AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0206830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0206830 MtrunA17_Chr2g0305901 97.751 489 11 0 1 489 1 489 0.0 949
Msa0206830 MtrunA17_Chr4g0020881 55.115 479 185 4 24 485 31 496 0.0 523
Msa0206830 MtrunA17_Chr4g0055641 55.441 487 206 4 3 489 2 477 2.27e-175 502
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0206830 AT2G13100.4 72.746 488 128 2 4 489 2 486 0.0 711
Msa0206830 AT2G13100.1 72.746 488 128 2 4 489 2 486 0.0 711
Msa0206830 AT3G47420.2 54.076 503 209 4 1 487 5 501 0.0 519
Msa0206830 AT3G47420.1 54.076 503 209 4 1 487 5 501 0.0 519
Msa0206830 AT3G47420.3 54.076 503 209 4 1 487 5 501 0.0 519
Msa0206830 AT1G30560.1 51.230 488 216 3 16 489 10 489 3.80e-177 507
Msa0206830 AT4G17550.1 51.044 527 216 4 1 486 1 526 1.37e-174 502
Msa0206830 AT4G25220.1 53.304 454 199 2 30 483 36 476 8.66e-172 493
Msa0206830 AT2G13100.2 73.494 249 63 1 241 489 89 334 2.04e-124 367
Msa0206830 AT2G13100.2 56.481 108 44 1 4 108 2 109 1.19e-31 124
Msa0206830 AT2G13100.3 78.440 218 47 0 272 489 83 300 1.13e-117 348
Msa0206830 AT2G13100.3 67.045 88 29 0 4 91 2 89 2.82e-32 125

Find 146 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGATTCTAATATTAATTT+AGG 0.190955 2_1:+36867677 Msa0206830:five_prime_UTR
TTACTCCATTGGCATGTATT+TGG 0.217319 2_1:+36868023 Msa0206830:CDS
ATCACCTTGATGTTTCTTTC+TGG 0.224719 2_1:+36869038 Msa0206830:CDS
TGTTGGCACCAAATCTTAAA+TGG 0.258521 2_1:-36867603 None:intergenic
TTGAGGTTGTTTCTTGTGTT+TGG 0.258719 2_1:+36868072 Msa0206830:CDS
TTCCATCACCATTTAAGATT+TGG 0.266246 2_1:+36867595 Msa0206830:five_prime_UTR
CCTTGTGTTGTTGCAGTTGT+TGG 0.271567 2_1:+36868216 Msa0206830:CDS
CAGTTGTTGGGAATTGGCTT+GGG 0.271735 2_1:+36868229 Msa0206830:CDS
AACACCTTTGCGTGGAAAAC+CGG 0.271919 2_1:-36867531 None:intergenic
TAGTATTGTTAAAAGTGTTC+TGG 0.280648 2_1:+36867894 Msa0206830:CDS
TGATAATAAGAACACATATT+TGG 0.281967 2_1:-36867828 None:intergenic
TTTGATATTGGAGGAGTTCT+AGG 0.290006 2_1:+36868885 Msa0206830:CDS
CTCATTTCAATTTCCATTCC+AGG 0.291532 2_1:-36868453 None:intergenic
ATCAAAGAGGGGATTGATAA+TGG 0.292694 2_1:+36868254 Msa0206830:CDS
AGTTATTGCTTCGGGTGTTT+TGG 0.295231 2_1:+36868320 Msa0206830:CDS
TCAAATTCTTCGTCTGCTAT+TGG 0.299829 2_1:+36868555 Msa0206830:CDS
TTGCTTACACTTTCTTGTAT+TGG 0.304564 2_1:+36868646 Msa0206830:CDS
CTTTCAACAATATTTGATAT+TGG 0.314253 2_1:+36868873 Msa0206830:CDS
TGTGGAGTGTTTCAGTCAAT+TGG 0.315612 2_1:+36868189 Msa0206830:CDS
ACCTGTGTGCCTTATGTAGA+AGG 0.333717 2_1:-36868673 None:intergenic
TGAGGTTGTTTCTTGTGTTT+GGG 0.335721 2_1:+36868073 Msa0206830:CDS
TGGTTTGATGTTCATGTGTT+GGG 0.336491 2_1:+36868141 Msa0206830:CDS
GTGTTGGTTGCAGCGGTTGC+TGG 0.336822 2_1:+36868819 Msa0206830:intron
CATTGGTTCAGTTATTGCTT+CGG 0.342494 2_1:+36868311 Msa0206830:CDS
GCTTTAGTGGTGGGAATTCT+CGG 0.342732 2_1:+36869126 Msa0206830:CDS
AACCAATTCAACCCTTGATT+CGG 0.343395 2_1:+36867930 Msa0206830:CDS
GGTTCTGTTGGAGCTGCTCT+TGG 0.349690 2_1:+36869185 Msa0206830:CDS
CACATATTTGGTGGAATAGT+AGG 0.350389 2_1:-36867816 None:intergenic
GTTCCCCGAGTTCCATTAAA+AGG 0.352130 2_1:-36867961 None:intergenic
TCTTAAATGGTGATGGAAAT+TGG 0.355213 2_1:-36867590 None:intergenic
GGGGATTGATAATGGGGATA+TGG 0.364452 2_1:+36868262 Msa0206830:CDS
ACCAATTCAACCCTTGATTC+GGG 0.365317 2_1:+36867931 Msa0206830:CDS
TCAAAGAGGGGATTGATAAT+GGG 0.369497 2_1:+36868255 Msa0206830:CDS
TGATTCCATTCTTACTCATC+AGG 0.373030 2_1:-36867725 None:intergenic
GGTTGGTCGTTTGTGGTGCC+TGG 0.375096 2_1:+36868354 Msa0206830:CDS
ACCCGAATCAAGGGTTGAAT+TGG 0.376330 2_1:-36867932 None:intergenic
TTGTGAATCCCGTGGATATA+GGG 0.382740 2_1:+36868421 Msa0206830:CDS
CTCGGTACGCAGGGCTTTAG+TGG 0.382958 2_1:+36869113 Msa0206830:CDS
GCAGTTGTTGGGAATTGGCT+TGG 0.384000 2_1:+36868228 Msa0206830:CDS
GTTTCTTGTGTTTGGGATGG+TGG 0.396297 2_1:+36868080 Msa0206830:CDS
TTGTTGCAGTTGTTGGGAAT+TGG 0.403901 2_1:+36868223 Msa0206830:CDS
TCCATTGGCATGTATTTGGC+TGG 0.414022 2_1:+36868027 Msa0206830:CDS
TGGCTGGTCATGTTGGTGAT+AGG 0.414837 2_1:+36868043 Msa0206830:CDS
GTTGTGAATCCCGTGGATAT+AGG 0.415165 2_1:+36868420 Msa0206830:CDS
AGTATTGTTAAAAGTGTTCT+GGG 0.416808 2_1:+36867895 Msa0206830:CDS
CTTGTGTTGTTGCAGTTGTT+GGG 0.419466 2_1:+36868217 Msa0206830:CDS
GAATTTGAAATCGAACTATC+AGG 0.420709 2_1:-36868540 None:intergenic
ACGAAAATGATCAAAATTCC+AGG 0.423719 2_1:-36868372 None:intergenic
ACCTCGGTTGGGAATATCAT+TGG 0.423859 2_1:+36868294 Msa0206830:CDS
ATTGGTTACCCTTCTACATA+AGG 0.433887 2_1:+36868664 Msa0206830:CDS
ATTGGTTCAGTTATTGCTTC+GGG 0.436836 2_1:+36868312 Msa0206830:CDS
CTGGTTTGATGTTCATGTGT+TGG 0.438300 2_1:+36868140 Msa0206830:CDS
TGGATGGGGTTGGTCGTTTG+TGG 0.439831 2_1:+36868347 Msa0206830:CDS
AACACGACTTACAAGATTGT+TGG 0.442880 2_1:-36867620 None:intergenic
ACTGTTACTGCAATCATTGA+TGG 0.445070 2_1:+36869158 Msa0206830:CDS
TTTCTTACTTCTTACTCCAT+TGG 0.445900 2_1:+36868012 Msa0206830:CDS
AATCTATCTCACAAAACTGC+TGG 0.446010 2_1:+36868846 Msa0206830:CDS
GTGGAGTGTTTCAGTCAATT+GGG 0.451035 2_1:+36868190 Msa0206830:CDS
TCGGGCTCTTCGAAAATTCA+AGG 0.453510 2_1:-36867496 None:intergenic
AGCAGGTTATGTTTCAACTA+GGG 0.460785 2_1:+36869217 Msa0206830:CDS
GTCGGTGTTCAGATTGTTTG+TGG 0.462172 2_1:+36868171 Msa0206830:CDS
GATATAGGGTTTGCGAGTCC+TGG 0.467048 2_1:+36868435 Msa0206830:CDS
AACCGGGTTGTGTTCAGATC+GGG 0.473949 2_1:-36867514 None:intergenic
