AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0647980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0647980 MtrunA17_Chr4g0036001 90.868 876 24 4 1 822 1 874 0.0 1601
Msa0647980 MtrunA17_Chr5g0405181 56.373 557 139 11 1 463 1 547 0.0 566
Msa0647980 MtrunA17_Chr5g0405181 44.964 278 143 6 547 814 669 946 8.16e-60 219
Msa0647980 MtrunA17_Chr8g0372171 65.747 435 110 4 1 401 1 430 0.0 560
Msa0647980 MtrunA17_Chr8g0372171 37.946 224 106 10 518 714 813 1030 8.51e-26 114
Msa0647980 MtrunA17_Chr3g0142261 57.720 421 136 5 19 408 14 423 3.05e-145 465
Msa0647980 MtrunA17_Chr3g0142261 38.113 265 135 9 572 821 1270 1520 2.36e-43 170
Msa0647980 MtrunA17_Chr6g0483701 54.502 422 149 6 17 405 23 434 1.53e-132 419
Msa0647980 MtrunA17_Chr6g0483701 39.834 241 136 4 581 812 711 951 2.10e-45 176
Msa0647980 MtrunA17_Chr4g0070001 50.000 408 152 5 22 399 141 526 4.68e-111 363
Msa0647980 MtrunA17_Chr4g0070001 36.100 241 142 6 581 814 793 1028 1.27e-40 161
Msa0647980 MtrunA17_Chr1g0152231 36.425 442 228 10 23 424 2 430 8.14e-68 240
Msa0647980 MtrunA17_Chr1g0193221 46.667 285 140 3 74 346 72 356 2.45e-67 243
Msa0647980 MtrunA17_Chr7g0258991 37.019 416 217 9 21 395 70 481 3.59e-64 233
Msa0647980 MtrunA17_Chr3g0145071 35.499 431 231 8 3 395 80 501 1.02e-63 232
Msa0647980 MtrunA17_Chr4g0035661 35.280 411 221 7 23 395 88 491 4.94e-62 227
Msa0647980 MtrunA17_Chr2g0327581 33.333 414 213 11 10 369 40 444 2.87e-47 182
Msa0647980 MtrunA17_Chr3g0132921 32.243 428 218 10 74 462 82 476 7.15e-47 175
Msa0647980 MtrunA17_Chr3g0122121 39.203 301 151 7 74 343 169 468 1.71e-46 180
Msa0647980 MtrunA17_Chr1g0178411 31.858 452 237 9 11 401 5 446 4.04e-46 178
Msa0647980 MtrunA17_Chr2g0322291 33.094 417 207 12 3 352 60 471 1.28e-44 174
Msa0647980 MtrunA17_Chr5g0427481 37.785 307 147 7 74 346 90 386 4.00e-44 172
Msa0647980 MtrunA17_Chr8g0377731 37.383 321 164 8 74 362 124 439 7.18e-44 172
Msa0647980 MtrunA17_Chr4g0053211 32.947 431 208 17 25 381 13 436 2.24e-43 170
Msa0647980 MtrunA17_Chr4g0045381 36.096 374 177 9 25 342 194 561 3.39e-43 170
Msa0647980 MtrunA17_Chr7g0266631 30.841 428 231 7 25 391 10 433 7.85e-43 168
Msa0647980 MtrunA17_Chr1g0195111 35.758 330 181 9 32 346 438 751 8.30e-42 165
Msa0647980 MtrunA17_Chr1g0182151 32.065 368 219 7 75 415 135 498 9.24e-42 165
Msa0647980 MtrunA17_Chr4g0069141 39.865 296 146 8 76 346 230 518 1.95e-41 164
Msa0647980 MtrunA17_Chr1g0153061 35.088 342 179 9 74 374 81 420 2.88e-40 160
Msa0647980 MtrunA17_Chr3g0134191 34.571 350 185 9 74 381 81 428 2.24e-39 157
Msa0647980 MtrunA17_Chr8g0369881 30.894 369 214 9 2 335 853 1215 1.99e-38 155
Msa0647980 MtrunA17_Chr4g0062291 32.764 351 179 10 18 320 117 458 5.81e-38 151
Msa0647980 MtrunA17_Chr1g0192481 37.217 309 163 12 76 359 136 438 6.01e-38 150
Msa0647980 MtrunA17_Chr5g0407791 31.034 377 216 9 7 345 872 1242 7.27e-38 153
Msa0647980 MtrunA17_Chr7g0271961 33.742 326 181 11 34 346 448 751 1.74e-37 151
Msa0647980 MtrunA17_Chr2g0307481 38.189 254 145 6 74 320 152 400 1.96e-36 146
Msa0647980 MtrunA17_Chr4g0042061 37.023 262 130 7 76 310 513 766 4.23e-35 143
Msa0647980 MtrunA17_Chr2g0280421 36.255 251 139 5 76 311 517 761 5.84e-35 142
Msa0647980 MtrunA17_Chr2g0319271 36.502 263 131 7 76 310 480 734 6.48e-35 142
Msa0647980 MtrunA17_Chr2g0312631 28.758 459 264 16 25 433 385 830 1.52e-34 142
Msa0647980 MtrunA17_Chr2g0331761 33.234 334 174 8 24 317 185 509 2.10e-34 140
Msa0647980 MtrunA17_Chr5g0411971 30.806 422 244 13 7 386 381 796 2.38e-34 141
Msa0647980 MtrunA17_Chr3g0102921 34.853 307 148 11 76 347 518 807 1.10e-33 139
Msa0647980 MtrunA17_Chr5g0421521 29.571 443 256 15 7 399 356 792 3.28e-33 138
Msa0647980 MtrunA17_Chr4g0049011 34.100 261 140 5 76 310 358 612 6.31e-33 135
Msa0647980 MtrunA17_Chr6g0485471 32.647 340 186 9 13 317 108 439 1.06e-32 135
Msa0647980 MtrunA17_Chr2g0295881 32.362 343 178 9 24 317 197 534 1.07e-32 136
Msa0647980 MtrunA17_Chr5g0421591 29.797 443 255 15 7 399 356 792 1.17e-32 136
Msa0647980 MtrunA17_Chr5g0398521 30.851 376 197 9 24 342 57 426 1.40e-32 135
Msa0647980 MtrunA17_Chr5g0447041 29.078 423 191 13 16 346 426 831 2.70e-31 132
Msa0647980 MtrunA17_Chr7g0257301 33.544 316 152 9 76 343 470 775 1.03e-30 130
Msa0647980 MtrunA17_Chr1g0191851 35.354 297 157 10 76 348 226 511 1.13e-30 129
Msa0647980 MtrunA17_Chr7g0245931 29.091 385 214 8 14 345 45 423 1.49e-30 129
Msa0647980 MtrunA17_Chr7g0272871 30.288 416 224 15 25 387 128 530 6.30e-30 127
Msa0647980 MtrunA17_Chr7g0238581 32.131 305 174 8 74 354 113 408 8.23e-30 125
Msa0647980 MtrunA17_Chr4g0067421 32.036 334 175 9 24 310 205 533 1.13e-29 126
Msa0647980 MtrunA17_Chr3g0101021 29.235 366 211 10 25 344 76 439 5.90e-28 121
Msa0647980 MtrunA17_Chr5g0445211 30.351 313 186 8 75 356 143 454 1.66e-25 113
Msa0647980 MtrunA17_Chr7g0269681 38.122 181 104 4 166 346 49 221 7.56e-25 108
Msa0647980 MtrunA17_Chr1g0191181 28.099 363 200 8 76 418 162 483 7.59e-24 107
Msa0647980 MtrunA17_Chr8g0372181 51.648 91 43 1 728 817 1 91 2.14e-23 95.1
Msa0647980 MtrunA17_Chr8g0386891 40.690 145 80 3 166 310 12 150 5.88e-21 96.3
Msa0647980 MtrunA17_Chr6g0484501 33.333 207 112 5 166 370 42 224 2.74e-17 82.4
Msa0647980 MtrunA17_Chr8g0390991 38.621 145 83 3 166 310 12 150 2.57e-16 83.2
Msa0647980 MtrunA17_Chr8g0367581 32.143 252 146 10 74 314 221 458 1.22e-15 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0647980 AT2G21300.2 55.691 905 273 18 1 821 1 861 0.0 905
Msa0647980 AT2G21300.4 55.691 905 273 18 1 821 1 861 0.0 905
Msa0647980 AT2G21300.3 55.691 905 273 18 1 821 1 861 0.0 905
Msa0647980 AT2G21300.1 55.691 905 273 18 1 821 1 861 0.0 905
Msa0647980 AT2G21300.5 55.691 905 273 18 1 821 1 861 0.0 905
Msa0647980 AT4G38950.3 55.390 872 270 19 22 821 11 835 0.0 855
Msa0647980 AT4G38950.5 55.390 872 270 19 22 821 11 835 0.0 855
Msa0647980 AT4G38950.4 55.390 872 270 19 22 821 11 835 0.0 855
Msa0647980 AT4G38950.1 55.390 872 270 19 22 821 11 835 0.0 855
Msa0647980 AT4G38950.2 55.390 872 270 19 22 821 11 835 0.0 855
Msa0647980 AT3G51150.1 60.486 453 138 5 13 428 6 454 7.95e-177 537
Msa0647980 AT3G51150.1 51.471 204 95 3 621 821 847 1049 8.05e-58 214
Msa0647980 AT3G51150.2 60.486 453 138 5 13 428 6 454 8.65e-177 537
Msa0647980 AT3G51150.2 51.471 204 95 3 621 821 849 1051 8.42e-58 214
Msa0647980 AT3G51150.4 60.486 453 138 5 13 428 6 454 8.65e-177 537
Msa0647980 AT3G51150.4 51.471 204 95 3 621 821 849 1051 8.42e-58 214
Msa0647980 AT3G51150.3 60.486 453 138 5 13 428 6 454 8.65e-177 537
Msa0647980 AT3G51150.3 51.471 204 95 3 621 821 849 1051 8.42e-58 214
Msa0647980 AT5G66310.2 62.911 426 124 3 13 404 7 432 1.37e-171 524
Msa0647980 AT5G66310.2 43.200 250 124 5 581 821 820 1060 3.12e-52 197
Msa0647980 AT5G66310.3 62.911 426 124 3 13 404 7 432 1.37e-171 524
Msa0647980 AT5G66310.3 43.200 250 124 5 581 821 820 1060 3.12e-52 197
Msa0647980 AT5G66310.1 62.911 426 124 3 13 404 7 432 1.37e-171 524
Msa0647980 AT5G66310.1 43.200 250 124 5 581 821 820 1060 3.12e-52 197
Msa0647980 AT4G24170.1 63.923 413 114 8 20 398 2 413 3.81e-160 492
Msa0647980 AT4G24170.1 38.362 232 113 6 592 819 791 996 2.05e-36 148
Msa0647980 AT4G24170.2 63.923 413 114 8 20 398 2 413 3.81e-160 492
Msa0647980 AT4G24170.2 38.362 232 113 6 592 819 791 996 2.05e-36 148
Msa0647980 AT1G18370.1 54.916 417 140 6 22 403 29 432 2.13e-130 414
Msa0647980 AT1G18370.1 35.069 288 160 7 546 813 682 962 2.02e-44 173
Msa0647980 AT3G43210.3 53.349 418 154 6 9 389 9 422 4.73e-125 399
Msa0647980 AT3G43210.3 37.200 250 143 7 572 812 681 925 3.36e-40 160
Msa0647980 AT3G43210.5 53.349 418 154 6 9 389 9 422 4.73e-125 399
Msa0647980 AT3G43210.5 37.200 250 143 7 572 812 681 925 3.36e-40 160
Msa0647980 AT3G43210.2 53.349 418 154 6 9 389 9 422 4.73e-125 399
Msa0647980 AT3G43210.2 37.200 250 143 7 572 812 681 925 3.36e-40 160
Msa0647980 AT3G43210.4 53.349 418 154 6 9 389 9 422 4.73e-125 399
Msa0647980 AT3G43210.4 37.200 250 143 7 572 812 681 925 3.36e-40 160
Msa0647980 AT3G43210.1 53.349 418 154 6 9 389 9 422 4.73e-125 399
Msa0647980 AT3G43210.1 37.200 250 143 7 572 812 681 925 3.36e-40 160
Msa0647980 AT3G51150.5 64.014 289 95 3 145 428 17 301 1.07e-111 362
Msa0647980 AT3G51150.5 51.471 204 95 3 621 821 696 898 5.32e-58 214
Msa0647980 AT5G42490.1 61.710 269 72 2 20 258 5 272 3.54e-94 319
Msa0647980 AT5G42490.1 46.328 177 86 3 645 819 910 1079 8.38e-44 172
Msa0647980 AT5G42490.2 61.710 269 72 2 20 258 5 272 3.59e-94 318
Msa0647980 AT5G42490.2 46.328 177 86 3 645 819 906 1075 8.94e-44 172
Msa0647980 AT3G10180.2 39.402 368 185 6 23 355 2 366 8.83e-70 251
