Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653670 | XP_003608188.2 | 99.035 | 311 | 3 | 0 | 1 | 311 | 1 | 311 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653670 | sp|Q8H5X5|SCAM1_ORYSJ | 72.756 | 312 | 78 | 3 | 1 | 311 | 1 | 306 | 1.20e-172 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010490 | Msa0653670 | 0.802351 | 5.846016e-49 | -8.615850e-47 |
| Msa0030160 | Msa0653670 | 0.801163 | 1.025101e-48 | -8.615850e-47 |
| Msa0035020 | Msa0653670 | 0.818415 | 1.983828e-52 | -8.615850e-47 |
| Msa0036540 | Msa0653670 | 0.809704 | 1.659234e-50 | -8.615850e-47 |
| Msa0043650 | Msa0653670 | 0.809641 | 1.711756e-50 | -8.615850e-47 |
| Msa0052360 | Msa0653670 | 0.821583 | 3.738851e-53 | -8.615850e-47 |
| Msa0061500 | Msa0653670 | 0.803837 | 2.880901e-49 | -8.615850e-47 |
| Msa0078120 | Msa0653670 | 0.801006 | 1.103751e-48 | -8.615850e-47 |
| Msa0078640 | Msa0653670 | 0.817362 | 3.429986e-52 | -8.615850e-47 |
| Msa0082420 | Msa0653670 | 0.822708 | 2.050526e-53 | -8.615850e-47 |
| Msa0090510 | Msa0653670 | 0.823540 | 1.311069e-53 | -8.615850e-47 |
| Msa0090570 | Msa0653670 | 0.823255 | 1.528101e-53 | -8.615850e-47 |
| Msa0097370 | Msa0653670 | 0.804830 | 1.789667e-49 | -8.615850e-47 |
| Msa0106710 | Msa0653670 | 0.801107 | 1.052624e-48 | -8.615850e-47 |
| Msa0117520 | Msa0653670 | 0.821593 | 3.717281e-53 | -8.615850e-47 |
| Msa0604290 | Msa0653670 | 0.807919 | 3.995077e-50 | -8.615850e-47 |
| Msa0613340 | Msa0653670 | 0.866091 | 3.673819e-65 | -8.615850e-47 |
| Msa0620930 | Msa0653670 | 0.803824 | 2.898307e-49 | -8.615850e-47 |
| Msa0622120 | Msa0653670 | 0.802892 | 4.520676e-49 | -8.615850e-47 |
| Msa0624060 | Msa0653670 | 0.801327 | 9.487997e-49 | -8.615850e-47 |
| Msa0629240 | Msa0653670 | 0.804832 | 1.787272e-49 | -8.615850e-47 |
| Msa0632420 | Msa0653670 | 0.801660 | 8.108624e-49 | -8.615850e-47 |
| Msa0638350 | Msa0653670 | 0.820924 | 5.303530e-53 | -8.615850e-47 |
| Msa0638360 | Msa0653670 | 0.801687 | 8.004754e-49 | -8.615850e-47 |
| Msa0641130 | Msa0653670 | 0.819698 | 1.013323e-52 | -8.615850e-47 |
| Msa0651560 | Msa0653670 | 0.815851 | 7.479626e-52 | -8.615850e-47 |
| Msa0653670 | Msa0653880 | 0.812379 | 4.367877e-51 | -8.615850e-47 |
| Msa0653670 | Msa0655920 | 0.803528 | 3.339213e-49 | -8.615850e-47 |
| Msa0653670 | Msa0657120 | 0.811722 | 6.072998e-51 | -8.615850e-47 |
| Msa0653670 | Msa0679360 | 0.804343 | 2.260513e-49 | -8.615850e-47 |
| Msa0653670 | Msa0682680 | 0.834413 | 3.041034e-56 | -8.615850e-47 |
| Msa0653670 | Msa0696850 | 0.804584 | 2.013994e-49 | -8.615850e-47 |
| Msa0653670 | Msa0697590 | 0.828262 | 9.914948e-55 | -8.615850e-47 |
| Msa0653670 | Msa0697680 | 0.820064 | 8.355861e-53 | -8.615850e-47 |
| Msa0653670 | Msa0701100 | 0.815158 | 1.067140e-51 | -8.615850e-47 |
| Msa0653670 | Msa0703440 | 0.810720 | 1.001762e-50 | -8.615850e-47 |
| Msa0653670 | Msa0705390 | 0.802886 | 4.534238e-49 | -8.615850e-47 |
| Msa0653670 | Msa0707250 | 0.800674 | 1.289970e-48 | -8.615850e-47 |
| Msa0653670 | Msa0709120 | 0.829825 | 4.145124e-55 | -8.615850e-47 |
| Msa0653670 | Msa0711150 | 0.806868 | 6.674104e-50 | -8.615850e-47 |
| Msa0653670 | Msa0733010 | 0.830287 | 3.197344e-55 | -8.615850e-47 |
| Msa0653670 | Msa0743930 | 0.806405 | 8.359292e-50 | -8.615850e-47 |
| Msa0653670 | Msa0746170 | 0.810954 | 8.913908e-51 | -8.615850e-47 |
| Msa0653670 | Msa0746210 | 0.808200 | 3.481239e-50 | -8.615850e-47 |
| Msa0653670 | Msa0763890 | 0.806777 | 6.977495e-50 | -8.615850e-47 |
| Msa0653670 | Msa0763920 | 0.829730 | 4.370559e-55 | -8.615850e-47 |
| Msa0653670 | Msa0784480 | 0.821191 | 4.603138e-53 | -8.615850e-47 |
| Msa0653670 | Msa0797250 | 0.803302 | 3.719988e-49 | -8.615850e-47 |
| Msa0653670 | Msa0797770 | 0.824851 | 6.451186e-54 | -8.615850e-47 |
| Msa0653670 | Msa0808100 | 0.800911 | 1.153906e-48 | -8.615850e-47 |
| Msa0653670 | Msa0822500 | 0.839604 | 1.434380e-57 | -8.615850e-47 |
| Msa0653670 | Msa0823370 | 0.815388 | 9.486591e-52 | -8.615850e-47 |
| Msa0653670 | Msa0823540 | 0.804280 | 2.329835e-49 | -8.615850e-47 |
| Msa0653670 | Msa0826150 | 0.812714 | 3.689987e-51 | -8.615850e-47 |
| Msa0653670 | Msa0828240 | 0.804532 | 2.064567e-49 | -8.615850e-47 |
| Msa0653670 | Msa0830230 | 0.814261 | 1.686170e-51 | -8.615850e-47 |
| Msa0653670 | Msa0831110 | 0.800814 | 1.207742e-48 | -8.615850e-47 |
| Msa0653670 | Msa0833530 | 0.805296 | 1.429889e-49 | -8.615850e-47 |
| Msa0653670 | Msa0835230 | 0.830041 | 3.670614e-55 | -8.615850e-47 |
| Msa0653670 | Msa0844110 | 0.803307 | 3.711063e-49 | -8.615850e-47 |
| Msa0653670 | Msa0844280 | 0.805411 | 1.352141e-49 | -8.615850e-47 |
| Msa0653670 | Msa0867870 | 0.808472 | 3.046063e-50 | -8.615850e-47 |
| Msa0653670 | Msa0880810 | 0.810958 | 8.898185e-51 | -8.615850e-47 |
| Msa0653670 | Msa0890550 | 0.803294 | 3.734651e-49 | -8.615850e-47 |
| Msa0653670 | Msa0894710 | 0.837149 | 6.163028e-57 | -8.615850e-47 |
| Msa0653670 | Msa0899970 | 0.821579 | 3.745278e-53 | -8.615850e-47 |
| Msa0653670 | Msa0921420 | 0.826485 | 2.643806e-54 | -8.615850e-47 |
| Msa0653670 | Msa0960390 | 0.800560 | 1.360780e-48 | -8.615850e-47 |
| Msa0653670 | Msa0965080 | 0.837224 | 5.896729e-57 | -8.615850e-47 |
| Msa0653670 | Msa0965290 | 0.840480 | 8.479538e-58 | -8.615850e-47 |
| Msa0653670 | Msa0985180 | 0.802132 | 6.486592e-49 | -8.615850e-47 |
| Msa0653670 | Msa0992580 | 0.809916 | 1.493222e-50 | -8.615850e-47 |
| Msa0653670 | Msa0992600 | 0.808864 | 2.512119e-50 | -8.615850e-47 |
| Msa0653670 | Msa0999680 | 0.836436 | 9.369439e-57 | -8.615850e-47 |
| Msa0653670 | Msa1002960 | 0.808346 | 3.240355e-50 | -8.615850e-47 |
| Msa0653670 | Msa1011090 | 0.857684 | 1.380296e-62 | -8.615850e-47 |
| Msa0653670 | Msa1030810 | 0.814240 | 1.704364e-51 | -8.615850e-47 |
| Msa0653670 | Msa1034500 | 0.805588 | 1.241773e-49 | -8.615850e-47 |
| Msa0653670 | Msa1042660 | 0.814399 | 1.571621e-51 | -8.615850e-47 |
| Msa0653670 | Msa1063420 | 0.800877 | 1.172651e-48 | -8.615850e-47 |
| Msa0653670 | Msa1069890 | 0.805691 | 1.181361e-49 | -8.615850e-47 |
| Msa0653670 | Msa1076960 | 0.809522 | 1.815440e-50 | -8.615850e-47 |
| Msa0653670 | Msa1089450 | 0.863173 | 3.007915e-64 | -8.615850e-47 |
| Msa0653670 | Msa1089460 | 0.825138 | 5.520416e-54 | -8.615850e-47 |
| Msa0653670 | Msa1096070 | 0.814760 | 1.307211e-51 | -8.615850e-47 |
| Msa0653670 | Msa1104560 | 0.804491 | 2.106182e-49 | -8.615850e-47 |
| Msa0653670 | Msa1107200 | 0.811193 | 7.911133e-51 | -8.615850e-47 |
| Msa0653670 | Msa1122150 | 0.816797 | 4.595206e-52 | -8.615850e-47 |
| Msa0653670 | Msa1122860 | 0.806851 | 6.730964e-50 | -8.615850e-47 |
| Msa0653670 | Msa1127380 | 0.806496 | 7.997283e-50 | -8.615850e-47 |
| Msa0653670 | Msa1128270 | 0.815546 | 8.745765e-52 | -8.615850e-47 |
| Msa0653670 | Msa1137780 | 0.846075 | 2.726530e-59 | -8.615850e-47 |
| Msa0653670 | Msa1175200 | 0.852588 | 4.183120e-61 | -8.615850e-47 |
| Msa0653670 | Msa1178580 | 0.803398 | 3.553979e-49 | -8.615850e-47 |
| Msa0653670 | Msa1183140 | 0.821601 | 3.701542e-53 | -8.615850e-47 |