TGGAATTCGCATACCTCGGT+TGG 0.474948 2_1:+36868282 Msa0206830:CDS
ATGCTTCCTTTCATGCATCT+AGG 0.475318 2_1:+36867863 Msa0206830:CDS
CACAGATTTGATTATAGTCT+AGG 0.479247 2_1:+36869365 Msa0206830:three_prime_UTR
GGCTGCCGATCTCGGTACGC+AGG 0.479417 2_1:+36869103 Msa0206830:CDS
TGGAGCTAGGCTCAAACTCT+TGG 0.480620 2_1:-36867752 None:intergenic
CTTTAGTGGTGGGAATTCTC+GGG 0.483451 2_1:+36869127 Msa0206830:CDS
ATTGGCTTGGGGAATCAAAG+AGG 0.486300 2_1:+36868241 Msa0206830:CDS
ACTGCTGTGGCTGCCGATCT+CGG 0.489455 2_1:+36869095 Msa0206830:CDS
TAGCAGGTTATGTTTCAACT+AGG 0.490938 2_1:+36869216 Msa0206830:CDS
TGAATCCTGATGAGTAAGAA+TGG 0.492797 2_1:+36867720 Msa0206830:exon
CACCAAATCTTAAATGGTGA+TGG 0.493676 2_1:-36867597 None:intergenic
AAGGTGGCCAACCCGAATCA+AGG 0.495026 2_1:-36867942 None:intergenic
TGGTGGGAATTCTCGGGCAC+TGG 0.495438 2_1:+36869133 Msa0206830:CDS
TTTCTTGTGTTTGGGATGGT+GGG 0.499647 2_1:+36868081 Msa0206830:CDS
ACACCTTTGCGTGGAAAACC+GGG 0.501224 2_1:-36867530 None:intergenic
GAAATTGGTGAGAGCAAGAG+AGG 0.501444 2_1:-36867575 None:intergenic
AATCATATCAGAAATGAAAC+CGG 0.508019 2_1:-36868919 None:intergenic
TCAACAATATTTGATATTGG+AGG 0.508821 2_1:+36868876 Msa0206830:CDS
GGTACGCAGGGCTTTAGTGG+TGG 0.512487 2_1:+36869116 Msa0206830:CDS
ACTGCAATCATTGATGGTAC+TGG 0.512877 2_1:+36869164 Msa0206830:CDS
AAAGCCCTGCGTACCGAGAT+CGG 0.516139 2_1:-36869108 None:intergenic
GTTGTTTCTTGTGTTTGGGA+TGG 0.516674 2_1:+36868077 Msa0206830:CDS
GCACGATACAAAAGCAGAGC+TGG 0.518122 2_1:-36868987 None:intergenic
TATTCTTGATTCGAGTTGCA+AGG 0.520085 2_1:+36869291 Msa0206830:CDS
GAATCAAGGGTTGAATTGGT+TGG 0.521050 2_1:-36867928 None:intergenic
ATTGAAATGAGTGTTGAAAC+GGG 0.522480 2_1:+36868465 Msa0206830:CDS
GTGTTTGGGATGGTGGGCAG+CGG 0.524244 2_1:+36868087 Msa0206830:CDS
ACATATTTGGTGGAATAGTA+GGG 0.524391 2_1:-36867815 None:intergenic
GAAACATAACCTGCTAAAAG+TGG 0.525372 2_1:-36869209 None:intergenic
GTTGAATTGGTTGGAACTGT+GGG 0.528850 2_1:-36867919 None:intergenic
GGAATTCGCATACCTCGGTT+GGG 0.531280 2_1:+36868283 Msa0206830:CDS
GAATCGATAGAAACAAGAAC+AGG 0.531762 2_1:-36868965 None:intergenic
CAAAGAGGGGATTGATAATG+GGG 0.532878 2_1:+36868256 Msa0206830:CDS
ATTCAACCCTTGATTCGGGT+TGG 0.534837 2_1:+36867935 Msa0206830:CDS
GTACGCAGGGCTTTAGTGGT+GGG 0.535609 2_1:+36869117 Msa0206830:CDS
ACTCGGGGAACTCACCGGCT+TGG 0.537297 2_1:+36867973 Msa0206830:CDS
TTAGAGGCGTGGAAAATACC+TGG 0.539044 2_1:+36868582 Msa0206830:CDS
ATCTATCTCACAAAACTGCT+GGG 0.540237 2_1:+36868847 Msa0206830:CDS
AGTTGTTGGGAATTGGCTTG+GGG 0.544754 2_1:+36868230 Msa0206830:CDS
AGAGATTCAGAGCTGGAGCT+AGG 0.548429 2_1:-36867765 None:intergenic
TAATAAGAACACATATTTGG+TGG 0.548927 2_1:-36867825 None:intergenic
GCTGCCGATCTCGGTACGCA+GGG 0.553404 2_1:+36869104 Msa0206830:CDS
AAACCGGGTTGTGTTCAGAT+CGG 0.553649 2_1:-36867515 None:intergenic
AAAGCAAACGGAGCGACTCC+AGG 0.556148 2_1:-36868600 None:intergenic
GGTTGAATTGGTTGGAACTG+TGG 0.556170 2_1:-36867920 None:intergenic
AGGGTTTGCGAGTCCTGGAA+TGG 0.556603 2_1:+36868440 Msa0206830:CDS
AATTGAAATGAGTGTTGAAA+CGG 0.556957 2_1:+36868464 Msa0206830:CDS
GCAGGTTATGTTTCAACTAG+GGG 0.557122 2_1:+36869218 Msa0206830:CDS
GGGAACTCACCGGCTTGGCG+AGG 0.557718 2_1:+36867978 Msa0206830:CDS
ATGGAACTCGGGGAACTCAC+CGG 0.562728 2_1:+36867968 Msa0206830:CDS
GCAGTTGTAATTAGCGAGTA+CGG 0.564151 2_1:-36869077 None:intergenic
ATTGATGGTACTGGTTCTGT+TGG 0.568619 2_1:+36869173 Msa0206830:CDS
CGAGATCAACCTCGCCAAGC+CGG 0.572872 2_1:-36867987 None:intergenic
AGGCTTCCTAGATGCATGAA+AGG 0.573970 2_1:-36867869 None:intergenic
GGTTTGATGTTCATGTGTTG+GGG 0.575219 2_1:+36868142 Msa0206830:CDS
TTGGCTTGGGGAATCAAAGA+GGG 0.575740 2_1:+36868242 Msa0206830:CDS
ATGTATTTGGCTGGTCATGT+TGG 0.577593 2_1:+36868036 Msa0206830:CDS
TTTGGAAAGAGATTCAGAGC+TGG 0.577955 2_1:-36867772 None:intergenic
CCAACAACTGCAACAACACA+AGG 0.578535 2_1:-36868216 None:intergenic
GTTATGTTTCAACTAGGGGA+TGG 0.578568 2_1:+36869222 Msa0206830:CDS
AAATCCAGAAAGAAACATCA+AGG 0.579928 2_1:-36869042 None:intergenic
GTTCTAGGCGGAATCACCGC+CGG 0.584479 2_1:+36868900 Msa0206830:CDS
TGTTGAAACGGGCGGTGCAG+AGG 0.585857 2_1:+36868476 Msa0206830:CDS
CGGGCTCTTCGAAAATTCAA+GGG 0.594151 2_1:-36867495 None:intergenic
AGCCCGATCTGAACACAACC+CGG 0.596321 2_1:+36867512 Msa0206830:five_prime_UTR
CTCGCAAACCCTATATCCAC+GGG 0.599278 2_1:-36868429 None:intergenic
TCTGCAGAAAGTCGAATCAG+AGG 0.600067 2_1:+36868500 Msa0206830:CDS
AGGTGGCCAACCCGAATCAA+GGG 0.601656 2_1:-36867941 None:intergenic
ACTCGCAAACCCTATATCCA+CGG 0.607916 2_1:-36868430 None:intergenic
ACCAGCCAAATACATGCCAA+TGG 0.609265 2_1:-36868028 None:intergenic
CTCGCTAATTACAACTGCTG+TGG 0.611850 2_1:+36869082 Msa0206830:CDS
TTGGTGATAGGATTGATTTG+AGG 0.616292 2_1:+36868055 Msa0206830:CDS
CCTGTGTGCCTTATGTAGAA+GGG 0.616762 2_1:-36868672 None:intergenic
CCCCGAGTTCCATTAAAAGG+TGG 0.619590 2_1:-36867958 None:intergenic
CCCTTCTACATAAGGCACAC+AGG 0.627165 2_1:+36868672 Msa0206830:CDS
GATATGGAATTCGCATACCT+CGG 0.635544 2_1:+36868278 Msa0206830:CDS
GAGTGTTTCAGTCAATTGGG+TGG 0.653771 2_1:+36868193 Msa0206830:CDS
GTTTCTTGTTGTGAATCCCG+TGG 0.657187 2_1:+36868413 Msa0206830:CDS
TGGCTTGGGGAATCAAAGAG+GGG 0.677167 2_1:+36868243 Msa0206830:CDS
ACCAATGATATTCCCAACCG+AGG 0.679777 2_1:-36868295 None:intergenic
CATATCAGAAATGAAACCGG+CGG 0.690344 2_1:-36868916 None:intergenic
GATATTGGAGGAGTTCTAGG+CGG 0.700532 2_1:+36868888 Msa0206830:CDS