Msa0647980 AT3G10180.1 39.402 368 185 6 23 355 2 366 9.44e-70 251
Msa0647980 AT3G12020.4 38.849 417 209 10 21 395 66 478 2.99e-68 244
Msa0647980 AT3G12020.1 38.849 417 209 10 21 395 66 478 2.99e-68 244
Msa0647980 AT3G12020.3 38.849 417 209 10 21 395 66 478 8.97e-68 244
Msa0647980 AT3G12020.2 38.849 417 209 10 21 395 66 478 8.97e-68 244
Msa0647980 AT1G59540.1 40.720 361 172 7 23 347 2 356 4.67e-67 239
Msa0647980 AT5G06670.8 39.496 357 183 6 21 347 63 416 3.32e-65 232
Msa0647980 AT5G06670.4 39.496 357 183 6 21 347 63 416 3.32e-65 232
Msa0647980 AT5G06670.7 39.496 357 183 6 21 347 63 416 3.32e-65 232
Msa0647980 AT5G06670.5 39.607 356 182 6 21 346 63 415 5.12e-65 231
Msa0647980 AT5G06670.2 39.496 357 183 6 21 347 63 416 6.80e-64 232
Msa0647980 AT5G06670.3 39.496 357 183 6 21 347 63 416 6.80e-64 232
Msa0647980 AT1G21730.1 39.946 368 188 7 21 358 72 436 4.98e-63 228
Msa0647980 AT5G06670.6 39.891 366 178 8 21 347 63 425 5.13e-63 229
Msa0647980 AT5G06670.1 39.891 366 178 8 21 347 63 425 5.13e-63 229
Msa0647980 AT2G21380.2 35.627 407 221 7 25 395 105 506 9.07e-62 226
Msa0647980 AT2G21380.1 35.627 407 221 7 25 395 105 506 9.07e-62 226
Msa0647980 AT4G39050.1 35.266 414 227 7 18 395 92 500 1.72e-61 225
Msa0647980 AT1G59540.2 44.828 261 134 3 92 347 9 264 5.37e-58 211
Msa0647980 AT2G28620.3 32.662 447 238 8 9 400 40 478 5.72e-50 191
Msa0647980 AT2G28620.2 32.662 447 238 8 9 400 40 478 5.72e-50 191
Msa0647980 AT2G28620.1 32.662 447 238 8 9 400 40 478 6.32e-50 191
Msa0647980 AT4G14150.1 34.646 381 199 7 25 356 92 471 8.26e-50 191
Msa0647980 AT3G23670.2 34.527 391 203 9 17 357 91 478 1.97e-48 186
Msa0647980 AT3G23670.1 34.527 391 203 9 17 357 91 478 4.31e-48 185
Msa0647980 AT3G49650.1 37.370 289 160 6 74 346 98 381 2.07e-46 179
Msa0647980 AT3G17360.1 40.878 296 143 7 76 346 245 533 1.98e-45 177
Msa0647980 AT3G17360.3 40.878 296 143 7 76 346 245 533 2.13e-45 177
Msa0647980 AT3G17360.2 40.878 296 143 7 76 346 245 533 2.26e-45 177
Msa0647980 AT3G45850.2 34.659 352 200 6 75 400 136 483 7.60e-45 175
Msa0647980 AT3G45850.1 34.659 352 200 6 75 400 136 483 7.60e-45 175
Msa0647980 AT2G36200.1 31.166 446 231 11 10 391 3 436 1.09e-44 174
Msa0647980 AT2G37420.1 34.593 344 187 7 75 388 129 464 4.89e-44 172
Msa0647980 AT2G37420.2 34.593 344 187 7 75 388 129 464 4.89e-44 172
Msa0647980 AT2G36200.2 31.494 435 222 11 10 380 3 425 5.60e-44 172
Msa0647980 AT3G19050.1 37.069 348 166 7 25 323 194 537 2.98e-43 171
Msa0647980 AT5G60930.3 32.961 358 186 8 74 384 79 429 1.18e-42 168
Msa0647980 AT5G60930.1 32.961 358 186 8 74 384 79 429 1.36e-42 168
Msa0647980 AT5G60930.2 32.961 358 186 8 74 384 79 429 1.36e-42 168
Msa0647980 AT3G44050.1 38.487 304 142 6 76 344 170 463 5.32e-41 163
Msa0647980 AT1G18550.1 34.181 354 179 10 9 316 136 481 4.15e-40 159
Msa0647980 AT3G50240.2 33.141 347 179 9 74 374 98 437 9.04e-40 159
Msa0647980 AT3G50240.1 33.621 348 176 9 74 374 98 437 1.11e-39 159
Msa0647980 AT3G50240.4 33.621 348 176 9 74 374 98 437 1.17e-39 159
Msa0647980 AT5G65930.1 31.300 377 215 8 7 345 870 1240 2.44e-39 158
Msa0647980 AT5G65930.2 31.300 377 215 8 7 345 871 1241 2.67e-39 158
Msa0647980 AT5G65930.3 31.300 377 215 8 7 345 877 1247 2.90e-39 158
Msa0647980 AT5G47820.2 35.347 331 169 8 74 359 84 414 2.19e-38 155
Msa0647980 AT5G47820.1 35.347 331 169 8 74 359 84 414 2.19e-38 155
Msa0647980 AT1G09170.4 36.306 314 161 10 76 363 513 813 5.34e-38 153
Msa0647980 AT2G47500.1 38.206 301 156 9 76 352 477 771 6.36e-38 153
Msa0647980 AT3G63480.2 32.194 351 187 8 25 330 4 348 7.74e-38 148
Msa0647980 AT2G47500.2 38.206 301 156 9 76 352 477 771 7.97e-38 152
Msa0647980 AT1G09170.5 35.783 313 164 9 76 363 513 813 8.03e-38 153
Msa0647980 AT1G09170.2 35.783 313 164 9 76 363 513 813 1.00e-37 152
Msa0647980 AT5G27000.1 33.728 338 185 10 76 396 474 789 4.75e-37 150
Msa0647980 AT1G09170.3 36.429 280 157 7 76 342 513 784 1.51e-36 148
Msa0647980 AT1G09170.7 36.429 280 157 7 76 342 513 784 1.51e-36 148
Msa0647980 AT3G63480.1 31.831 355 187 10 25 330 4 352 2.46e-36 144
Msa0647980 AT3G16060.1 33.819 343 178 9 13 317 162 493 3.87e-36 146
Msa0647980 AT3G50240.3 33.138 341 173 9 81 374 3 335 4.25e-36 147
Msa0647980 AT5G54670.3 32.312 359 185 10 4 311 317 668 8.54e-36 145
Msa0647980 AT5G54670.1 32.312 359 185 10 4 311 377 728 1.24e-35 145
Msa0647980 AT5G54670.2 32.312 359 185 10 4 311 377 728 1.24e-35 145
Msa0647980 AT2G22610.2 30.583 412 218 14 7 377 400 784 2.14e-35 145
Msa0647980 AT4G27180.1 31.476 359 188 8 4 311 368 719 4.10e-35 143
Msa0647980 AT4G27180.2 31.476 359 188 8 4 311 368 719 4.10e-35 143
Msa0647980 AT3G44730.2 37.891 256 125 8 76 310 502 744 1.58e-34 142
Msa0647980 AT3G44730.3 37.891 256 125 8 76 310 502 744 1.58e-34 142
Msa0647980 AT3G44730.1 37.891 256 125 8 76 310 457 699 1.83e-34 142
Msa0647980 AT3G44730.4 37.891 256 125 8 76 310 457 699 1.83e-34 142
Msa0647980 AT4G05190.2 35.878 262 136 5 76 311 496 751 2.73e-34 141
Msa0647980 AT5G41310.1 33.705 359 176 14 43 388 477 786 2.76e-34 142
Msa0647980 AT4G05190.1 35.878 262 136 5 76 311 509 764 2.76e-34 141
Msa0647980 AT1G18410.3 37.349 249 136 6 76 310 569 811 4.90e-34 141
Msa0647980 AT1G18410.2 37.349 249 136 6 76 310 569 811 4.90e-34 141
Msa0647980 AT1G18410.4 32.022 356 196 12 76 411 712 1041 8.36e-34 140
Msa0647980 AT3G10310.1 38.735 253 127 7 76 310 441 683 1.13e-33 139
Msa0647980 AT3G10310.2 38.735 253 127 7 76 310 441 683 1.39e-33 139
Msa0647980 AT1G12430.1 30.645 372 202 8 24 342 70 438 1.70e-33 139
Msa0647980 AT1G12430.2 30.645 372 202 8 24 342 70 438 1.78e-33 139
Msa0647980 AT1G73860.1 32.710 321 175 10 76 379 589 885 2.14e-33 139
Msa0647980 AT1G73860.2 32.710 321 175 10 76 379 506 802 2.24e-33 139
Msa0647980 AT5G27550.2 32.160 426 208 15 25 410 133 517 2.38e-33 138
Msa0647980 AT5G27550.1 32.160 426 208 15 25 410 133 517 2.38e-33 138
Msa0647980 AT4G21270.1 35.115 262 138 5 76 311 512 767 2.93e-33 138
Msa0647980 AT1G18410.5 37.398 246 132 6 76 310 559 793 1.08e-32 137
Msa0647980 AT1G18410.1 32.011 353 192 12 76 411 712 1033 1.34e-32 136
Msa0647980 AT3G54870.3 31.214 346 183 11 69 393 179 490 1.42e-32 136
Msa0647980 AT3G54870.1 31.214 346 183 11 69 393 179 490 1.42e-32 136
Msa0647980 AT3G54870.2 31.214 346 183 11 69 393 179 490 1.47e-32 136
Msa0647980 AT1G63640.1 33.227 313 169 9 76 372 552 840 1.81e-32 136
Msa0647980 AT1G63640.4 33.227 313 169 9 76 372 552 840 1.81e-32 136
Msa0647980 AT1G63640.3 33.227 313 169 9 76 372 552 840 1.84e-32 136
Msa0647980 AT1G63640.5 33.227 313 169 9 76 372 542 830 1.93e-32 136
Msa0647980 AT1G63640.2 33.654 312 162 10 76 372 552 833 2.17e-32 135
Msa0647980 AT2G22610.3 25.944 609 368 21 7 538 401 1003 7.61e-32 134
Msa0647980 AT2G22610.1 25.944 609 368 21 7 538 400 1002 7.74e-32 134
Msa0647980 AT1G01950.2 27.546 432 228 11 16 391 55 457 1.50e-31 132
Msa0647980 AT1G01950.1 27.546 432 228 11 16 391 55 457 1.85e-31 132
Msa0647980 AT1G09170.6 37.885 227 122 6 76 289 513 733 1.98e-31 132
Msa0647980 AT1G09170.8 37.885 227 122 6 76 289 513 733 1.98e-31 132
Msa0647980 AT1G01950.3 27.546 432 228 11 16 391 55 457 2.12e-31 132
Msa0647980 AT3G16630.2 30.904 343 180 8 24 317 193 527 1.10e-30 130
Msa0647980 AT3G16630.1 30.904 343 180 8 24 317 193 527 1.10e-30 130
Msa0647980 AT1G01950.4 28.824 340 193 7 77 391 1 316 3.96e-29 125
Msa0647980 AT1G72250.1 28.761 452 263 16 4 406 472 913 7.98e-29 124
Msa0647980 AT1G72250.4 28.761 452 263 16 4 406 492 933 8.08e-29 124
Msa0647980 AT1G72250.3 28.761 452 263 16 4 406 493 934 8.23e-29 124
Msa0647980 AT1G72250.2 28.761 452 263 16 4 406 481 922 9.29e-29 124
Msa0647980 AT1G09170.1 32.333 300 156 9 76 363 513 777 1.83e-28 123
Msa0647980 AT1G55550.1 33.333 294 161 8 74 345 162 442 2.25e-28 122
Msa0647980 AT5G02370.1 30.739 257 154 7 74 323 108 347 1.63e-27 118
Msa0647980 AT3G20150.2 28.254 315 190 6 75 356 170 481 1.55e-26 117
Msa0647980 AT3G20150.1 28.254 315 190 6 75 356 170 481 1.62e-26 117
Msa0647980 AT5G27950.1 31.655 278 160 7 76 337 153 416 2.74e-24 108
Msa0647980 AT5G27950.2 30.078 256 155 6 92 337 9 250 5.41e-19 91.3
Msa0647980 AT5G65460.2 31.349 252 148 8 74 314 213 450 4.84e-18 90.1
Msa0647980 AT5G65460.6 31.349 252 148 8 74 314 213 450 4.85e-18 90.1
Msa0647980 AT5G65460.1 31.349 252 148 8 74 314 213 450 5.61e-18 89.7
Msa0647980 AT5G65460.4 31.349 252 148 8 74 314 213 450 5.62e-18 89.7
Msa0647980 AT5G65460.3 30.116 259 149 7 74 314 213 457 1.88e-17 88.2
Msa0647980 AT5G10470.2 29.365 252 153 7 74 314 217 454 1.12e-14 79.3