| Msa0653670 | Msa1183890 | 0.811812 | 5.805612e-51 | -8.615850e-47 |
| Msa0653670 | Msa1209440 | 0.802511 | 5.418306e-49 | -8.615850e-47 |
| Msa0653670 | Msa1211230 | -0.821233 | 4.502853e-53 | -8.615850e-47 |
| Msa0653670 | Msa1211420 | -0.808784 | 2.612210e-50 | -8.615850e-47 |
| Msa0653670 | Msa1212050 | 0.804954 | 1.685459e-49 | -8.615850e-47 |
| Msa0653670 | Msa1212130 | 0.813398 | 2.612291e-51 | -8.615850e-47 |
| Msa0653670 | Msa1213980 | 0.800219 | 1.597292e-48 | -8.615850e-47 |
| Msa0653670 | Msa1214170 | 0.801942 | 7.097626e-49 | -8.615850e-47 |
| Msa0653670 | Msa1218580 | 0.806566 | 7.729737e-50 | -8.615850e-47 |
| Msa0653670 | Msa1221330 | 0.816056 | 6.731136e-52 | -8.615850e-47 |
| Msa0653670 | Msa1225860 | -0.815255 | 1.015106e-51 | -8.615850e-47 |
| Msa0653670 | Msa1236110 | -0.821537 | 3.829536e-53 | -8.615850e-47 |
| Msa0653670 | Msa1236440 | 0.811767 | 5.939038e-51 | -8.615850e-47 |
| Msa0653670 | Msa1240970 | 0.832966 | 6.991438e-56 | -8.615850e-47 |
| Msa0653670 | Msa1243870 | 0.800235 | 1.585272e-48 | -8.615850e-47 |
| Msa0653670 | Msa1248830 | 0.809984 | 1.443722e-50 | -8.615850e-47 |
| Msa0653670 | Msa1259860 | 0.849122 | 3.959021e-60 | -8.615850e-47 |
| Msa0653670 | Msa1271130 | 0.829891 | 3.992787e-55 | -8.615850e-47 |
| Msa0653670 | Msa1276150 | 0.807321 | 5.352480e-50 | -8.615850e-47 |
| Msa0653670 | Msa1277670 | 0.801788 | 7.632556e-49 | -8.615850e-47 |
| Msa0653670 | Msa1277690 | 0.823838 | 1.116175e-53 | -8.615850e-47 |
| Msa0653670 | Msa1299400 | -0.805064 | 1.598874e-49 | -8.615850e-47 |
| Msa0653670 | Msa1305810 | 0.807035 | 6.153255e-50 | -8.615850e-47 |
| Msa0653670 | Msa1307180 | 0.818044 | 2.407246e-52 | -8.615850e-47 |
| Msa0653670 | Msa1316360 | 0.815706 | 8.056949e-52 | -8.615850e-47 |
| Msa0653670 | Msa1325410 | -0.853860 | 1.806978e-61 | -8.615850e-47 |
| Msa0653670 | Msa1331050 | -0.823641 | 1.241788e-53 | -8.615850e-47 |
| Msa0653670 | Msa1338400 | 0.803733 | 3.028555e-49 | -8.615850e-47 |
| Msa0653670 | Msa1340200 | 0.806114 | 9.623917e-50 | -8.615850e-47 |
| Msa0653670 | Msa1345940 | 0.816568 | 5.172371e-52 | -8.615850e-47 |
| Msa0653670 | Msa1346840 | 0.822467 | 2.332398e-53 | -8.615850e-47 |
| Msa0653670 | Msa1353890 | 0.803600 | 3.226611e-49 | -8.615850e-47 |
| Msa0653670 | Msa1355890 | 0.803907 | 2.785650e-49 | -8.615850e-47 |
| Msa0653670 | Msa1360020 | 0.800326 | 1.519136e-48 | -8.615850e-47 |
| Msa0653670 | Msa1368360 | 0.833960 | 3.950455e-56 | -8.615850e-47 |
| Msa0653670 | Msa1369690 | 0.815947 | 7.120727e-52 | -8.615850e-47 |
| Msa0653670 | Msa1369920 | -0.819405 | 1.181562e-52 | -8.615850e-47 |
| Msa0653670 | Msa1372280 | 0.808875 | 2.498133e-50 | -8.615850e-47 |
| Msa0653670 | Msa1378410 | 0.803813 | 2.914061e-49 | -8.615850e-47 |
| Msa0653670 | Msa1380220 | 0.806947 | 6.423178e-50 | -8.615850e-47 |
| Msa0653670 | Msa1382020 | 0.813587 | 2.373527e-51 | -8.615850e-47 |
| Msa0653670 | Msa1382790 | 0.800884 | 1.169041e-48 | -8.615850e-47 |
| Msa0653670 | Msa1386890 | 0.810824 | 9.513821e-51 | -8.615850e-47 |
| Msa0653670 | Msa1395730 | 0.800765 | 1.235948e-48 | -8.615850e-47 |
| Msa0653670 | Msa1400930 | 0.809615 | 1.733222e-50 | -8.615850e-47 |
| Msa0653670 | Msa1401460 | 0.806313 | 8.739713e-50 | -8.615850e-47 |
| Msa0653670 | Msa1407190 | 0.818274 | 2.135336e-52 | -8.615850e-47 |
| Msa0653670 | Msa1418240 | 0.815871 | 7.402613e-52 | -8.615850e-47 |
| Msa0653670 | Msa1419840 | 0.807316 | 5.365657e-50 | -8.615850e-47 |
| Msa0653670 | Msa1428780 | 0.816506 | 5.338949e-52 | -8.615850e-47 |
| Msa0653670 | Msa1432130 | 0.810804 | 9.605306e-51 | -8.615850e-47 |
| Msa0653670 | Msa1436600 | 0.800731 | 1.255707e-48 | -8.615850e-47 |
| Msa0653670 | Msa1437730 | 0.805149 | 1.534550e-49 | -8.615850e-47 |
| Msa0653670 | Msa1442920 | 0.850019 | 2.225640e-60 | -8.615850e-47 |
| Msa0653670 | Msa1452710 | 0.847297 | 1.264120e-59 | -8.615850e-47 |
| Msa0653670 | Msa1456230 | 0.808395 | 3.163514e-50 | -8.615850e-47 |
| Msa0653670 | Msa1458340 | 0.817092 | 3.944370e-52 | -8.615850e-47 |
| Msa0653670 | Msa1458680 | 0.832713 | 8.080851e-56 | -8.615850e-47 |
| Msa0653670 | Msa1461540 | 0.807156 | 5.800380e-50 | -8.615850e-47 |
| Msa0653670 | Msa1462360 | 0.822497 | 2.294978e-53 | -8.615850e-47 |
| Msa0653670 | Msa1463030 | 0.818710 | 1.700595e-52 | -8.615850e-47 |
| Msa0125650 | Msa0653670 | 0.801555 | 8.520091e-49 | -8.615850e-47 |
| Msa0137800 | Msa0653670 | 0.819424 | 1.170233e-52 | -8.615850e-47 |
| Msa0138020 | Msa0653670 | 0.834949 | 2.228882e-56 | -8.615850e-47 |
| Msa0139670 | Msa0653670 | 0.830077 | 3.598625e-55 | -8.615850e-47 |
| Msa0144530 | Msa0653670 | 0.800343 | 1.506535e-48 | -8.615850e-47 |
| Msa0152560 | Msa0653670 | 0.833221 | 6.039966e-56 | -8.615850e-47 |
| Msa0160940 | Msa0653670 | 0.821510 | 3.886922e-53 | -8.615850e-47 |
| Msa0160960 | Msa0653670 | 0.839426 | 1.595540e-57 | -8.615850e-47 |
| Msa0173800 | Msa0653670 | 0.812493 | 4.123151e-51 | -8.615850e-47 |
| Msa0183850 | Msa0653670 | 0.825810 | 3.827053e-54 | -8.615850e-47 |
| Msa0183910 | Msa0653670 | 0.816985 | 4.170446e-52 | -8.615850e-47 |
| Msa0189040 | Msa0653670 | 0.816957 | 4.230629e-52 | -8.615850e-47 |
| Msa0194920 | Msa0653670 | 0.821001 | 5.091914e-53 | -8.615850e-47 |
| Msa0204960 | Msa0653670 | 0.819721 | 1.000740e-52 | -8.615850e-47 |
| Msa0207040 | Msa0653670 | -0.801314 | 9.547896e-49 | -8.615850e-47 |
| Msa0217700 | Msa0653670 | 0.806666 | 7.363026e-50 | -8.615850e-47 |
| Msa0219590 | Msa0653670 | 0.825069 | 5.730701e-54 | -8.615850e-47 |
| Msa0232020 | Msa0653670 | 0.828123 | 1.070724e-54 | -8.615850e-47 |
| Msa0234090 | Msa0653670 | 0.825717 | 4.024631e-54 | -8.615850e-47 |
| Msa0236420 | Msa0653670 | 0.804405 | 2.194564e-49 | -8.615850e-47 |
| Msa0364790 | Msa0653670 | 0.801902 | 7.231618e-49 | -8.615850e-47 |
| Msa0369920 | Msa0653670 | 0.809473 | 1.859595e-50 | -8.615850e-47 |
| Msa0371950 | Msa0653670 | 0.832400 | 9.658473e-56 | -8.615850e-47 |
| Msa0372300 | Msa0653670 | 0.800959 | 1.128085e-48 | -8.615850e-47 |
| Msa0382370 | Msa0653670 | 0.863095 | 3.179874e-64 | -8.615850e-47 |
| Msa0388730 | Msa0653670 | 0.819458 | 1.149201e-52 | -8.615850e-47 |
| Msa0389210 | Msa0653670 | 0.809808 | 1.575541e-50 | -8.615850e-47 |
| Msa0395980 | Msa0653670 | 0.814676 | 1.364702e-51 | -8.615850e-47 |
| Msa0398200 | Msa0653670 | 0.833852 | 4.202023e-56 | -8.615850e-47 |
| Msa0403770 | Msa0653670 | 0.826545 | 2.557945e-54 | -8.615850e-47 |
| Msa0414140 | Msa0653670 | 0.806338 | 8.637054e-50 | -8.615850e-47 |
| Msa0417330 | Msa0653670 | 0.809531 | 1.807088e-50 | -8.615850e-47 |
| Msa0432160 | Msa0653670 | 0.872414 | 3.238177e-67 | -8.615850e-47 |
| Msa0432670 | Msa0653670 | 0.808570 | 2.902345e-50 | -8.615850e-47 |
| Msa0450400 | Msa0653670 | -0.830289 | 3.192816e-55 | -8.615850e-47 |
| Msa0476680 | Msa0653670 | 0.875127 | 3.934720e-68 | -8.615850e-47 |
| Msa0481970 | Msa0653670 | 0.839132 | 1.902425e-57 | -8.615850e-47 |
| Msa0240270 | Msa0653670 | 0.811549 | 6.622853e-51 | -8.615850e-47 |
