Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0620930 | XP_024638849.1 | 95.000 | 80 | 3 | 1 | 1 | 79 | 164 | 243 | 1.12e-41 | 152 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011660 | Msa0620930 | -0.811954 | 5.405991e-51 | -8.615850e-47 |
| Msa0090360 | Msa0620930 | 0.819796 | 9.623759e-53 | -8.615850e-47 |
| Msa0090570 | Msa0620930 | 0.841366 | 4.962654e-58 | -8.615850e-47 |
| Msa0620930 | Msa0653670 | 0.803824 | 2.898307e-49 | -8.615850e-47 |
| Msa0620930 | Msa0663390 | 0.802428 | 5.637494e-49 | -8.615850e-47 |
| Msa0620930 | Msa0682680 | 0.809103 | 2.232642e-50 | -8.615850e-47 |
| Msa0620930 | Msa0698540 | 0.818388 | 2.012394e-52 | -8.615850e-47 |
| Msa0620930 | Msa0707250 | 0.809291 | 2.034279e-50 | -8.615850e-47 |
| Msa0620930 | Msa0762970 | 0.809015 | 2.331126e-50 | -8.615850e-47 |
| Msa0620930 | Msa0826150 | 0.801551 | 8.535803e-49 | -8.615850e-47 |
| Msa0620930 | Msa0844450 | 0.804470 | 2.127224e-49 | -8.615850e-47 |
| Msa0620930 | Msa0890550 | 0.809714 | 1.650996e-50 | -8.615850e-47 |
| Msa0620930 | Msa0892640 | 0.808360 | 3.218387e-50 | -8.615850e-47 |
| Msa0620930 | Msa0969810 | 0.817071 | 3.987893e-52 | -8.615850e-47 |
| Msa0620930 | Msa1078170 | 0.805025 | 1.628718e-49 | -8.615850e-47 |
| Msa0620930 | Msa1089450 | 0.813318 | 2.719437e-51 | -8.615850e-47 |
| Msa0620930 | Msa1162780 | 0.811445 | 6.974913e-51 | -8.615850e-47 |
| Msa0620930 | Msa1169550 | 0.802470 | 5.526342e-49 | -8.615850e-47 |
| Msa0620930 | Msa1232740 | 0.813075 | 3.074437e-51 | -8.615850e-47 |
| Msa0620930 | Msa1275590 | 0.805642 | 1.209491e-49 | -8.615850e-47 |
| Msa0620930 | Msa1298510 | 0.801691 | 7.990466e-49 | -8.615850e-47 |
| Msa0620930 | Msa1305810 | 0.809728 | 1.639696e-50 | -8.615850e-47 |
| Msa0620930 | Msa1313320 | 0.809903 | 1.503309e-50 | -8.615850e-47 |
| Msa0620930 | Msa1385460 | 0.810867 | 9.308575e-51 | -8.615850e-47 |
| Msa0620930 | Msa1390700 | 0.811311 | 7.458186e-51 | -8.615850e-47 |
| Msa0620930 | Msa1392910 | 0.809788 | 1.591349e-50 | -8.615850e-47 |
| Msa0620930 | Msa1433390 | 0.816524 | 5.291328e-52 | -8.615850e-47 |
| Msa0620930 | Msa1437560 | 0.804817 | 1.800836e-49 | -8.615850e-47 |
| Msa0620930 | Msa1451160 | 0.809046 | 2.295808e-50 | -8.615850e-47 |
| Msa0620930 | Msa1458750 | 0.802577 | 5.250816e-49 | -8.615850e-47 |
| Msa0620930 | Msa1466540 | 0.800627 | 1.318896e-48 | -8.615850e-47 |
| Msa0127800 | Msa0620930 | 0.816745 | 4.720312e-52 | -8.615850e-47 |
| Msa0137840 | Msa0620930 | 0.801928 | 7.144298e-49 | -8.615850e-47 |
| Msa0173400 | Msa0620930 | 0.853052 | 3.083712e-61 | -8.615850e-47 |
| Msa0183850 | Msa0620930 | 0.829772 | 4.269912e-55 | -8.615850e-47 |
| Msa0184040 | Msa0620930 | 0.818779 | 1.640114e-52 | -8.615850e-47 |
| Msa0204960 | Msa0620930 | 0.807477 | 4.959485e-50 | -8.615850e-47 |
| Msa0206830 | Msa0620930 | 0.819922 | 9.002226e-53 | -8.615850e-47 |
| Msa0209500 | Msa0620930 | 0.815953 | 7.097721e-52 | -8.615850e-47 |
| Msa0231980 | Msa0620930 | 0.803235 | 3.840249e-49 | -8.615850e-47 |
| Msa0367870 | Msa0620930 | 0.804644 | 1.956657e-49 | -8.615850e-47 |
| Msa0395820 | Msa0620930 | 0.802507 | 5.429853e-49 | -8.615850e-47 |
| Msa0426760 | Msa0620930 | 0.802376 | 5.776946e-49 | -8.615850e-47 |
| Msa0240900 | Msa0620930 | 0.814192 | 1.745762e-51 | -8.615850e-47 |
| Msa0267370 | Msa0620930 | 0.804740 | 1.868372e-49 | -8.615850e-47 |
| Msa0317970 | Msa0620930 | 0.825051 | 5.785921e-54 | -8.615850e-47 |
| Msa0326480 | Msa0620930 | 0.818312 | 2.093282e-52 | -8.615850e-47 |
| Msa0336320 | Msa0620930 | 0.824541 | 7.631495e-54 | -8.615850e-47 |
| Msa0357900 | Msa0620930 | 0.800778 | 1.228654e-48 | -8.615850e-47 |
| Msa0363790 | Msa0620930 | 0.802663 | 5.041121e-49 | -8.615850e-47 |
| Msa0529890 | Msa0620930 | 0.800819 | 1.204885e-48 | -8.615850e-47 |
| Msa0547160 | Msa0620930 | 0.802600 | 5.194183e-49 | -8.615850e-47 |
| Msa0556060 | Msa0620930 | 0.811136 | 8.142739e-51 | -8.615850e-47 |
| Msa0585560 | Msa0620930 | 0.809896 | 1.508209e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0620930 | MtrunA17_Chr1g0193161 | 95.000 | 80 | 3 | 1 | 1 | 79 | 164 | 243 | 1.03e-45 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 60 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAAGCTTCGGGGTTCAAT+TGG | 0.292379 | 4_2:-72736629 | Msa0620930:CDS |
| CTGTGATTGGGAACAAAATT+GGG | 0.320656 | 4_2:-72736496 | Msa0620930:CDS |
| CCTGTGATTGGGAACAAAAT+TGG | 0.324060 | 4_2:-72736497 | Msa0620930:CDS |
| TGTTTGCGCTTCAAAAGCTT+CGG | 0.339007 | 4_2:-72736640 | Msa0620930:CDS |
| AGAGTTGGGGCTAATGGAAT+TGG | 0.345307 | 4_2:-72736524 | Msa0620930:CDS |
| GTTTGCGCTTCAAAAGCTTC+GGG | 0.352957 | 4_2:-72736639 | Msa0620930:CDS |