Msa0647980 AT5G10470.1 29.365 252 153 7 74 314 217 454 1.20e-14 79.0
Msa0647980 AT4G14330.1 27.586 261 149 8 75 314 124 365 1.31e-14 78.6
Msa0647980 AT5G23910.2 28.194 227 139 8 74 293 92 301 2.00e-14 77.8
Msa0647980 AT5G23910.1 28.194 227 139 8 74 293 88 297 2.20e-14 77.8

Find 205 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGTTCTGCCAGGGAATTTC+TGG 0.153690 4_3:+54335967 Msa0647980:CDS
TGCAGCTAGCAGACCGTTTA+TGG 0.204765 4_3:+54338819 Msa0647980:CDS
TTTGGCAGGAAGAAGATTTA+TGG 0.227161 4_3:+54337002 Msa0647980:intron
TCCTGTCTGTGTCTGGTGTC+TGG 0.233218 4_3:-54333273 None:intergenic
TCAGATGGATAAGGAAATTA+AGG 0.238308 4_3:+54336782 Msa0647980:intron
CACATACCAATCTGATAATT+TGG 0.239249 4_3:-54335861 None:intergenic
TTCCTCCTTGCTGCAAATTA+AGG 0.242724 4_3:+54339311 Msa0647980:three_prime_UTR
AAGCTCTACCTCCATGTAAA+TGG 0.274251 4_3:-54338480 None:intergenic
AAGTAGGTCCTGTGGGTTAA+TGG 0.288853 4_3:-54338425 None:intergenic
AACGATTCTCAGTCTTCTAT+TGG 0.293108 4_3:+54337672 Msa0647980:intron
ACAGTATCTGGAGGGGAAAA+TGG 0.295774 4_3:+54337373 Msa0647980:CDS
GATTTGGCTTTGACAGTATC+TGG 0.301840 4_3:+54337361 Msa0647980:CDS
CTTAAGTGACAACGGGGATT+TGG 0.305652 4_3:+54337345 Msa0647980:CDS
TACATTAACCTGTGCTTTAG+TGG 0.313427 4_3:-54336525 None:intergenic
CATAAACCATCTGGTCTTCC+AGG 0.318695 4_3:-54337600 None:intergenic
TCAAATGTGTAGACATTTCC+TGG 0.325306 4_3:-54337402 None:intergenic
TAAGTAAACTCCGGTTTATA+TGG 0.325660 4_3:-54336209 None:intergenic
GAAAGATCAGATATCTAAAA+AGG 0.331016 4_3:+54336866 Msa0647980:CDS
ATCTCAAGCTGTTGCCTCTA+AGG 0.331700 4_3:-54337713 None:intergenic
ATACAAACTACTCACTTTAG+AGG 0.353065 4_3:+54339140 Msa0647980:three_prime_UTR
TTTAATTATTCAGATGGATA+AGG 0.359650 4_3:+54336773 Msa0647980:intron
TCATCCCAGCAACAAAAGTA+TGG 0.377323 4_3:-54337764 None:intergenic
TTTCCAAGTGCCTACACATT+TGG 0.377835 4_3:+54334248 Msa0647980:CDS
CCTGTCTGTGTCTGGTGTCT+GGG 0.379629 4_3:-54333272 None:intergenic
TGCTAATGAATCTGCAGATT+GGG 0.381276 4_3:+54334169 Msa0647980:CDS
TGCTAATATACGTCTTCATT+AGG 0.391068 4_3:+54339045 Msa0647980:three_prime_UTR
AACTTACTACACTAGCTGAT+AGG 0.394326 4_3:-54336009 None:intergenic
TTGGCAGGAAGAAGATTTAT+GGG 0.394933 4_3:+54337003 Msa0647980:intron
ATTATTCTTCTTTATGATCT+CGG 0.398338 4_3:+54333099 Msa0647980:five_prime_UTR
GACCAGTCTAAAGGAGTTCC+TGG 0.404750 4_3:-54338344 None:intergenic
CAAATCCCCGTTGTCACTTA+AGG 0.405474 4_3:-54337344 None:intergenic
ATCCGTCCTTAAGTGACAAC+GGG 0.408908 4_3:+54337338 Msa0647980:CDS
ATTGTATCGTATCGCCATTA+TGG 0.409503 4_3:+54339245 Msa0647980:three_prime_UTR
AGAGGAGACTCTACAGGATT+GGG 0.412152 4_3:+54335488 Msa0647980:CDS
TCTGGCTGTCTTTCTCAGAC+TGG 0.414517 4_3:-54338544 None:intergenic
AACCTTCACGCAATGTATTC+CGG 0.415906 4_3:-54334220 None:intergenic
GCATCTCAGGTATCATCAGC+TGG 0.417129 4_3:+54336165 Msa0647980:CDS
CGAGCCCTCAAGGAGATGTT+TGG 0.417430 4_3:+54338917 Msa0647980:CDS
CTGCTAATGAATCTGCAGAT+TGG 0.419350 4_3:+54334168 Msa0647980:CDS
AGGGAGCGAGCGTGCATCTC+AGG 0.420236 4_3:+54336152 Msa0647980:CDS
AGAAGATTCTTGTGTTACTT+AGG 0.420887 4_3:+54334117 Msa0647980:CDS
GTTCCTGGTGCCTCCTGCAT+TGG 0.421307 4_3:-54338329 None:intergenic
CTGCTTCGAGACAGGAGAAA+TGG 0.421627 4_3:+54337543 Msa0647980:CDS
CAATGGAGAGACACTTGTTT+CGG 0.422658 4_3:-54339172 None:intergenic
CCGTCAGTGGATGACCTTAG+AGG 0.426876 4_3:+54337699 Msa0647980:CDS
GTCAGTGTCCTGTCTGTGTC+TGG 0.427854 4_3:-54333280 None:intergenic
GGCAACAGCTTGAGATCATC+TGG 0.430160 4_3:+54337720 Msa0647980:CDS
AATTCCTTTACCTTCACAAA+AGG 0.433816 4_3:-54335532 None:intergenic
AACTAGAAGCCGGAGTTGTT+CGG 0.440145 4_3:+54337498 Msa0647980:CDS
CTCTGTAAGTTTCTCTAGAA+CGG 0.444093 4_3:-54335469 None:intergenic
TTCCCTGGCAGAACTTTCAA+TGG 0.446524 4_3:-54335960 None:intergenic
CTATTTAACGAATGGGGCAT+TGG 0.449067 4_3:+54338773 Msa0647980:CDS
AACTCTCTAATGCGTATGTT+GGG 0.451837 4_3:-54337067 None:intergenic
TATGAAAAGCAGCTTGTTGA+TGG 0.452686 4_3:+54337807 Msa0647980:CDS
AGACAGTCAAATTCGTCATC+TGG 0.453086 4_3:-54339278 None:intergenic
CTGGAGAAGAGTTGTCGAAA+TGG 0.453784 4_3:+54334063 Msa0647980:CDS
TCATTAGGAGTGTGTACAGC+AGG 0.453816 4_3:+54339060 Msa0647980:three_prime_UTR
ATGGAGAGGACGCCATTCAA+TGG 0.453935 4_3:+54337562 Msa0647980:CDS
TATCAGTGTTGCACCATAAA+CGG 0.454876 4_3:-54338832 None:intergenic
GCCATTCAATGGGTTTGAAA+AGG 0.455508 4_3:+54337573 Msa0647980:CDS
TCTGTAAGTTTCTCTAGAAC+GGG 0.458045 4_3:-54335468 None:intergenic
GAAAAGGCTATTTAACGAAT+GGG 0.464097 4_3:+54338766 Msa0647980:CDS
CAGAGGAGACTCTACAGGAT+TGG 0.465719 4_3:+54335487 Msa0647980:CDS
GAAATTTCCTTCTCATTCAA+AGG 0.470020 4_3:-54334146 None:intergenic
TTCTTGTGTTACTTAGGCTT+AGG 0.470717 4_3:+54334123 Msa0647980:CDS
TGGGATTAGCTTGTTAATTG+AGG 0.472715 4_3:+54333997 Msa0647980:five_prime_UTR
CTTCTTTGCAGTATTCATCA+AGG 0.474289 4_3:-54337264 None:intergenic
TGGGTTTGAAAAGGATTCCC+TGG 0.475932 4_3:+54337582 Msa0647980:CDS
CTGTCTCCACTATTATATTG+AGG 0.476344 4_3:-54337097 None:intergenic
AAGAAGGTTGCCATATAAAC+CGG 0.478479 4_3:+54336199 Msa0647980:CDS
CAATCTCTACATGCCATGTC+AGG 0.480188 4_3:+54337445 Msa0647980:CDS
CAGTGGAAAGACATATACTA+TGG 0.482105 4_3:+54335045 Msa0647980:CDS
CGCATACTGCAGCCTTGCTT+AGG 0.486895 4_3:+54336398 Msa0647980:CDS
ATCTCACCAAATTATCAGAT+TGG 0.487669 4_3:+54335855 Msa0647980:CDS
AACGTGATCTTGCTGAATCA+AGG 0.488340 4_3:+54336817 Msa0647980:CDS
TCCTTTGCCCAGAAATTCCC+TGG 0.488533 4_3:-54335975 None:intergenic
TCAGAGTCCTCAAGCATTTG+TGG 0.489326 4_3:+54337043 Msa0647980:CDS
TTGAAGTTAACGTGATTGTC+TGG 0.489517 4_3:-54338562 None:intergenic
GCTTCCCACTGCTTCGAGAC+AGG 0.489838 4_3:+54337535 Msa0647980:CDS
TGGAGAGGACGCCATTCAAT+GGG 0.490245 4_3:+54337563 Msa0647980:CDS
TTACCAAATGTGTAGGCACT+TGG 0.492018 4_3:-54334251 None:intergenic
ACAAACAGATTCCATTTACA+TGG 0.493660 4_3:+54338469 Msa0647980:CDS
AGACAATCACGTTAACTTCA+AGG 0.495649 4_3:+54338564 Msa0647980:CDS
TTATGAAGCTTATGCGGAAG+AGG 0.496180 4_3:+54338726 Msa0647980:CDS
TAACACGGCGAAGCTATTCA+TGG 0.498028 4_3:+54338960 Msa0647980:CDS
TAATCAGTGTTGGAGGTAGC+AGG 0.499690 4_3:-54336620 None:intergenic
CTTTACCTTCACAAAAGGAT+AGG 0.501285 4_3:-54335527 None:intergenic
TAATGTAGTGATGTCTGATA+AGG 0.501558 4_3:+54336541 Msa0647980:CDS
CTGGTACAACATAACCATAA+TGG 0.502481 4_3:-54339259 None:intergenic
GGAAAGACATATACTATGGT+TGG 0.503643 4_3:+54335049 Msa0647980:CDS
AACAATCCTCAATATAATAG+TGG 0.503991 4_3:+54337091 Msa0647980:CDS
TGGAGAAGAGTTGTCGAAAT+GGG 0.504063 4_3:+54334064 Msa0647980:CDS
TCTTTATGATCTCGGTGTGT+CGG 0.506170 4_3:+54333107 Msa0647980:five_prime_UTR
GCCAGGGAATTTCTGGGCAA+AGG 0.507390 4_3:+54335974 Msa0647980:CDS
GCTTAGGCCTTTGAATGAGA+AGG 0.507783 4_3:+54334139 Msa0647980:CDS
AATACACATATCTATCTCAA+TGG 0.510126 4_3:-54339189 None:intergenic
AGTTCTGCCAGGGAATTTCT+GGG 0.510390 4_3:+54335968 Msa0647980:CDS
GAAAGATCAACAGATAGAAA+AGG 0.513788 4_3:+54336661 Msa0647980:CDS
TTTCTGAGGAAGAGAGGAAA+AGG 0.515753 4_3:+54338750 Msa0647980:CDS
TCGAAATGGGAGAAGATGAA+TGG 0.517570 4_3:+54334077 Msa0647980:CDS
ATTTGACATGTTTCCTGACA+TGG 0.518750 4_3:-54337458 None:intergenic
AAGTCCAAACATCTCCTTGA+GGG 0.519271 4_3:-54338921 None:intergenic
TGTTGCTGGGATGAAAGAAA+TGG 0.520014 4_3:+54337773 Msa0647980:CDS
CATCTCAGGTATCATCAGCT+GGG 0.520906 4_3:+54336166 Msa0647980:CDS
AAAGCAGCTTGTTGATGGTC+AGG 0.521553 4_3:+54337812 Msa0647980:CDS
AGACCATTGAAAGTTCTGCC+AGG 0.523244 4_3:+54335957 Msa0647980:intron
TGTTCAACATGACTCCGTGC+AGG 0.523415 4_3:-54336458 None:intergenic
CAAAGCTACATAATCAGTGT+TGG 0.525785 4_3:-54336630 None:intergenic
GACACAGTGTGAGAGCTCTT+CGG 0.528394 4_3:+54338687 Msa0647980:intron
ACTTACTACACTAGCTGATA+GGG 0.529106 4_3:-54336008 None:intergenic
CTTGCAGCTCAGAGACAAGT+AGG 0.530862 4_3:+54335802 Msa0647980:intron
GAGAAGATGAATGGAGTTAG+TGG 0.531131 4_3:+54334086 Msa0647980:CDS
CCCAGACACCAGACACAGAC+AGG 0.532884 4_3:+54333272 Msa0647980:five_prime_UTR
GATCCAATGCAGGAGGCACC+AGG 0.532906 4_3:+54338326 Msa0647980:CDS
TGAGGATTTGCTGCGCATGG+TGG 0.534211 4_3:+54336842 Msa0647980:CDS
AACTGCAGAGACCAGTCTAA+AGG 0.537534 4_3:-54338353 None:intergenic
AAAGAGTTGGCCAGGTTGGA+AGG 0.537609 4_3:+54336584 Msa0647980:CDS
GTATATTAGCAATGCCACTT+TGG 0.538179 4_3:-54339033 None:intergenic
TCTTGCTGAATCAAGGATTG+AGG 0.544535 4_3:+54336824 Msa0647980:CDS
ATCACAAATTAACTAGAAGC+CGG 0.545574 4_3:+54337488 Msa0647980:CDS
CCTAAACAAAAGAAAGAAGT+AGG 0.545806 4_3:-54338441 None:intergenic
AGAGCAGGGACGAGCCCTCA+AGG 0.546310 4_3:+54338907 Msa0647980:CDS
ACTTACAGAGGAGACTCTAC+AGG 0.547856 4_3:+54335482 Msa0647980:CDS
TTGGATTGAATTCAAAGCGC+AGG 0.548324 4_3:+54338792 Msa0647980:CDS
CTGAGGAATGTGAAAGATGT+AGG 0.548594 4_3:+54338299 Msa0647980:CDS
GGAAAAGGCTATTTAACGAA+TGG 0.550100 4_3:+54338765 Msa0647980:CDS