| Msa0240900 | Msa0653670 | 0.851471 | 8.686259e-61 | -8.615850e-47 |
| Msa0241140 | Msa0653670 | 0.826318 | 2.896737e-54 | -8.615850e-47 |
| Msa0257490 | Msa0653670 | 0.817492 | 3.206352e-52 | -8.615850e-47 |
| Msa0264830 | Msa0653670 | 0.810922 | 9.060643e-51 | -8.615850e-47 |
| Msa0267790 | Msa0653670 | 0.817464 | 3.252835e-52 | -8.615850e-47 |
| Msa0270960 | Msa0653670 | 0.806437 | 8.231501e-50 | -8.615850e-47 |
| Msa0271550 | Msa0653670 | 0.817487 | 3.214743e-52 | -8.615850e-47 |
| Msa0278580 | Msa0653670 | 0.821245 | 4.473927e-53 | -8.615850e-47 |
| Msa0281530 | Msa0653670 | 0.804722 | 1.884278e-49 | -8.615850e-47 |
| Msa0283420 | Msa0653670 | 0.802833 | 4.649758e-49 | -8.615850e-47 |
| Msa0287870 | Msa0653670 | 0.832199 | 1.083409e-55 | -8.615850e-47 |
| Msa0296790 | Msa0653670 | 0.814672 | 1.367334e-51 | -8.615850e-47 |
| Msa0296820 | Msa0653670 | 0.818447 | 1.951196e-52 | -8.615850e-47 |
| Msa0302870 | Msa0653670 | 0.805306 | 1.422783e-49 | -8.615850e-47 |
| Msa0310440 | Msa0653670 | 0.804350 | 2.253695e-49 | -8.615850e-47 |
| Msa0315690 | Msa0653670 | 0.802096 | 6.595830e-49 | -8.615850e-47 |
| Msa0317960 | Msa0653670 | 0.819067 | 1.410754e-52 | -8.615850e-47 |
| Msa0317970 | Msa0653670 | 0.871659 | 5.775068e-67 | -8.615850e-47 |
| Msa0319290 | Msa0653670 | 0.816454 | 5.483717e-52 | -8.615850e-47 |
| Msa0332190 | Msa0653670 | 0.801119 | 1.046458e-48 | -8.615850e-47 |
| Msa0340340 | Msa0653670 | 0.812875 | 3.401938e-51 | -8.615850e-47 |
| Msa0347750 | Msa0653670 | 0.834405 | 3.054346e-56 | -8.615850e-47 |
| Msa0363790 | Msa0653670 | 0.821006 | 5.078333e-53 | -8.615850e-47 |
| Msa0485240 | Msa0653670 | 0.820408 | 6.969559e-53 | -8.615850e-47 |
| Msa0485490 | Msa0653670 | 0.800219 | 1.597292e-48 | -8.615850e-47 |
| Msa0491000 | Msa0653670 | 0.806476 | 8.076904e-50 | -8.615850e-47 |
| Msa0518170 | Msa0653670 | 0.812558 | 3.991974e-51 | -8.615850e-47 |
| Msa0521010 | Msa0653670 | 0.875229 | 3.631410e-68 | -8.615850e-47 |
| Msa0521670 | Msa0653670 | 0.807862 | 4.107511e-50 | -8.615850e-47 |
| Msa0526020 | Msa0653670 | 0.802668 | 5.029070e-49 | -8.615850e-47 |
| Msa0526730 | Msa0653670 | 0.816090 | 6.616240e-52 | -8.615850e-47 |
| Msa0527540 | Msa0653670 | 0.804332 | 2.272837e-49 | -8.615850e-47 |
| Msa0545050 | Msa0653670 | 0.814995 | 1.159805e-51 | -8.615850e-47 |
| Msa0547160 | Msa0653670 | 0.804015 | 2.646198e-49 | -8.615850e-47 |
| Msa0549890 | Msa0653670 | 0.807191 | 5.703253e-50 | -8.615850e-47 |
| Msa0581400 | Msa0653670 | 0.822718 | 2.039485e-53 | -8.615850e-47 |
| Msa0583360 | Msa0653670 | -0.812231 | 4.703714e-51 | -8.615850e-47 |
| Msa0592330 | Msa0653670 | 0.817604 | 3.025603e-52 | -8.615850e-47 |
| Msa0600590 | Msa0653670 | 0.837241 | 5.837598e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653670 | MtrunA17_Chr4g0047981 | 99.035 | 311 | 3 | 0 | 1 | 311 | 1 | 311 | 0.0 | 635 |
| Msa0653670 | MtrunA17_Chr2g0281411 | 77.409 | 301 | 45 | 2 | 1 | 301 | 1 | 278 | 1.86e-172 | 479 |
| Msa0653670 | MtrunA17_Chr4g0022441 | 72.026 | 311 | 79 | 3 | 3 | 311 | 2 | 306 | 2.75e-152 | 429 |
| Msa0653670 | MtrunA17_Chr5g0409961 | 57.432 | 296 | 90 | 5 | 1 | 291 | 1 | 265 | 9.16e-120 | 345 |
| Msa0653670 | MtrunA17_Chr2g0323921 | 67.407 | 135 | 43 | 1 | 176 | 310 | 66 | 199 | 2.68e-60 | 191 |
| Msa0653670 | MtrunA17_Chr2g0323931 | 61.224 | 98 | 33 | 1 | 5 | 102 | 6 | 98 | 2.10e-33 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0653670 | AT1G61250.1 | 69.010 | 313 | 69 | 5 | 1 | 310 | 1 | 288 | 4.66e-159 | 445 |
| Msa0653670 | AT1G11180.1 | 68.889 | 315 | 68 | 4 | 1 | 310 | 1 | 290 | 3.48e-158 | 443 |
| Msa0653670 | AT1G11180.3 | 66.984 | 315 | 67 | 5 | 1 | 310 | 1 | 283 | 4.52e-150 | 422 |
| Msa0653670 | AT1G11180.2 | 64.329 | 328 | 67 | 5 | 1 | 310 | 1 | 296 | 8.86e-148 | 417 |
| Msa0653670 | AT2G20840.1 | 67.961 | 309 | 71 | 3 | 3 | 311 | 2 | 282 | 1.71e-144 | 408 |
| Msa0653670 | AT1G61250.2 | 68.531 | 286 | 62 | 5 | 1 | 283 | 1 | 261 | 3.01e-142 | 402 |
| Msa0653670 | AT1G03550.1 | 61.812 | 309 | 91 | 2 | 3 | 311 | 2 | 283 | 1.87e-136 | 388 |
| Msa0653670 | AT2G20840.3 | 76.569 | 239 | 56 | 0 | 73 | 311 | 1 | 239 | 4.83e-131 | 372 |
| Msa0653670 | AT2G20840.2 | 76.569 | 239 | 56 | 0 | 73 | 311 | 1 | 239 | 4.83e-131 | 372 |
| Msa0653670 | AT1G03550.4 | 61.922 | 281 | 80 | 2 | 3 | 283 | 2 | 255 | 3.31e-122 | 351 |
| Msa0653670 | AT1G32050.1 | 56.803 | 294 | 94 | 5 | 1 | 292 | 1 | 263 | 2.39e-117 | 339 |
| Msa0653670 | AT1G03550.3 | 68.610 | 223 | 70 | 0 | 89 | 311 | 2 | 224 | 2.09e-112 | 325 |
| Msa0653670 | AT1G03550.5 | 60.385 | 260 | 76 | 2 | 3 | 262 | 2 | 234 | 2.25e-108 | 315 |
| Msa0653670 | AT1G03550.2 | 69.048 | 210 | 65 | 0 | 102 | 311 | 15 | 224 | 4.25e-105 | 306 |
| Msa0653670 | AT1G03550.6 | 62.551 | 243 | 64 | 2 | 3 | 245 | 2 | 217 | 7.68e-104 | 303 |
| Msa0653670 | AT1G03550.7 | 61.991 | 221 | 57 | 2 | 3 | 223 | 2 | 195 | 6.38e-96 | 282 |
Find 81 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGCATTTACTACATATT+TGG | 0.085998 | 4_3:-61831991 | Msa0653670:CDS |
| GCAATGTCGTGATGGATAAT+TGG | 0.196761 | 4_3:+61832050 | None:intergenic |
| GCCATTATCTACTTCATATC+AGG | 0.219332 | 4_3:-61831520 | Msa0653670:CDS |
| CCTGCTGATTATAATAATTA+TGG | 0.242414 | 4_3:-61833818 | Msa0653670:CDS |
| GATAAGCATTTGGGTTATTC+AGG | 0.247223 | 4_3:-61830571 | Msa0653670:intron |
| ACAGAAAGTGCTCTGAAATT+TGG | 0.255387 | 4_3:-61831306 | Msa0653670:CDS |
| TGTTACTGCTGCTTGGATTA+AGG | 0.267197 | 4_3:-61831827 | Msa0653670:CDS |
| GATTATAATAATTATGGCTT+TGG | 0.323050 | 4_3:-61833812 | Msa0653670:CDS |
| TGGAAACGTTGATAAGCATT+TGG | 0.329849 | 4_3:-61830581 | Msa0653670:CDS |
| TTGGCAGGTGGAACACTTCC+AGG | 0.333344 | 4_3:+61833872 | None:intergenic |
| ATAGACAACTCTACTTTGAT+TGG | 0.339286 | 4_3:-61830778 | Msa0653670:CDS |
| CGACATTGCTAATGAAATTC+CGG | 0.348677 | 4_3:-61832036 | Msa0653670:CDS |
| CACCACCACTGTAGTTTGAT+TGG | 0.353619 | 4_3:+61834655 | None:intergenic |
| GTTACTGCTGCTTGGATTAA+GGG | 0.358124 | 4_3:-61831826 | Msa0653670:CDS |
| AAATACAAAAGAATTGTCTT+TGG | 0.367130 | 4_3:+61835957 | None:intergenic |
| GTTGCATTTACTACATATTT+GGG | 0.367478 | 4_3:-61831990 | Msa0653670:intron |
| TCTTCTCAAATCAGCCTCCT+TGG | 0.380522 | 4_3:+61833597 | None:intergenic |
| AAAGAAGAACTTACAGAAAA+GGG | 0.387916 | 4_3:+61835735 | None:intergenic |
| CAGCTATAACATTCCACAAT+AGG | 0.403682 | 4_3:+61831848 | None:intergenic |
| CAATGTCGTGATGGATAATT+GGG | 0.404575 | 4_3:+61832051 | None:intergenic |
| AGAGTTGTCTATCACATCTA+TGG | 0.411851 | 4_3:+61830789 | None:intergenic |
| TAGACAACTCTACTTTGATT+GGG | 0.415020 | 4_3:-61830777 | Msa0653670:CDS |
| GGAAACGTTGATAAGCATTT+GGG | 0.415274 | 4_3:-61830580 | Msa0653670:CDS |
| AAAAGAAGAACTTACAGAAA+AGG | 0.421381 | 4_3:+61835734 | None:intergenic |
| TCAAATCAGCCTCCTTGGAT+TGG | 0.431822 | 4_3:+61833602 | None:intergenic |
| AAATGCTTATCAACGTTTCC+AGG | 0.442725 | 4_3:+61830583 | None:intergenic |
| TTAACTTCTTCTTCATCAAA+GGG | 0.448107 | 4_3:+61835759 | None:intergenic |
| TACTTCATATCAGGGGTACC+TGG | 0.455209 | 4_3:-61831511 | Msa0653670:CDS |