GAAATGAGTGTTGAAACGGG+CGG 0.861509 2_1:+36868468 Msa0206830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAGATTCTAATATTAATTT+AGG + chr2_1:36867677-36867696 Msa0206830:five_prime_UTR 15.0%
!! TATGTAAACTAAATAAGATA+TGG - chr2_1:36868756-36868775 None:intergenic 15.0%
!!! ACATATTTTGTAAAGTATAT+AGG + chr2_1:36869405-36869424 Msa0206830:three_prime_UTR 15.0%
!!! GTTATTGATAAAGAAATTTT+TGG + chr2_1:36869433-36869452 Msa0206830:three_prime_UTR 15.0%
!! AGAGATTCTAATATTAATTT+AGG + chr2_1:36867677-36867696 Msa0206830:five_prime_UTR 15.0%
!! TATGTAAACTAAATAAGATA+TGG - chr2_1:36868756-36868775 None:intergenic 15.0%
!!! ACATATTTTGTAAAGTATAT+AGG + chr2_1:36869405-36869424 Msa0206830:three_prime_UTR 15.0%
!!! GTTATTGATAAAGAAATTTT+TGG + chr2_1:36869433-36869452 Msa0206830:three_prime_UTR 15.0%
!! TGATAATAAGAACACATATT+TGG - chr2_1:36867831-36867850 None:intergenic 20.0%
!!! GTTTTTTTACGATACTTTTT+GGG + chr2_1:36868109-36868128 Msa0206830:CDS 20.0%
!!! TTGAATTTGTTATTTTGTGT+TGG + chr2_1:36868803-36868822 Msa0206830:intron 20.0%
!! CTTTCAACAATATTTGATAT+TGG + chr2_1:36868873-36868892 Msa0206830:CDS 20.0%
!! ACTCTTAATAAAAATGTCTA+CGG + chr2_1:36869510-36869529 Msa0206830:three_prime_UTR 20.0%
!! TGATAATAAGAACACATATT+TGG - chr2_1:36867831-36867850 None:intergenic 20.0%
!!! GTTTTTTTACGATACTTTTT+GGG + chr2_1:36868109-36868128 Msa0206830:CDS 20.0%
!!! TTGAATTTGTTATTTTGTGT+TGG + chr2_1:36868803-36868822 Msa0206830:intron 20.0%
!! CTTTCAACAATATTTGATAT+TGG + chr2_1:36868873-36868892 Msa0206830:CDS 20.0%
!! ACTCTTAATAAAAATGTCTA+CGG + chr2_1:36869510-36869529 Msa0206830:three_prime_UTR 20.0%
! TAATAAGAACACATATTTGG+TGG - chr2_1:36867828-36867847 None:intergenic 25.0%
!! AGAACACTTTTAACAATACT+AGG - chr2_1:36867895-36867914 None:intergenic 25.0%
!!! TAGTATTGTTAAAAGTGTTC+TGG + chr2_1:36867894-36867913 Msa0206830:CDS 25.0%
!!! AGTATTGTTAAAAGTGTTCT+GGG + chr2_1:36867895-36867914 Msa0206830:CDS 25.0%
!!! GGTTTTTTTACGATACTTTT+TGG + chr2_1:36868108-36868127 Msa0206830:CDS 25.0%
!!! GAATTTTGATCATTTTCGTT+GGG + chr2_1:36868376-36868395 Msa0206830:CDS 25.0%
!!! AATTTTGATCATTTTCGTTG+GGG + chr2_1:36868377-36868396 Msa0206830:CDS 25.0%
!!! AATTGAAATGAGTGTTGAAA+CGG + chr2_1:36868464-36868483 Msa0206830:CDS 25.0%
! AAAAAGAGACAAAAAGCAAA+CGG - chr2_1:36868615-36868634 None:intergenic 25.0%
! TCAACAATATTTGATATTGG+AGG + chr2_1:36868876-36868895 Msa0206830:CDS 25.0%
! AATCATATCAGAAATGAAAC+CGG - chr2_1:36868922-36868941 None:intergenic 25.0%
! TAATAAGAACACATATTTGG+TGG - chr2_1:36867828-36867847 None:intergenic 25.0%
!! AGAACACTTTTAACAATACT+AGG - chr2_1:36867895-36867914 None:intergenic 25.0%
!!! TAGTATTGTTAAAAGTGTTC+TGG + chr2_1:36867894-36867913 Msa0206830:CDS 25.0%
!!! AGTATTGTTAAAAGTGTTCT+GGG + chr2_1:36867895-36867914 Msa0206830:CDS 25.0%
!!! GGTTTTTTTACGATACTTTT+TGG + chr2_1:36868108-36868127 Msa0206830:CDS 25.0%
!!! GAATTTTGATCATTTTCGTT+GGG + chr2_1:36868376-36868395 Msa0206830:CDS 25.0%
!!! AATTTTGATCATTTTCGTTG+GGG + chr2_1:36868377-36868396 Msa0206830:CDS 25.0%
!!! AATTGAAATGAGTGTTGAAA+CGG + chr2_1:36868464-36868483 Msa0206830:CDS 25.0%
! AAAAAGAGACAAAAAGCAAA+CGG - chr2_1:36868615-36868634 None:intergenic 25.0%
! TCAACAATATTTGATATTGG+AGG + chr2_1:36868876-36868895 Msa0206830:CDS 25.0%
! AATCATATCAGAAATGAAAC+CGG - chr2_1:36868922-36868941 None:intergenic 25.0%
AAAAAAAAAACACCTTTGCG+TGG - chr2_1:36867542-36867561 None:intergenic 30.0%
!! TCTTAAATGGTGATGGAAAT+TGG - chr2_1:36867593-36867612 None:intergenic 30.0%
! TTCCATCACCATTTAAGATT+TGG + chr2_1:36867595-36867614 Msa0206830:five_prime_UTR 30.0%
! CGTGTTTTCATCTTCAATTT+TGG + chr2_1:36867637-36867656 Msa0206830:five_prime_UTR 30.0%
! ACATATTTGGTGGAATAGTA+GGG - chr2_1:36867818-36867837 None:intergenic 30.0%
! ACACTTTTAACAATACTAGG+AGG - chr2_1:36867892-36867911 None:intergenic 30.0%
TTTCTTACTTCTTACTCCAT+TGG + chr2_1:36868012-36868031 Msa0206830:CDS 30.0%
!!! TTTACGATACTTTTTGGGTT+AGG + chr2_1:36868114-36868133 Msa0206830:CDS 30.0%
ACGAAAATGATCAAAATTCC+AGG - chr2_1:36868375-36868394 None:intergenic 30.0%
!! GGAATTTTGATCATTTTCGT+TGG + chr2_1:36868375-36868394 Msa0206830:CDS 30.0%
!! ATTGAAATGAGTGTTGAAAC+GGG + chr2_1:36868465-36868484 Msa0206830:CDS 30.0%
! GAATTTGAAATCGAACTATC+AGG - chr2_1:36868543-36868562 None:intergenic 30.0%
TTGCTTACACTTTCTTGTAT+TGG + chr2_1:36868646-36868665 Msa0206830:CDS 30.0%
AAATCCAGAAAGAAACATCA+AGG - chr2_1:36869045-36869064 None:intergenic 30.0%
! GATGTTTCTTTCTGGATTTT+TGG + chr2_1:36869046-36869065 Msa0206830:CDS 30.0%
CACAGATTTGATTATAGTCT+AGG + chr2_1:36869365-36869384 Msa0206830:three_prime_UTR 30.0%
AAAAAAAAAACACCTTTGCG+TGG - chr2_1:36867542-36867561 None:intergenic 30.0%
!! TCTTAAATGGTGATGGAAAT+TGG - chr2_1:36867593-36867612 None:intergenic 30.0%
! TTCCATCACCATTTAAGATT+TGG + chr2_1:36867595-36867614 Msa0206830:five_prime_UTR 30.0%
! CGTGTTTTCATCTTCAATTT+TGG + chr2_1:36867637-36867656 Msa0206830:five_prime_UTR 30.0%
! ACATATTTGGTGGAATAGTA+GGG - chr2_1:36867818-36867837 None:intergenic 30.0%
! ACACTTTTAACAATACTAGG+AGG - chr2_1:36867892-36867911 None:intergenic 30.0%
TTTCTTACTTCTTACTCCAT+TGG + chr2_1:36868012-36868031 Msa0206830:CDS 30.0%
!!! TTTACGATACTTTTTGGGTT+AGG + chr2_1:36868114-36868133 Msa0206830:CDS 30.0%
ACGAAAATGATCAAAATTCC+AGG - chr2_1:36868375-36868394 None:intergenic 30.0%
!! GGAATTTTGATCATTTTCGT+TGG + chr2_1:36868375-36868394 Msa0206830:CDS 30.0%