ATACTGCAGCCTTGCTTAGG+TGG 0.551117 4_3:+54336401 Msa0647980:CDS
GATTAGCTTGTTAATTGAGG+TGG 0.551277 4_3:+54334000 Msa0647980:five_prime_UTR
CAACCTCAGCTTACGAATGA+CGG 0.553205 4_3:-54336241 None:intergenic
GGCTTTGACAGTATCTGGAG+GGG 0.554999 4_3:+54337366 Msa0647980:CDS
CGACCGTCATTCGTAAGCTG+AGG 0.556042 4_3:+54336238 Msa0647980:CDS
TTTCTCCTGTCTCGAAGCAG+TGG 0.556239 4_3:-54337540 None:intergenic
GGATCATCACGCAACCTAAG+TGG 0.556914 4_3:-54335334 None:intergenic
AACTGAATCATTTGAAACAC+AGG 0.558277 4_3:-54333214 None:intergenic
TGTAGGTGTTGATCCAATGC+AGG 0.558725 4_3:+54338316 Msa0647980:CDS
GAGGATTTGCTGCGCATGGT+GGG 0.558929 4_3:+54336843 Msa0647980:CDS
GTTCAACATGACTCCGTGCA+GGG 0.560044 4_3:-54336457 None:intergenic
CAGTGTGAGAGCTCTTCGGC+GGG 0.560979 4_3:+54338691 Msa0647980:intron
CAATAGTTGCGAGGCTAGTG+AGG 0.563553 4_3:+54338879 Msa0647980:CDS
AGCTACATAATCAGTGTTGG+AGG 0.564822 4_3:-54336627 None:intergenic
AGAAGTTCGATGTGTCGAGT+TGG 0.565179 4_3:+54337282 Msa0647980:CDS
AATACAACCCTCTAGAATGT+AGG 0.566519 4_3:-54339220 None:intergenic
GACCATTGAAAGTTCTGCCA+GGG 0.568444 4_3:+54335958 Msa0647980:intron
GCATATGGGCAAACAAGCAG+TGG 0.571286 4_3:+54335028 Msa0647980:CDS
AGGGGAAAATGGAACAAGCC+AGG 0.572223 4_3:+54337384 Msa0647980:CDS
ACTATTAACCTACATTCTAG+AGG 0.572333 4_3:+54339212 Msa0647980:three_prime_UTR
GAACTCTCTAATGCGTATGT+TGG 0.572921 4_3:-54337068 None:intergenic
CTATTAACCTACATTCTAGA+GGG 0.574371 4_3:+54339213 Msa0647980:three_prime_UTR
GGATTCCCTGGAAGACCAGA+TGG 0.574754 4_3:+54337594 Msa0647980:CDS
CACCAGGAACTCCTTTAGAC+TGG 0.575102 4_3:+54338342 Msa0647980:CDS
AAGAAAGAAGTAGGTCCTGT+GGG 0.577186 4_3:-54338432 None:intergenic
AGAGGCTTTCTGAGGAAGAG+AGG 0.579952 4_3:+54338744 Msa0647980:CDS
TGTGATGCTCCGAACAACTC+CGG 0.580662 4_3:-54337507 None:intergenic
GCACTGACAACACTCCACTT+AGG 0.581250 4_3:+54335320 Msa0647980:CDS
AGTGATGTCTGATAAGGCCT+TGG 0.583008 4_3:+54336547 Msa0647980:CDS
TTCTCCTGTCTCGAAGCAGT+GGG 0.583645 4_3:-54337539 None:intergenic
TTCTATTGGAAGTCCGTCAG+TGG 0.593519 4_3:+54337686 Msa0647980:CDS
TGGCTTTGACAGTATCTGGA+GGG 0.594075 4_3:+54337365 Msa0647980:CDS
ACTGGTCTCTGCAGTTCAAG+AGG 0.598036 4_3:+54338360 Msa0647980:CDS
CTTGAGATCATCTGGTGATG+AGG 0.598316 4_3:+54337728 Msa0647980:CDS
TATGCGGAAGAGGCTTTCTG+AGG 0.600165 4_3:+54338736 Msa0647980:CDS
GAATGCAGTAAGGGAAGACA+TGG 0.600216 4_3:+54336344 Msa0647980:intron
TACCGGAATACATTGCGTGA+AGG 0.600495 4_3:+54334218 Msa0647980:CDS
ATTTAACTTACCAAATGTGT+AGG 0.602058 4_3:-54334258 None:intergenic
GACAGTGGAAGTATTCAAGA+TGG 0.602866 4_3:+54337115 Msa0647980:CDS
GCTTCACACCTCAGCTAACA+CGG 0.603431 4_3:+54338945 Msa0647980:CDS
AGAAGTTACCACTAAAGCAC+AGG 0.604313 4_3:+54336517 Msa0647980:CDS
CTAGCATTGCCACCTAAGCA+AGG 0.606325 4_3:-54336410 None:intergenic
ATAAACCATCTGGTCTTCCA+GGG 0.610955 4_3:-54337599 None:intergenic
AAAGAAAGAAGTAGGTCCTG+TGG 0.614224 4_3:-54338433 None:intergenic
GATTGAGGATTTGCTGCGCA+TGG 0.614235 4_3:+54336839 Msa0647980:CDS
TTTGCACTTTGAGCCCTGCA+CGG 0.615755 4_3:+54336444 Msa0647980:CDS
GAGGAGACTCTACAGGATTG+GGG 0.620881 4_3:+54335489 Msa0647980:CDS
GCTATGTACCATTAACCCAC+AGG 0.622275 4_3:+54338417 Msa0647980:CDS
TAGCTTCGCCGTGTTAGCTG+AGG 0.622747 4_3:-54338953 None:intergenic
AAATGCTTATGAAGCTTATG+CGG 0.625303 4_3:+54338720 Msa0647980:CDS
TACTACACTAGCTGATAGGG+TGG 0.625784 4_3:-54336005 None:intergenic
CATGTAGAGATTGTTCATCA+TGG 0.628406 4_3:-54337435 None:intergenic
TCCCCGTTGTCACTTAAGGA+CGG 0.631420 4_3:-54337340 None:intergenic
CCTCTAAGGTCATCCACTGA+CGG 0.638852 4_3:-54337699 None:intergenic
TTGGCTTTGACAGTATCTGG+AGG 0.640008 4_3:+54337364 Msa0647980:CDS
TTGCAGCACTCTGCATTACG+TGG 0.640783 4_3:-54338859 None:intergenic
AACCTTAATTTGCAGCAAGG+AGG 0.643967 4_3:-54339313 None:intergenic
GCTGGGGTGAGATTGAAAGA+AGG 0.644962 4_3:+54336183 Msa0647980:CDS
CATTAGGAGTGTGTACAGCA+GGG 0.646177 4_3:+54339061 Msa0647980:three_prime_UTR
ACAAACCTTAATTTGCAGCA+AGG 0.646264 4_3:-54339316 None:intergenic
CAATATAATAGTGGAGACAG+TGG 0.646811 4_3:+54337100 Msa0647980:CDS
GATCCGTCCTTAAGTGACAA+CGG 0.648355 4_3:+54337337 Msa0647980:CDS
ATCTCAGGTATCATCAGCTG+GGG 0.651883 4_3:+54336167 Msa0647980:CDS
AAAAGGCTATTTAACGAATG+GGG 0.654647 4_3:+54338767 Msa0647980:CDS
AGGATTTGCTGCGCATGGTG+GGG 0.662984 4_3:+54336844 Msa0647980:CDS
GTTGGGACCACAAATGCTTG+AGG 0.665970 4_3:-54337050 None:intergenic
TCGAGACAGGAGAAATGGAG+AGG 0.670286 4_3:+54337548 Msa0647980:CDS
ACAGTGTGAGAGCTCTTCGG+CGG 0.670786 4_3:+54338690 Msa0647980:intron
TCGAAAGAGTAAGTAAACTC+CGG 0.675211 4_3:-54336218 None:intergenic
TGAATCATTTGAAACACAGG+AGG 0.678773 4_3:-54333211 None:intergenic
AGGAGACTCTACAGGATTGG+GGG 0.680080 4_3:+54335490 Msa0647980:CDS
AGGTGTTGATCCAATGCAGG+AGG 0.686174 4_3:+54338319 Msa0647980:CDS
AACAGATTCCATTTACATGG+AGG 0.691503 4_3:+54338472 Msa0647980:CDS
AGAGTGCTGCAATAGTTGCG+AGG 0.694058 4_3:+54338870 Msa0647980:CDS
TAGGTTGCGTGATGATCCTG+AGG 0.705593 4_3:+54335339 Msa0647980:CDS
AGGAGACAGATAGAAAACTG+AGG 0.728366 4_3:+54338282 Msa0647980:CDS
TAAGTCCAAACATCTCCTTG+AGG 0.730477 4_3:-54338922 None:intergenic
CGTTCTAGAGAAACTTACAG+AGG 0.745619 4_3:+54335470 Msa0647980:CDS
TCCGTCCTTAAGTGACAACG+GGG 0.757636 4_3:+54337339 Msa0647980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTCTATATATCTTTTT+CGG + chr4_3:54333137-54333156 Msa0647980:five_prime_UTR 10.0%
!! TAATTATTAATATTAATGCA+AGG - chr4_3:54336976-54336995 None:intergenic 10.0%
!! TATTAATAATTATCTTGATT+TGG + chr4_3:54336984-54337003 Msa0647980:intron 10.0%
!!! TCTATTCTAAAAATCATAAT+TGG + chr4_3:54333454-54333473 Msa0647980:intron 15.0%
!! TCATAAATTAATCATAATGA+TGG - chr4_3:54333861-54333880 None:intergenic 15.0%
!! CTAAATCAATTTACATAAAT+TGG + chr4_3:54334580-54334599 Msa0647980:intron 15.0%
!!! TATAAAGATATCTTTTTTAG+AGG - chr4_3:54337995-54338014 None:intergenic 15.0%
!! ATTATTCTTCTTTATGATCT+CGG + chr4_3:54333099-54333118 Msa0647980:five_prime_UTR 20.0%
!!! TTAGAATAGAAAACTTTTTC+TGG - chr4_3:54333444-54333463 None:intergenic 20.0%
!! TTAATGTTGATATGAACATT+TGG + chr4_3:54334535-54334554 Msa0647980:intron 20.0%
!! TCAATTTACATAAATTGGTA+AGG + chr4_3:54334585-54334604 Msa0647980:intron 20.0%
!!! ATATTTTTGACTATGCAAAA+AGG + chr4_3:54335095-54335114 Msa0647980:CDS 20.0%
!!! TATTTTTGACTATGCAAAAA+GGG + chr4_3:54335096-54335115 Msa0647980:CDS 20.0%
!!! TGAATGCCTTTTAAATATAT+TGG + chr4_3:54335362-54335381 Msa0647980:intron 20.0%
!! ATCAGTCCAATATATTTAAA+AGG - chr4_3:54335371-54335390 None:intergenic 20.0%
!! GATACAAGTTTAATACATAA+AGG + chr4_3:54335393-54335412 Msa0647980:intron 20.0%
!!! TAGCTTTCTTGTTATATATA+TGG + chr4_3:54335559-54335578 Msa0647980:intron 20.0%
!! AAAATAAATTAAACTTCCGA+GGG - chr4_3:54336276-54336295 None:intergenic 20.0%
!!! ACGAATTTTAATTATTCAGA+TGG + chr4_3:54336767-54336786 Msa0647980:intron 20.0%
!! TTTAATTATTCAGATGGATA+AGG + chr4_3:54336773-54336792 Msa0647980:intron 20.0%
!! CTAACAAATAAAATAATGAC+CGG - chr4_3:54337222-54337241 None:intergenic 20.0%
!! TTCAATCCATTAAATTTAGA+TGG + chr4_3:54337630-54337649 Msa0647980:intron 20.0%
!! ATGAAATTCAAGAAACAATA+AGG - chr4_3:54337860-54337879 None:intergenic 20.0%
!!! ATAAGTCACTTCTTTTTTTA+GGG + chr4_3:54337911-54337930 Msa0647980:intron 20.0%
!!! AAAATTTTGTTACCAGATAT+AGG + chr4_3:54338045-54338064 Msa0647980:intron 20.0%
!! ACATGATTATATTTATATGC+AGG + chr4_3:54338181-54338200 Msa0647980:intron 20.0%
!!! TGATATATTTAGAATCTAAG+TGG + chr4_3:54338623-54338642 Msa0647980:intron 20.0%
!! AAAACAAAAAAGAATGACTA+AGG - chr4_3:54339007-54339026 None:intergenic 20.0%
!!! CTCTGTTTTTTCAAAATCAT+CGG - chr4_3:54333314-54333333 None:intergenic 25.0%
!!! TTTTGAAAAAACAGAGAACA+AGG + chr4_3:54333318-54333337 Msa0647980:five_prime_UTR 25.0%
! ATAGTGTAAACTGAAAAACA+AGG + chr4_3:54333345-54333364 Msa0647980:five_prime_UTR 25.0%
!!! CAAAGTAACAGATTTTTTAC+TGG - chr4_3:54333392-54333411 None:intergenic 25.0%
! AAAAGAGAAAAAGTGATGAT+GGG - chr4_3:54333523-54333542 None:intergenic 25.0%
! AAAAAGAGAAAAAGTGATGA+TGG - chr4_3:54333524-54333543 None:intergenic 25.0%
!!! TATAACAGAAGTCTTGTTTT+TGG + chr4_3:54333653-54333672 Msa0647980:intron 25.0%
!! ACGTTTTTATCATAGTTAGT+TGG - chr4_3:54333693-54333712 None:intergenic 25.0%
! TTATTAACTACCGCAATTAA+TGG + chr4_3:54333806-54333825 Msa0647980:intron 25.0%
! TATTAACTACCGCAATTAAT+GGG + chr4_3:54333807-54333826 Msa0647980:intron 25.0%
! TAACAAAAACCCATTAATTG+CGG - chr4_3:54333819-54333838 None:intergenic 25.0%
! TAAAAGAGAAAAAGTGAAAC+GGG - chr4_3:54333954-54333973 None:intergenic 25.0%
! CTAAAAGAGAAAAAGTGAAA+CGG - chr4_3:54333955-54333974 None:intergenic 25.0%