| CCCTGATATGAAGTAGATAA+TGG | 0.455504 | 4_3:+61831519 | None:intergenic |
| AGGAGGCTGATTTGAGAAGA+AGG | 0.459934 | 4_3:-61833594 | Msa0653670:CDS |
| GTTAACTTCTTCTTCATCAA+AGG | 0.471618 | 4_3:+61835758 | None:intergenic |
| TTATAGCTGTTACTGCTGCT+TGG | 0.474726 | 4_3:-61831834 | Msa0653670:CDS |
| CTAATAGGAACCAGCTGCAA+GGG | 0.474919 | 4_3:-61834691 | Msa0653670:intron |
| TTGTTCTTGAGGAAAAGAAT+TGG | 0.479685 | 4_3:-61832085 | Msa0653670:CDS |
| GTAAGGCTGCTGAGATGAAA+CGG | 0.481306 | 4_3:-61830404 | Msa0653670:CDS |
| TTATTATAATCAGCAGGCTC+TGG | 0.486525 | 4_3:+61833824 | None:intergenic |
| CACCATCGTCACAGATCTCA+TGG | 0.493848 | 4_3:-61835802 | Msa0653670:intron |
| ACATATATTGACCCATGAAA+AGG | 0.494157 | 4_3:+61830312 | None:intergenic |
| TGATTTGAGAAGAAGGGAAC+AGG | 0.499440 | 4_3:-61833587 | Msa0653670:intron |
| AGATGAAACGGGACGTTGCA+AGG | 0.512415 | 4_3:-61830392 | Msa0653670:CDS |
| TACATGTACTTCCGCGGAAG+TGG | 0.512831 | 4_3:-61830426 | Msa0653670:CDS |
| GACTAGTGGCGTGCCTATTG+TGG | 0.513746 | 4_3:-61831861 | Msa0653670:CDS |
| GTACTTCCGCGGAAGTGGTA+AGG | 0.515999 | 4_3:-61830421 | Msa0653670:CDS |
| CCATTATCTACTTCATATCA+GGG | 0.537386 | 4_3:-61831519 | Msa0653670:CDS |
| CCATAATTATTATAATCAGC+AGG | 0.544102 | 4_3:+61833818 | None:intergenic |
| TTCTCTAGATATTGTGCTAG+TGG | 0.550270 | 4_3:-61830107 | Msa0653670:three_prime_UTR |
| AGATTTGACATAACAGTGGC+TGG | 0.552967 | 4_3:-61830160 | Msa0653670:three_prime_UTR |
| ATCGTCACAGATCTCATGGC+TGG | 0.555595 | 4_3:-61835798 | Msa0653670:intron |
| TAAGGCTGCTGAGATGAAAC+GGG | 0.555749 | 4_3:-61830403 | Msa0653670:CDS |
| AAAGTGCTCTGAAATTTGGA+TGG | 0.555769 | 4_3:-61831302 | Msa0653670:CDS |
| TTTCCTTTGAAAACTATAGG+AGG | 0.556106 | 4_3:+61831098 | None:intergenic |
| TGCAGCTGGAATTGTTCTTG+AGG | 0.560259 | 4_3:-61832096 | Msa0653670:intron |
| TCAGCAGGCTCTGGCTCAAG+AGG | 0.565691 | 4_3:+61833833 | None:intergenic |
| GGAGGCTGATTTGAGAAGAA+GGG | 0.574251 | 4_3:-61833593 | Msa0653670:CDS |
| TACCACAGAACATATGCTCC+AGG | 0.578297 | 4_3:+61831493 | None:intergenic |
| TTTCATTAGCAATGTCGTGA+TGG | 0.578986 | 4_3:+61832042 | None:intergenic |
| GATGAAACGGGACGTTGCAA+GGG | 0.579861 | 4_3:-61830391 | Msa0653670:CDS |
| AAAATATGTCTAACAAGACT+AGG | 0.580614 | 4_3:+61830048 | None:intergenic |
| GCTGTATCATGCAGGACTAG+TGG | 0.591145 | 4_3:-61831875 | Msa0653670:intron |
| TTCTGCTTACAGGTTCACAT+AGG | 0.596304 | 4_3:-61831146 | Msa0653670:intron |
| GGAGAAGGAACTCCAATCCA+AGG | 0.597039 | 4_3:-61833614 | Msa0653670:CDS |
| ACTAATAGGAACCAGCTGCA+AGG | 0.599363 | 4_3:-61834692 | Msa0653670:intron |
| TAACATGTTAGCTATTCATG+TGG | 0.606456 | 4_3:-61830207 | Msa0653670:three_prime_UTR |
| TACCTGGAGCATATGTTCTG+TGG | 0.610432 | 4_3:-61831495 | Msa0653670:CDS |
| AGACAACTCTACTTTGATTG+GGG | 0.620543 | 4_3:-61830776 | Msa0653670:intron |
| CATACCGTTGATGTATCAAG+AGG | 0.630477 | 4_3:+61833773 | None:intergenic |
| AAGAAGAACTTACAGAAAAG+GGG | 0.636378 | 4_3:+61835736 | None:intergenic |
| AGCCAATCAAACTACAGTGG+TGG | 0.647558 | 4_3:-61834657 | Msa0653670:CDS |
| CAACAATTCTGAACTTACAG+AGG | 0.649368 | 4_3:+61830020 | None:intergenic |
| AAAGAAGAAGCTGCTGCACG+AGG | 0.652474 | 4_3:-61832449 | Msa0653670:intron |
| ATGAAACGGGACGTTGCAAG+GGG | 0.655213 | 4_3:-61830390 | Msa0653670:CDS |
| TAACTTCTTCTTCATCAAAG+GGG | 0.656707 | 4_3:+61835760 | None:intergenic |
| TAATAGGAACCAGCTGCAAG+GGG | 0.656933 | 4_3:-61834690 | Msa0653670:intron |
| CAGCAGCCTTACCACTTCCG+CGG | 0.662593 | 4_3:+61830415 | None:intergenic |
| GCTGCTTGGATTAAGGGTGA+AGG | 0.667466 | 4_3:-61831820 | Msa0653670:intron |
| CAAGTATACATGTACTTCCG+CGG | 0.676518 | 4_3:-61830432 | Msa0653670:CDS |
| TATACCTCTTGATACATCAA+CGG | 0.679523 | 4_3:-61833777 | Msa0653670:intron |
| CATTATCTACTTCATATCAG+GGG | 0.696824 | 4_3:-61831518 | Msa0653670:CDS |
| GCAGAGATTTGACATAACAG+TGG | 0.717840 | 4_3:-61830164 | Msa0653670:three_prime_UTR |
| TCAAGCCAATCAAACTACAG+TGG | 0.718625 | 4_3:-61834660 | Msa0653670:CDS |
| GAAGGAACTCCAATCCAAGG+AGG | 0.750966 | 4_3:-61833611 | Msa0653670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTTTTATTATTTTCATA+TGG | - | chr4_3:61831855-61831874 | Msa0653670:CDS | 10.0% |
| !!! | ATTTTTATTATTTTCATATG+GGG | - | chr4_3:61831857-61831876 | Msa0653670:CDS | 10.0% |
| !! | AAAAAAAGTAATAATTATTG+AGG | - | chr4_3:61831899-61831918 | Msa0653670:intron | 10.0% |
| !!! | TTTTAAAATTGTATGAAATT+TGG | - | chr4_3:61833104-61833123 | Msa0653670:intron | 10.0% |
| !! | CAAAAAAATAAAGAATTGTT+TGG | + | chr4_3:61830173-61830192 | None:intergenic | 15.0% |
| !!! | ATCTTGATTTTATTCTTTAA+AGG | - | chr4_3:61830362-61830381 | Msa0653670:exon | 15.0% |
| !!! | TCTTGATTTTATTCTTTAAA+GGG | - | chr4_3:61830363-61830382 | Msa0653670:exon | 15.0% |
| !!! | TTGTTTTAGTTGTTAAATAT+TGG | - | chr4_3:61830416-61830435 | Msa0653670:CDS | 15.0% |
| !! | TGAACATAAATAATTATAAC+TGG | + | chr4_3:61831432-61831451 | None:intergenic | 15.0% |
| !! | TAAAAGATTTGCAAAATAAT+AGG | + | chr4_3:61831716-61831735 | None:intergenic | 15.0% |
| !!! | TATTATTTTGCAAATCTTTT+AGG | - | chr4_3:61831715-61831734 | Msa0653670:intron | 15.0% |
| !! | AAAAGATATAATTCATTACA+AGG | + | chr4_3:61831990-61832009 | None:intergenic | 15.0% |
| !! | ATATCATATCTTACAAAAAA+TGG | + | chr4_3:61832046-61832065 | None:intergenic | 15.0% |
| !! | TTATTATCCATTTCAATATT+AGG | - | chr4_3:61832377-61832396 | Msa0653670:intron | 15.0% |
| !! | TAATATCATTATTCAATAGT+TGG | + | chr4_3:61832948-61832967 | None:intergenic | 15.0% |
| !!! | TTATTTCTAATTTCTAATAG+TGG | + | chr4_3:61833179-61833198 | None:intergenic | 15.0% |
| !!! | TTCTGAAACAAATATAAATA+CGG | + | chr4_3:61833617-61833636 | None:intergenic | 15.0% |
| !!! | TGTAAAAGAAGTTTTTTTTT+TGG | - | chr4_3:61834242-61834261 | Msa0653670:intron | 15.0% |
| !! | TCATTTATATAATCTAATGT+TGG | - | chr4_3:61835177-61835196 | Msa0653670:intron | 15.0% |
| !! | AAATACAAAAGAATTGTCTT+TGG | + | chr4_3:61830073-61830092 | None:intergenic | 20.0% |
| !! | ATGAATAAAGTCAAATGAAA+TGG | + | chr4_3:61830200-61830219 | None:intergenic | 20.0% |
| !!! | AAAGTTTTGATTTTTTGAAC+TGG | - | chr4_3:61830320-61830339 | Msa0653670:three_prime_UTR | 20.0% |
| !!! | AAGTTTTGATTTTTTGAACT+GGG | - | chr4_3:61830321-61830340 | Msa0653670:three_prime_UTR | 20.0% |
| !!! | AAGTATCTATTTTTAGTTGT+TGG | - | chr4_3:61830510-61830529 | Msa0653670:intron | 20.0% |
| !!! | GTTTTAATGTTGTTTTGTTT+TGG | - | chr4_3:61830564-61830583 | Msa0653670:intron | 20.0% |
| !!! | TTTGCACTATATTTTGATTT+TGG | - | chr4_3:61830733-61830752 | Msa0653670:intron | 20.0% |
| !!! | TTTTATTAGAATTTGGATTG+GGG | + | chr4_3:61831129-61831148 | None:intergenic | 20.0% |
| !!! | GTTTTATTAGAATTTGGATT+GGG | + | chr4_3:61831130-61831149 | None:intergenic | 20.0% |
| !!! | AGTTTTATTAGAATTTGGAT+TGG | + | chr4_3:61831131-61831150 | None:intergenic | 20.0% |
| !!! | GCATTAGTTTTATTAGAATT+TGG | + | chr4_3:61831136-61831155 | None:intergenic | 20.0% |
| !!! | TACTATGTTTTCCTTAATTT+TGG | - | chr4_3:61831307-61831326 | Msa0653670:CDS | 20.0% |
| !!! | ATTAGTTTAGACCAAAATTA+AGG | + | chr4_3:61831321-61831340 | None:intergenic | 20.0% |