| ATTAGCAGAGTTGGGGCTAA+TGG | 0.370384 | 4_2:-72736530 | Msa0620930:CDS |
| GTCCTCTCATTAGCAGAGTT+GGG | 0.371078 | 4_2:-72736538 | Msa0620930:CDS |
| GGCTTGGGTGTTTCTAGAGT+TGG | 0.405267 | 4_2:-72735376 | Msa0620930:CDS |
| ACCAGACCGAAGCAGCGTTT+TGG | 0.407987 | 4_2:+72732541 | Msa0620920:CDS |
| GATGGAAGAATAGGGAATAA+TGG | 0.411591 | 4_2:-72736461 | Msa0620930:intron |
| TTCGAGCCAAAACGCTGCTT+CGG | 0.430499 | 4_2:-72732547 | Msa0620930:CDS |
| CCTCTACAGCATAAGATTTG+TGG | 0.431698 | 4_2:-72732721 | Msa0620930:CDS |
| ACGGAAGTGATGGAAGAATA+GGG | 0.436833 | 4_2:-72736469 | Msa0620930:CDS |
| AGGACAGTGATTGCACCAAA+TGG | 0.442764 | 4_2:-72732815 | Msa0620930:CDS |
| GCCAAAACGCTGCTTCGGTC+TGG | 0.449009 | 4_2:-72732542 | Msa0620930:CDS |
| AAAAGCTTCGGGGTTCAATT+GGG | 0.459770 | 4_2:-72736628 | Msa0620930:CDS |
| GGTCCTCTCATTAGCAGAGT+TGG | 0.474212 | 4_2:-72736539 | Msa0620930:CDS |
| AACGGAAGTGATGGAAGAAT+AGG | 0.475585 | 4_2:-72736470 | Msa0620930:CDS |
| GGACAGTGATTGCACCAAAT+GGG | 0.480036 | 4_2:-72732814 | Msa0620930:CDS |
| GCTGTTGAAGAAGCATATAA+AGG | 0.489901 | 4_2:+72732770 | Msa0620920:CDS |
| TCAAGGAATTGCATGTAGAC+GGG | 0.490134 | 4_2:+72732681 | Msa0620920:CDS |
| AATGCAGATAGACAAGGGCT+TGG | 0.492773 | 4_2:-72735392 | Msa0620930:intron |
| TTCTAGAGTTGGTGCTGCTG+TGG | 0.498105 | 4_2:-72735365 | Msa0620930:CDS |
| TGTGGTGATAGACGCCCATT+TGG | 0.505051 | 4_2:+72732800 | Msa0620920:CDS |
| CTGCTAATGAGAGGACCATT+CGG | 0.507849 | 4_2:+72736545 | None:intergenic |
| GAGTTGGGGCTAATGGAATT+GGG | 0.512289 | 4_2:-72736523 | Msa0620930:CDS |
| GGTTCAATTGGGTTGAGTAA+TGG | 0.514286 | 4_2:-72736617 | Msa0620930:CDS |
| CAGCCGTCGCATTGGACTCA+AGG | 0.517614 | 4_2:+72732664 | Msa0620920:CDS |
| CTCAAGGAATTGCATGTAGA+CGG | 0.517839 | 4_2:+72732680 | Msa0620920:CDS |
| TCGATGTGGCAGATTGGACA+TGG | 0.518356 | 4_2:-72732618 | Msa0620930:CDS |
| CCACAAATCTTATGCTGTAG+AGG | 0.520720 | 4_2:+72732721 | Msa0620920:CDS |
| GGAATTGGGAGTCCTGTGAT+TGG | 0.527033 | 4_2:-72736509 | Msa0620930:CDS |
| AAAACGCTGCTTCGGTCTGG+TGG | 0.542924 | 4_2:-72732539 | Msa0620930:CDS |
| ATGCAGATAGACAAGGGCTT+GGG | 0.542987 | 4_2:-72735391 | Msa0620930:intron |
| CCGCATCACAGCCGTCGCAT+TGG | 0.547325 | 4_2:+72732656 | Msa0620920:CDS |
| GAATTGGGAGTCCTGTGATT+GGG | 0.553852 | 4_2:-72736508 | Msa0620930:CDS |
| GATGGCGAGGAAGAGAACTA+AGG | 0.577312 | 4_2:-72736678 | Msa0620930:CDS |
| CCAATGCGACGGCTGTGATG+CGG | 0.580893 | 4_2:-72732656 | Msa0620930:CDS |
| TTTGCGCTTCAAAAGCTTCG+GGG | 0.596596 | 4_2:-72736638 | Msa0620930:CDS |
| TCCTCTCATTAGCAGAGTTG+GGG | 0.601729 | 4_2:-72736537 | Msa0620930:CDS |
| TTAAGGAAGCTGCGATGGCG+AGG | 0.601952 | 4_2:-72736691 | None:intergenic |
| AATGCAGATAGACAAGGGCA+TGG | 0.605215 | 4_2:-72735430 | Msa0620930:intron |
| GGACATTCGCAGTCGCCGAA+TGG | 0.607627 | 4_2:-72736560 | Msa0620930:CDS |
| GAGTAATGGTAACAATGTTG+TGG | 0.607974 | 4_2:-72736603 | Msa0620930:CDS |
| TGTGATTGGGAACAAAATTG+GGG | 0.609875 | 4_2:-72736495 | Msa0620930:CDS |
| ATGCAGATAGACAAGGGCAT+GGG | 0.611416 | 4_2:-72735429 | Msa0620930:intron |
| ATGCGACGGCTGTGATGCGG+CGG | 0.611691 | 4_2:-72732653 | Msa0620930:CDS |
| GTGGCAGATTGGACATGGGT+CGG | 0.629943 | 4_2:-72732613 | Msa0620930:CDS |
| GTTTGAATGCAGATAGACAA+GGG | 0.634045 | 4_2:-72735397 | Msa0620930:intron |
| ATTCCTTGAGTCCAATGCGA+CGG | 0.635670 | 4_2:-72732667 | Msa0620930:CDS |
| GCATATAAAGGTGTTGAATG+TGG | 0.638640 | 4_2:+72732782 | Msa0620920:CDS |
| GCCCCAACTCTGCTAATGAG+AGG | 0.639500 | 4_2:+72736536 | None:intergenic |
| CAAGGAATTGCATGTAGACG+GGG | 0.642322 | 4_2:+72732682 | Msa0620920:CDS |
| TGGTGGTCGATGTGGCAGAT+TGG | 0.644687 | 4_2:-72732624 | Msa0620930:CDS |
| GTTTGAATGCAGATAGACAA+GGG | 0.661809 | 4_2:-72735435 | Msa0620930:intron |
| GGTTTGAATGCAGATAGACA+AGG | 0.679012 | 4_2:-72735398 | Msa0620930:intron |
| GGTTTGAATGCAGATAGACA+AGG | 0.681495 | 4_2:-72735436 | Msa0620930:intron |
| CGATGTGGCAGATTGGACAT+GGG | 0.709299 | 4_2:-72732617 | Msa0620930:CDS |
| GTGATTGGGAACAAAATTGG+GGG | 0.716183 | 4_2:-72736494 | Msa0620930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTAGTTTTAGTTTA+AGG | - | chr4_2:72732843-72732862 | Msa0620930:intron | 10.0% |
| !!! | TTTTTTTTCAAAAATTGTAA+AGG | - | chr4_2:72733566-72733585 | Msa0620930:intron | 10.0% |
| !!! | TTTTAGTTATCAATTTTTAT+TGG | - | chr4_2:72734123-72734142 | Msa0620930:intron | 10.0% |
| !!! | TATTACGTTTTATTTTATTT+TGG | + | chr4_2:72734950-72734969 | None:intergenic | 10.0% |
| !!! | AAGATATTTTAAAAAAGAGA+TGG | - | chr4_2:72733343-72733362 | Msa0620930:intron | 15.0% |
| !! | CTTAAACTAAAAAACATAAA+AGG | + | chr4_2:72733623-72733642 | None:intergenic | 15.0% |
| !!! | TTAACATATTTTCTTTTAGT+AGG | - | chr4_2:72734289-72734308 | Msa0620930:intron | 15.0% |