!!! TTTTTCTCTTTTAGGAAACA+TGG + chr4_3:54333961-54333980 Msa0647980:intron 25.0%
!!! TTTTCTCTTTTAGGAAACAT+GGG + chr4_3:54333962-54333981 Msa0647980:intron 25.0%
!! ATGATACTACAATTTTGTAC+CGG + chr4_3:54334201-54334220 Msa0647980:CDS 25.0%
!! ATTTAACTTACCAAATGTGT+AGG - chr4_3:54334261-54334280 None:intergenic 25.0%
! AAGTTAAGACCATGTAAATT+GGG - chr4_3:54334505-54334524 None:intergenic 25.0%
! AAAGTTAAGACCATGTAAAT+TGG - chr4_3:54334506-54334525 None:intergenic 25.0%
!!! GTTTGACAGTTTTTTTTTGA+AGG - chr4_3:54334634-54334653 None:intergenic 25.0%
! TCGATATAAATATCCAAGTT+TGG - chr4_3:54334675-54334694 None:intergenic 25.0%
! TATTATACACATCAGATTGA+TGG + chr4_3:54334765-54334784 Msa0647980:intron 25.0%
!!! TTCTGAATTTTTGTTGTGAT+TGG + chr4_3:54334810-54334829 Msa0647980:intron 25.0%
! TATTTAACATTGGATGCAAT+GGG - chr4_3:54335602-54335621 None:intergenic 25.0%
! TTGAAAAGTAGTGACTATAA+CGG + chr4_3:54335692-54335711 Msa0647980:intron 25.0%
! TTTAAATCCATCACTTATTC+AGG + chr4_3:54336039-54336058 Msa0647980:intron 25.0%
! TTAAATCCATCACTTATTCA+GGG + chr4_3:54336040-54336059 Msa0647980:intron 25.0%
! CAAAATAAATTAAACTTCCG+AGG - chr4_3:54336277-54336296 None:intergenic 25.0%
! GAAAGATCAGATATCTAAAA+AGG + chr4_3:54336866-54336885 Msa0647980:CDS 25.0%
!!! AATAATTATCTTGATTTGGC+AGG + chr4_3:54336988-54337007 Msa0647980:intron 25.0%
! AACAATCCTCAATATAATAG+TGG + chr4_3:54337091-54337110 Msa0647980:CDS 25.0%
! TATACAGGAAGGAATATAAA+AGG - chr4_3:54337146-54337165 None:intergenic 25.0%
! AAACTATTTACTATACAGGA+AGG - chr4_3:54337157-54337176 None:intergenic 25.0%
! TTCCTGTATAGTAAATAGTT+TGG + chr4_3:54337156-54337175 Msa0647980:intron 25.0%
! TACCAAACTATTTACTATAC+AGG - chr4_3:54337161-54337180 None:intergenic 25.0%
! GTTGAACCATCTAAATTTAA+TGG - chr4_3:54337639-54337658 None:intergenic 25.0%
!!! CATAAGTCACTTCTTTTTTT+AGG + chr4_3:54337910-54337929 Msa0647980:intron 25.0%
!!! TATAGAGGTATCTTTTTTAG+AGG - chr4_3:54338026-54338045 None:intergenic 25.0%
!! CTGGTAACAAAATTTTATAG+AGG - chr4_3:54338041-54338060 None:intergenic 25.0%
! TATTAGCAAACATGGATATA+TGG + chr4_3:54338154-54338173 Msa0647980:intron 25.0%
! ATTAGCAAACATGGATATAT+GGG + chr4_3:54338155-54338174 Msa0647980:intron 25.0%
! AAAAAGAGATAATTGAACTG+TGG + chr4_3:54338387-54338406 Msa0647980:CDS 25.0%
!!! CTACTTCTTTCTTTTGTTTA+GGG + chr4_3:54338442-54338461 Msa0647980:CDS 25.0%
!!! TACTTCTTTCTTTTGTTTAG+GGG + chr4_3:54338443-54338462 Msa0647980:CDS 25.0%
! CATCAAAAAATGTTTCTTTC+AGG - chr4_3:54338520-54338539 None:intergenic 25.0%
! TCACATACTGAAATAAAAGT+AGG - chr4_3:54338606-54338625 None:intergenic 25.0%
! AATACACATATCTATCTCAA+TGG - chr4_3:54339192-54339211 None:intergenic 25.0%
! AACTGAATCATTTGAAACAC+AGG - chr4_3:54333217-54333236 None:intergenic 30.0%
TGTAAACTGAAAAACAAGGT+AGG + chr4_3:54333349-54333368 Msa0647980:intron 30.0%
! TTGTTCTCAAGCATTGTTTA+AGG + chr4_3:54333409-54333428 Msa0647980:intron 30.0%
TCATAATTGGTTACTGTAGA+AGG + chr4_3:54333467-54333486 Msa0647980:intron 30.0%
! TGAAGCTTTGTATCAAAGAA+TGG + chr4_3:54333562-54333581 Msa0647980:intron 30.0%
!!! TAGCATTCTGTTTTTGTCTT+TGG + chr4_3:54333720-54333739 Msa0647980:intron 30.0%
! TGGTCTTTCTTTTTCTTAGT+TGG + chr4_3:54333740-54333759 Msa0647980:intron 30.0%
! TTTTTGTTACCTTCTTCGTT+TGG + chr4_3:54333830-54333849 Msa0647980:intron 30.0%
!!! CGTTTCACTTTTTCTCTTTT+AGG + chr4_3:54333953-54333972 Msa0647980:intron 30.0%
!!! AACATGGGTTGTTTTTGAAA+TGG + chr4_3:54333977-54333996 Msa0647980:five_prime_UTR 30.0%
!!! ACATGGGTTGTTTTTGAAAT+GGG + chr4_3:54333978-54333997 Msa0647980:five_prime_UTR 30.0%
TTAATTGAGGTGGAAAAAGA+GGG + chr4_3:54334010-54334029 Msa0647980:five_prime_UTR 30.0%
GTTTGGAAGTGAGAAAAAAT+GGG + chr4_3:54334032-54334051 Msa0647980:exon 30.0%
!! AGAAGATTCTTGTGTTACTT+AGG + chr4_3:54334117-54334136 Msa0647980:CDS 30.0%
GAAATTTCCTTCTCATTCAA+AGG - chr4_3:54334149-54334168 None:intergenic 30.0%
! AAAAGAGTACATCTAAGCTA+GGG - chr4_3:54334482-54334501 None:intergenic 30.0%
! TACTCTTTTCCCAATTTACA+TGG + chr4_3:54334493-54334512 Msa0647980:intron 30.0%
!! GTCAATTTTTATTTGCCTGT+TGG + chr4_3:54334557-54334576 Msa0647980:intron 30.0%
! TGTAAATTGATTTAGCCAAC+AGG - chr4_3:54334575-54334594 None:intergenic 30.0%
!! TTGTTTTTCTTCTCCAAACT+TGG + chr4_3:54334659-54334678 Msa0647980:intron 30.0%
CTATGTTAATCAAAAGTGGA+AGG - chr4_3:54334977-54334996 None:intergenic 30.0%
!! CTTCCACTTTTGATTAACAT+AGG + chr4_3:54334975-54334994 Msa0647980:intron 30.0%
ACACCTATGTTAATCAAAAG+TGG - chr4_3:54334981-54335000 None:intergenic 30.0%
!! TCAGCAAGTATTTTTGCATA+TGG + chr4_3:54335013-54335032 Msa0647980:intron 30.0%
!! CAGCAAGTATTTTTGCATAT+GGG + chr4_3:54335014-54335033 Msa0647980:intron 30.0%
! AACATAGTGCTATTAACACA+AGG + chr4_3:54335204-54335223 Msa0647980:intron 30.0%
AATTCCTTTACCTTCACAAA+AGG - chr4_3:54335535-54335554 None:intergenic 30.0%
! TTTTGTGAAGGTAAAGGAAT+TGG + chr4_3:54335534-54335553 Msa0647980:intron 30.0%
CTATTTAACATTGGATGCAA+TGG - chr4_3:54335603-54335622 None:intergenic 30.0%
TTGCATCCAATGTTAAATAG+CGG + chr4_3:54335603-54335622 Msa0647980:intron 30.0%
! ATCTTGAACTCTTTTCATTC+AGG - chr4_3:54335837-54335856 None:intergenic 30.0%
ATCTCACCAAATTATCAGAT+TGG + chr4_3:54335855-54335874 Msa0647980:CDS 30.0%
CACATACCAATCTGATAATT+TGG - chr4_3:54335864-54335883 None:intergenic 30.0%
CTCTATTAACTGAAGTCTAT+CGG - chr4_3:54335919-54335938 None:intergenic 30.0%
TAAATCCATCACTTATTCAG+GGG + chr4_3:54336041-54336060 Msa0647980:intron 30.0%
!! TCTGCAGAATTTTGTTGATT+TGG + chr4_3:54336128-54336147 Msa0647980:intron 30.0%
!!! AGAATTTTGTTGATTTGGCA+GGG + chr4_3:54336133-54336152 Msa0647980:intron 30.0%
TAAGTAAACTCCGGTTTATA+TGG - chr4_3:54336212-54336231 None:intergenic 30.0%
TAATGTAGTGATGTCTGATA+AGG + chr4_3:54336541-54336560 Msa0647980:CDS 30.0%
GAAAGATCAACAGATAGAAA+AGG + chr4_3:54336661-54336680 Msa0647980:CDS 30.0%
TTATCAACATGTAAGGAGTA+AGG - chr4_3:54336746-54336765 None:intergenic 30.0%
ATTCGTGTTATCAACATGTA+AGG - chr4_3:54336753-54336772 None:intergenic 30.0%
TCAGATGGATAAGGAAATTA+AGG + chr4_3:54336782-54336801 Msa0647980:intron 30.0%
ACGAGCAAATACAAATTTAG+AGG - chr4_3:54336943-54336962 None:intergenic 30.0%
ATCACAAATTAACTAGAAGC+CGG + chr4_3:54337488-54337507 Msa0647980:CDS 30.0%
! ATGGTTCAACAAGATTTTCA+AGG + chr4_3:54337649-54337668 Msa0647980:intron 30.0%
TTCCTAGATATTAGCAAACA+TGG + chr4_3:54338146-54338165 Msa0647980:intron 30.0%
! ATCCATGTTTGCTAATATCT+AGG - chr4_3:54338151-54338170 None:intergenic 30.0%
! TCATTCTTTTCTGAATTGCA+GGG + chr4_3:54338257-54338276 Msa0647980:intron 30.0%
CCTAAACAAAAGAAAGAAGT+AGG - chr4_3:54338444-54338463 None:intergenic 30.0%
!! CCTACTTCTTTCTTTTGTTT+AGG + chr4_3:54338441-54338460 Msa0647980:CDS 30.0%
ACAAACAGATTCCATTTACA+TGG + chr4_3:54338469-54338488 Msa0647980:CDS 30.0%
!! TGTTGACATGTGTTTGTTTT+GGG + chr4_3:54338665-54338684 Msa0647980:intron 30.0%
AAATGCTTATGAAGCTTATG+CGG + chr4_3:54338720-54338739 Msa0647980:CDS 30.0%
GAAAAGGCTATTTAACGAAT+GGG + chr4_3:54338766-54338785 Msa0647980:CDS 30.0%
AAAAGGCTATTTAACGAATG+GGG + chr4_3:54338767-54338786 Msa0647980:CDS 30.0%
TGCTAATATACGTCTTCATT+AGG + chr4_3:54339045-54339064 Msa0647980:three_prime_UTR 30.0%
ATACAAACTACTCACTTTAG+AGG + chr4_3:54339140-54339159 Msa0647980:three_prime_UTR 30.0%
ACTATTAACCTACATTCTAG+AGG + chr4_3:54339212-54339231 Msa0647980:three_prime_UTR 30.0%
CTATTAACCTACATTCTAGA+GGG + chr4_3:54339213-54339232 Msa0647980:three_prime_UTR 30.0%
! TTTTAATCATTTTCCTCCTC+TGG + chr4_3:54339364-54339383 Msa0647980:three_prime_UTR 30.0%
! TGAATCATTTGAAACACAGG+AGG - chr4_3:54333214-54333233 None:intergenic 35.0%
GAAAAAACAGAGAACAAGGA+TGG + chr4_3:54333322-54333341 Msa0647980:five_prime_UTR 35.0%
! TTCTCAAGCATTGTTTAAGG+TGG + chr4_3:54333412-54333431 Msa0647980:intron 35.0%
AATTGGTTACTGTAGAAGGA+AGG + chr4_3:54333471-54333490 Msa0647980:intron 35.0%
GGTTTCAAATACATGAGTTC+TGG + chr4_3:54333492-54333511 Msa0647980:intron 35.0%
ATGGATTTACCAAACGAAGA+AGG - chr4_3:54333842-54333861 None:intergenic 35.0%
!! TGGGATTAGCTTGTTAATTG+AGG + chr4_3:54333997-54334016 Msa0647980:five_prime_UTR 35.0%
!! GATTAGCTTGTTAATTGAGG+TGG + chr4_3:54334000-54334019 Msa0647980:five_prime_UTR 35.0%
GTTAATTGAGGTGGAAAAAG+AGG + chr4_3:54334009-54334028 Msa0647980:five_prime_UTR 35.0%
GGTTTGGAAGTGAGAAAAAA+TGG + chr4_3:54334031-54334050 Msa0647980:exon 35.0%
!! TTCTTGTGTTACTTAGGCTT+AGG + chr4_3:54334123-54334142 Msa0647980:CDS 35.0%
TGCTAATGAATCTGCAGATT+GGG + chr4_3:54334169-54334188 Msa0647980:CDS 35.0%
TTGATACTTCTAAGTTCGGT+CGG - chr4_3:54334399-54334418 None:intergenic 35.0%
GGGTTTGATACTTCTAAGTT+CGG - chr4_3:54334403-54334422 None:intergenic 35.0%