| !!! | TAATTTTGGTCTAAACTAAT+AGG | - | chr4_3:61831321-61831340 | Msa0653670:intron | 20.0% |
| !! | ATAAGATCAAAATGATTTAC+AGG | + | chr4_3:61832099-61832118 | None:intergenic | 20.0% |
| !! | GATTATAATAATTATGGCTT+TGG | - | chr4_3:61832215-61832234 | Msa0653670:intron | 20.0% |
| !! | ACATGCAAATACATTATAAA+TGG | + | chr4_3:61832323-61832342 | None:intergenic | 20.0% |
| !! | TTCAAATCCTAATATTGAAA+TGG | + | chr4_3:61832387-61832406 | None:intergenic | 20.0% |
| !! | ATATTAGGATTTGAAAAAGA+AGG | - | chr4_3:61832392-61832411 | Msa0653670:intron | 20.0% |
| !!! | ATACTTTTGAGAGTTATAAT+TGG | - | chr4_3:61832700-61832719 | Msa0653670:intron | 20.0% |
| !! | TAACATATATATATAGGTTG+AGG | - | chr4_3:61832840-61832859 | Msa0653670:intron | 20.0% |
| !!! | AACATATATATATAGGTTGA+GGG | - | chr4_3:61832841-61832860 | Msa0653670:intron | 20.0% |
| !! | TTCCACAAAATGTTATTAAA+TGG | + | chr4_3:61832909-61832928 | None:intergenic | 20.0% |
| !! | AGATAAAATTAGACATTGAT+AGG | - | chr4_3:61832995-61833014 | Msa0653670:intron | 20.0% |
| !! | AAACTAAATAATATTCCATC+AGG | + | chr4_3:61833087-61833106 | None:intergenic | 20.0% |
| !! | ATTCTTAAAGAGAATTACAA+TGG | - | chr4_3:61833137-61833156 | Msa0653670:intron | 20.0% |
| !! | ATATAAAACAATCAGATTCT+TGG | + | chr4_3:61833283-61833302 | None:intergenic | 20.0% |
| !!! | TTTATATCATTTCTGAAGTT+TGG | - | chr4_3:61833296-61833315 | Msa0653670:intron | 20.0% |
| !! | TTATTTATTTATCCAAATGC+AGG | - | chr4_3:61833544-61833563 | Msa0653670:intron | 20.0% |
| !!! | TCTGAAACAAATATAAATAC+GGG | + | chr4_3:61833616-61833635 | None:intergenic | 20.0% |
| !! | GAAAGAAAATTTGTAAACTT+TGG | - | chr4_3:61835108-61835127 | Msa0653670:intron | 20.0% |
| !!! | ATTTTTCTTCACATTATTTG+TGG | + | chr4_3:61835751-61835770 | None:intergenic | 20.0% |
| !! | GAAGAAAAATATTATTCTGA+TGG | - | chr4_3:61835761-61835780 | Msa0653670:CDS | 20.0% |
| ! | AGTTTGAAAGTTGTAAAAGA+AGG | + | chr4_3:61830131-61830150 | None:intergenic | 25.0% |
| ! | TTAACTTCTTCTTCATCAAA+GGG | + | chr4_3:61830271-61830290 | None:intergenic | 25.0% |
| ! | AAAGAAGAACTTACAGAAAA+GGG | + | chr4_3:61830295-61830314 | None:intergenic | 25.0% |
| ! | AAAAGAAGAACTTACAGAAA+AGG | + | chr4_3:61830296-61830315 | None:intergenic | 25.0% |
| !!! | TATTTTTTAGAATTCAGCTC+AGG | - | chr4_3:61830669-61830688 | Msa0653670:intron | 25.0% |
| ! | TTGTGTAACTATAACTGTAT+TGG | - | chr4_3:61830702-61830721 | Msa0653670:intron | 25.0% |
| !! | CCATTTGAAATTGAAATAGA+GGG | + | chr4_3:61830760-61830779 | None:intergenic | 25.0% |
| !! | TCCATTTGAAATTGAAATAG+AGG | + | chr4_3:61830761-61830780 | None:intergenic | 25.0% |
| ! | CTCTAATACGATCTAAATTT+GGG | + | chr4_3:61830939-61830958 | None:intergenic | 25.0% |
| !! | CTTGAAAAGGTGTATATAAA+TGG | - | chr4_3:61831059-61831078 | Msa0653670:intron | 25.0% |
| !! | AAAAGGTGTATATAAATGGA+AGG | - | chr4_3:61831063-61831082 | Msa0653670:intron | 25.0% |
| !! | ATATGATCTATTTGAAGTGA+GGG | - | chr4_3:61831209-61831228 | Msa0653670:intron | 25.0% |
| ! | GGGATAATAGTTTATGATTA+AGG | - | chr4_3:61831230-61831249 | Msa0653670:intron | 25.0% |
| ! | TTTATGCATGTAAACATGAA+TGG | - | chr4_3:61831551-61831570 | Msa0653670:intron | 25.0% |
| ! | AGTTATAACATAATCAGCAA+AGG | + | chr4_3:61831770-61831789 | None:intergenic | 25.0% |
| ! | ATAATTCATTACAAGGTAGT+GGG | + | chr4_3:61831983-61832002 | None:intergenic | 25.0% |
| ! | TATAATTCATTACAAGGTAG+TGG | + | chr4_3:61831984-61832003 | None:intergenic | 25.0% |
| !! | TTTTTACAATCTGAACTCTA+AGG | - | chr4_3:61832006-61832025 | Msa0653670:CDS | 25.0% |
| ! | CATATCTTACAAAAAATGGA+TGG | + | chr4_3:61832042-61832061 | None:intergenic | 25.0% |
| !!! | TTTTTAAAATGTCAGAATCC+TGG | - | chr4_3:61832137-61832156 | Msa0653670:intron | 25.0% |
| ! | CCATAATTATTATAATCAGC+AGG | + | chr4_3:61832212-61832231 | None:intergenic | 25.0% |
| !! | CCTGCTGATTATAATAATTA+TGG | - | chr4_3:61832209-61832228 | Msa0653670:intron | 25.0% |
| ! | TGGAAAGAAAAAAAAAACTG+AGG | + | chr4_3:61832303-61832322 | None:intergenic | 25.0% |
| ! | CAAGAATCAATGTTATATGA+TGG | + | chr4_3:61832637-61832656 | None:intergenic | 25.0% |
| ! | AATTTCGCAATTAACCAAAT+GGG | + | chr4_3:61832810-61832829 | None:intergenic | 25.0% |
| !!! | TGCCATTTAATAACATTTTG+TGG | - | chr4_3:61832904-61832923 | Msa0653670:intron | 25.0% |
| ! | TTAAAGAGAATTACAATGGT+TGG | - | chr4_3:61833141-61833160 | Msa0653670:intron | 25.0% |
| ! | AATTGTTACAATCCGAAATT+AGG | - | chr4_3:61833338-61833357 | Msa0653670:intron | 25.0% |
| !! | TAAATTGCTATTACTGTTTG+AGG | - | chr4_3:61833683-61833702 | Msa0653670:intron | 25.0% |
| ! | TTCTGCTTAATTCTTCTAAT+AGG | - | chr4_3:61833892-61833911 | Msa0653670:intron | 25.0% |
| ! | TGTTGCATTTACTACATATT+TGG | - | chr4_3:61834036-61834055 | Msa0653670:intron | 25.0% |
| ! | GTTGCATTTACTACATATTT+GGG | - | chr4_3:61834037-61834056 | Msa0653670:intron | 25.0% |
| ! | TACCTAAAAACACGATATAA+TGG | + | chr4_3:61834564-61834583 | None:intergenic | 25.0% |
| !! | CATATTTAGAATCAAGAGTA+TGG | + | chr4_3:61834683-61834702 | None:intergenic | 25.0% |
| !!! | GATTTTCCTTTGAAAACTAT+AGG | + | chr4_3:61834935-61834954 | None:intergenic | 25.0% |
| !!! | CTTTTTTGACTACATTTTTG+TGG | - | chr4_3:61835006-61835025 | Msa0653670:intron | 25.0% |
| ! | TATTTATTCACACTGATACA+GGG | - | chr4_3:61835203-61835222 | Msa0653670:intron | 25.0% |
| !! | TTGTAGATTTTCTACTTCAT+TGG | - | chr4_3:61835406-61835425 | Msa0653670:intron | 25.0% |
| !! | ATTTTCTACTTCATTGGATT+TGG | - | chr4_3:61835412-61835431 | Msa0653670:intron | 25.0% |
| ! | TGAATGAGCTTAAAGATAAA+CGG | + | chr4_3:61835506-61835525 | None:intergenic | 25.0% |
| ! | TATGCATTGTAAGAAAATCA+TGG | + | chr4_3:61835544-61835563 | None:intergenic | 25.0% |
| !! | CATTCTGATATATCATTTTG+TGG | - | chr4_3:61835674-61835693 | Msa0653670:intron | 25.0% |
| ! | AAAATATGTCTAACAAGACT+AGG | + | chr4_3:61835982-61836001 | None:intergenic | 25.0% |
| !! | TCTTGTTAGACATATTTTTC+AGG | - | chr4_3:61835984-61836003 | Msa0653670:five_prime_UTR | 25.0% |
| GTTGTAAAAGAAGGAAAAGA+AGG | + | chr4_3:61830122-61830141 | None:intergenic | 30.0% | |
| TAACTTCTTCTTCATCAAAG+GGG | + | chr4_3:61830270-61830289 | None:intergenic | 30.0% | |
| GTTAACTTCTTCTTCATCAA+AGG | + | chr4_3:61830272-61830291 | None:intergenic | 30.0% | |
| AAGAAGAACTTACAGAAAAG+GGG | + | chr4_3:61830294-61830313 | None:intergenic | 30.0% | |
| ! | GTTGTTAAATATTGGTTGAC+TGG | - | chr4_3:61830424-61830443 | Msa0653670:CDS | 30.0% |
| ! | TTAAATATTGGTTGACTGGT+TGG | - | chr4_3:61830428-61830447 | Msa0653670:CDS | 30.0% |
| CCCTCTATTTCAATTTCAAA+TGG | - | chr4_3:61830757-61830776 | Msa0653670:intron | 30.0% | |
| !! | TTTCTGTATTGATGATGATG+TGG | - | chr4_3:61830782-61830801 | Msa0653670:CDS | 30.0% |
| !! | AATGCCCTTTTTGTTTGTTA+TGG | - | chr4_3:61830806-61830825 | Msa0653670:CDS | 30.0% |
| CACACCATAACAAACAAAAA+GGG | + | chr4_3:61830813-61830832 | None:intergenic | 30.0% | |
| TCACACCATAACAAACAAAA+AGG | + | chr4_3:61830814-61830833 | None:intergenic | 30.0% | |
| AATACGATCTAAATTTGGGT+TGG | + | chr4_3:61830935-61830954 | None:intergenic | 30.0% | |