| !! | ATTGAAATATATTAACACTA+AGG | - | chr4_2:72735773-72735792 | Msa0620930:intron | 15.0% |
| !! | GAAAATATTATTCAATTTGT+AGG | + | chr4_2:72736037-72736056 | None:intergenic | 15.0% |
| !!! | CTTAAGTTTTGAAATATTAA+TGG | - | chr4_2:72736178-72736197 | Msa0620930:intron | 15.0% |
| !! | TTAAATTGTTAACAAAGAGA+TGG | - | chr4_2:72732924-72732943 | Msa0620930:intron | 20.0% |
| !!! | TTTCAAAAATCCAATTTTTC+CGG | + | chr4_2:72733104-72733123 | Msa0620920:CDS | 20.0% |
| !!! | TGATAGGTTTTTTTCAAAAA+AGG | - | chr4_2:72733231-72733250 | Msa0620930:intron | 20.0% |
| !!! | TATTTTAAAAAAGAGATGGT+AGG | - | chr4_2:72733347-72733366 | Msa0620930:intron | 20.0% |
| !!! | TTTTGAAAATCCATTTTTTC+CGG | + | chr4_2:72733415-72733434 | None:intergenic | 20.0% |
| !!! | CTTTTCAAAAAAGATATGAT+AGG | - | chr4_2:72733460-72733479 | Msa0620930:intron | 20.0% |
| !! | TAAAATTGCATAATCACATT+AGG | + | chr4_2:72733937-72733956 | None:intergenic | 20.0% |
| !!! | AGTTATCAATTTTTATTGGT+TGG | - | chr4_2:72734127-72734146 | Msa0620930:intron | 20.0% |
| !!! | AAATGTTTGTTTTTCTTACT+AGG | - | chr4_2:72734414-72734433 | Msa0620930:intron | 20.0% |
| !! | TCTAGAAAATTACTAAGATT+TGG | - | chr4_2:72734982-72735001 | Msa0620930:intron | 20.0% |
| !! | ACATAGAAAAATGATTGAAT+GGG | + | chr4_2:72735532-72735551 | None:intergenic | 20.0% |
| !! | TACATAGAAAAATGATTGAA+TGG | + | chr4_2:72735533-72735552 | None:intergenic | 20.0% |
| !!! | ACTTTTAAAATGATGTTAGT+GGG | + | chr4_2:72735561-72735580 | None:intergenic | 20.0% |
| !!! | TACTTTTAAAATGATGTTAG+TGG | + | chr4_2:72735562-72735581 | None:intergenic | 20.0% |
| !! | AACAAATTCTCCAAAAAATA+TGG | - | chr4_2:72735883-72735902 | Msa0620930:intron | 20.0% |
| !! | AAGATTACTTTAATGAATTG+TGG | + | chr4_2:72735944-72735963 | None:intergenic | 20.0% |
| !! | TCATTAAAGTAATCTTCAAT+TGG | - | chr4_2:72735948-72735967 | Msa0620930:intron | 20.0% |
| !! | TATTTCAAAACTTAAGAGAT+TGG | + | chr4_2:72736174-72736193 | None:intergenic | 20.0% |
| !!! | TTATAACTACTTCATCTTTT+AGG | - | chr4_2:72736351-72736370 | Msa0620930:intron | 20.0% |
| !!! | TGTTAAAAAGCTTTGAAACT+AGG | + | chr4_2:72732767-72732786 | Msa0620920:CDS | 25.0% |
| !!! | TTTCGAAAATCCATTTTTTC+TGG | + | chr4_2:72732997-72733016 | Msa0620920:CDS | 25.0% |
| !!! | ATGCTAGGTTTTTTCAAAAA+TGG | - | chr4_2:72733026-72733045 | Msa0620930:intron | 25.0% |
| !!! | TGCTAGGTTTTTTCAAAAAT+GGG | - | chr4_2:72733027-72733046 | Msa0620930:intron | 25.0% |
| !! | ATTTTCAAAAAAGAGATGGT+AGG | - | chr4_2:72733143-72733162 | Msa0620930:intron | 25.0% |
| !!! | TCAAAAGTACTGAAAATGAT+AGG | - | chr4_2:72733215-72733234 | Msa0620930:intron | 25.0% |
| !!! | TCAAAAGTACTGAAAATTCT+AGG | - | chr4_2:72733429-72733448 | Msa0620930:intron | 25.0% |
| !!! | CAAAAGTACTGAAAATTCTA+GGG | - | chr4_2:72733430-72733449 | Msa0620930:intron | 25.0% |
| !!! | TTTCGAAAATCCATTTTTTC+CGG | + | chr4_2:72732997-72733016 | Msa0620920:CDS | 25.0% |
| ! | TCAAAAATTGTAAAGGAAAG+TGG | - | chr4_2:72733573-72733592 | Msa0620930:intron | 25.0% |
| ! | CAAAAATTGTAAAGGAAAGT+GGG | - | chr4_2:72733574-72733593 | Msa0620930:intron | 25.0% |
| ! | AAAAATTGTAAAGGAAAGTG+GGG | - | chr4_2:72733575-72733594 | Msa0620930:intron | 25.0% |
| !! | AAAATGAAAACTGAAAGCAT+TGG | - | chr4_2:72733645-72733664 | Msa0620930:intron | 25.0% |
| !!! | TGTGCAATTGTACTTATTTT+GGG | - | chr4_2:72733698-72733717 | Msa0620930:intron | 25.0% |
| ! | TATCATGTATAAACTACAAC+AGG | + | chr4_2:72733874-72733893 | None:intergenic | 25.0% |
| ! | ATAGTCAAAGAAAATGAAGA+GGG | + | chr4_2:72734045-72734064 | None:intergenic | 25.0% |
| ! | TATAGTCAAAGAAAATGAAG+AGG | + | chr4_2:72734046-72734065 | None:intergenic | 25.0% |
| ! | AAATAAGACTATGGTTATGT+GGG | - | chr4_2:72734075-72734094 | Msa0620930:intron | 25.0% |
| ! | CAAAATAAGAGATATAGTGT+AGG | - | chr4_2:72734381-72734400 | Msa0620930:intron | 25.0% |
| !!! | AAACTTGTTCTTTTCTATCT+AGG | + | chr4_2:72734753-72734772 | None:intergenic | 25.0% |
| !!! | TTTATTTTATTTTGGCCCAT+GGG | + | chr4_2:72734942-72734961 | None:intergenic | 25.0% |
| !!! | TTTTATTTTATTTTGGCCCA+TGG | + | chr4_2:72734943-72734962 | None:intergenic | 25.0% |
| ! | TCTTTGTTAAAATGAGAACT+CGG | + | chr4_2:72735082-72735101 | None:intergenic | 25.0% |
| !!! | TGCTACTACATTTTTTCAAT+GGG | + | chr4_2:72735160-72735179 | None:intergenic | 25.0% |
| !!! | ATGCTACTACATTTTTTCAA+TGG | + | chr4_2:72735161-72735180 | None:intergenic | 25.0% |
| !!! | AAAGTTTTAATCAAGAGGAA+GGG | + | chr4_2:72735222-72735241 | None:intergenic | 25.0% |
| !!! | TAAAGTTTTAATCAAGAGGA+AGG | + | chr4_2:72735223-72735242 | None:intergenic | 25.0% |
| ! | TTCCTCTTGATTAAAACTTT+AGG | - | chr4_2:72735222-72735241 | Msa0620930:intron | 25.0% |
| ! | GTTCTATTGTCAATTACTTA+TGG | + | chr4_2:72735456-72735475 | None:intergenic | 25.0% |