! GAAAAGAGTACATCTAAGCT+AGG - chr4_3:54334483-54334502 None:intergenic 35.0%
!! TTTTGTTGTGATTGGCACTT+TGG + chr4_3:54334818-54334837 Msa0647980:intron 35.0%
TGTTAATCAAAAGTGGAAGG+TGG - chr4_3:54334974-54334993 None:intergenic 35.0%
CAGTGGAAAGACATATACTA+TGG + chr4_3:54335045-54335064 Msa0647980:CDS 35.0%
GGAAAGACATATACTATGGT+TGG + chr4_3:54335049-54335068 Msa0647980:CDS 35.0%
!! ATTTAAAAGGCATTCACCTC+AGG - chr4_3:54335358-54335377 None:intergenic 35.0%
! GTTTTCCCTTTTTGTTAGAG+AGG + chr4_3:54335444-54335463 Msa0647980:intron 35.0%
!! TCTGTAAGTTTCTCTAGAAC+GGG - chr4_3:54335471-54335490 None:intergenic 35.0%
! CTCTGTAAGTTTCTCTAGAA+CGG - chr4_3:54335472-54335491 None:intergenic 35.0%
CTTTACCTTCACAAAAGGAT+AGG - chr4_3:54335530-54335549 None:intergenic 35.0%
! CTATCCTTTTGTGAAGGTAA+AGG + chr4_3:54335528-54335547 Msa0647980:intron 35.0%
TAATTGCAGATCGCAGAAAA+TGG - chr4_3:54335757-54335776 None:intergenic 35.0%
AGAACTTTCAATGGTCTGAA+AGG - chr4_3:54335954-54335973 None:intergenic 35.0%
ACTTACTACACTAGCTGATA+GGG - chr4_3:54336011-54336030 None:intergenic 35.0%
AACTTACTACACTAGCTGAT+AGG - chr4_3:54336012-54336031 None:intergenic 35.0%
TTTATCCCCTGAATAAGTGA+TGG - chr4_3:54336049-54336068 None:intergenic 35.0%
ATTCAGGGGATAAAATAGTC+AGG + chr4_3:54336055-54336074 Msa0647980:intron 35.0%
TTCAGGGGATAAAATAGTCA+GGG + chr4_3:54336056-54336075 Msa0647980:intron 35.0%
!!! CAGAATTTTGTTGATTTGGC+AGG + chr4_3:54336132-54336151 Msa0647980:intron 35.0%
AAGAAGGTTGCCATATAAAC+CGG + chr4_3:54336199-54336218 Msa0647980:CDS 35.0%
TCGAAAGAGTAAGTAAACTC+CGG - chr4_3:54336221-54336240 None:intergenic 35.0%
TAATGTGTCTGAATGCAGTA+AGG + chr4_3:54336334-54336353 Msa0647980:intron 35.0%
AATGTGTCTGAATGCAGTAA+GGG + chr4_3:54336335-54336354 Msa0647980:intron 35.0%
TACATTAACCTGTGCTTTAG+TGG - chr4_3:54336528-54336547 None:intergenic 35.0%
! TTTTTGCAATTGCTTGACCA+AGG - chr4_3:54336567-54336586 None:intergenic 35.0%
CAAGCAATTGCAAAAAGAGT+TGG + chr4_3:54336571-54336590 Msa0647980:CDS 35.0%
CAAAGCTACATAATCAGTGT+TGG - chr4_3:54336633-54336652 None:intergenic 35.0%
TTTGGCAGGAAGAAGATTTA+TGG + chr4_3:54337002-54337021 Msa0647980:intron 35.0%
TTGGCAGGAAGAAGATTTAT+GGG + chr4_3:54337003-54337022 Msa0647980:intron 35.0%
AACTCTCTAATGCGTATGTT+GGG - chr4_3:54337070-54337089 None:intergenic 35.0%
CTGTCTCCACTATTATATTG+AGG - chr4_3:54337100-54337119 None:intergenic 35.0%
! CAATATAATAGTGGAGACAG+TGG + chr4_3:54337100-54337119 Msa0647980:CDS 35.0%
GAGTAGAATTGAATGATGTC+CGG + chr4_3:54337200-54337219 Msa0647980:intron 35.0%
CTTCTTTGCAGTATTCATCA+AGG - chr4_3:54337267-54337286 None:intergenic 35.0%
TCAAATGTGTAGACATTTCC+TGG - chr4_3:54337405-54337424 None:intergenic 35.0%
CATGTAGAGATTGTTCATCA+TGG - chr4_3:54337438-54337457 None:intergenic 35.0%
ATTTGACATGTTTCCTGACA+TGG - chr4_3:54337461-54337480 None:intergenic 35.0%
! TCCTTTTCAAACCCATTGAA+TGG - chr4_3:54337577-54337596 None:intergenic 35.0%
AACTTTCTCCATAAACCATC+TGG - chr4_3:54337612-54337631 None:intergenic 35.0%
AACGATTCTCAGTCTTCTAT+TGG + chr4_3:54337672-54337691 Msa0647980:intron 35.0%
!! TATGAAAAGCAGCTTGTTGA+TGG + chr4_3:54337807-54337826 Msa0647980:CDS 35.0%
CATCAAGATGTAGATTGTAG+TGG - chr4_3:54338218-54338237 None:intergenic 35.0%
CTGCAATTCAGAAAAGAATG+AGG - chr4_3:54338258-54338277 None:intergenic 35.0%
! CTCATTCTTTTCTGAATTGC+AGG + chr4_3:54338256-54338275 Msa0647980:intron 35.0%
AACAGATTCCATTTACATGG+AGG + chr4_3:54338472-54338491 Msa0647980:CDS 35.0%
TTGAAGTTAACGTGATTGTC+TGG - chr4_3:54338565-54338584 None:intergenic 35.0%
AGACAATCACGTTAACTTCA+AGG + chr4_3:54338564-54338583 Msa0647980:CDS 35.0%
AAACAAACACATGTCAACAC+AGG - chr4_3:54338664-54338683 None:intergenic 35.0%
!! GTGTTGACATGTGTTTGTTT+TGG + chr4_3:54338664-54338683 Msa0647980:intron 35.0%
GGAAAAGGCTATTTAACGAA+TGG + chr4_3:54338765-54338784 Msa0647980:CDS 35.0%
TATCAGTGTTGCACCATAAA+CGG - chr4_3:54338835-54338854 None:intergenic 35.0%
! GTATATTAGCAATGCCACTT+TGG - chr4_3:54339036-54339055 None:intergenic 35.0%
!! AATACAACCCTCTAGAATGT+AGG - chr4_3:54339223-54339242 None:intergenic 35.0%
ATTGTATCGTATCGCCATTA+TGG + chr4_3:54339245-54339264 Msa0647980:three_prime_UTR 35.0%
CTGGTACAACATAACCATAA+TGG - chr4_3:54339262-54339281 None:intergenic 35.0%
!! ACAAACCTTAATTTGCAGCA+AGG - chr4_3:54339319-54339338 None:intergenic 35.0%
!!! TGTTTTAATATGTCCAGAGG+AGG - chr4_3:54339380-54339399 None:intergenic 35.0%
!!! CGATGTTTTAATATGTCCAG+AGG - chr4_3:54339383-54339402 None:intergenic 35.0%
! TCTTTATGATCTCGGTGTGT+CGG + chr4_3:54333107-54333126 Msa0647980:five_prime_UTR 40.0%
!! AAGGTAGGACCTGTTTTGTT+AGG + chr4_3:54333364-54333383 Msa0647980:intron 40.0%
!! AGGTAGGACCTGTTTTGTTA+GGG + chr4_3:54333365-54333384 Msa0647980:intron 40.0%
TTACTGGTCCCTAACAAAAC+AGG - chr4_3:54333376-54333395 None:intergenic 40.0%
! CAAATACATGAGTTCTGGTG+TGG + chr4_3:54333497-54333516 Msa0647980:intron 40.0%
GAAAAAATGGGAGCTATTGC+TGG + chr4_3:54334044-54334063 Msa0647980:exon 40.0%
TGGAGAAGAGTTGTCGAAAT+GGG + chr4_3:54334064-54334083 Msa0647980:CDS 40.0%
TCGAAATGGGAGAAGATGAA+TGG + chr4_3:54334077-54334096 Msa0647980:CDS 40.0%
GAGAAGATGAATGGAGTTAG+TGG + chr4_3:54334086-54334105 Msa0647980:CDS 40.0%
CTGCTAATGAATCTGCAGAT+TGG + chr4_3:54334168-54334187 Msa0647980:CDS 40.0%
AACCTTCACGCAATGTATTC+CGG - chr4_3:54334223-54334242 None:intergenic 40.0%
TTTCCAAGTGCCTACACATT+TGG + chr4_3:54334248-54334267 Msa0647980:CDS 40.0%
TTACCAAATGTGTAGGCACT+TGG - chr4_3:54334254-54334273 None:intergenic 40.0%
TGATACTTCTAAGTTCGGTC+GGG - chr4_3:54334398-54334417 None:intergenic 40.0%
AGTCTTAATCCTCAGTTCCA+GGG - chr4_3:54334431-54334450 None:intergenic 40.0%
! CTTTGGCAGACAGAGTATTT+CGG + chr4_3:54334835-54334854 Msa0647980:intron 40.0%
! TTTGGCAGACAGAGTATTTC+GGG + chr4_3:54334836-54334855 Msa0647980:intron 40.0%
GTGAAACAAGGCAGTATATG+AGG + chr4_3:54334865-54334884 Msa0647980:intron 40.0%
AACAAGGCAGTATATGAGGA+AGG + chr4_3:54334869-54334888 Msa0647980:intron 40.0%
GAAATCGCTCTTTCAGTAGT+CGG + chr4_3:54334899-54334918 Msa0647980:intron 40.0%
GCTTCAGTATCATTGTTCTC+TGG + chr4_3:54335163-54335182 Msa0647980:intron 40.0%
!! CGTTCTAGAGAAACTTACAG+AGG + chr4_3:54335470-54335489 Msa0647980:CDS 40.0%
ATAGCGCCGCTATTTAACAT+TGG - chr4_3:54335612-54335631 None:intergenic 40.0%
TCAGGGGATAAAATAGTCAG+GGG + chr4_3:54336057-54336076 Msa0647980:intron 40.0%
AGAAGTTACCACTAAAGCAC+AGG + chr4_3:54336517-54336536 Msa0647980:CDS 40.0%
AATTGCAAAAAGAGTTGGCC+AGG + chr4_3:54336576-54336595 Msa0647980:CDS 40.0%
! AGCTACATAATCAGTGTTGG+AGG - chr4_3:54336630-54336649 None:intergenic 40.0%
AACGTGATCTTGCTGAATCA+AGG + chr4_3:54336817-54336836 Msa0647980:CDS 40.0%
TCTTGCTGAATCAAGGATTG+AGG + chr4_3:54336824-54336843 Msa0647980:CDS 40.0%
GAACTCTCTAATGCGTATGT+TGG - chr4_3:54337071-54337090 None:intergenic 40.0%
!! GACAGTGGAAGTATTCAAGA+TGG + chr4_3:54337115-54337134 Msa0647980:CDS 40.0%
!! GATTTGGCTTTGACAGTATC+TGG + chr4_3:54337361-54337380 Msa0647980:CDS 40.0%
! GCCATTCAATGGGTTTGAAA+AGG + chr4_3:54337573-54337592 Msa0647980:CDS 40.0%
! ATAAACCATCTGGTCTTCCA+GGG - chr4_3:54337602-54337621 None:intergenic 40.0%
! AGCATCCATACTTTTGTTGC+TGG + chr4_3:54337759-54337778 Msa0647980:CDS 40.0%
! GCATCCATACTTTTGTTGCT+GGG + chr4_3:54337760-54337779 Msa0647980:CDS 40.0%
TCATCCCAGCAACAAAAGTA+TGG - chr4_3:54337767-54337786 None:intergenic 40.0%
TGTTGCTGGGATGAAAGAAA+TGG + chr4_3:54337773-54337792 Msa0647980:CDS 40.0%
GTTACGACAAGTCCTATATC+TGG - chr4_3:54338060-54338079 None:intergenic 40.0%
GACACAGATACGATACTACA+TGG - chr4_3:54338107-54338126 None:intergenic 40.0%
GCTAATATCTAGGAAACCCA+GGG - chr4_3:54338141-54338160 None:intergenic 40.0%
TGCTAATATCTAGGAAACCC+AGG - chr4_3:54338142-54338161 None:intergenic 40.0%
AGGAGACAGATAGAAAACTG+AGG + chr4_3:54338282-54338301 Msa0647980:CDS 40.0%
CTGAGGAATGTGAAAGATGT+AGG + chr4_3:54338299-54338318 Msa0647980:CDS 40.0%
AAGAAAGAAGTAGGTCCTGT+GGG - chr4_3:54338435-54338454 None:intergenic 40.0%
AAAGAAAGAAGTAGGTCCTG+TGG - chr4_3:54338436-54338455 None:intergenic 40.0%
AAGCTCTACCTCCATGTAAA+TGG - chr4_3:54338483-54338502 None:intergenic 40.0%
TTATGAAGCTTATGCGGAAG+AGG + chr4_3:54338726-54338745 Msa0647980:CDS 40.0%
! TTTCTGAGGAAGAGAGGAAA+AGG + chr4_3:54338750-54338769 Msa0647980:CDS 40.0%
CTATTTAACGAATGGGGCAT+TGG + chr4_3:54338773-54338792 Msa0647980:CDS 40.0%
TTGGATTGAATTCAAAGCGC+AGG + chr4_3:54338792-54338811 Msa0647980:CDS 40.0%
AAGTCCAAACATCTCCTTGA+GGG - chr4_3:54338924-54338943 None:intergenic 40.0%
TAAGTCCAAACATCTCCTTG+AGG - chr4_3:54338925-54338944 None:intergenic 40.0%
!!! TTTGTTTTGCGTCTCCAAAG+TGG + chr4_3:54339019-54339038 Msa0647980:three_prime_UTR 40.0%