| GCTCTAATACGATCTAAATT+TGG | + | chr4_3:61830940-61830959 | None:intergenic | 30.0% | |
| !! | TCATTATAAGTCGGTTTTGT+AGG | - | chr4_3:61831092-61831111 | Msa0653670:CDS | 30.0% |
| !! | CATTATAAGTCGGTTTTGTA+GGG | - | chr4_3:61831093-61831112 | Msa0653670:CDS | 30.0% |
| ! | GATATGATCTATTTGAAGTG+AGG | - | chr4_3:61831208-61831227 | Msa0653670:intron | 30.0% |
| ! | TATGATCTATTTGAAGTGAG+GGG | - | chr4_3:61831210-61831229 | Msa0653670:intron | 30.0% |
| ACATAGTAAATAAGTCAGCA+GGG | + | chr4_3:61831295-61831314 | None:intergenic | 30.0% | |
| AACATAGTAAATAAGTCAGC+AGG | + | chr4_3:61831296-61831315 | None:intergenic | 30.0% | |
| AAGTCACAAGTAACAACAAT+AGG | - | chr4_3:61831480-61831499 | Msa0653670:CDS | 30.0% | |
| CAAGTAACAACAATAGGTTA+TGG | - | chr4_3:61831486-61831505 | Msa0653670:CDS | 30.0% | |
| ! | AATGATGATGCATAAAGAAG+AGG | - | chr4_3:61831647-61831666 | Msa0653670:intron | 30.0% |
| ! | ACATAATCAGCAAAGGTTTT+TGG | + | chr4_3:61831763-61831782 | None:intergenic | 30.0% |
| CTAAAGTTAAATTGTATCGC+TGG | + | chr4_3:61831945-61831964 | None:intergenic | 30.0% | |
| ! | GTAGTGGGATTTATAAAAAC+TGG | + | chr4_3:61831968-61831987 | None:intergenic | 30.0% |
| TATACCTCTTGATACATCAA+CGG | - | chr4_3:61832250-61832269 | Msa0653670:intron | 30.0% | |
| ! | TGTGTCTTTTTGTTCACTTT+AGG | - | chr4_3:61832479-61832498 | Msa0653670:intron | 30.0% |
| GAAATGAGAAATGAAAACAG+AGG | + | chr4_3:61832564-61832583 | None:intergenic | 30.0% | |
| ACAGAAATATGGATATGGAA+GGG | + | chr4_3:61832594-61832613 | None:intergenic | 30.0% | |
| AACAGAAATATGGATATGGA+AGG | + | chr4_3:61832595-61832614 | None:intergenic | 30.0% | |
| CTCAAACAGAAATATGGATA+TGG | + | chr4_3:61832599-61832618 | None:intergenic | 30.0% | |
| AGACTTCTCAAACAGAAATA+TGG | + | chr4_3:61832605-61832624 | None:intergenic | 30.0% | |
| TTTGAGAAGTCTTAAATAGC+TGG | - | chr4_3:61832757-61832776 | Msa0653670:intron | 30.0% | |
| CAATTTCGCAATTAACCAAA+TGG | + | chr4_3:61832811-61832830 | None:intergenic | 30.0% | |
| CATTTGGTTAATTGCGAAAT+TGG | - | chr4_3:61832809-61832828 | Msa0653670:intron | 30.0% | |
| ACAAGTATCTAGAAATTCAC+AGG | - | chr4_3:61833503-61833522 | Msa0653670:intron | 30.0% | |
| ! | TGTCCTGCAGAATTTTATTA+AGG | - | chr4_3:61833741-61833760 | Msa0653670:intron | 30.0% |
| AGACCTTAATAAAATTCTGC+AGG | + | chr4_3:61833747-61833766 | None:intergenic | 30.0% | |
| CAGAACTAAATTTGTAGAGA+AGG | + | chr4_3:61833877-61833896 | None:intergenic | 30.0% | |
| TTGTTCTTGAGGAAAAGAAT+TGG | - | chr4_3:61833942-61833961 | Msa0653670:intron | 30.0% | |
| ! | TGATGGATAATTGGGAAAAA+TGG | + | chr4_3:61833971-61833990 | None:intergenic | 30.0% |
| !! | TGCAATTTTTGAAGATGAAC+CGG | + | chr4_3:61834013-61834032 | None:intergenic | 30.0% |
| !! | GTGTTAGTCATTTTATATCG+CGG | - | chr4_3:61834116-61834135 | Msa0653670:intron | 30.0% |
| ! | ATGATACAGCTTTTAATCAG+TGG | + | chr4_3:61834142-61834161 | None:intergenic | 30.0% |
| TTGACACAGGTGTAAAAATT+TGG | - | chr4_3:61834478-61834497 | Msa0653670:intron | 30.0% | |
| ! | AGGTGTAAAAATTTGGTTTC+TGG | - | chr4_3:61834485-61834504 | Msa0653670:intron | 30.0% |
| CCATTATCTACTTCATATCA+GGG | - | chr4_3:61834508-61834527 | Msa0653670:intron | 30.0% | |
| CATTATCTACTTCATATCAG+GGG | - | chr4_3:61834509-61834528 | Msa0653670:intron | 30.0% | |
| ! | GTCCATTATATCGTGTTTTT+AGG | - | chr4_3:61834559-61834578 | Msa0653670:intron | 30.0% |
| ! | ATGGTTTTTCATGCTTTATC+TGG | - | chr4_3:61834744-61834763 | Msa0653670:intron | 30.0% |
| CATAACTTATGCACATGAAT+TGG | + | chr4_3:61834821-61834840 | None:intergenic | 30.0% | |
| ! | TTTCCTTTGAAAACTATAGG+AGG | + | chr4_3:61834932-61834951 | None:intergenic | 30.0% |
| CTATTTATTCACACTGATAC+AGG | - | chr4_3:61835202-61835221 | Msa0653670:intron | 30.0% | |
| ATTTATTCACACTGATACAG+GGG | - | chr4_3:61835204-61835223 | Msa0653670:intron | 30.0% | |
| ATAGACAACTCTACTTTGAT+TGG | - | chr4_3:61835249-61835268 | Msa0653670:intron | 30.0% | |
| TAGACAACTCTACTTTGATT+GGG | - | chr4_3:61835250-61835269 | Msa0653670:intron | 30.0% | |
| TTGGTCACATTTGCAATATT+TGG | + | chr4_3:61835350-61835369 | None:intergenic | 30.0% | |
| ! | AACAATTCAGAAGTTTGCTT+TGG | + | chr4_3:61835369-61835388 | None:intergenic | 30.0% |
| ! | GATATATCATTTTGTGGAGA+AGG | - | chr4_3:61835680-61835699 | Msa0653670:intron | 30.0% |
| !! | AGTATGGATTACCTTTTCAT+GGG | - | chr4_3:61835704-61835723 | Msa0653670:intron | 30.0% |
| ACATATATTGACCCATGAAA+AGG | + | chr4_3:61835718-61835737 | None:intergenic | 30.0% | |
| TAACATGTTAGCTATTCATG+TGG | - | chr4_3:61835820-61835839 | Msa0653670:intron | 30.0% | |
| ! | TTTTCTCAAGTTTCTTCAAC+AGG | - | chr4_3:61835950-61835969 | Msa0653670:intron | 30.0% |
| GTAAAAGAAGGAAAAGAAGG+TGG | + | chr4_3:61830119-61830138 | None:intergenic | 35.0% | |
| GTCTCTTTGATTCTTTGTGT+AGG | - | chr4_3:61830532-61830551 | Msa0653670:intron | 35.0% | |
| TATTTCAACAGCTCTTGGAT+AGG | + | chr4_3:61830962-61830981 | None:intergenic | 35.0% | |
| ! | ATGCTCTAGATATCCAATTC+TGG | - | chr4_3:61831005-61831024 | Msa0653670:intron | 35.0% |
| ! | TGCTCTAGATATCCAATTCT+GGG | - | chr4_3:61831006-61831025 | Msa0653670:intron | 35.0% |
| AGGCATCTCTCATTATAAGT+CGG | - | chr4_3:61831083-61831102 | Msa0653670:intron | 35.0% | |
| TGGAGTTAGTGCTAAAGATT+AGG | - | chr4_3:61831516-61831535 | Msa0653670:CDS | 35.0% | |
| AGTTAGTGCTAAAGATTAGG+AGG | - | chr4_3:61831519-61831538 | Msa0653670:CDS | 35.0% | |
| AGTTAAATTGTATCGCTGGA+TGG | + | chr4_3:61831941-61831960 | None:intergenic | 35.0% | |
| TTATTATAATCAGCAGGCTC+TGG | + | chr4_3:61832206-61832225 | None:intergenic | 35.0% | |
| GGATTTGAAAAAGAAGGAGA+AGG | - | chr4_3:61832398-61832417 | Msa0653670:intron | 35.0% | |
| CAGTACAAATGTTCCAATCT+CGG | + | chr4_3:61832531-61832550 | None:intergenic | 35.0% | |
| CAGAAATATGGATATGGAAG+GGG | + | chr4_3:61832593-61832612 | None:intergenic | 35.0% | |
| AGACTTCTCAAACAGAAAGA+TGG | + | chr4_3:61832749-61832768 | None:intergenic | 35.0% | |
| GATTATATTAGCGACCCATT+TGG | - | chr4_3:61832793-61832812 | Msa0653670:intron | 35.0% | |
| TGGCAAAACTTGAAAGTTTC+AGG | + | chr4_3:61832889-61832908 | None:intergenic | 35.0% | |
| GTTAAAATGAAGTTGCCTGA+TGG | - | chr4_3:61833069-61833088 | Msa0653670:intron | 35.0% | |
| AGACTTACTCCTGAAATAAG+TGG | - | chr4_3:61833227-61833246 | Msa0653670:intron | 35.0% | |
| GAATAGGATCCACTTATTTC+AGG | + | chr4_3:61833239-61833258 | None:intergenic | 35.0% | |
| ACATGAACGAATGCATGAAT+AGG | + | chr4_3:61833255-61833274 | None:intergenic | 35.0% | |
| TCCAGAGATCAACCTAATTT+CGG | + | chr4_3:61833353-61833372 | None:intergenic | 35.0% | |
| AGTTAACTTTGCCTGCATAA+GGG | - | chr4_3:61833454-61833473 | Msa0653670:intron | 35.0% | |
| !! | AAGTTGATAAACCCTTATGC+AGG | + | chr4_3:61833468-61833487 | None:intergenic | 35.0% |
| ! | ATTGCTATTACTGTTTGAGG+TGG | - | chr4_3:61833686-61833705 | Msa0653670:intron | 35.0% |
| !!! | TTGACATTTTGTTTTGCAGC+TGG | - | chr4_3:61833917-61833936 | Msa0653670:intron | 35.0% |
| TGGATAATTGGGAAAAATGG+CGG | + | chr4_3:61833968-61833987 | None:intergenic | 35.0% | |
| !! | CAATGTCGTGATGGATAATT+GGG | + | chr4_3:61833979-61833998 | None:intergenic | 35.0% |