| ! | TTCTTAAGGTTCTATTCAAA+TGG | + | chr4_2:72735497-72735516 | None:intergenic | 25.0% |
| ! | CATAGAAAAATGATTGAATG+GGG | + | chr4_2:72735531-72735550 | None:intergenic | 25.0% |
| ! | TCAATTATGAATATTTGCAC+TGG | + | chr4_2:72735758-72735777 | None:intergenic | 25.0% |
| ! | TTGTTTCATAACTTCAGTTT+GGG | + | chr4_2:72735868-72735887 | None:intergenic | 25.0% |
| ! | TTTGTTTCATAACTTCAGTT+TGG | + | chr4_2:72735869-72735888 | None:intergenic | 25.0% |
| ! | AATTCTCCAAAAAATATGGA+TGG | - | chr4_2:72735887-72735906 | Msa0620930:intron | 25.0% |
| !!! | CATATTCCATCCATATTTTT+TGG | + | chr4_2:72735896-72735915 | None:intergenic | 25.0% |
| ! | TTGGGGATAAAAAAAATAGA+CGG | + | chr4_2:72736104-72736123 | None:intergenic | 25.0% |
| !!! | AAACTTAAGAGATTGGTTTA+TGG | + | chr4_2:72736167-72736186 | None:intergenic | 25.0% |
| ! | TGTTTCTTAAAACCATGTTA+TGG | - | chr4_2:72736324-72736343 | Msa0620930:intron | 25.0% |
| CAATGTTGTGGTTAAAAAAG+AGG | - | chr4_2:72732595-72732614 | Msa0620930:CDS | 30.0% | |
| GTTAAAAAAGAGGAGTTGAA+TGG | - | chr4_2:72732605-72732624 | Msa0620930:CDS | 30.0% | |
| !! | AATAATGGTAGTGGGAAATT+TGG | - | chr4_2:72732740-72732759 | Msa0620930:CDS | 30.0% |
| !! | AGCTTTTTAACATTTGCTAG+TGG | - | chr4_2:72732775-72732794 | Msa0620930:CDS | 30.0% |
| ACAACAATCGAGATTTATCA+AGG | - | chr4_2:72732803-72732822 | Msa0620930:CDS | 30.0% | |
| AATCGAGATTTATCAAGGTT+AGG | - | chr4_2:72732808-72732827 | Msa0620930:CDS | 30.0% | |
| ATCGAGATTTATCAAGGTTA+GGG | - | chr4_2:72732809-72732828 | Msa0620930:CDS | 30.0% | |
| ATTGTTAACAAAGAGATGGT+AGG | - | chr4_2:72732928-72732947 | Msa0620930:intron | 30.0% | |
| !! | TCGAAAGTACTAAAAATGCT+AGG | - | chr4_2:72733011-72733030 | Msa0620930:intron | 30.0% |
| !!! | AGGTTTTTTCAAAAATGGGA+TGG | - | chr4_2:72733031-72733050 | Msa0620930:intron | 30.0% |
| !! | TTTTTCAAAAATGGGATGGT+AGG | - | chr4_2:72733035-72733054 | Msa0620930:intron | 30.0% |
| !! | TTGAAAGTACTGAAAATGCT+AGG | - | chr4_2:72733118-72733137 | Msa0620930:intron | 30.0% |
| !! | TGAAAGTACTGAAAATGCTA+GGG | - | chr4_2:72733119-72733138 | Msa0620930:intron | 30.0% |
| ! | GGGTATTTTCAAAAAAGAGA+TGG | - | chr4_2:72733139-72733158 | Msa0620930:intron | 30.0% |
| !!! | GGTTTTTTTCAAAAAAGGCA+TGG | - | chr4_2:72733236-72733255 | Msa0620930:intron | 30.0% |
| !! | TTTTTCAAAAAAGGCATGGA+AGG | - | chr4_2:72733240-72733259 | Msa0620930:intron | 30.0% |
| !! | TGAAAGCATTGGAAGTAATT+AGG | - | chr4_2:72733656-72733675 | Msa0620930:intron | 30.0% |
| ! | GTGTGCAATTGTACTTATTT+TGG | - | chr4_2:72733697-72733716 | Msa0620930:intron | 30.0% |
| !!! | GTGCAATTGTACTTATTTTG+GGG | - | chr4_2:72733699-72733718 | Msa0620930:intron | 30.0% |
| !!! | ATTAACACGTTTGTTTTGCT+TGG | - | chr4_2:72733729-72733748 | Msa0620930:intron | 30.0% |
| ATCAAATGTGTACTCTTACT+CGG | + | chr4_2:72733851-72733870 | None:intergenic | 30.0% | |
| TTAGGTCATAAGCTTTACAA+GGG | + | chr4_2:72733919-72733938 | None:intergenic | 30.0% | |
| ATTAGGTCATAAGCTTTACA+AGG | + | chr4_2:72733920-72733939 | None:intergenic | 30.0% | |
| ! | TTTTATGTACTTTAAGTGCC+CGG | - | chr4_2:72733952-72733971 | Msa0620930:intron | 30.0% |
| TAGTCAAAGAAAATGAAGAG+GGG | + | chr4_2:72734044-72734063 | None:intergenic | 30.0% | |
| TCATGTGTCAAATAAGACTA+TGG | - | chr4_2:72734066-72734085 | Msa0620930:intron | 30.0% | |
| CAAATAAGACTATGGTTATG+TGG | - | chr4_2:72734074-72734093 | Msa0620930:intron | 30.0% | |
| !! | CAATTTTTATTGGTTGGATC+AGG | - | chr4_2:72734133-72734152 | Msa0620930:intron | 30.0% |
| ! | ATTAGGATGTTTTCAGACTT+TGG | - | chr4_2:72734165-72734184 | Msa0620930:intron | 30.0% |
| !! | CTTCTATTTAGTTCTTAGAG+AGG | - | chr4_2:72734233-72734252 | Msa0620930:intron | 30.0% |
| ATAAGAGATATAGTGTAGGA+AGG | - | chr4_2:72734385-72734404 | Msa0620930:intron | 30.0% | |
| ACATACAGATTAGAATGCTT+TGG | + | chr4_2:72734461-72734480 | None:intergenic | 30.0% | |
| GTATTGCATTCTTGTCATAT+TGG | - | chr4_2:72734529-72734548 | Msa0620930:intron | 30.0% | |
| GTATTGCATTCTTGTCATAT+TGG | - | chr4_2:72734529-72734548 | Msa0620930:intron | 30.0% | |
| TATTGGATTCAAAATTTCGC+AGG | - | chr4_2:72734586-72734605 | Msa0620930:intron | 30.0% | |
| GAAAAGACATACAAGAAAAG+AGG | + | chr4_2:72734664-72734683 | None:intergenic | 30.0% | |
| CGACAAACCTATCAAAATAA+GGG | - | chr4_2:72734807-72734826 | Msa0620930:intron | 30.0% | |
| ! | AATGAAAAAGTGTGTCTCTT+AGG | - | chr4_2:72734877-72734896 | Msa0620930:intron | 30.0% |
| TGAAAGAAATAACAAACCCA+TGG | - | chr4_2:72734923-72734942 | Msa0620930:intron | 30.0% | |
| GAAAGAAATAACAAACCCAT+GGG | - | chr4_2:72734924-72734943 | Msa0620930:intron | 30.0% | |
| CTTTGTTAAAATGAGAACTC+GGG | + | chr4_2:72735081-72735100 | None:intergenic | 30.0% | |
