGGTACCC+TGG - tig0023655:40416-40435 Msa1410470:intron 55.0%
GTGTCCGTACTAGGTACCCT+GGG - tig0023655:40417-40436 Msa1410470:intron 55.0%
ACAGTGTGAGAGCTCTTCGG+CGG - tig0023655:40985-41004 Msa1410470:intron 55.0%
CGAGCCCTCAAGGAGATGTT+TGG - tig0023655:41212-41231 Msa1410470:intron 55.0%
TAGCTTCGCCGTGTTAGCTG+AGG + tig0023655:41251-41270 None:intergenic 55.0%
CCTGTCTGGTGTCTGGTGTC+TGG + tig0023655:35565-35584 None:intergenic 60.0%
CCAGACACCAGACACCAGAC+AGG - tig0023655:35562-35581 Msa1410470:three_prime_UTR 60.0%
ACCCCTTCTCCCTGGAACTG+AGG - tig0023655:36712-36731 Msa1410470:intron 60.0%
!! GATCCAATGCAGGAGGCACC+AGG - tig0023655:40621-40640 Msa1410470:CDS 60.0%
GTTCCTGGTGCCTCCTGCAT+TGG + tig0023655:40627-40646 None:intergenic 60.0%
CAGTGTGAGAGCTCTTCGGC+GGG - tig0023655:40986-41005 Msa1410470:intron 60.0%
AGGGAGCGAGCGTGCATCTC+AGG - tig0023655:38451-38470 Msa1410470:CDS 65.0%
AGAGCAGGGACGAGCCCTCA+AGG - tig0023655:41202-41221 Msa1410470:intron 65.0%
Chromosome Type Strat End Strand Name
tig0023655 gene 35253 41733 35253 ID=Msa1410470;Name=Msa1410470
tig0023655 mRNA 35253 41733 35253 ID=Msa1410470-mRNA-1;Parent=Msa1410470;Name=Msa1410470-mRNA-1;_AED=0.10;_eAED=0.10;_QI=479|1|1|1|0.92|0.86|15|429|873
tig0023655 exon 35253 35997 35253 ID=Msa1410470-mRNA-1:exon:26595;Parent=Msa1410470-mRNA-1
tig0023655 exon 36106 36413 36106 ID=Msa1410470-mRNA-1:exon:26594;Parent=Msa1410470-mRNA-1
tig0023655 exon 36859 37430 36859 ID=Msa1410470-mRNA-1:exon:26593;Parent=Msa1410470-mRNA-1
tig0023655 exon 37551 37677 37551 ID=Msa1410470-mRNA-1:exon:26592;Parent=Msa1410470-mRNA-1
tig0023655 exon 37800 37901 37800 ID=Msa1410470-mRNA-1:exon:26591;Parent=Msa1410470-mRNA-1
tig0023655 exon 38005 38335 38005 ID=Msa1410470-mRNA-1:exon:26590;Parent=Msa1410470-mRNA-1
tig0023655 exon 38428 38552 38428 ID=Msa1410470-mRNA-1:exon:26589;Parent=Msa1410470-mRNA-1
tig0023655 exon 38664 38729 38664 ID=Msa1410470-mRNA-1:exon:26588;Parent=Msa1410470-mRNA-1
tig0023655 exon 38812 38879 38812 ID=Msa1410470-mRNA-1:exon:26587;Parent=Msa1410470-mRNA-1
tig0023655 exon 39145 39226 39145 ID=Msa1410470-mRNA-1:exon:26586;Parent=Msa1410470-mRNA-1
tig0023655 exon 39328 39441 39328 ID=Msa1410470-mRNA-1:exon:26585;Parent=Msa1410470-mRNA-1
tig0023655 exon 39571 39671 39571 ID=Msa1410470-mRNA-1:exon:26584;Parent=Msa1410470-mRNA-1
tig0023655 exon 39757 39846 39757 ID=Msa1410470-mRNA-1:exon:26583;Parent=Msa1410470-mRNA-1
tig0023655 exon 40425 40719 40425 ID=Msa1410470-mRNA-1:exon:26582;Parent=Msa1410470-mRNA-1