!! ATTGAAATGAGTGTTGAAAC+GGG + chr2_1:36868465-36868484 Msa0206830:CDS 30.0%
! GAATTTGAAATCGAACTATC+AGG - chr2_1:36868543-36868562 None:intergenic 30.0%
TTGCTTACACTTTCTTGTAT+TGG + chr2_1:36868646-36868665 Msa0206830:CDS 30.0%
AAATCCAGAAAGAAACATCA+AGG - chr2_1:36869045-36869064 None:intergenic 30.0%
! GATGTTTCTTTCTGGATTTT+TGG + chr2_1:36869046-36869065 Msa0206830:CDS 30.0%
CACAGATTTGATTATAGTCT+AGG + chr2_1:36869365-36869384 Msa0206830:three_prime_UTR 30.0%
CACCAAATCTTAAATGGTGA+TGG - chr2_1:36867600-36867619 None:intergenic 35.0%
TGTTGGCACCAAATCTTAAA+TGG - chr2_1:36867606-36867625 None:intergenic 35.0%
AACACGACTTACAAGATTGT+TGG - chr2_1:36867623-36867642 None:intergenic 35.0%
TGAATCCTGATGAGTAAGAA+TGG + chr2_1:36867720-36867739 Msa0206830:exon 35.0%
TGATTCCATTCTTACTCATC+AGG - chr2_1:36867728-36867747 None:intergenic 35.0%
! CACATATTTGGTGGAATAGT+AGG - chr2_1:36867819-36867838 None:intergenic 35.0%
AACCAATTCAACCCTTGATT+CGG + chr2_1:36867930-36867949 Msa0206830:CDS 35.0%
TTACTCCATTGGCATGTATT+TGG + chr2_1:36868023-36868042 Msa0206830:CDS 35.0%
!! TTGGTGATAGGATTGATTTG+AGG + chr2_1:36868055-36868074 Msa0206830:CDS 35.0%
!! TTGAGGTTGTTTCTTGTGTT+TGG + chr2_1:36868072-36868091 Msa0206830:CDS 35.0%
!! TGAGGTTGTTTCTTGTGTTT+GGG + chr2_1:36868073-36868092 Msa0206830:CDS 35.0%
!!! TACTTTTTGGGTTAGGATAC+TGG + chr2_1:36868121-36868140 Msa0206830:CDS 35.0%
TGGTTTGATGTTCATGTGTT+GGG + chr2_1:36868141-36868160 Msa0206830:CDS 35.0%
ATCAAAGAGGGGATTGATAA+TGG + chr2_1:36868254-36868273 Msa0206830:CDS 35.0%
! TCAAAGAGGGGATTGATAAT+GGG + chr2_1:36868255-36868274 Msa0206830:CDS 35.0%
!! CATTGGTTCAGTTATTGCTT+CGG + chr2_1:36868311-36868330 Msa0206830:CDS 35.0%
! ATTGGTTCAGTTATTGCTTC+GGG + chr2_1:36868312-36868331 Msa0206830:CDS 35.0%
CTCATTTCAATTTCCATTCC+AGG - chr2_1:36868456-36868475 None:intergenic 35.0%
TCAAATTCTTCGTCTGCTAT+TGG + chr2_1:36868555-36868574 Msa0206830:CDS 35.0%
!! GTCTGCTATTGGATTTTTAG+AGG + chr2_1:36868566-36868585 Msa0206830:CDS 35.0%
ATTGGTTACCCTTCTACATA+AGG + chr2_1:36868664-36868683 Msa0206830:CDS 35.0%
!!! TTATTTTGTGTTGGTTGCAG+CGG + chr2_1:36868812-36868831 Msa0206830:intron 35.0%
AATCTATCTCACAAAACTGC+TGG + chr2_1:36868846-36868865 Msa0206830:CDS 35.0%
ATCTATCTCACAAAACTGCT+GGG + chr2_1:36868847-36868866 Msa0206830:CDS 35.0%
TTTGATATTGGAGGAGTTCT+AGG + chr2_1:36868885-36868904 Msa0206830:CDS 35.0%
GAATCGATAGAAACAAGAAC+AGG - chr2_1:36868968-36868987 None:intergenic 35.0%
ATCACCTTGATGTTTCTTTC+TGG + chr2_1:36869038-36869057 Msa0206830:CDS 35.0%
!!! CTTTCTGGATTTTTGGTGAA+TGG + chr2_1:36869053-36869072 Msa0206830:CDS 35.0%
ACTGTTACTGCAATCATTGA+TGG + chr2_1:36869158-36869177 Msa0206830:CDS 35.0%
GAAACATAACCTGCTAAAAG+TGG - chr2_1:36869212-36869231 None:intergenic 35.0%
TAGCAGGTTATGTTTCAACT+AGG + chr2_1:36869216-36869235 Msa0206830:CDS 35.0%
AGCAGGTTATGTTTCAACTA+GGG + chr2_1:36869217-36869236 Msa0206830:CDS 35.0%
! GTTTCGTCTATTTTCTTTGC+TGG + chr2_1:36869266-36869285 Msa0206830:CDS 35.0%
!! TATTCTTGATTCGAGTTGCA+AGG + chr2_1:36869291-36869310 Msa0206830:CDS 35.0%
! GAGATAAGAGAGAAGTTTTC+AGG + chr2_1:36869317-36869336 Msa0206830:CDS 35.0%
CACCAAATCTTAAATGGTGA+TGG - chr2_1:36867600-36867619 None:intergenic 35.0%
TGTTGGCACCAAATCTTAAA+TGG - chr2_1:36867606-36867625 None:intergenic 35.0%
AACACGACTTACAAGATTGT+TGG - chr2_1:36867623-36867642 None:intergenic 35.0%
TGAATCCTGATGAGTAAGAA+TGG + chr2_1:36867720-36867739 Msa0206830:exon 35.0%
TGATTCCATTCTTACTCATC+AGG - chr2_1:36867728-36867747 None:intergenic 35.0%
! CACATATTTGGTGGAATAGT+AGG - chr2_1:36867819-36867838 None:intergenic 35.0%
AACCAATTCAACCCTTGATT+CGG + chr2_1:36867930-36867949 Msa0206830:CDS 35.0%
TTACTCCATTGGCATGTATT+TGG + chr2_1:36868023-36868042 Msa0206830:CDS 35.0%
!! TTGGTGATAGGATTGATTTG+AGG + chr2_1:36868055-36868074 Msa0206830:CDS 35.0%
!! TTGAGGTTGTTTCTTGTGTT+TGG + chr2_1:36868072-36868091 Msa0206830:CDS 35.0%
!! TGAGGTTGTTTCTTGTGTTT+GGG + chr2_1:36868073-36868092 Msa0206830:CDS 35.0%
!!! TACTTTTTGGGTTAGGATAC+TGG + chr2_1:36868121-36868140 Msa0206830:CDS 35.0%
TGGTTTGATGTTCATGTGTT+GGG + chr2_1:36868141-36868160 Msa0206830:CDS 35.0%
ATCAAAGAGGGGATTGATAA+TGG + chr2_1:36868254-36868273 Msa0206830:CDS 35.0%
! TCAAAGAGGGGATTGATAAT+GGG + chr2_1:36868255-36868274 Msa0206830:CDS 35.0%
!! CATTGGTTCAGTTATTGCTT+CGG + chr2_1:36868311-36868330 Msa0206830:CDS 35.0%
! ATTGGTTCAGTTATTGCTTC+GGG + chr2_1:36868312-36868331 Msa0206830:CDS 35.0%
CTCATTTCAATTTCCATTCC+AGG - chr2_1:36868456-36868475 None:intergenic 35.0%
TCAAATTCTTCGTCTGCTAT+TGG + chr2_1:36868555-36868574 Msa0206830:CDS 35.0%
!! GTCTGCTATTGGATTTTTAG+AGG + chr2_1:36868566-36868585 Msa0206830:CDS 35.0%
ATTGGTTACCCTTCTACATA+AGG + chr2_1:36868664-36868683 Msa0206830:CDS 35.0%
!!! TTATTTTGTGTTGGTTGCAG+CGG + chr2_1:36868812-36868831 Msa0206830:intron 35.0%
AATCTATCTCACAAAACTGC+TGG + chr2_1:36868846-36868865 Msa0206830:CDS 35.0%
ATCTATCTCACAAAACTGCT+GGG + chr2_1:36868847-36868866 Msa0206830:CDS 35.0%
TTTGATATTGGAGGAGTTCT+AGG + chr2_1:36868885-36868904 Msa0206830:CDS 35.0%
GAATCGATAGAAACAAGAAC+AGG - chr2_1:36868968-36868987 None:intergenic 35.0%
ATCACCTTGATGTTTCTTTC+TGG + chr2_1:36869038-36869057 Msa0206830:CDS 35.0%
!!! CTTTCTGGATTTTTGGTGAA+TGG + chr2_1:36869053-36869072 Msa0206830:CDS 35.0%
ACTGTTACTGCAATCATTGA+TGG + chr2_1:36869158-36869177 Msa0206830:CDS 35.0%