| !! | TGATGGATCTAGAAAGTATT+CGG | + | chr4_2:72735185-72735204 | None:intergenic | 30.0% |
| ! | CTTTCTAGATCCATCATTTT+TGG | - | chr4_2:72735189-72735208 | Msa0620930:intron | 30.0% |
| !! | CTCCTAAAGTTTTAATCAAG+AGG | + | chr4_2:72735227-72735246 | None:intergenic | 30.0% |
| !!! | GGTTGATAATTGTTTTGCAT+AGG | + | chr4_2:72735278-72735297 | None:intergenic | 30.0% |
| GCAAAACAATTATCAACCTT+CGG | - | chr4_2:72735280-72735299 | Msa0620930:intron | 30.0% | |
| AATGGAAAATGTATGGTGAT+TGG | + | chr4_2:72735399-72735418 | None:intergenic | 30.0% | |
| ATTGTCAATTACTTATGGAG+CGG | + | chr4_2:72735451-72735470 | None:intergenic | 30.0% | |
| GTAATTGACAATAGAACAGA+AGG | - | chr4_2:72735459-72735478 | Msa0620930:intron | 30.0% | |
| ! | TAAGGTTATGCACTGTTTTA+AGG | + | chr4_2:72735649-72735668 | None:intergenic | 30.0% |
| TGTTTCATAACTTCAGTTTG+GGG | + | chr4_2:72735867-72735886 | None:intergenic | 30.0% | |
| !! | GTATGATTTGTTATGCTCTT+AGG | + | chr4_2:72736001-72736020 | None:intergenic | 30.0% |
| CAGGTATTTGAGAAGAAAAA+GGG | + | chr4_2:72736059-72736078 | None:intergenic | 30.0% | |
| ACAGGTATTTGAGAAGAAAA+AGG | + | chr4_2:72736060-72736079 | None:intergenic | 30.0% | |
| !! | CAGCTTTTGTTATGAACTTT+TGG | - | chr4_2:72736435-72736454 | Msa0620930:intron | 30.0% |
| GAGTAATGGTAACAATGTTG+TGG | - | chr4_2:72732583-72732602 | Msa0620930:CDS | 35.0% | |
| CTGTGATTGGGAACAAAATT+GGG | - | chr4_2:72732690-72732709 | Msa0620930:CDS | 35.0% | |
| TGTGATTGGGAACAAAATTG+GGG | - | chr4_2:72732691-72732710 | Msa0620930:CDS | 35.0% | |
| GATGGAAGAATAGGGAATAA+TGG | - | chr4_2:72732725-72732744 | Msa0620930:CDS | 35.0% | |
| AGAATAGGGAATAATGGTAG+TGG | - | chr4_2:72732731-72732750 | Msa0620930:CDS | 35.0% | |
| GAATAGGGAATAATGGTAGT+GGG | - | chr4_2:72732732-72732751 | Msa0620930:CDS | 35.0% | |
| AGAAGACAAGCCAGAAAAAA+TGG | - | chr4_2:72732984-72733003 | Msa0620930:intron | 35.0% | |
| TGATGATATAGAAGACAAGC+CGG | - | chr4_2:72733082-72733101 | Msa0620930:intron | 35.0% | |
| AGATGATATAGAAGACAAGC+TGG | - | chr4_2:72732975-72732994 | Msa0620930:intron | 35.0% | |
| AGAAGACAAGCTGGTAAAAA+TGG | - | chr4_2:72733188-72733207 | Msa0620930:intron | 35.0% | |
| TGATGATATAGAAGACAAGC+TGG | - | chr4_2:72733082-72733101 | Msa0620930:intron | 35.0% | |
| AGAAGACAAGCTGGAAAAAT+TGG | - | chr4_2:72733296-72733315 | Msa0620930:intron | 35.0% | |
| GAGATATATAGAAGACAAGC+CGG | - | chr4_2:72733393-72733412 | Msa0620930:intron | 35.0% | |
| !! | TCGAAAGTACTGAAAATGCT+AGG | - | chr4_2:72733543-72733562 | Msa0620930:intron | 35.0% |
| CACACAGAAAAGGAAATTCA+GGG | + | chr4_2:72733682-72733701 | None:intergenic | 35.0% | |
| AGTACAATTGCACACAGAAA+AGG | + | chr4_2:72733692-72733711 | None:intergenic | 35.0% | |
| GTTTGAATGCAGATAGACAA+GGG | - | chr4_2:72733751-72733770 | Msa0620930:intron | 35.0% | |
| GTTTGAATGCAGATAGACAA+GGG | - | chr4_2:72733751-72733770 | Msa0620930:intron | 35.0% | |
| GAATGGAATGGATACATGAA+AGG | + | chr4_2:72733897-72733916 | None:intergenic | 35.0% | |
| TCATAAGCTTTACAAGGGAA+TGG | + | chr4_2:72733914-72733933 | None:intergenic | 35.0% | |
| TTAGTAGGTGAAATTCGTGT+AGG | - | chr4_2:72734304-72734323 | Msa0620930:intron | 35.0% | |
| AGGTTTCACCATTAAGAGAA+TGG | - | chr4_2:72734324-72734343 | Msa0620930:intron | 35.0% | |
| GGTTTCACCATTAAGAGAAT+GGG | - | chr4_2:72734325-72734344 | Msa0620930:intron | 35.0% | |
| TATGAGACCCATTCTCTTAA+TGG | + | chr4_2:72734335-72734354 | None:intergenic | 35.0% | |
| AGAGAATGGGTCTCATAAAA+TGG | - | chr4_2:72734338-72734357 | Msa0620930:intron | 35.0% | |
| AGCGACAAACTTGTGAAAAT+AGG | - | chr4_2:72734776-72734795 | Msa0620930:intron | 35.0% | |
| GCGACAAACTTGTGAAAATA+GGG | - | chr4_2:72734777-72734796 | Msa0620930:intron | 35.0% | |
| GCGACAAACCTATCAAAATA+AGG | - | chr4_2:72734806-72734825 | Msa0620930:intron | 35.0% | |
| ACCTATCAAAATAAGGGTTC+CGG | - | chr4_2:72734813-72734832 | Msa0620930:intron | 35.0% | |
| ! | AGATTTTCTCTCAATTCTGG+TGG | + | chr4_2:72734842-72734861 | None:intergenic | 35.0% |
| ! | TCGAGATTTTCTCTCAATTC+TGG | + | chr4_2:72734845-72734864 | None:intergenic | 35.0% |
| !! | GATGGTGGTTTCTTTTTCAT+TGG | + | chr4_2:72735128-72735147 | None:intergenic | 35.0% |
| !!! | ACATTTTTTCAATGGGATCC+AGG | + | chr4_2:72735153-72735172 | None:intergenic | 35.0% |
| ! | TTTTAATCAAGAGGAAGGGT+TGG | + | chr4_2:72735218-72735237 | None:intergenic | 35.0% |
| CTTTAATCTTTCAACACCGA+AGG | + | chr4_2:72735299-72735318 | None:intergenic | 35.0% | |
| !! | CTTCGGTGTTGAAAGATTAA+AGG | - | chr4_2:72735297-72735316 | Msa0620930:intron | 35.0% |
| GATATCTCTCAATCAAAGAG+TGG | - | chr4_2:72735319-72735338 | Msa0620930:intron | 35.0% | |
| CTTGGACAATGGAAAATGTA+TGG | + | chr4_2:72735406-72735425 | None:intergenic | 35.0% | |