tig0023655 exon 41330 41733 41330 ID=Msa1410470-mRNA-1:exon:26581;Parent=Msa1410470-mRNA-1
tig0023655 five_prime_UTR 41330 41733 41330 ID=Msa1410470-mRNA-1:five_prime_utr;Parent=Msa1410470-mRNA-1
tig0023655 five_prime_UTR 40645 40719 40645 ID=Msa1410470-mRNA-1:five_prime_utr;Parent=Msa1410470-mRNA-1
tig0023655 CDS 40425 40644 40425 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 39757 39846 39757 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 39571 39671 39571 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 39328 39441 39328 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 39145 39226 39145 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 38812 38879 38812 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 38664 38729 38664 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 38428 38552 38428 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 38005 38335 38005 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 37800 37901 37800 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 37551 37677 37551 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 36859 37430 36859 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 36106 36413 36106 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 CDS 35682 35997 35682 ID=Msa1410470-mRNA-1:cds;Parent=Msa1410470-mRNA-1
tig0023655 three_prime_UTR 35253 35681 35253 ID=Msa1410470-mRNA-1:three_prime_utr;Parent=Msa1410470-mRNA-1
Gene Sequence

>Msa1410470

ATGGGAGCTATTGCTGGAGAAGAGTTGTCGAAATGGGAGAAGATGAATGGAGTTAGTGGTTGTGAAGAGAAGATTCTTGTGTTACTTAGGCTTAGGCCTTTGAATGAGAAGGAAATTTCTGCTAATGAATCTGCAGATTGGGAATGTATTAATGATACTACAATTTTGTACCGGAATACATTGCGTGAAGGTTCTACGTTTCCAAGTGCCTACACATTTGACAGAGTATTTCGGGGTGACTGTGAAACAAGGCAGGTATATGAGGAAGGAGCTAGAGAAATCGCTCTTTCAGTAGTCGGTGGAATTAACTCAAGTATTTTTGCATATGGGCAAACAAGCAGTGGAAAGACATATACTATGGTTGGAATAACTGAATTTGCTGTAGCAGATATTTTTGACTATGCAAAAAGGCATGAAGAAAGAGCATTTGCATTGAAGTTCTCAGCAATTGAGATTTACAATGAAATTGTTAGAGATCTTCTCAGCACTGACAACACTCCACTTAGGTTGCGTGATGATCCTGAGAGAGGACCCGTTCTAGAGAAACTTACAGAGGAGACTCTACAGGATTGGGGGCATTTTCAAGAGCTCCTATCCTTTTGTGAAGCTCAGAGACAAGTAGGAGAGACATACCTGAATGAAAAGAGTTCAAGATCTCACCAAATTATCAGATTGACCATTGAAAGTTCTGCCAGGGAATTTCTGGGCAAAGGAAACTCAACCACCCTATCAGCTAGTGTAAATTTTGTTGATTTGGCAGGGAGCGAGCGTGCATCTCAGGTATCATCAGCTGGGGTGAGATTGAAAGAAGGTTGCCATATAAACCGGAGTTTACTTACTCTTTCGACCGTCATTCGTAAGCTGAGTAAGGGAAGACATGGACACATCAATTACAGAGATTCTAAGTTGACACGCATACTGCAGCCTTGCTTAGGTGGCAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCTGCACGGAGTCATGTTGAACAAACTAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTTACCACTAAAGCACAGGTTAATGTAGTGATGTCTGATAAGGCCTTGGTCAAGCAATTGCAAAAAGAGTTGGCCAGGTTGGAAGGCGAGTTAAAAACTCCTGCTACCTCCAACACTGATTATGTAGCTTTGTTGAGAAAGAAAGATCAACAGATAGAAAAGATGGATAAGGAAATTAAGGAGCTAACTAAGCAACGTGATCTTGCTGAATCAAGGATTGAGGATTTGCTGCGCATGGTGGGGAAAGATCAGATATCTAAAAAGGAAGAAGATTTATGGGAAGATGACTGTTCAGTATCAGAGTCCTCAAGCATTTGTGGTCCCAACATACGCATTAGAGAGTTCAACAATCCTCAATATAATAGTGGAGACAGTGGAAGTATTCAAGATGAAGAAGACCTTGATGAATACTGCAAAGAAGTTCGATGTGTCGAGTTGGAAGAGTCAAGTAGAGACAACTCAGAATTACTTGATCCGTCCTTAAGTGACAACGGGGATTTGGCTTTGACAGTATCTGGAGGGGAAAATGGAACAAGCCAGGAAATGTCTACACATTTGAATGAAGACAGCCATGATGAACAATCTCTACATGCCATGTCAGGAAACATGTCAAATTATAGAAATCACAAATTAACTAGAAGCCGGAGTTGTTCGGAGCATCACATGACTGCTTCCCCTGAGACAGGAGAAATGGAGAGGACGCCATTCAATGGGTTTGAAAAAGGATTCCCTGGAAGACCAGATGGTTTATGGAGAAAGTTCAATCCATTAAATTTAGATGGTTCAACAAGATTTTCAAGGAACGATTCTCAGTCTTCTATTGGAAGTCCGTCAGTGGATGACCTTAGAGGCAACAGCTTGAGATCATCTGGTGATGAGGACATTACTAGCATCCATACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACTTGAATATGAAAAGCAGCTTGTTGATGGTCAGGGTCAGGAGACAGATAGAAAACTGAGGAATGTGAAAGATGTAGGTGTTGATCCAATGCAGGAGGCACCAGGAACTCCTTTAGACTGGTCTCTGCAGTTCAAGAGGCAGCAAAAAGAGATAATTGAACTGTGGCAATCTTGCTATGTACCATTAACCCACAGGACCTACTTCTTTCTTTTGTTTAGGGGTGAACAAACAGATTCCATTTACATGGAGGTAGAGCTTAGAAGACTATGCTTCCTGAAAGAAACATTTTTTGATGAAAACCAGTCTGAGAAAGACAGCCAGACAATCACGTTAACTTCAAGTGTGAGAGCTCTTCGGCGGGAGAAAGAAATGCTTATGAAGCTTATGCGGAAGAGGCTTTCTGAGGAAGAGAGGAAAAGGCTATTTAACGAATGGGGCATTGGATTGAATTCAAAGCGCAGGAGAATGCAGCTAGCAGACCGTTTATGGTGCAACACTGATATGAACCACGTAATGCAGAGTGCTGCAATAGTTGCGAGGCTAGTGAGGTTTTCAGAGCAGGGACGAGCCCTCAAGGAGATGTTTGGACTTAGCTTCACACCTCAGCTAACACGGCGAAGCTATTCATGGAAAAGTTCAAGAGCATCTCTTCCTTAG
Protein sequence

>Msa1410470

MGAIAGEELSKWEKMNGVSGCEEKILVLLRLRPLNEKEISANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCETRQVYEEGAREIALSVVGGINSSIFAYGQTSSGKTYTMVGITEFAVADIFDYAKRHEERAFALKFSAIEIYNEIVRDLLSTDNTPLRLRDDPERGPVLEKLTEETLQDWGHFQELLSFCEAQRQVGETYLNEKSSRSHQIIRLTIESSAREFLGKGNSTTLSASVNFVDLAGSERASQVSSAGVRLKEGCHINRSLLTLSTVIRKLSKGRHGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKELARLEGELKTPATSNTDYVALLRKKDQQIEKMDKEIKELTKQRDLAESRIEDLLRMVGKDQISKKEEDLWEDDCSVSESSSICGPNIRIREFNNPQYNSGDSGSIQDEEDLDEYCKEVRCVELEESSRDNSELLDPSLSDNGDLALTVSGGENGTSQEMSTHLNEDSHDEQSLHAMSGNMSNYRNHKLTRSRSCSEHHMTASPETGEMERTPFNGFEKGFPGRPDGLWRKFNPLNLDGSTRFSRNDSQSSIGSPSVDDLRGNSLRSSGDEDITSIHTFVAGMKEMVKLEYEKQLVDGQGQETDRKLRNVKDVGVDPMQEAPGTPLDWSLQFKRQQKEIIELWQSCYVPLTHRTYFFLLFRGEQTDSIYMEVELRRLCFLKETFFDENQSEKDSQTITLTSSVRALRREKEMLMKLMRKRLSEEERKRLFNEWGIGLNSKRRRMQLADRLWCNTDMNHVMQSAAIVARLVRFSEQGRALKEMFGLSFTPQLTRRSYSWKSSRASLP*