GAAACATAACCTGCTAAAAG+TGG - chr2_1:36869212-36869231 None:intergenic 35.0%
TAGCAGGTTATGTTTCAACT+AGG + chr2_1:36869216-36869235 Msa0206830:CDS 35.0%
AGCAGGTTATGTTTCAACTA+GGG + chr2_1:36869217-36869236 Msa0206830:CDS 35.0%
! GTTTCGTCTATTTTCTTTGC+TGG + chr2_1:36869266-36869285 Msa0206830:CDS 35.0%
!! TATTCTTGATTCGAGTTGCA+AGG + chr2_1:36869291-36869310 Msa0206830:CDS 35.0%
! GAGATAAGAGAGAAGTTTTC+AGG + chr2_1:36869317-36869336 Msa0206830:CDS 35.0%
TTTGGAAAGAGATTCAGAGC+TGG - chr2_1:36867775-36867794 None:intergenic 40.0%
!! AATAGTAGGGTTTTGTGAGG+GGG - chr2_1:36867805-36867824 None:intergenic 40.0%
!! GAATAGTAGGGTTTTGTGAG+GGG - chr2_1:36867806-36867825 None:intergenic 40.0%
!! GGAATAGTAGGGTTTTGTGA+GGG - chr2_1:36867807-36867826 None:intergenic 40.0%
!! TGGAATAGTAGGGTTTTGTG+AGG - chr2_1:36867808-36867827 None:intergenic 40.0%
ATGCTTCCTTTCATGCATCT+AGG + chr2_1:36867863-36867882 Msa0206830:CDS 40.0%
GTTGAATTGGTTGGAACTGT+GGG - chr2_1:36867922-36867941 None:intergenic 40.0%
GAATCAAGGGTTGAATTGGT+TGG - chr2_1:36867931-36867950 None:intergenic 40.0%
ACCAATTCAACCCTTGATTC+GGG + chr2_1:36867931-36867950 Msa0206830:CDS 40.0%
! ATGTATTTGGCTGGTCATGT+TGG + chr2_1:36868036-36868055 Msa0206830:CDS 40.0%
!! GTTGTTTCTTGTGTTTGGGA+TGG + chr2_1:36868077-36868096 Msa0206830:CDS 40.0%
! TTTCTTGTGTTTGGGATGGT+GGG + chr2_1:36868081-36868100 Msa0206830:CDS 40.0%
! CTGGTTTGATGTTCATGTGT+TGG + chr2_1:36868140-36868159 Msa0206830:CDS 40.0%
GGTTTGATGTTCATGTGTTG+GGG + chr2_1:36868142-36868161 Msa0206830:CDS 40.0%
!!! CATGTGTTGGGGTTTTTTGT+CGG + chr2_1:36868153-36868172 Msa0206830:CDS 40.0%
! TGTGGAGTGTTTCAGTCAAT+TGG + chr2_1:36868189-36868208 Msa0206830:CDS 40.0%
! GTGGAGTGTTTCAGTCAATT+GGG + chr2_1:36868190-36868209 Msa0206830:CDS 40.0%
! CTTGTGTTGTTGCAGTTGTT+GGG + chr2_1:36868217-36868236 Msa0206830:CDS 40.0%
TTGTTGCAGTTGTTGGGAAT+TGG + chr2_1:36868223-36868242 Msa0206830:CDS 40.0%
!! CAAAGAGGGGATTGATAATG+GGG + chr2_1:36868256-36868275 Msa0206830:CDS 40.0%
GATATGGAATTCGCATACCT+CGG + chr2_1:36868278-36868297 Msa0206830:CDS 40.0%
! AGTTATTGCTTCGGGTGTTT+TGG + chr2_1:36868320-36868339 Msa0206830:CDS 40.0%
!!! GGGTGTTTTGGAATTTGGAT+GGG + chr2_1:36868332-36868351 Msa0206830:CDS 40.0%
!!! GGTGTTTTGGAATTTGGATG+GGG + chr2_1:36868333-36868352 Msa0206830:CDS 40.0%
!!! TTTTGGAATTTGGATGGGGT+TGG + chr2_1:36868337-36868356 Msa0206830:CDS 40.0%
! GATCATTTTCGTTGGGGTTT+TGG + chr2_1:36868383-36868402 Msa0206830:CDS 40.0%
TTGTGAATCCCGTGGATATA+GGG + chr2_1:36868421-36868440 Msa0206830:CDS 40.0%
!! CTATTGGATTTTTAGAGGCG+TGG + chr2_1:36868571-36868590 Msa0206830:CDS 40.0%
CATATCAGAAATGAAACCGG+CGG - chr2_1:36868919-36868938 None:intergenic 40.0%
!! CTGCTTTTGTATCGTGCTTT+CGG + chr2_1:36868993-36869012 Msa0206830:CDS 40.0%
! TGCTTTTGTATCGTGCTTTC+GGG + chr2_1:36868994-36869013 Msa0206830:CDS 40.0%
GCAGTTGTAATTAGCGAGTA+CGG - chr2_1:36869080-36869099 None:intergenic 40.0%
! ACTGCAATCATTGATGGTAC+TGG + chr2_1:36869164-36869183 Msa0206830:CDS 40.0%
!! ATTGATGGTACTGGTTCTGT+TGG + chr2_1:36869173-36869192 Msa0206830:CDS 40.0%
GCAGGTTATGTTTCAACTAG+GGG + chr2_1:36869218-36869237 Msa0206830:CDS 40.0%
GTTATGTTTCAACTAGGGGA+TGG + chr2_1:36869222-36869241 Msa0206830:CDS 40.0%
TTTGGAAAGAGATTCAGAGC+TGG - chr2_1:36867775-36867794 None:intergenic 40.0%
!! AATAGTAGGGTTTTGTGAGG+GGG - chr2_1:36867805-36867824 None:intergenic 40.0%
!! GAATAGTAGGGTTTTGTGAG+GGG - chr2_1:36867806-36867825 None:intergenic 40.0%
!! GGAATAGTAGGGTTTTGTGA+GGG - chr2_1:36867807-36867826 None:intergenic 40.0%
!! TGGAATAGTAGGGTTTTGTG+AGG - chr2_1:36867808-36867827 None:intergenic 40.0%
ATGCTTCCTTTCATGCATCT+AGG + chr2_1:36867863-36867882 Msa0206830:CDS 40.0%
GTTGAATTGGTTGGAACTGT+GGG - chr2_1:36867922-36867941 None:intergenic 40.0%
GAATCAAGGGTTGAATTGGT+TGG - chr2_1:36867931-36867950 None:intergenic 40.0%
ACCAATTCAACCCTTGATTC+GGG + chr2_1:36867931-36867950 Msa0206830:CDS 40.0%
! ATGTATTTGGCTGGTCATGT+TGG + chr2_1:36868036-36868055 Msa0206830:CDS 40.0%
!! GTTGTTTCTTGTGTTTGGGA+TGG + chr2_1:36868077-36868096 Msa0206830:CDS 40.0%
! TTTCTTGTGTTTGGGATGGT+GGG + chr2_1:36868081-36868100 Msa0206830:CDS 40.0%
! CTGGTTTGATGTTCATGTGT+TGG + chr2_1:36868140-36868159 Msa0206830:CDS 40.0%
GGTTTGATGTTCATGTGTTG+GGG + chr2_1:36868142-36868161 Msa0206830:CDS 40.0%
!!! CATGTGTTGGGGTTTTTTGT+CGG + chr2_1:36868153-36868172 Msa0206830:CDS 40.0%
! TGTGGAGTGTTTCAGTCAAT+TGG + chr2_1:36868189-36868208 Msa0206830:CDS 40.0%
! GTGGAGTGTTTCAGTCAATT+GGG + chr2_1:36868190-36868209 Msa0206830:CDS 40.0%
! CTTGTGTTGTTGCAGTTGTT+GGG + chr2_1:36868217-36868236 Msa0206830:CDS 40.0%
TTGTTGCAGTTGTTGGGAAT+TGG + chr2_1:36868223-36868242 Msa0206830:CDS 40.0%
!! CAAAGAGGGGATTGATAATG+GGG + chr2_1:36868256-36868275 Msa0206830:CDS 40.0%
GATATGGAATTCGCATACCT+CGG + chr2_1:36868278-36868297 Msa0206830:CDS 40.0%
! AGTTATTGCTTCGGGTGTTT+TGG + chr2_1:36868320-36868339 Msa0206830:CDS 40.0%
!!! GGGTGTTTTGGAATTTGGAT+GGG + chr2_1:36868332-36868351 Msa0206830:CDS 40.0%
!!! GGTGTTTTGGAATTTGGATG+GGG + chr2_1:36868333-36868352 Msa0206830:CDS 40.0%
!!! TTTTGGAATTTGGATGGGGT+TGG + chr2_1:36868337-36868356 Msa0206830:CDS 40.0%
! GATCATTTTCGTTGGGGTTT+TGG + chr2_1:36868383-36868402 Msa0206830:CDS 40.0%
TTGTGAATCCCGTGGATATA+GGG + chr2_1:36868421-36868440 Msa0206830:CDS 40.0%
!! CTATTGGATTTTTAGAGGCG+TGG + chr2_1:36868571-36868590 Msa0206830:CDS 40.0%