| ATTGACAATAGAACAGAAGG+AGG | - | chr4_2:72735462-72735481 | Msa0620930:intron | 35.0% | |
| !!! | CATGTTTTGAAGCTTATGCA+TGG | + | chr4_2:72735599-72735618 | None:intergenic | 35.0% |
| ! | CTTGAAACTGCACTGTTTTA+AGG | + | chr4_2:72735667-72735686 | None:intergenic | 35.0% |
| AGGAGATACACTATATCAGA+AGG | + | chr4_2:72735706-72735725 | None:intergenic | 35.0% | |
| ACTTTAATGAATTGTGGCTG+AGG | + | chr4_2:72735938-72735957 | None:intergenic | 35.0% | |
| ! | CAGTTGGATTTGATAGTTTG+GGG | + | chr4_2:72736121-72736140 | None:intergenic | 35.0% |
| ! | GCAGTTGGATTTGATAGTTT+GGG | + | chr4_2:72736122-72736141 | None:intergenic | 35.0% |
| TGAGATTACTGCTATAAGAG+AGG | + | chr4_2:72736285-72736304 | None:intergenic | 35.0% | |
| AGTTATAAGCTGCCATAACA+TGG | + | chr4_2:72736339-72736358 | None:intergenic | 35.0% | |
| !! | GCATATAAAGGTGTTGAATG+TGG | + | chr4_2:72736407-72736426 | None:intergenic | 35.0% |
| ! | GCTGTTGAAGAAGCATATAA+AGG | + | chr4_2:72736419-72736438 | None:intergenic | 35.0% |
| TGTTTGCGCTTCAAAAGCTT+CGG | - | chr4_2:72732546-72732565 | Msa0620930:CDS | 40.0% | |
| AAAAGCTTCGGGGTTCAATT+GGG | - | chr4_2:72732558-72732577 | Msa0620930:CDS | 40.0% | |
| !! | GGTTCAATTGGGTTGAGTAA+TGG | - | chr4_2:72732569-72732588 | Msa0620930:CDS | 40.0% |
| ! | CCAATTTTGTTCCCAATCAC+AGG | + | chr4_2:72732692-72732711 | Msa0620920:CDS | 40.0% |
| CCTGTGATTGGGAACAAAAT+TGG | - | chr4_2:72732689-72732708 | Msa0620930:CDS | 40.0% | |
| GTGATTGGGAACAAAATTGG+GGG | - | chr4_2:72732692-72732711 | Msa0620930:CDS | 40.0% | |
| ! | AACGGAAGTGATGGAAGAAT+AGG | - | chr4_2:72732716-72732735 | Msa0620930:CDS | 40.0% |
| ! | ACGGAAGTGATGGAAGAATA+GGG | - | chr4_2:72732717-72732736 | Msa0620930:CDS | 40.0% |
| AGAAGACAAGCCGGAAAAAT+TGG | - | chr4_2:72733091-72733110 | Msa0620930:intron | 40.0% | |
| TAAAAAAGAGATGGTAGGCG+CGG | - | chr4_2:72733352-72733371 | Msa0620930:intron | 40.0% | |
| AGAAGACAAGCCGGAAAAAA+TGG | - | chr4_2:72733402-72733421 | Msa0620930:intron | 40.0% | |
| GCGTGTAGCTATAATTGTGA+TGG | - | chr4_2:72733484-72733503 | Msa0620930:intron | 40.0% | |
| GCACACAGAAAAGGAAATTC+AGG | + | chr4_2:72733683-72733702 | None:intergenic | 40.0% | |
| GGTTTGAATGCAGATAGACA+AGG | - | chr4_2:72733750-72733769 | Msa0620930:intron | 40.0% | |
| GGTTTGAATGCAGATAGACA+AGG | - | chr4_2:72733750-72733769 | Msa0620930:intron | 40.0% | |
| AGCTTTACAAGGGAATGGAA+TGG | + | chr4_2:72733909-72733928 | None:intergenic | 40.0% | |
| AGCTCAAACCTAATTACAGC+CGG | + | chr4_2:72733974-72733993 | None:intergenic | 40.0% | |
| ! | TGAAGAGGGGAGTGTAAAAA+TGG | + | chr4_2:72734031-72734050 | None:intergenic | 40.0% |
| GGATCAGGAACTCTTTCATT+AGG | - | chr4_2:72734148-72734167 | Msa0620930:intron | 40.0% | |
| GCTCTCAAATATGCAACTCA+TGG | + | chr4_2:72734214-72734233 | None:intergenic | 40.0% | |
| GATTCAAAATTTCGCAGGAG+TGG | - | chr4_2:72734591-72734610 | Msa0620930:intron | 40.0% | |
| GGTTTCATTCAAATTGTGCG+TGG | - | chr4_2:72734612-72734631 | Msa0620930:intron | 40.0% | |
| GATGAATTGTTGACGCAGTA+CGG | - | chr4_2:72734702-72734721 | Msa0620930:intron | 40.0% | |
| !!! | TCCGGAACCCTTATTTTGAT+AGG | + | chr4_2:72734817-72734836 | None:intergenic | 40.0% |
| !! | GGTGGTTTCTTTTTCATTGG+AGG | + | chr4_2:72735125-72735144 | None:intergenic | 40.0% |
| !!! | TTTTTTCAATGGGATCCAGG+AGG | + | chr4_2:72735150-72735169 | None:intergenic | 40.0% |
| !! | GGGTTGGTTTCCAAAAATGA+TGG | + | chr4_2:72735202-72735221 | None:intergenic | 40.0% |
| GCATAGGAAGATGATCTACA+AGG | + | chr4_2:72735262-72735281 | None:intergenic | 40.0% | |
| GAAGAAGCTAACTTGGACAA+TGG | + | chr4_2:72735417-72735436 | None:intergenic | 40.0% | |
| !! | TTTTGGGGAAGAAGCTAACT+TGG | + | chr4_2:72735424-72735443 | None:intergenic | 40.0% |
| ! | TTATGGAGCGGCAAATTTTG+GGG | + | chr4_2:72735439-72735458 | None:intergenic | 40.0% |
| ! | CTTATGGAGCGGCAAATTTT+GGG | + | chr4_2:72735440-72735459 | None:intergenic | 40.0% |
| ! | ACTTATGGAGCGGCAAATTT+TGG | + | chr4_2:72735441-72735460 | None:intergenic | 40.0% |
| !! | GGGAAGTGTTCATGTTCTTA+AGG | + | chr4_2:72735511-72735530 | None:intergenic | 40.0% |
| AAGCTTCAAAACATGCAGAC+TGG | - | chr4_2:72735604-72735623 | Msa0620930:intron | 40.0% | |
| !! | TAAGGCACTGCTAAACACAT+CGG | + | chr4_2:72735631-72735650 | None:intergenic | 40.0% |
| TATCTCCTTTAACCAGCTTG+TGG | - | chr4_2:72735718-72735737 | Msa0620930:intron | 40.0% | |
| ! | TAACTTCAGTTTGGGGCAAT+GGG | + | chr4_2:72735860-72735879 | None:intergenic | 40.0% |
| ! | ATAACTTCAGTTTGGGGCAA+TGG | + | chr4_2:72735861-72735880 | None:intergenic | 40.0% |
| ! | GGCAGTTGGATTTGATAGTT+TGG | + | chr4_2:72736123-72736142 | None:intergenic | 40.0% |
| GAACCTTGTCTAATGTGCTT+TGG | + | chr4_2:72736206-72736225 | None:intergenic | 40.0% | |