| TTTCATTAGCAATGTCGTGA+TGG | + | chr4_3:61833988-61834007 | None:intergenic | 35.0% | |
| CGACATTGCTAATGAAATTC+CGG | - | chr4_3:61833991-61834010 | Msa0653670:intron | 35.0% | |
| GTGATCCTCTTTATTGTTCT+TGG | - | chr4_3:61834063-61834082 | Msa0653670:intron | 35.0% | |
| TGGAACCAAGAACAATAAAG+AGG | + | chr4_3:61834071-61834090 | None:intergenic | 35.0% | |
| TCAAGAACCAATGGCATAAT+TGG | + | chr4_3:61834091-61834110 | None:intergenic | 35.0% | |
| ACACAATACTCAAGAACCAA+TGG | + | chr4_3:61834100-61834119 | None:intergenic | 35.0% | |
| GATTAAAAGCTGTATCATGC+AGG | - | chr4_3:61834144-61834163 | Msa0653670:intron | 35.0% | |
| CAGCTATAACATTCCACAAT+AGG | + | chr4_3:61834182-61834201 | None:intergenic | 35.0% | |
| !!! | TTTTTTGGTCTAGTAGCAAG+TGG | - | chr4_3:61834257-61834276 | Msa0653670:intron | 35.0% |
| ACCTCATAAGGTGAATAAGT+GGG | - | chr4_3:61834290-61834309 | Msa0653670:intron | 35.0% | |
| ! | GCATAGCTCAATTGATAGTA+GGG | + | chr4_3:61834361-61834380 | None:intergenic | 35.0% |
| ! | AGCATAGCTCAATTGATAGT+AGG | + | chr4_3:61834362-61834381 | None:intergenic | 35.0% |
| TATCAATTGAGCTATGCTCA+TGG | - | chr4_3:61834364-61834383 | Msa0653670:intron | 35.0% | |
| ATCAATTGAGCTATGCTCAT+GGG | - | chr4_3:61834365-61834384 | Msa0653670:intron | 35.0% | |
| GCCATTATCTACTTCATATC+AGG | - | chr4_3:61834507-61834526 | Msa0653670:intron | 35.0% | |
| CCCTGATATGAAGTAGATAA+TGG | + | chr4_3:61834511-61834530 | None:intergenic | 35.0% | |
| ATTATGAGACTGCAACAAGT+TGG | - | chr4_3:61834635-61834654 | Msa0653670:intron | 35.0% | |
| TTATGAGACTGCAACAAGTT+GGG | - | chr4_3:61834636-61834655 | Msa0653670:intron | 35.0% | |
| !! | ATATGCACCTTTTTCATTGC+AGG | - | chr4_3:61834698-61834717 | Msa0653670:intron | 35.0% |
| TTTCTGTCCTGCAATGAAAA+AGG | + | chr4_3:61834708-61834727 | None:intergenic | 35.0% | |
| !! | ACAGAAAGTGCTCTGAAATT+TGG | - | chr4_3:61834721-61834740 | Msa0653670:intron | 35.0% |
| !! | AAAGTGCTCTGAAATTTGGA+TGG | - | chr4_3:61834725-61834744 | Msa0653670:intron | 35.0% |
| ! | TTGTTTCTTCTTCTGCTTAC+AGG | - | chr4_3:61834871-61834890 | Msa0653670:intron | 35.0% |
| ! | TTGTTTTCCTTGCAGAAGAT+AGG | - | chr4_3:61835049-61835068 | Msa0653670:intron | 35.0% |
| AAGTAAACCTATCTTCTGCA+AGG | + | chr4_3:61835059-61835078 | None:intergenic | 35.0% | |
| AGAGTTGTCTATCACATCTA+TGG | + | chr4_3:61835241-61835260 | None:intergenic | 35.0% | |
| AGACAACTCTACTTTGATTG+GGG | - | chr4_3:61835251-61835270 | Msa0653670:intron | 35.0% | |
| AAATGCTTATCAACGTTTCC+AGG | + | chr4_3:61835447-61835466 | None:intergenic | 35.0% | |
| ! | TGGAAACGTTGATAAGCATT+TGG | - | chr4_3:61835446-61835465 | Msa0653670:intron | 35.0% |
| ! | GGAAACGTTGATAAGCATTT+GGG | - | chr4_3:61835447-61835466 | Msa0653670:intron | 35.0% |
| ! | GATAAGCATTTGGGTTATTC+AGG | - | chr4_3:61835456-61835475 | Msa0653670:intron | 35.0% |
| !!! | ATAGCTGCTCACTTTTTCTT+TGG | - | chr4_3:61835561-61835580 | Msa0653670:intron | 35.0% |
| !! | CAGTATGGATTACCTTTTCA+TGG | - | chr4_3:61835703-61835722 | Msa0653670:intron | 35.0% |
| TTCTCTAGATATTGTGCTAG+TGG | - | chr4_3:61835920-61835939 | Msa0653670:intron | 35.0% | |
| CAACAATTCTGAACTTACAG+AGG | + | chr4_3:61836010-61836029 | None:intergenic | 35.0% | |
| ! | GTACTATGGTTGATGTGGTT+GGG | - | chr4_3:61830450-61830469 | Msa0653670:intron | 40.0% |
| ! | TACTATGGTTGATGTGGTTG+GGG | - | chr4_3:61830451-61830470 | Msa0653670:intron | 40.0% |
| ! | TGAGCTGAATTCTAAAGGCA+AGG | + | chr4_3:61830590-61830609 | None:intergenic | 40.0% |
| !! | TTGCCTTTAGAATTCAGCTC+AGG | - | chr4_3:61830589-61830608 | Msa0653670:CDS | 40.0% |
| AAGCCTGAGCTGAATTCTAA+AGG | + | chr4_3:61830595-61830614 | None:intergenic | 40.0% | |
| ! | GAATTCAGCTCAGGCTTTTT+AGG | - | chr4_3:61830598-61830617 | Msa0653670:CDS | 40.0% |
| ! | AGAATTCAGCTCAGGCTTTT+AGG | - | chr4_3:61830597-61830616 | Msa0653670:CDS | 40.0% |
| AAGGTGAGAGATGTGACATT+AGG | + | chr4_3:61830881-61830900 | None:intergenic | 40.0% | |
| ACATCTCTCACCTTACTAGT+CGG | - | chr4_3:61830887-61830906 | Msa0653670:intron | 40.0% | |
| !! | ACCTTACTAGTCGGTTTTGT+GGG | - | chr4_3:61830896-61830915 | Msa0653670:intron | 40.0% |
| GTGAGTATTTCAACAGCTCT+TGG | + | chr4_3:61830967-61830986 | None:intergenic | 40.0% | |
| ! | ATTTGGATTGGGGCTAACTT+AGG | + | chr4_3:61831119-61831138 | None:intergenic | 40.0% |
| TCAAGCCAATCAAACTACAG+TGG | - | chr4_3:61831367-61831386 | Msa0653670:intron | 40.0% | |
| ! | GCTTTTCTGTGATGCTTTTC+AGG | - | chr4_3:61831815-61831834 | Msa0653670:intron | 40.0% |
| !! | CAATCTGAACTCTAAGGTCT+AGG | - | chr4_3:61832012-61832031 | Msa0653670:CDS | 40.0% |
| TTCCACCTGCCAAAAATTCA+AGG | - | chr4_3:61832165-61832184 | Msa0653670:intron | 40.0% | |
| !!! | GAAAGCCTTGAATTTTTGGC+AGG | + | chr4_3:61832173-61832192 | None:intergenic | 40.0% |
| ! | AGGCGAAAGCCTTGAATTTT+TGG | + | chr4_3:61832177-61832196 | None:intergenic | 40.0% |
| CATACCGTTGATGTATCAAG+AGG | + | chr4_3:61832257-61832276 | None:intergenic | 40.0% | |
| TTCTTGCAAGAATCGAACTG+AGG | - | chr4_3:61832344-61832363 | Msa0653670:intron | 40.0% | |
| TGATTTGAGAAGAAGGGAAC+AGG | - | chr4_3:61832440-61832459 | Msa0653670:intron | 40.0% | |
| AGAAGGGAACAGGTATACAA+TGG | - | chr4_3:61832450-61832469 | Msa0653670:CDS | 40.0% | |
| GAAGGGAACAGGTATACAAT+GGG | - | chr4_3:61832451-61832470 | Msa0653670:CDS | 40.0% | |
| TCTCGGTAAATATCCACTGA+GGG | + | chr4_3:61832514-61832533 | None:intergenic | 40.0% | |
| ATCTCGGTAAATATCCACTG+AGG | + | chr4_3:61832515-61832534 | None:intergenic | 40.0% | |
| CAGTGGATATTTACCGAGAT+TGG | - | chr4_3:61832515-61832534 | Msa0653670:intron | 40.0% | |
| AAAGTTTCAGGACTTTCCCT+CGG | + | chr4_3:61832877-61832896 | None:intergenic | 40.0% | |
| !! | TCCGAAATTAGGTTGATCTC+TGG | - | chr4_3:61833349-61833368 | Msa0653670:intron | 40.0% |
| CAGTTAACTTTGCCTGCATA+AGG | - | chr4_3:61833453-61833472 | Msa0653670:intron | 40.0% | |
| TGCACTAATTTAGTCCTGCT+TGG | - | chr4_3:61833784-61833803 | Msa0653670:CDS | 40.0% | |
| AGAAACAAAAAGAGCCAAGC+AGG | + | chr4_3:61833801-61833820 | None:intergenic | 40.0% | |
| !! | GCAATGTCGTGATGGATAAT+TGG | + | chr4_3:61833980-61833999 | None:intergenic | 40.0% |
| CTTGGTTCCAATTATGCCAT+TGG | - | chr4_3:61834081-61834100 | Msa0653670:intron | 40.0% | |
| TTATAGCTGTTACTGCTGCT+TGG | - | chr4_3:61834193-61834212 | Msa0653670:intron | 40.0% | |
| ! | TGTTACTGCTGCTTGGATTA+AGG | - | chr4_3:61834200-61834219 | Msa0653670:intron | 40.0% |
| ! | GTTACTGCTGCTTGGATTAA+GGG | - | chr4_3:61834201-61834220 | Msa0653670:intron | 40.0% |
| GGCTAGAAATTCACCTCATA+AGG | - | chr4_3:61834278-61834297 | Msa0653670:intron | 40.0% | |
| CACCTCATAAGGTGAATAAG+TGG | - | chr4_3:61834289-61834308 | Msa0653670:intron | 40.0% | |
| CCTCATAAGGTGAATAAGTG+GGG | - | chr4_3:61834291-61834310 | Msa0653670:intron | 40.0% | |
| TGCATGTAATATGCAGGAGT+CGG | + | chr4_3:61834334-61834353 | None:intergenic | 40.0% | |
| GGACATTGCATGTAATATGC+AGG | + | chr4_3:61834340-61834359 | None:intergenic | 40.0% | |
| TCAATTGAGCTATGCTCATG+GGG | - | chr4_3:61834366-61834385 | Msa0653670:intron | 40.0% | |