CATATCAGAAATGAAACCGG+CGG - chr2_1:36868919-36868938 None:intergenic 40.0%
!! CTGCTTTTGTATCGTGCTTT+CGG + chr2_1:36868993-36869012 Msa0206830:CDS 40.0%
! TGCTTTTGTATCGTGCTTTC+GGG + chr2_1:36868994-36869013 Msa0206830:CDS 40.0%
GCAGTTGTAATTAGCGAGTA+CGG - chr2_1:36869080-36869099 None:intergenic 40.0%
! ACTGCAATCATTGATGGTAC+TGG + chr2_1:36869164-36869183 Msa0206830:CDS 40.0%
!! ATTGATGGTACTGGTTCTGT+TGG + chr2_1:36869173-36869192 Msa0206830:CDS 40.0%
GCAGGTTATGTTTCAACTAG+GGG + chr2_1:36869218-36869237 Msa0206830:CDS 40.0%
GTTATGTTTCAACTAGGGGA+TGG + chr2_1:36869222-36869241 Msa0206830:CDS 40.0%
AAACCGGGTTGTGTTCAGAT+CGG - chr2_1:36867518-36867537 None:intergenic 45.0%
AACACCTTTGCGTGGAAAAC+CGG - chr2_1:36867534-36867553 None:intergenic 45.0%
GAAATTGGTGAGAGCAAGAG+AGG - chr2_1:36867578-36867597 None:intergenic 45.0%
AGGCTTCCTAGATGCATGAA+AGG - chr2_1:36867872-36867891 None:intergenic 45.0%
GGTTGAATTGGTTGGAACTG+TGG - chr2_1:36867923-36867942 None:intergenic 45.0%
ACCCGAATCAAGGGTTGAAT+TGG - chr2_1:36867935-36867954 None:intergenic 45.0%
!! ATTCAACCCTTGATTCGGGT+TGG + chr2_1:36867935-36867954 Msa0206830:CDS 45.0%
! GGCCACCTTTTAATGGAACT+CGG + chr2_1:36867956-36867975 Msa0206830:CDS 45.0%
! GCCACCTTTTAATGGAACTC+GGG + chr2_1:36867957-36867976 Msa0206830:CDS 45.0%
! CCACCTTTTAATGGAACTCG+GGG + chr2_1:36867958-36867977 Msa0206830:CDS 45.0%
GTTCCCCGAGTTCCATTAAA+AGG - chr2_1:36867964-36867983 None:intergenic 45.0%
TCCATTGGCATGTATTTGGC+TGG + chr2_1:36868027-36868046 Msa0206830:CDS 45.0%
ACCAGCCAAATACATGCCAA+TGG - chr2_1:36868031-36868050 None:intergenic 45.0%
! GTTTCTTGTGTTTGGGATGG+TGG + chr2_1:36868080-36868099 Msa0206830:CDS 45.0%
! GTCGGTGTTCAGATTGTTTG+TGG + chr2_1:36868171-36868190 Msa0206830:CDS 45.0%
GAGTGTTTCAGTCAATTGGG+TGG + chr2_1:36868193-36868212 Msa0206830:CDS 45.0%
CCAACAACTGCAACAACACA+AGG - chr2_1:36868219-36868238 None:intergenic 45.0%
! CCTTGTGTTGTTGCAGTTGT+TGG + chr2_1:36868216-36868235 Msa0206830:CDS 45.0%
! CAGTTGTTGGGAATTGGCTT+GGG + chr2_1:36868229-36868248 Msa0206830:CDS 45.0%
!! AGTTGTTGGGAATTGGCTTG+GGG + chr2_1:36868230-36868249 Msa0206830:CDS 45.0%
!! ATTGGCTTGGGGAATCAAAG+AGG + chr2_1:36868241-36868260 Msa0206830:CDS 45.0%
!! TTGGCTTGGGGAATCAAAGA+GGG + chr2_1:36868242-36868261 Msa0206830:CDS 45.0%
!! GGGGATTGATAATGGGGATA+TGG + chr2_1:36868262-36868281 Msa0206830:CDS 45.0%
ACCTCGGTTGGGAATATCAT+TGG + chr2_1:36868294-36868313 Msa0206830:CDS 45.0%
ACCAATGATATTCCCAACCG+AGG - chr2_1:36868298-36868317 None:intergenic 45.0%
!!! GCTTCGGGTGTTTTGGAATT+TGG + chr2_1:36868327-36868346 Msa0206830:CDS 45.0%
!!! CGGGTGTTTTGGAATTTGGA+TGG + chr2_1:36868331-36868350 Msa0206830:CDS 45.0%
! GTTTCTTGTTGTGAATCCCG+TGG + chr2_1:36868413-36868432 Msa0206830:CDS 45.0%
GTTGTGAATCCCGTGGATAT+AGG + chr2_1:36868420-36868439 Msa0206830:CDS 45.0%
ACTCGCAAACCCTATATCCA+CGG - chr2_1:36868433-36868452 None:intergenic 45.0%
!! GAAATGAGTGTTGAAACGGG+CGG + chr2_1:36868468-36868487 Msa0206830:CDS 45.0%
TCTGCAGAAAGTCGAATCAG+AGG + chr2_1:36868500-36868519 Msa0206830:CDS 45.0%
! TTAGAGGCGTGGAAAATACC+TGG + chr2_1:36868582-36868601 Msa0206830:CDS 45.0%
CCTGTGTGCCTTATGTAGAA+GGG - chr2_1:36868675-36868694 None:intergenic 45.0%
ACCTGTGTGCCTTATGTAGA+AGG - chr2_1:36868676-36868695 None:intergenic 45.0%
!! GATATTGGAGGAGTTCTAGG+CGG + chr2_1:36868888-36868907 Msa0206830:CDS 45.0%
CTCGCTAATTACAACTGCTG+TGG + chr2_1:36869082-36869101 Msa0206830:CDS 45.0%
! GCTTTAGTGGTGGGAATTCT+CGG + chr2_1:36869126-36869145 Msa0206830:CDS 45.0%
! CTTTAGTGGTGGGAATTCTC+GGG + chr2_1:36869127-36869146 Msa0206830:CDS 45.0%
AAACCGGGTTGTGTTCAGAT+CGG - chr2_1:36867518-36867537 None:intergenic 45.0%
AACACCTTTGCGTGGAAAAC+CGG - chr2_1:36867534-36867553 None:intergenic 45.0%
GAAATTGGTGAGAGCAAGAG+AGG - chr2_1:36867578-36867597 None:intergenic 45.0%
AGGCTTCCTAGATGCATGAA+AGG - chr2_1:36867872-36867891 None:intergenic 45.0%
GGTTGAATTGGTTGGAACTG+TGG - chr2_1:36867923-36867942 None:intergenic 45.0%
ACCCGAATCAAGGGTTGAAT+TGG - chr2_1:36867935-36867954 None:intergenic 45.0%
!! ATTCAACCCTTGATTCGGGT+TGG + chr2_1:36867935-36867954 Msa0206830:CDS 45.0%
! GGCCACCTTTTAATGGAACT+CGG + chr2_1:36867956-36867975 Msa0206830:CDS 45.0%
! GCCACCTTTTAATGGAACTC+GGG + chr2_1:36867957-36867976 Msa0206830:CDS 45.0%
! CCACCTTTTAATGGAACTCG+GGG + chr2_1:36867958-36867977 Msa0206830:CDS 45.0%
GTTCCCCGAGTTCCATTAAA+AGG - chr2_1:36867964-36867983 None:intergenic 45.0%
TCCATTGGCATGTATTTGGC+TGG + chr2_1:36868027-36868046 Msa0206830:CDS 45.0%
ACCAGCCAAATACATGCCAA+TGG - chr2_1:36868031-36868050 None:intergenic 45.0%
! GTTTCTTGTGTTTGGGATGG+TGG + chr2_1:36868080-36868099 Msa0206830:CDS 45.0%
! GTCGGTGTTCAGATTGTTTG+TGG + chr2_1:36868171-36868190 Msa0206830:CDS 45.0%
GAGTGTTTCAGTCAATTGGG+TGG + chr2_1:36868193-36868212 Msa0206830:CDS 45.0%
CCAACAACTGCAACAACACA+AGG - chr2_1:36868219-36868238 None:intergenic 45.0%
! CCTTGTGTTGTTGCAGTTGT+TGG + chr2_1:36868216-36868235 Msa0206830:CDS 45.0%
! CAGTTGTTGGGAATTGGCTT+GGG + chr2_1:36868229-36868248 Msa0206830:CDS 45.0%
!! AGTTGTTGGGAATTGGCTTG+GGG + chr2_1:36868230-36868249 Msa0206830:CDS 45.0%
!! ATTGGCTTGGGGAATCAAAG+AGG + chr2_1:36868241-36868260 Msa0206830:CDS 45.0%
!! TTGGCTTGGGGAATCAAAGA+GGG + chr2_1:36868242-36868261 Msa0206830:CDS 45.0%
!! GGGGATTGATAATGGGGATA+TGG + chr2_1:36868262-36868281 Msa0206830:CDS 45.0%