| ! | AGAAGCATAGATTCCACAGT+CGG | - | chr4_2:72736229-72736248 | Msa0620930:intron | 40.0% |
| ! | CAAATTTACCTTACCGACTG+TGG | + | chr4_2:72736245-72736264 | None:intergenic | 40.0% |
| CCACAAATCTTATGCTGTAG+AGG | + | chr4_2:72736468-72736487 | None:intergenic | 40.0% | |
| CCTCTACAGCATAAGATTTG+TGG | - | chr4_2:72736465-72736484 | Msa0620930:CDS | 40.0% | |
| TCAAGGAATTGCATGTAGAC+GGG | + | chr4_2:72736508-72736527 | None:intergenic | 40.0% | |
| CTCAAGGAATTGCATGTAGA+CGG | + | chr4_2:72736509-72736528 | None:intergenic | 40.0% | |
| GTTTGCGCTTCAAAAGCTTC+GGG | - | chr4_2:72732547-72732566 | Msa0620930:CDS | 45.0% | |
| TTTGCGCTTCAAAAGCTTCG+GGG | - | chr4_2:72732548-72732567 | Msa0620930:CDS | 45.0% | |
| CAAAAGCTTCGGGGTTCAAT+TGG | - | chr4_2:72732557-72732576 | Msa0620930:CDS | 45.0% | |
| CTGCTAATGAGAGGACCATT+CGG | + | chr4_2:72732644-72732663 | Msa0620920:CDS | 45.0% | |
| GTCCTCTCATTAGCAGAGTT+GGG | - | chr4_2:72732648-72732667 | Msa0620930:CDS | 45.0% | |
| TCCTCTCATTAGCAGAGTTG+GGG | - | chr4_2:72732649-72732668 | Msa0620930:CDS | 45.0% | |
| ATTAGCAGAGTTGGGGCTAA+TGG | - | chr4_2:72732656-72732675 | Msa0620930:CDS | 45.0% | |
| AGAGTTGGGGCTAATGGAAT+TGG | - | chr4_2:72732662-72732681 | Msa0620930:CDS | 45.0% | |
| GAGTTGGGGCTAATGGAATT+GGG | - | chr4_2:72732663-72732682 | Msa0620930:CDS | 45.0% | |
| GAATTGGGAGTCCTGTGATT+GGG | - | chr4_2:72732678-72732697 | Msa0620930:CDS | 45.0% | |
| GGGAACAAAATTGGGGGTAA+CGG | - | chr4_2:72732698-72732717 | Msa0620930:CDS | 45.0% | |
| AAAAAAGAGATGGTAGGCGC+GGG | - | chr4_2:72733353-72733372 | Msa0620930:intron | 45.0% | |
| AGATGATATCGACGACAAGC+CGG | - | chr4_2:72733507-72733526 | Msa0620930:intron | 45.0% | |
| AATGCAGATAGACAAGGGCA+TGG | - | chr4_2:72733756-72733775 | Msa0620930:intron | 45.0% | |
| ! | ATGCAGATAGACAAGGGCAT+GGG | - | chr4_2:72733757-72733776 | Msa0620930:intron | 45.0% |
| AATGCAGATAGACAAGGGCT+TGG | - | chr4_2:72733794-72733813 | Msa0620930:intron | 45.0% | |
| ATGCAGATAGACAAGGGCTT+GGG | - | chr4_2:72733795-72733814 | Msa0620930:intron | 45.0% | |
| TTAAGTGCCCGGCTGTAATT+AGG | - | chr4_2:72733963-72733982 | Msa0620930:intron | 45.0% | |
| GCTCAAACCTAATTACAGCC+GGG | + | chr4_2:72733973-72733992 | None:intergenic | 45.0% | |
| AGTTTCATTCCTGCGAGACT+TGG | - | chr4_2:72734490-72734509 | Msa0620930:intron | 45.0% | |
| GTTTCATTCCTGCGAGACTT+GGG | - | chr4_2:72734491-72734510 | Msa0620930:intron | 45.0% | |
| TTTCATTCCTGCGAGACTTG+GGG | - | chr4_2:72734492-72734511 | Msa0620930:intron | 45.0% | |
| CTATTATCCTCACAGTTGCC+TGG | - | chr4_2:72734638-72734657 | Msa0620930:intron | 45.0% | |
| GACATACAAGAAAAGAGGCC+AGG | + | chr4_2:72734659-72734678 | None:intergenic | 45.0% | |
| !! | CTCTCAATTCTGGTGGATTC+CGG | + | chr4_2:72734835-72734854 | None:intergenic | 45.0% |
| TTGGAGGAGTCAACATGCAT+GGG | + | chr4_2:72735109-72735128 | None:intergenic | 45.0% | |
| ATTGGAGGAGTCAACATGCA+TGG | + | chr4_2:72735110-72735129 | None:intergenic | 45.0% | |
| AAAAGAAACCACCATCCTCC+TGG | - | chr4_2:72735132-72735151 | Msa0620930:intron | 45.0% | |
| GCATTCCACAAGCTGGTTAA+AGG | + | chr4_2:72735726-72735745 | None:intergenic | 45.0% | |
| GGCAATGGGCAATACATTCT+TGG | + | chr4_2:72735846-72735865 | None:intergenic | 45.0% | |
| TGCTGCTGAAATTGCAGAAC+AGG | + | chr4_2:72736078-72736097 | None:intergenic | 45.0% | |
| AGCCAAAGCAGAAGTTGCAA+GGG | + | chr4_2:72736144-72736163 | None:intergenic | 45.0% | |
| GCACCAAAGCACATTAGACA+AGG | - | chr4_2:72736200-72736219 | Msa0620930:intron | 45.0% | |
| CATAGATTCCACAGTCGGTA+AGG | - | chr4_2:72736234-72736253 | Msa0620930:intron | 45.0% | |
| AAGAGAGGCTTGTCAAAAGC+TGG | + | chr4_2:72736270-72736289 | None:intergenic | 45.0% | |
| AGTAATCTCAGCATGAGCAG+TGG | - | chr4_2:72736295-72736314 | Msa0620930:intron | 45.0% | |
| GTAATCTCAGCATGAGCAGT+GGG | - | chr4_2:72736296-72736315 | Msa0620930:intron | 45.0% | |
| AGGACAGTGATTGCACCAAA+TGG | - | chr4_2:72736371-72736390 | Msa0620930:intron | 45.0% | |
| GGACAGTGATTGCACCAAAT+GGG | - | chr4_2:72736372-72736391 | Msa0620930:intron | 45.0% | |
| CAAGGAATTGCATGTAGACG+GGG | + | chr4_2:72736507-72736526 | None:intergenic | 45.0% | |
| ATTCCTTGAGTCCAATGCGA+CGG | - | chr4_2:72736519-72736538 | Msa0620930:CDS | 45.0% | |
| GGTCCTCTCATTAGCAGAGT+TGG | - | chr4_2:72732647-72732666 | Msa0620930:CDS | 50.0% | |
| GGAATTGGGAGTCCTGTGAT+TGG | - | chr4_2:72732677-72732696 | Msa0620930:CDS | 50.0% | |
| !! | ATTGGGGGTAACGGAAGTGA+TGG | - | chr4_2:72732707-72732726 | Msa0620930:CDS | 50.0% |
| CGACGACAAGCCGGAAAAAA+TGG | - | chr4_2:72733516-72733535 | Msa0620930:intron | 50.0% | |
| !! | ACAAGGGCATGGGTTTTGCT+TGG | - | chr4_2:72733767-72733786 | Msa0620930:intron | 50.0% |
| !! | GGCTTGGGTGTTTCTAGAGT+TGG | - | chr4_2:72733810-72733829 | Msa0620930:intron | 50.0% |