CAATGGAGAGACACTTGTTT+CGG - chr4_3:54339175-54339194 None:intergenic 40.0%
AGACAGTCAAATTCGTCATC+TGG - chr4_3:54339281-54339300 None:intergenic 40.0%
TTCCTCCTTGCTGCAAATTA+AGG + chr4_3:54339311-54339330 Msa0647980:three_prime_UTR 40.0%
!! AACCTTAATTTGCAGCAAGG+AGG - chr4_3:54339316-54339335 None:intergenic 40.0%
TGAGGTGGAAAAAGAGGGTT+TGG + chr4_3:54334015-54334034 Msa0647980:five_prime_UTR 45.0%
CTGGAGAAGAGTTGTCGAAA+TGG + chr4_3:54334063-54334082 Msa0647980:CDS 45.0%
GCTTAGGCCTTTGAATGAGA+AGG + chr4_3:54334139-54334158 Msa0647980:CDS 45.0%
TACCGGAATACATTGCGTGA+AGG + chr4_3:54334218-54334237 Msa0647980:CDS 45.0%
GAGTCTTAATCCTCAGTTCC+AGG - chr4_3:54334432-54334451 None:intergenic 45.0%
! TTGGCAGACAGAGTATTTCG+GGG + chr4_3:54334837-54334856 Msa0647980:intron 45.0%
CGGGTCCTCTCTAACAAAAA+GGG - chr4_3:54335452-54335471 None:intergenic 45.0%
ACGGGTCCTCTCTAACAAAA+AGG - chr4_3:54335453-54335472 None:intergenic 45.0%
ACTTACAGAGGAGACTCTAC+AGG + chr4_3:54335482-54335501 Msa0647980:CDS 45.0%
AGAGGAGACTCTACAGGATT+GGG + chr4_3:54335488-54335507 Msa0647980:CDS 45.0%
! GAGCTCCTATCCTTTTGTGA+AGG + chr4_3:54335522-54335541 Msa0647980:CDS 45.0%
GTCTCTGAGCTGCAAGAATA+AGG - chr4_3:54335798-54335817 None:intergenic 45.0%
AGACCATTGAAAGTTCTGCC+AGG + chr4_3:54335957-54335976 Msa0647980:intron 45.0%
GACCATTGAAAGTTCTGCCA+GGG + chr4_3:54335958-54335977 Msa0647980:intron 45.0%
TTCCCTGGCAGAACTTTCAA+TGG - chr4_3:54335963-54335982 None:intergenic 45.0%
AAGTTCTGCCAGGGAATTTC+TGG + chr4_3:54335967-54335986 Msa0647980:CDS 45.0%
AGTTCTGCCAGGGAATTTCT+GGG + chr4_3:54335968-54335987 Msa0647980:CDS 45.0%
TACTACACTAGCTGATAGGG+TGG - chr4_3:54336008-54336027 None:intergenic 45.0%
CATCTCAGGTATCATCAGCT+GGG + chr4_3:54336166-54336185 Msa0647980:CDS 45.0%
ATCTCAGGTATCATCAGCTG+GGG + chr4_3:54336167-54336186 Msa0647980:CDS 45.0%
CAACCTCAGCTTACGAATGA+CGG - chr4_3:54336244-54336263 None:intergenic 45.0%
GAATGCAGTAAGGGAAGACA+TGG + chr4_3:54336344-54336363 Msa0647980:intron 45.0%
AGTGATGTCTGATAAGGCCT+TGG + chr4_3:54336547-54336566 Msa0647980:CDS 45.0%
!! TTTTAACTCGCCTTCCAACC+TGG - chr4_3:54336597-54336616 None:intergenic 45.0%
! TAATCAGTGTTGGAGGTAGC+AGG - chr4_3:54336623-54336642 None:intergenic 45.0%
AGAAGTTCGATGTGTCGAGT+TGG + chr4_3:54337282-54337301 Msa0647980:CDS 45.0%
GATCCGTCCTTAAGTGACAA+CGG + chr4_3:54337337-54337356 Msa0647980:CDS 45.0%
ATCCGTCCTTAAGTGACAAC+GGG + chr4_3:54337338-54337357 Msa0647980:CDS 45.0%
! CAAATCCCCGTTGTCACTTA+AGG - chr4_3:54337347-54337366 None:intergenic 45.0%
CTTAAGTGACAACGGGGATT+TGG + chr4_3:54337345-54337364 Msa0647980:CDS 45.0%
!! TTGGCTTTGACAGTATCTGG+AGG + chr4_3:54337364-54337383 Msa0647980:CDS 45.0%
!! TGGCTTTGACAGTATCTGGA+GGG + chr4_3:54337365-54337384 Msa0647980:CDS 45.0%
ACAGTATCTGGAGGGGAAAA+TGG + chr4_3:54337373-54337392 Msa0647980:CDS 45.0%
CAATCTCTACATGCCATGTC+AGG + chr4_3:54337445-54337464 Msa0647980:CDS 45.0%
AACTAGAAGCCGGAGTTGTT+CGG + chr4_3:54337498-54337517 Msa0647980:CDS 45.0%
TGGGTTTGAAAAGGATTCCC+TGG + chr4_3:54337582-54337601 Msa0647980:CDS 45.0%
! CATAAACCATCTGGTCTTCC+AGG - chr4_3:54337603-54337622 None:intergenic 45.0%
CTGGAAGACCAGATGGTTTA+TGG + chr4_3:54337601-54337620 Msa0647980:intron 45.0%
TTCTATTGGAAGTCCGTCAG+TGG + chr4_3:54337686-54337705 Msa0647980:CDS 45.0%
ATCTCAAGCTGTTGCCTCTA+AGG - chr4_3:54337716-54337735 None:intergenic 45.0%
! CTTGAGATCATCTGGTGATG+AGG + chr4_3:54337728-54337747 Msa0647980:CDS 45.0%
!! AAAGCAGCTTGTTGATGGTC+AGG + chr4_3:54337812-54337831 Msa0647980:CDS 45.0%
ATCGTATCTGTGTCCGTACT+AGG + chr4_3:54338113-54338132 Msa0647980:intron 45.0%
! CTTTTCTGAATTGCAGGGTC+AGG + chr4_3:54338262-54338281 Msa0647980:intron 45.0%
!! TGTAGGTGTTGATCCAATGC+AGG + chr4_3:54338316-54338335 Msa0647980:CDS 45.0%
AACTGCAGAGACCAGTCTAA+AGG - chr4_3:54338356-54338375 None:intergenic 45.0%
GCTATGTACCATTAACCCAC+AGG + chr4_3:54338417-54338436 Msa0647980:CDS 45.0%
! AAGTAGGTCCTGTGGGTTAA+TGG - chr4_3:54338428-54338447 None:intergenic 45.0%
! CTAGTGAGGTTTTCAGAGCA+GGG + chr4_3:54338893-54338912 Msa0647980:CDS 45.0%
TAACACGGCGAAGCTATTCA+TGG + chr4_3:54338960-54338979 Msa0647980:CDS 45.0%
! TCATTAGGAGTGTGTACAGC+AGG + chr4_3:54339060-54339079 Msa0647980:three_prime_UTR 45.0%
! CATTAGGAGTGTGTACAGCA+GGG + chr4_3:54339061-54339080 Msa0647980:three_prime_UTR 45.0%
CTTCTAAGTTCGGTCGGGTT+TGG - chr4_3:54334393-54334412 None:intergenic 50.0%
AGTATCAAACCCCTTCTCCC+TGG + chr4_3:54334411-54334430 Msa0647980:intron 50.0%
ATCCTCAGTTCCAGGGAGAA+GGG - chr4_3:54334424-54334443 None:intergenic 50.0%
AATCCTCAGTTCCAGGGAGA+AGG - chr4_3:54334425-54334444 None:intergenic 50.0%
TTCGGGGTGACTGTGAAACA+AGG + chr4_3:54334853-54334872 Msa0647980:intron 50.0%
ATCGCTCTTTCAGTAGTCGG+TGG + chr4_3:54334902-54334921 Msa0647980:intron 50.0%
GCATATGGGCAAACAAGCAG+TGG + chr4_3:54335028-54335047 Msa0647980:CDS 50.0%
! GCACTGACAACACTCCACTT+AGG + chr4_3:54335320-54335339 Msa0647980:CDS 50.0%
GGATCATCACGCAACCTAAG+TGG - chr4_3:54335337-54335356 None:intergenic 50.0%
TAGGTTGCGTGATGATCCTG+AGG + chr4_3:54335339-54335358 Msa0647980:CDS 50.0%
CAGAGGAGACTCTACAGGAT+TGG + chr4_3:54335487-54335506 Msa0647980:CDS 50.0%
GAGGAGACTCTACAGGATTG+GGG + chr4_3:54335489-54335508 Msa0647980:CDS 50.0%
AGGAGACTCTACAGGATTGG+GGG + chr4_3:54335490-54335509 Msa0647980:CDS 50.0%
CTTGCAGCTCAGAGACAAGT+AGG + chr4_3:54335802-54335821 Msa0647980:intron 50.0%
TCCTTTGCCCAGAAATTCCC+TGG - chr4_3:54335978-54335997 None:intergenic 50.0%
GCATCTCAGGTATCATCAGC+TGG + chr4_3:54336165-54336184 Msa0647980:CDS 50.0%
GCTGGGGTGAGATTGAAAGA+AGG + chr4_3:54336183-54336202 Msa0647980:CDS 50.0%
GAGGTTGTTCACTTCACCCT+CGG + chr4_3:54336257-54336276 Msa0647980:intron 50.0%
ATACTGCAGCCTTGCTTAGG+TGG + chr4_3:54336401-54336420 Msa0647980:CDS 50.0%
CTAGCATTGCCACCTAAGCA+AGG - chr4_3:54336413-54336432 None:intergenic 50.0%
TTTGCACTTTGAGCCCTGCA+CGG + chr4_3:54336444-54336463 Msa0647980:CDS 50.0%
GTTCAACATGACTCCGTGCA+GGG - chr4_3:54336460-54336479 None:intergenic 50.0%
TGTTCAACATGACTCCGTGC+AGG - chr4_3:54336461-54336480 None:intergenic 50.0%
GCAAAAAGAGTTGGCCAGGT+TGG + chr4_3:54336580-54336599 Msa0647980:CDS 50.0%
! AAAGAGTTGGCCAGGTTGGA+AGG + chr4_3:54336584-54336603 Msa0647980:CDS 50.0%
!! GATTGAGGATTTGCTGCGCA+TGG + chr4_3:54336839-54336858 Msa0647980:CDS 50.0%
TCCGTCCTTAAGTGACAACG+GGG + chr4_3:54337339-54337358 Msa0647980:CDS 50.0%
! TCCCCGTTGTCACTTAAGGA+CGG - chr4_3:54337343-54337362 None:intergenic 50.0%
! GGCTTTGACAGTATCTGGAG+GGG + chr4_3:54337366-54337385 Msa0647980:CDS 50.0%
AGGGGAAAATGGAACAAGCC+AGG + chr4_3:54337384-54337403 Msa0647980:CDS 50.0%
TGTGATGCTCCGAACAACTC+CGG - chr4_3:54337510-54337529 None:intergenic 50.0%
TTCTCCTGTCTCGAAGCAGT+GGG - chr4_3:54337542-54337561 None:intergenic 50.0%
TTTCTCCTGTCTCGAAGCAG+TGG - chr4_3:54337543-54337562 None:intergenic 50.0%
CTGCTTCGAGACAGGAGAAA+TGG + chr4_3:54337543-54337562 Msa0647980:CDS 50.0%
TCGAGACAGGAGAAATGGAG+AGG + chr4_3:54337548-54337567 Msa0647980:CDS 50.0%
ATGGAGAGGACGCCATTCAA+TGG + chr4_3:54337562-54337581 Msa0647980:CDS 50.0%
TGGAGAGGACGCCATTCAAT+GGG + chr4_3:54337563-54337582 Msa0647980:CDS 50.0%
!! CCTCTAAGGTCATCCACTGA+CGG - chr4_3:54337702-54337721 None:intergenic 50.0%
GGCAACAGCTTGAGATCATC+TGG + chr4_3:54337720-54337739 Msa0647980:CDS 50.0%
! GAAACCCAGGGTACCTAGTA+CGG - chr4_3:54338129-54338148 None:intergenic 50.0%
!! AGGTGTTGATCCAATGCAGG+AGG + chr4_3:54338319-54338338 Msa0647980:CDS 50.0%
CACCAGGAACTCCTTTAGAC+TGG + chr4_3:54338342-54338361 Msa0647980:CDS 50.0%
GACCAGTCTAAAGGAGTTCC+TGG - chr4_3:54338347-54338366 None:intergenic 50.0%
! ACTGGTCTCTGCAGTTCAAG+AGG + chr4_3:54338360-54338379 Msa0647980:CDS 50.0%
TCTGGCTGTCTTTCTCAGAC+TGG - chr4_3:54338547-54338566 None:intergenic 50.0%
GACACAGTGTGAGAGCTCTT+CGG + chr4_3:54338687-54338706 Msa0647980:intron 50.0%
TATGCGGAAGAGGCTTTCTG+AGG + chr4_3:54338736-54338755 Msa0647980:CDS 50.0%
! AGAGGCTTTCTGAGGAAGAG+AGG + chr4_3:54338744-54338763 Msa0647980:CDS 50.0%
TGCAGCTAGCAGACCGTTTA+TGG + chr4_3:54338819-54338838 Msa0647980:CDS 50.0%
TTGCAGCACTCTGCATTACG+TGG - chr4_3:54338862-54338881 None:intergenic 50.0%
!! AGAGTGCTGCAATAGTTGCG+AGG + chr4_3:54338870-54338889 Msa0647980:CDS 50.0%
CAATAGTTGCGAGGCTAGTG+AGG + chr4_3:54338879-54338898 Msa0647980:CDS 50.0%
! GCTAGTGAGGTTTTCAGAGC+AGG + chr4_3:54338892-54338911 Msa0647980:CDS 50.0%
GCTTCACACCTCAGCTAACA+CGG + chr4_3:54338945-54338964 Msa0647980:CDS 50.0%
CCTGTCTGTGTCTGGTGTCT+GGG - chr4_3:54333275-54333294 None:intergenic 55.0%
TCCTGTCTGTGTCTGGTGTC+TGG - chr4_3:54333276-54333295 None:intergenic 55.0%