ACCTCGGTTGGGAATATCAT+TGG + chr2_1:36868294-36868313 Msa0206830:CDS 45.0%
ACCAATGATATTCCCAACCG+AGG - chr2_1:36868298-36868317 None:intergenic 45.0%
!!! GCTTCGGGTGTTTTGGAATT+TGG + chr2_1:36868327-36868346 Msa0206830:CDS 45.0%
!!! CGGGTGTTTTGGAATTTGGA+TGG + chr2_1:36868331-36868350 Msa0206830:CDS 45.0%
! GTTTCTTGTTGTGAATCCCG+TGG + chr2_1:36868413-36868432 Msa0206830:CDS 45.0%
GTTGTGAATCCCGTGGATAT+AGG + chr2_1:36868420-36868439 Msa0206830:CDS 45.0%
ACTCGCAAACCCTATATCCA+CGG - chr2_1:36868433-36868452 None:intergenic 45.0%
!! GAAATGAGTGTTGAAACGGG+CGG + chr2_1:36868468-36868487 Msa0206830:CDS 45.0%
TCTGCAGAAAGTCGAATCAG+AGG + chr2_1:36868500-36868519 Msa0206830:CDS 45.0%
! TTAGAGGCGTGGAAAATACC+TGG + chr2_1:36868582-36868601 Msa0206830:CDS 45.0%
CCTGTGTGCCTTATGTAGAA+GGG - chr2_1:36868675-36868694 None:intergenic 45.0%
ACCTGTGTGCCTTATGTAGA+AGG - chr2_1:36868676-36868695 None:intergenic 45.0%
!! GATATTGGAGGAGTTCTAGG+CGG + chr2_1:36868888-36868907 Msa0206830:CDS 45.0%
CTCGCTAATTACAACTGCTG+TGG + chr2_1:36869082-36869101 Msa0206830:CDS 45.0%
! GCTTTAGTGGTGGGAATTCT+CGG + chr2_1:36869126-36869145 Msa0206830:CDS 45.0%
! CTTTAGTGGTGGGAATTCTC+GGG + chr2_1:36869127-36869146 Msa0206830:CDS 45.0%
AACCGGGTTGTGTTCAGATC+GGG - chr2_1:36867517-36867536 None:intergenic 50.0%
ACACCTTTGCGTGGAAAACC+GGG - chr2_1:36867533-36867552 None:intergenic 50.0%
TGGAGCTAGGCTCAAACTCT+TGG - chr2_1:36867755-36867774 None:intergenic 50.0%
AGAGATTCAGAGCTGGAGCT+AGG - chr2_1:36867768-36867787 None:intergenic 50.0%
!! TTGTGAGGGGGTTTCAGGTT+TGG - chr2_1:36867793-36867812 None:intergenic 50.0%
!!! TCGGGTTGGCCACCTTTTAA+TGG + chr2_1:36867949-36867968 Msa0206830:CDS 50.0%
CCCCGAGTTCCATTAAAAGG+TGG - chr2_1:36867961-36867980 None:intergenic 50.0%
!! TGGCTGGTCATGTTGGTGAT+AGG + chr2_1:36868043-36868062 Msa0206830:CDS 50.0%
GCAGTTGTTGGGAATTGGCT+TGG + chr2_1:36868228-36868247 Msa0206830:CDS 50.0%
! TGGCTTGGGGAATCAAAGAG+GGG + chr2_1:36868243-36868262 Msa0206830:CDS 50.0%
TGGAATTCGCATACCTCGGT+TGG + chr2_1:36868282-36868301 Msa0206830:CDS 50.0%
GGAATTCGCATACCTCGGTT+GGG + chr2_1:36868283-36868302 Msa0206830:CDS 50.0%
CTCGCAAACCCTATATCCAC+GGG - chr2_1:36868432-36868451 None:intergenic 50.0%
GATATAGGGTTTGCGAGTCC+TGG + chr2_1:36868435-36868454 Msa0206830:CDS 50.0%
CCCTTCTACATAAGGCACAC+AGG + chr2_1:36868672-36868691 Msa0206830:CDS 50.0%
GCACGATACAAAAGCAGAGC+TGG - chr2_1:36868990-36869009 None:intergenic 50.0%
!! GCTCTTGGACCACTTTTAGC+AGG + chr2_1:36869200-36869219 Msa0206830:CDS 50.0%
AACCGGGTTGTGTTCAGATC+GGG - chr2_1:36867517-36867536 None:intergenic 50.0%
ACACCTTTGCGTGGAAAACC+GGG - chr2_1:36867533-36867552 None:intergenic 50.0%
TGGAGCTAGGCTCAAACTCT+TGG - chr2_1:36867755-36867774 None:intergenic 50.0%
AGAGATTCAGAGCTGGAGCT+AGG - chr2_1:36867768-36867787 None:intergenic 50.0%
!! TTGTGAGGGGGTTTCAGGTT+TGG - chr2_1:36867793-36867812 None:intergenic 50.0%
!!! TCGGGTTGGCCACCTTTTAA+TGG + chr2_1:36867949-36867968 Msa0206830:CDS 50.0%
CCCCGAGTTCCATTAAAAGG+TGG - chr2_1:36867961-36867980 None:intergenic 50.0%
!! TGGCTGGTCATGTTGGTGAT+AGG + chr2_1:36868043-36868062 Msa0206830:CDS 50.0%
GCAGTTGTTGGGAATTGGCT+TGG + chr2_1:36868228-36868247 Msa0206830:CDS 50.0%
! TGGCTTGGGGAATCAAAGAG+GGG + chr2_1:36868243-36868262 Msa0206830:CDS 50.0%
TGGAATTCGCATACCTCGGT+TGG + chr2_1:36868282-36868301 Msa0206830:CDS 50.0%
GGAATTCGCATACCTCGGTT+GGG + chr2_1:36868283-36868302 Msa0206830:CDS 50.0%
CTCGCAAACCCTATATCCAC+GGG - chr2_1:36868432-36868451 None:intergenic 50.0%
GATATAGGGTTTGCGAGTCC+TGG + chr2_1:36868435-36868454 Msa0206830:CDS 50.0%
CCCTTCTACATAAGGCACAC+AGG + chr2_1:36868672-36868691 Msa0206830:CDS 50.0%
GCACGATACAAAAGCAGAGC+TGG - chr2_1:36868990-36869009 None:intergenic 50.0%
!! GCTCTTGGACCACTTTTAGC+AGG + chr2_1:36869200-36869219 Msa0206830:CDS 50.0%
AGCCCGATCTGAACACAACC+CGG + chr2_1:36867512-36867531 Msa0206830:five_prime_UTR 55.0%
! CAACCCGGTTTTCCACGCAA+AGG + chr2_1:36867527-36867546 Msa0206830:five_prime_UTR 55.0%
!! GGGTTTTGTGAGGGGGTTTC+AGG - chr2_1:36867798-36867817 None:intergenic 55.0%
AGGTGGCCAACCCGAATCAA+GGG - chr2_1:36867944-36867963 None:intergenic 55.0%
AAGGTGGCCAACCCGAATCA+AGG - chr2_1:36867945-36867964 None:intergenic 55.0%
ATGGAACTCGGGGAACTCAC+CGG + chr2_1:36867968-36867987 Msa0206830:CDS 55.0%
!! TGGATGGGGTTGGTCGTTTG+TGG + chr2_1:36868347-36868366 Msa0206830:CDS 55.0%
AGGGTTTGCGAGTCCTGGAA+TGG + chr2_1:36868440-36868459 Msa0206830:CDS 55.0%
AAAGCAAACGGAGCGACTCC+AGG - chr2_1:36868603-36868622 None:intergenic 55.0%
AAAGCCCTGCGTACCGAGAT+CGG - chr2_1:36869111-36869130 None:intergenic 55.0%
! GTACGCAGGGCTTTAGTGGT+GGG + chr2_1:36869117-36869136 Msa0206830:CDS 55.0%
GGTTCTGTTGGAGCTGCTCT+TGG + chr2_1:36869185-36869204 Msa0206830:CDS 55.0%
AGCCCGATCTGAACACAACC+CGG + chr2_1:36867512-36867531 Msa0206830:five_prime_UTR 55.0%
! CAACCCGGTTTTCCACGCAA+AGG + chr2_1:36867527-36867546 Msa0206830:five_prime_UTR 55.0%
!! GGGTTTTGTGAGGGGGTTTC+AGG - chr2_1:36867798-36867817 None:intergenic 55.0%
AGGTGGCCAACCCGAATCAA+GGG - chr2_1:36867944-36867963 None:intergenic 55.0%
AAGGTGGCCAACCCGAATCA+AGG - chr2_1:36867945-36867964 None:intergenic 55.0%
ATGGAACTCGGGGAACTCAC+CGG + chr2_1:36867968-36867987 Msa0206830:CDS 55.0%
!! TGGATGGGGTTGGTCGTTTG+TGG + chr2_1:36868347-36868366 Msa0206830:CDS 55.0%
AGGGTTTGCGAGTCCTGGAA+TGG + chr2_1:36868440-36868459 Msa0206830:CDS 55.0%