| !! | TTCTAGAGTTGGTGCTGCTG+TGG | - | chr4_2:72733821-72733840 | Msa0620930:intron | 50.0% |
| ! | GTCGAGTTCTTTAGAGGTGG+AGG | + | chr4_2:72735059-72735078 | None:intergenic | 50.0% |
| ACTCGGGTCGAGTTCTTTAG+AGG | + | chr4_2:72735065-72735084 | None:intergenic | 50.0% | |
| TTCAATGGGATCCAGGAGGA+TGG | + | chr4_2:72735146-72735165 | None:intergenic | 50.0% | |
| ACCAGCTTGTGGAATGCTGT+CGG | - | chr4_2:72735729-72735748 | Msa0620930:intron | 50.0% | |
| TGCCCTTGCAACTTCTGCTT+TGG | - | chr4_2:72736139-72736158 | Msa0620930:intron | 50.0% | |
| GAGCCAAAGCAGAAGTTGCA+AGG | + | chr4_2:72736145-72736164 | None:intergenic | 50.0% | |
| TGTGGTGATAGACGCCCATT+TGG | + | chr4_2:72736389-72736408 | None:intergenic | 50.0% | |
| TCGATGTGGCAGATTGGACA+TGG | - | chr4_2:72736568-72736587 | Msa0620930:CDS | 50.0% | |
| CGATGTGGCAGATTGGACAT+GGG | - | chr4_2:72736569-72736588 | Msa0620930:CDS | 50.0% | |
| TTCGAGCCAAAACGCTGCTT+CGG | - | chr4_2:72736639-72736658 | Msa0620930:CDS | 50.0% | |
| GCCCCAACTCTGCTAATGAG+AGG | + | chr4_2:72732653-72732672 | Msa0620920:CDS | 55.0% | |
| AAAGAGATGGTAGGCGCGCT+TGG | - | chr4_2:72732937-72732956 | Msa0620930:intron | 55.0% | |
| AAAGAGGCCAGGCAACTGTG+AGG | + | chr4_2:72734648-72734667 | None:intergenic | 55.0% | |
| ! | TTGACGCAGTACGGAAGCGT+AGG | - | chr4_2:72734711-72734730 | Msa0620930:intron | 55.0% |
| ! | TGACGCAGTACGGAAGCGTA+GGG | - | chr4_2:72734712-72734731 | Msa0620930:intron | 55.0% |
| TGGAGGAGACTGATGCAGGA+GGG | + | chr4_2:72735042-72735061 | None:intergenic | 55.0% | |
| ! | CGGGTCGAGTTCTTTAGAGG+TGG | + | chr4_2:72735062-72735081 | None:intergenic | 55.0% |
| AATGGGATCCAGGAGGATGG+TGG | + | chr4_2:72735143-72735162 | None:intergenic | 55.0% | |
| TCCGACAGCATTCCACAAGC+TGG | + | chr4_2:72735733-72735752 | None:intergenic | 55.0% | |
| GCAGAAGTTGCAAGGGCAGT+TGG | + | chr4_2:72736137-72736156 | None:intergenic | 55.0% | |
| ! | GGTTTTGCTGGTGGTCGATG+TGG | - | chr4_2:72736554-72736573 | Msa0620930:CDS | 55.0% |
| TGGTGGTCGATGTGGCAGAT+TGG | - | chr4_2:72736562-72736581 | Msa0620930:CDS | 55.0% | |
| GTGGCAGATTGGACATGGGT+CGG | - | chr4_2:72736573-72736592 | Msa0620930:CDS | 55.0% | |
| ! | ACCAGACCGAAGCAGCGTTT+TGG | + | chr4_2:72736648-72736667 | None:intergenic | 55.0% |
| AAAACGCTGCTTCGGTCTGG+TGG | - | chr4_2:72736647-72736666 | Msa0620930:CDS | 55.0% | |
| GGACATTCGCAGTCGCCGAA+TGG | - | chr4_2:72732626-72732645 | Msa0620930:CDS | 60.0% | |
| GCTACATCCCCAAGTCTCGC+AGG | + | chr4_2:72734502-72734521 | None:intergenic | 60.0% | |
| GTGGAGGAGACTGATGCAGG+AGG | + | chr4_2:72735043-72735062 | None:intergenic | 60.0% | |
| GAGGTGGAGGAGACTGATGC+AGG | + | chr4_2:72735046-72735065 | None:intergenic | 60.0% | |
| CAGCCGTCGCATTGGACTCA+AGG | + | chr4_2:72736525-72736544 | None:intergenic | 60.0% | |
| CCAATGCGACGGCTGTGATG+CGG | - | chr4_2:72736530-72736549 | Msa0620930:CDS | 60.0% | |
| ! | CTGTGATGCGGCGGTTTTGC+TGG | - | chr4_2:72736542-72736561 | Msa0620930:CDS | 60.0% |
| ! | TGATGCGGCGGTTTTGCTGG+TGG | - | chr4_2:72736545-72736564 | Msa0620930:CDS | 60.0% |
| GCCAAAACGCTGCTTCGGTC+TGG | - | chr4_2:72736644-72736663 | Msa0620930:CDS | 60.0% | |
| CCGCATCACAGCCGTCGCAT+TGG | + | chr4_2:72736533-72736552 | None:intergenic | 65.0% | |
| ATGCGACGGCTGTGATGCGG+CGG | - | chr4_2:72736533-72736552 | Msa0620930:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 72732509 | 72736699 | 72732509 | ID=Msa0620930;Name=Msa0620930 |
| chr4_2 | mRNA | 72732509 | 72736699 | 72732509 | ID=Msa0620930-mRNA-1;Parent=Msa0620930;Name=Msa0620930-mRNA-1;_AED=0.63;_eAED=0.63;_QI=0|0|0|0.8|0.5|0.6|5|0|216 |
| chr4_2 | exon | 72736462 | 72736699 | 72736462 | ID=Msa0620930-mRNA-1:exon:21784;Parent=Msa0620930-mRNA-1 |
| chr4_2 | exon | 72735420 | 72735445 | 72735420 | ID=Msa0620930-mRNA-1:exon:21783;Parent=Msa0620930-mRNA-1 |
| chr4_2 | exon | 72735357 | 72735407 | 72735357 | ID=Msa0620930-mRNA-1:exon:21782;Parent=Msa0620930-mRNA-1 |
| chr4_2 | exon | 72735232 | 72735240 | 72735232 | ID=Msa0620930-mRNA-1:exon:21781;Parent=Msa0620930-mRNA-1 |
| chr4_2 | exon | 72732509 | 72732835 | 72732509 | ID=Msa0620930-mRNA-1:exon:21780;Parent=Msa0620930-mRNA-1 |
| chr4_2 | CDS | 72736462 | 72736699 | 72736462 | ID=Msa0620930-mRNA-1:cds;Parent=Msa0620930-mRNA-1 |
| chr4_2 | CDS | 72735420 | 72735445 | 72735420 | ID=Msa0620930-mRNA-1:cds;Parent=Msa0620930-mRNA-1 |
| chr4_2 | CDS | 72735357 | 72735407 | 72735357 | ID=Msa0620930-mRNA-1:cds;Parent=Msa0620930-mRNA-1 |
| chr4_2 | CDS | 72735232 | 72735240 | 72735232 | ID=Msa0620930-mRNA-1:cds;Parent=Msa0620930-mRNA-1 |
| chr4_2 | CDS | 72732509 | 72732835 | 72732509 | ID=Msa0620930-mRNA-1:cds;Parent=Msa0620930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