GTCAGTGTCCTGTCTGTGTC+TGG - chr4_3:54333283-54333302 None:intergenic 55.0%
TCCTCAGTTCCAGGGAGAAG+GGG - chr4_3:54334423-54334442 None:intergenic 55.0%
GCGCTATAGCGCTGCAGAAT+TGG + chr4_3:54335625-54335644 Msa0647980:intron 55.0%
! GCCAGGGAATTTCTGGGCAA+AGG + chr4_3:54335974-54335993 Msa0647980:CDS 55.0%
CGACCGTCATTCGTAAGCTG+AGG + chr4_3:54336238-54336257 Msa0647980:CDS 55.0%
CGCATACTGCAGCCTTGCTT+AGG + chr4_3:54336398-54336417 Msa0647980:CDS 55.0%
!! TGAGGATTTGCTGCGCATGG+TGG + chr4_3:54336842-54336861 Msa0647980:CDS 55.0%
!! GAGGATTTGCTGCGCATGGT+GGG + chr4_3:54336843-54336862 Msa0647980:CDS 55.0%
!! AGGATTTGCTGCGCATGGTG+GGG + chr4_3:54336844-54336863 Msa0647980:CDS 55.0%
GGATTCCCTGGAAGACCAGA+TGG + chr4_3:54337594-54337613 Msa0647980:CDS 55.0%
CCGTCAGTGGATGACCTTAG+AGG + chr4_3:54337699-54337718 Msa0647980:CDS 55.0%
TGTGTCCGTACTAGGTACCC+TGG + chr4_3:54338121-54338140 Msa0647980:intron 55.0%
GTGTCCGTACTAGGTACCCT+GGG + chr4_3:54338122-54338141 Msa0647980:intron 55.0%
ACAGTGTGAGAGCTCTTCGG+CGG + chr4_3:54338690-54338709 Msa0647980:intron 55.0%
CGAGCCCTCAAGGAGATGTT+TGG + chr4_3:54338917-54338936 Msa0647980:CDS 55.0%
TAGCTTCGCCGTGTTAGCTG+AGG - chr4_3:54338956-54338975 None:intergenic 55.0%
CCCAGACACCAGACACAGAC+AGG + chr4_3:54333272-54333291 Msa0647980:five_prime_UTR 60.0%
ACCCCTTCTCCCTGGAACTG+AGG + chr4_3:54334419-54334438 Msa0647980:intron 60.0%
GCTTCCCACTGCTTCGAGAC+AGG + chr4_3:54337535-54337554 Msa0647980:CDS 60.0%
!! GATCCAATGCAGGAGGCACC+AGG + chr4_3:54338326-54338345 Msa0647980:CDS 60.0%
GTTCCTGGTGCCTCCTGCAT+TGG - chr4_3:54338332-54338351 None:intergenic 60.0%
CAGTGTGAGAGCTCTTCGGC+GGG + chr4_3:54338691-54338710 Msa0647980:intron 60.0%
AGGGAGCGAGCGTGCATCTC+AGG + chr4_3:54336152-54336171 Msa0647980:CDS 65.0%
AGAGCAGGGACGAGCCCTCA+AGG + chr4_3:54338907-54338926 Msa0647980:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 54333052 54339437 54333052 ID=Msa0647980;Name=Msa0647980
chr4_3 mRNA 54333052 54339437 54333052 ID=Msa0647980-mRNA-1;Parent=Msa0647980;Name=Msa0647980-mRNA-1;_AED=0.18;_eAED=0.18;_QI=390|0.85|0.86|1|0.92|0.86|15|428|822
chr4_3 exon 54333052 54333366 54333052 ID=Msa0647980-mRNA-1:exon:13697;Parent=Msa0647980-mRNA-1
chr4_3 exon 54333975 54334269 54333975 ID=Msa0647980-mRNA-1:exon:13698;Parent=Msa0647980-mRNA-1
chr4_3 exon 54335017 54335117 54335017 ID=Msa0647980-mRNA-1:exon:13699;Parent=Msa0647980-mRNA-1
chr4_3 exon 54335247 54335360 54335247 ID=Msa0647980-mRNA-1:exon:13700;Parent=Msa0647980-mRNA-1
chr4_3 exon 54335462 54335543 54335462 ID=Msa0647980-mRNA-1:exon:13701;Parent=Msa0647980-mRNA-1
chr4_3 exon 54335809 54335876 54335809 ID=Msa0647980-mRNA-1:exon:13702;Parent=Msa0647980-mRNA-1
chr4_3 exon 54335959 54336024 54335959 ID=Msa0647980-mRNA-1:exon:13703;Parent=Msa0647980-mRNA-1
chr4_3 exon 54336135 54336259 54336135 ID=Msa0647980-mRNA-1:exon:13704;Parent=Msa0647980-mRNA-1
chr4_3 exon 54336352 54336682 54336352 ID=Msa0647980-mRNA-1:exon:13705;Parent=Msa0647980-mRNA-1
chr4_3 exon 54336786 54336887 54336786 ID=Msa0647980-mRNA-1:exon:13706;Parent=Msa0647980-mRNA-1
chr4_3 exon 54337010 54337136 54337010 ID=Msa0647980-mRNA-1:exon:13707;Parent=Msa0647980-mRNA-1
chr4_3 exon 54337257 54337615 54337257 ID=Msa0647980-mRNA-1:exon:13708;Parent=Msa0647980-mRNA-1
chr4_3 exon 54337684 54337833 54337684 ID=Msa0647980-mRNA-1:exon:13709;Parent=Msa0647980-mRNA-1
chr4_3 exon 54338278 54338585 54338278 ID=Msa0647980-mRNA-1:exon:13710;Parent=Msa0647980-mRNA-1
chr4_3 exon 54338694 54339437 54338694 ID=Msa0647980-mRNA-1:exon:13711;Parent=Msa0647980-mRNA-1
chr4_3 five_prime_UTR 54333052 54333366 54333052 ID=Msa0647980-mRNA-1:five_prime_utr;Parent=Msa0647980-mRNA-1
chr4_3 five_prime_UTR 54333975 54334049 54333975 ID=Msa0647980-mRNA-1:five_prime_utr;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54334050 54334269 54334050 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54335017 54335117 54335017 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54335247 54335360 54335247 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54335462 54335543 54335462 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54335809 54335876 54335809 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54335959 54336024 54335959 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54336135 54336259 54336135 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54336352 54336682 54336352 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54336786 54336887 54336786 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54337010 54337136 54337010 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54337257 54337615 54337257 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54337684 54337833 54337684 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54338278 54338585 54338278 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 CDS 54338694 54339009 54338694 ID=Msa0647980-mRNA-1:cds;Parent=Msa0647980-mRNA-1
chr4_3 three_prime_UTR 54339010 54339437 54339010 ID=Msa0647980-mRNA-1:three_prime_utr;Parent=Msa0647980-mRNA-1
Gene Sequence

>Msa0647980

ATGGGAGCTATTGCTGGAGAAGAGTTGTCGAAATGGGAGAAGATGAATGGAGTTAGTGGTTGTGAAGAGAAGATTCTTGTGTTACTTAGGCTTAGGCCTTTGAATGAGAAGGAAATTTCTGCTAATGAATCTGCAGATTGGGAATGTATTAATGATACTACAATTTTGTACCGGAATACATTGCGTGAAGGTTCTACGTTTCCAAGTGCCTACACATTTGCAAGTATTTTTGCATATGGGCAAACAAGCAGTGGAAAGACATATACTATGGTTGGAATAACTGAATTTGCTGTAGCAGATATTTTTGACTATGCAAAAAGGCATGAAGAAAGAGCATTTGCATTGAAGTTCTCAGCAATTGAGATTTACAATGAAATTGTTAGAGATCTTCTCAGCACTGACAACACTCCACTTAGGTTGCGTGATGATCCTGAGAGAGGACCCGTTCTAGAGAAACTTACAGAGGAGACTCTACAGGATTGGGGGCATTTTCAAGAGCTCCTATCCTTTTGTGAAGCTCAGAGACAAGTAGGAGAGACATACCTGAATGAAAAGAGTTCAAGATCTCACCAAATTATCAGATTGACCATTGAAAGTTCTGCCAGGGAATTTCTGGGCAAAGGAAACTCAACCACCCTATCAGCTAGTGTAAATTTTGTTGATTTGGCAGGGAGCGAGCGTGCATCTCAGGTATCATCAGCTGGGGTGAGATTGAAAGAAGGTTGCCATATAAACCGGAGTTTACTTACTCTTTCGACCGTCATTCGTAAGCTGAGTAAGGGAAGACATGGACACATCAATTACAGAGATTCTAAGTTGACACGCATACTGCAGCCTTGCTTAGGTGGCAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCTGCACGGAGTCATGTTGAACAAACTAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTTACCACTAAAGCACAGGTTAATGTAGTGATGTCTGATAAGGCCTTGGTCAAGCAATTGCAAAAAGAGTTGGCCAGGTTGGAAGGCGAGTTAAAAACTCCTGCTACCTCCAACACTGATTATGTAGCTTTGTTGAGAAAGAAAGATCAACAGATAGAAAAGATGGATAAGGAAATTAAGGAGCTAACTAAGCAACGTGATCTTGCTGAATCAAGGATTGAGGATTTGCTGCGCATGGTGGGGAAAGATCAGATATCTAAAAAGGAAGAAGATTTATGGGAAGATGACTGTTCAGTATCAGAGTCCTCAAGCATTTGTGGTCCCAACATACGCATTAGAGAGTTCAACAATCCTCAATATAATAGTGGAGACAGTGGAAGTATTCAAGATGAAGAAGACCTTGATGAATACTGCAAAGAAGTTCGATGTGTCGAGTTGGAAGAGTCAAGTAGAGACAACTCAGAATTACTTGATCCGTCCTTAAGTGACAACGGGGATTTGGCTTTGACAGTATCTGGAGGGGAAAATGGAACAAGCCAGGAAATGTCTACACATTTGAATGAAGACAGCCATGATGAACAATCTCTACATGCCATGTCAGGAAACATGTCAAATTATAGAAATCACAAATTAACTAGAAGCCGGAGTTGTTCGGAGCATCACATGACTGCTTCCCACTGCTTCGAGACAGGAGAAATGGAGAGGACGCCATTCAATGGGTTTGAAAAGGATTCCCTGGAAGACCAGATGTCTTCTATTGGAAGTCCGTCAGTGGATGACCTTAGAGGCAACAGCTTGAGATCATCTGGTGATGAGGACATTACTAGCATCCATACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACTTGAATATGAAAAGCAGCTTGTTGATGGTCAGGGTCAGGAGACAGATAGAAAACTGAGGAATGTGAAAGATGTAGGTGTTGATCCAATGCAGGAGGCACCAGGAACTCCTTTAGACTGGTCTCTGCAGTTCAAGAGGCAGCAAAAAGAGATAATTGAACTGTGGCAATCTTGCTATGTACCATTAACCCACAGGACCTACTTCTTTCTTTTGTTTAGGGGTGAACAAACAGATTCCATTTACATGGAGGTAGAGCTTAGAAGACTATGCTTCCTGAAAGAAACATTTTTTGATGAAAACCAGTCTGAGAAAGACAGCCAGACAATCACGTTAACTTCAAGTGTGAGAGCTCTTCGGCGGGAGAAAGAAATGCTTATGAAGCTTATGCGGAAGAGGCTTTCTGAGGAAGAGAGGAAAAGGCTATTTAACGAATGGGGCATTGGATTGAATTCAAAGCGCAGGAGAATGCAGCTAGCAGACCGTTTATGGTGCAACACTGATATGAACCACGTAATGCAGAGTGCTGCAATAGTTGCGAGGCTAGTGAGGTTTTCAGAGCAGGGACGAGCCCTCAAGGAGATGTTTGGACTTAGCTTCACACCTCAGCTAACACGGCGAAGCTATTCATGGAAAAGTTCAAGAGCATCTCTTCCTTAG
Protein sequence

>Msa0647980

MGAIAGEELSKWEKMNGVSGCEEKILVLLRLRPLNEKEISANESADWECINDTTILYRNTLREGSTFPSAYTFASIFAYGQTSSGKTYTMVGITEFAVADIFDYAKRHEERAFALKFSAIEIYNEIVRDLLSTDNTPLRLRDDPERGPVLEKLTEETLQDWGHFQELLSFCEAQRQVGETYLNEKSSRSHQIIRLTIESSAREFLGKGNSTTLSASVNFVDLAGSERASQVSSAGVRLKEGCHINRSLLTLSTVIRKLSKGRHGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKELARLEGELKTPATSNTDYVALLRKKDQQIEKMDKEIKELTKQRDLAESRIEDLLRMVGKDQISKKEEDLWEDDCSVSESSSICGPNIRIREFNNPQYNSGDSGSIQDEEDLDEYCKEVRCVELEESSRDNSELLDPSLSDNGDLALTVSGGENGTSQEMSTHLNEDSHDEQSLHAMSGNMSNYRNHKLTRSRSCSEHHMTASHCFETGEMERTPFNGFEKDSLEDQMSSIGSPSVDDLRGNSLRSSGDEDITSIHTFVAGMKEMVKLEYEKQLVDGQGQETDRKLRNVKDVGVDPMQEAPGTPLDWSLQFKRQQKEIIELWQSCYVPLTHRTYFFLLFRGEQTDSIYMEVELRRLCFLKETFFDENQSEKDSQTITLTSSVRALRREKEMLMKLMRKRLSEEERKRLFNEWGIGLNSKRRRMQLADRLWCNTDMNHVMQSAAIVARLVRFSEQGRALKEMFGLSFTPQLTRRSYSWKSSRASLP*