AAAGCAAACGGAGCGACTCC+AGG - chr2_1:36868603-36868622 None:intergenic 55.0%
AAAGCCCTGCGTACCGAGAT+CGG - chr2_1:36869111-36869130 None:intergenic 55.0%
! GTACGCAGGGCTTTAGTGGT+GGG + chr2_1:36869117-36869136 Msa0206830:CDS 55.0%
GGTTCTGTTGGAGCTGCTCT+TGG + chr2_1:36869185-36869204 Msa0206830:CDS 55.0%
CGAGATCAACCTCGCCAAGC+CGG - chr2_1:36867990-36868009 None:intergenic 60.0%
!! GTGTTTGGGATGGTGGGCAG+CGG + chr2_1:36868087-36868106 Msa0206830:CDS 60.0%
! GGTTGGTCGTTTGTGGTGCC+TGG + chr2_1:36868354-36868373 Msa0206830:CDS 60.0%
TGTTGAAACGGGCGGTGCAG+AGG + chr2_1:36868476-36868495 Msa0206830:CDS 60.0%
!! GTGTTGGTTGCAGCGGTTGC+TGG + chr2_1:36868819-36868838 Msa0206830:intron 60.0%
! GTTCTAGGCGGAATCACCGC+CGG + chr2_1:36868900-36868919 Msa0206830:CDS 60.0%
ACTGCTGTGGCTGCCGATCT+CGG + chr2_1:36869095-36869114 Msa0206830:CDS 60.0%
! CTCGGTACGCAGGGCTTTAG+TGG + chr2_1:36869113-36869132 Msa0206830:CDS 60.0%
! GGTACGCAGGGCTTTAGTGG+TGG + chr2_1:36869116-36869135 Msa0206830:CDS 60.0%
TGGTGGGAATTCTCGGGCAC+TGG + chr2_1:36869133-36869152 Msa0206830:CDS 60.0%
CGAGATCAACCTCGCCAAGC+CGG - chr2_1:36867990-36868009 None:intergenic 60.0%
!! GTGTTTGGGATGGTGGGCAG+CGG + chr2_1:36868087-36868106 Msa0206830:CDS 60.0%
! GGTTGGTCGTTTGTGGTGCC+TGG + chr2_1:36868354-36868373 Msa0206830:CDS 60.0%
TGTTGAAACGGGCGGTGCAG+AGG + chr2_1:36868476-36868495 Msa0206830:CDS 60.0%
!! GTGTTGGTTGCAGCGGTTGC+TGG + chr2_1:36868819-36868838 Msa0206830:intron 60.0%
! GTTCTAGGCGGAATCACCGC+CGG + chr2_1:36868900-36868919 Msa0206830:CDS 60.0%
ACTGCTGTGGCTGCCGATCT+CGG + chr2_1:36869095-36869114 Msa0206830:CDS 60.0%
! CTCGGTACGCAGGGCTTTAG+TGG + chr2_1:36869113-36869132 Msa0206830:CDS 60.0%
! GGTACGCAGGGCTTTAGTGG+TGG + chr2_1:36869116-36869135 Msa0206830:CDS 60.0%
TGGTGGGAATTCTCGGGCAC+TGG + chr2_1:36869133-36869152 Msa0206830:CDS 60.0%
! ACTCGGGGAACTCACCGGCT+TGG + chr2_1:36867973-36867992 Msa0206830:CDS 65.0%
GCTGCCGATCTCGGTACGCA+GGG + chr2_1:36869104-36869123 Msa0206830:CDS 65.0%
! ACTCGGGGAACTCACCGGCT+TGG + chr2_1:36867973-36867992 Msa0206830:CDS 65.0%
GCTGCCGATCTCGGTACGCA+GGG + chr2_1:36869104-36869123 Msa0206830:CDS 65.0%
!! GGGAACTCACCGGCTTGGCG+AGG + chr2_1:36867978-36867997 Msa0206830:CDS 70.0%
GGCTGCCGATCTCGGTACGC+AGG + chr2_1:36869103-36869122 Msa0206830:CDS 70.0%
!! GGGAACTCACCGGCTTGGCG+AGG + chr2_1:36867978-36867997 Msa0206830:CDS 70.0%
GGCTGCCGATCTCGGTACGC+AGG + chr2_1:36869103-36869122 Msa0206830:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 36867498 36869587 36867498 ID=Msa0206830;Name=Msa0206830
chr2_1 mRNA 36867498 36869587 36867498 ID=Msa0206830-mRNA-1;Parent=Msa0206830;Name=Msa0206830-mRNA-1;_AED=0.03;_eAED=0.03;_QI=241|1|1|1|1|1|2|241|489
chr2_1 exon 36867498 36868693 36867498 ID=Msa0206830-mRNA-1:exon:11949;Parent=Msa0206830-mRNA-1
chr2_1 exon 36868832 36869587 36868832 ID=Msa0206830-mRNA-1:exon:11950;Parent=Msa0206830-mRNA-1
chr2_1 five_prime_UTR 36867498 36867738 36867498 ID=Msa0206830-mRNA-1:five_prime_utr;Parent=Msa0206830-mRNA-1
chr2_1 CDS 36867739 36868693 36867739 ID=Msa0206830-mRNA-1:cds;Parent=Msa0206830-mRNA-1
chr2_1 CDS 36868832 36869346 36868832 ID=Msa0206830-mRNA-1:cds;Parent=Msa0206830-mRNA-1
chr2_1 three_prime_UTR 36869347 36869587 36869347 ID=Msa0206830-mRNA-1:three_prime_utr;Parent=Msa0206830-mRNA-1
Gene Sequence

>Msa0206830

ATGGAATCAAATTCCAAGAGTTTGAGCCTAGCTCCAGCTCTGAATCTCTTTCCAAACCTGAAACCCCCTCACAAAACCCTACTATTCCACCAAATATGTGTTCTTATTATCACATTTCTTGCATATGCTTCCTTTCATGCATCTAGGAAGCCTCCTAGTATTGTTAAAAGTGTTCTGGGACCCACAGTTCCAACCAATTCAACCCTTGATTCGGGTTGGCCACCTTTTAATGGAACTCGGGGAACTCACCGGCTTGGCGAGGTTGATCTCGCGTTTCTTACTTCTTACTCCATTGGCATGTATTTGGCTGGTCATGTTGGTGATAGGATTGATTTGAGGTTGTTTCTTGTGTTTGGGATGGTGGGCAGCGGTTTTTTTACGATACTTTTTGGGTTAGGATACTGGTTTGATGTTCATGTGTTGGGGTTTTTTGTCGGTGTTCAGATTGTTTGTGGAGTGTTTCAGTCAATTGGGTGGCCTTGTGTTGTTGCAGTTGTTGGGAATTGGCTTGGGGAATCAAAGAGGGGATTGATAATGGGGATATGGAATTCGCATACCTCGGTTGGGAATATCATTGGTTCAGTTATTGCTTCGGGTGTTTTGGAATTTGGATGGGGTTGGTCGTTTGTGGTGCCTGGAATTTTGATCATTTTCGTTGGGGTTTTGGTGTTTCTGTTTCTTGTTGTGAATCCCGTGGATATAGGGTTTGCGAGTCCTGGAATGGAAATTGAAATGAGTGTTGAAACGGGCGGTGCAGAGGATCTGCAGAAAGTCGAATCAGAGGAAGCAAAGCTAATTGATCCTGATAGTTCGATTTCAAATTCTTCGTCTGCTATTGGATTTTTAGAGGCGTGGAAAATACCTGGAGTCGCTCCGTTTGCTTTTTGTCTCTTTTTCTCAAAATTTGTTGCTTACACTTTCTTGTATTGGTTACCCTTCTACATAAGGCACACAGCGGTTGCTGGTGTGAATCTATCTCACAAAACTGCTGGGTTACTTTCAACAATATTTGATATTGGAGGAGTTCTAGGCGGAATCACCGCCGGTTTCATTTCTGATATGATTGAAGCTCGCGCTGTGACTTCAATCCTGTTCTTGTTTCTATCGATTCCAGCTCTGCTTTTGTATCGTGCTTTCGGGAGCATCTCTATGTTTACTAACATCACCTTGATGTTTCTTTCTGGATTTTTGGTGAATGGTCCGTACTCGCTAATTACAACTGCTGTGGCTGCCGATCTCGGTACGCAGGGCTTTAGTGGTGGGAATTCTCGGGCACTGGCTACTGTTACTGCAATCATTGATGGTACTGGTTCTGTTGGAGCTGCTCTTGGACCACTTTTAGCAGGTTATGTTTCAACTAGGGGATGGAACAGTGTATTTTTTATGCTCGTTTCGTCTATTTTCTTTGCTGGTTTATTCTTGATTCGAGTTGCAAGGACTGAGATAAGAGAGAAGTTTTCAGGAAAGTGA

Protein sequence

>Msa0206830

MESNSKSLSLAPALNLFPNLKPPHKTLLFHQICVLIITFLAYASFHASRKPPSIVKSVLGPTVPTNSTLDSGWPPFNGTRGTHRLGEVDLAFLTSYSIGMYLAGHVGDRIDLRLFLVFGMVGSGFFTILFGLGYWFDVHVLGFFVGVQIVCGVFQSIGWPCVVAVVGNWLGESKRGLIMGIWNSHTSVGNIIGSVIASGVLEFGWGWSFVVPGILIIFVGVLVFLFLVVNPVDIGFASPGMEIEMSVETGGAEDLQKVESEEAKLIDPDSSISNSSSAIGFLEAWKIPGVAPFAFCLFFSKFVAYTFLYWLPFYIRHTAVAGVNLSHKTAGLLSTIFDIGGVLGGITAGFISDMIEARAVTSILFLFLSIPALLLYRAFGSISMFTNITLMFLSGFLVNGPYSLITTAVAADLGTQGFSGGNSRALATVTAIIDGTGSVGAALGPLLAGYVSTRGWNSVFFMLVSSIFFAGLFLIRVARTEIREKFSGK*