| TGTTTCATGCACATGGCATA+AGG | + | chr4_3:61834449-61834468 | None:intergenic | 40.0% | |
| TATGCCATGTGCATGAAACA+TGG | - | chr4_3:61834449-61834468 | Msa0653670:intron | 40.0% | |
| AAAGCCATGTTTCATGCACA+TGG | + | chr4_3:61834456-61834475 | None:intergenic | 40.0% | |
| !! | AACATGGCTTTGTTTGACAC+AGG | - | chr4_3:61834465-61834484 | Msa0653670:intron | 40.0% |
| TTCTGCTTACAGGTTCACAT+AGG | - | chr4_3:61834881-61834900 | Msa0653670:intron | 40.0% | |
| ! | GCTCCTCCTATAGTTTTCAA+AGG | - | chr4_3:61834926-61834945 | Msa0653670:intron | 40.0% |
| ATTGAGTGCGTAGAGTAAGT+TGG | + | chr4_3:61834969-61834988 | None:intergenic | 40.0% | |
| ! | TGGATTTGGATTTTTCTGCC+TGG | - | chr4_3:61835426-61835445 | Msa0653670:intron | 40.0% |
| CAAGTATACATGTACTTCCG+CGG | - | chr4_3:61835595-61835614 | Msa0653670:intron | 40.0% | |
| ! | ATTTTGTGGAGAAGGCAGTA+TGG | - | chr4_3:61835688-61835707 | Msa0653670:intron | 40.0% |
| GCAGAGATTTGACATAACAG+TGG | - | chr4_3:61835863-61835882 | Msa0653670:intron | 40.0% | |
| AGATTTGACATAACAGTGGC+TGG | - | chr4_3:61835867-61835886 | Msa0653670:intron | 40.0% | |
| TGGTGAGGTGAGGTAATTAC+AGG | + | chr4_3:61830099-61830118 | None:intergenic | 45.0% | |
| AGAAGGAAAAGAAGGTGGTG+AGG | + | chr4_3:61830114-61830133 | None:intergenic | 45.0% | |
| ! | TGGTTGACTGGTTGGTACTA+TGG | - | chr4_3:61830436-61830455 | Msa0653670:intron | 45.0% |
| ! | GGTTGGTACTATGGTTGATG+TGG | - | chr4_3:61830445-61830464 | Msa0653670:intron | 45.0% |
| ! | GGTACTATGGTTGATGTGGT+TGG | - | chr4_3:61830449-61830468 | Msa0653670:intron | 45.0% |
| !!! | GTTGGGGAAACTGGTTTTTG+AGG | - | chr4_3:61830467-61830486 | Msa0653670:intron | 45.0% |
| !! | CACCTTACTAGTCGGTTTTG+TGG | - | chr4_3:61830895-61830914 | Msa0653670:intron | 45.0% |
| !! | CCTTACTAGTCGGTTTTGTG+GGG | - | chr4_3:61830897-61830916 | Msa0653670:intron | 45.0% |
| !! | CTTACTAGTCGGTTTTGTGG+GGG | - | chr4_3:61830898-61830917 | Msa0653670:intron | 45.0% |
| ACACTCATCACACCCAGAAT+TGG | + | chr4_3:61831021-61831040 | None:intergenic | 45.0% | |
| ! | AGTGTGTGTTGACAGTCTCA+CGG | - | chr4_3:61831036-61831055 | Msa0653670:intron | 45.0% |
| ACTAATAGGAACCAGCTGCA+AGG | - | chr4_3:61831335-61831354 | Msa0653670:intron | 45.0% | |
| CTAATAGGAACCAGCTGCAA+GGG | - | chr4_3:61831336-61831355 | Msa0653670:intron | 45.0% | |
| TAATAGGAACCAGCTGCAAG+GGG | - | chr4_3:61831337-61831356 | Msa0653670:intron | 45.0% | |
| AGCCAATCAAACTACAGTGG+TGG | - | chr4_3:61831370-61831389 | Msa0653670:intron | 45.0% | |
| CACCACCACTGTAGTTTGAT+TGG | + | chr4_3:61831375-61831394 | None:intergenic | 45.0% | |
| CAATAGGTTATGGTCAGCAG+TGG | - | chr4_3:61831496-61831515 | Msa0653670:CDS | 45.0% | |
| !!! | AGCCTTGAATTTTTGGCAGG+TGG | + | chr4_3:61832170-61832189 | None:intergenic | 45.0% |
| TCAAATCAGCCTCCTTGGAT+TGG | + | chr4_3:61832428-61832447 | None:intergenic | 45.0% | |
| TCTTCTCAAATCAGCCTCCT+TGG | + | chr4_3:61832433-61832452 | None:intergenic | 45.0% | |
| !! | AGGAGGCTGATTTGAGAAGA+AGG | - | chr4_3:61832433-61832452 | Msa0653670:intron | 45.0% |
| !! | GGAGGCTGATTTGAGAAGAA+GGG | - | chr4_3:61832434-61832453 | Msa0653670:intron | 45.0% |
| TTCGTCTCACTTCCTGCATT+TGG | + | chr4_3:61833559-61833578 | None:intergenic | 45.0% | |
| TGCAGCTGGAATTGTTCTTG+AGG | - | chr4_3:61833931-61833950 | Msa0653670:intron | 45.0% | |
| CCCCACTTATTCACCTTATG+AGG | + | chr4_3:61834294-61834313 | None:intergenic | 45.0% | |
| GTGAATAAGTGGGGAGTTCA+GGG | - | chr4_3:61834300-61834319 | Msa0653670:intron | 45.0% | |
| CATGTAATATGCAGGAGTCG+GGG | + | chr4_3:61834332-61834351 | None:intergenic | 45.0% | |
| GCATGTAATATGCAGGAGTC+GGG | + | chr4_3:61834333-61834352 | None:intergenic | 45.0% | |
| CTCATGGGGACTATAGAAGA+AGG | - | chr4_3:61834380-61834399 | Msa0653670:intron | 45.0% | |
| !! | TACTTCATATCAGGGGTACC+TGG | - | chr4_3:61834516-61834535 | Msa0653670:intron | 45.0% |
| TACCTGGAGCATATGTTCTG+TGG | - | chr4_3:61834532-61834551 | Msa0653670:intron | 45.0% | |
| TACCACAGAACATATGCTCC+AGG | + | chr4_3:61834537-61834556 | None:intergenic | 45.0% | |
| ! | GCATTTGGGTTATTCAGGTC+TGG | - | chr4_3:61835461-61835480 | Msa0653670:intron | 45.0% |
| !!! | CTGCTCACTTTTTCTTTGGC+TGG | - | chr4_3:61835565-61835584 | Msa0653670:intron | 45.0% |
| GTAAGGCTGCTGAGATGAAA+CGG | - | chr4_3:61835623-61835642 | Msa0653670:intron | 45.0% | |
| TAAGGCTGCTGAGATGAAAC+GGG | - | chr4_3:61835624-61835643 | Msa0653670:intron | 45.0% | |
| !!! | AATTTTTATTATTTTCATAT+GGG | - | chr4_3:61831856-61831875 | Msa0653670:CDS | 5.0% |
| !! | TTAAATTAACATATATATAT+AGG | - | chr4_3:61832834-61832853 | Msa0653670:intron | 5.0% |
| GAAAAGAAGGTGGTGAGGTG+AGG | + | chr4_3:61830109-61830128 | None:intergenic | 50.0% | |
| CACCATCGTCACAGATCTCA+TGG | - | chr4_3:61830225-61830244 | Msa0653670:three_prime_UTR | 50.0% | |
| AGCCATGAGATCTGTGACGA+TGG | + | chr4_3:61830230-61830249 | None:intergenic | 50.0% | |
| ATCGTCACAGATCTCATGGC+TGG | - | chr4_3:61830229-61830248 | Msa0653670:three_prime_UTR | 50.0% | |
| GTTGATGTGGTTGGGGAAAC+TGG | - | chr4_3:61830458-61830477 | Msa0653670:intron | 50.0% | |
| CCCCACAAAACCGACTAGTA+AGG | + | chr4_3:61830900-61830919 | None:intergenic | 50.0% | |
| GACAGTCTCACGGCTTGAAA+AGG | - | chr4_3:61831046-61831065 | Msa0653670:intron | 50.0% | |
| ! | GATGTTTTTCCCCTTGCAGC+TGG | + | chr4_3:61831349-61831368 | None:intergenic | 50.0% |
| GGAGAAGGAACTCCAATCCA+AGG | - | chr4_3:61832413-61832432 | Msa0653670:intron | 50.0% | |
| GAAGGAACTCCAATCCAAGG+AGG | - | chr4_3:61832416-61832435 | Msa0653670:intron | 50.0% | |
| ! | TAGGTTGAGAGTTCCCTCAG+TGG | - | chr4_3:61832498-61832517 | Msa0653670:intron | 50.0% |
| ! | TTGAGGGTGCATTTAGTCCG+AGG | - | chr4_3:61832857-61832876 | Msa0653670:intron | 50.0% |
| ! | TGAGGGTGCATTTAGTCCGA+GGG | - | chr4_3:61832858-61832877 | Msa0653670:intron | 50.0% |
| AAAGAAGAAGCTGCTGCACG+AGG | - | chr4_3:61833578-61833597 | Msa0653670:intron | 50.0% | |
| GCTGTATCATGCAGGACTAG+TGG | - | chr4_3:61834152-61834171 | Msa0653670:intron | 50.0% | |
| GCTGCTTGGATTAAGGGTGA+AGG | - | chr4_3:61834207-61834226 | Msa0653670:intron | 50.0% | |
| GGTGAATAAGTGGGGAGTTC+AGG | - | chr4_3:61834299-61834318 | Msa0653670:intron | 50.0% | |
| ! | GAGTAAGTTGGCGTACGTCA+GGG | + | chr4_3:61834957-61834976 | None:intergenic | 50.0% |
| ! | AGAGTAAGTTGGCGTACGTC+AGG | + | chr4_3:61834958-61834977 | None:intergenic | 50.0% |
| TACATGTACTTCCGCGGAAG+TGG | - | chr4_3:61835601-61835620 | Msa0653670:intron | 50.0% | |
| AGATGAAACGGGACGTTGCA+AGG | - | chr4_3:61835635-61835654 | Msa0653670:intron | 50.0% | |
| GATGAAACGGGACGTTGCAA+GGG | - | chr4_3:61835636-61835655 | Msa0653670:intron | 50.0% | |
| ATGAAACGGGACGTTGCAAG+GGG | - | chr4_3:61835637-61835656 | Msa0653670:intron | 50.0% | |
| TTGGCAGGTGGAACACTTCC+AGG | + | chr4_3:61832158-61832177 | None:intergenic | 55.0% | |
| GACTAGTGGCGTGCCTATTG+TGG | - | chr4_3:61834166-61834185 | Msa0653670:intron | 55.0% | |
| GTACTTCCGCGGAAGTGGTA+AGG | - | chr4_3:61835606-61835625 | Msa0653670:intron | 55.0% | |
| ! | TCAGCAGGCTCTGGCTCAAG+AGG | + | chr4_3:61832197-61832216 | None:intergenic | 60.0% |
| CAGCAGCCTTACCACTTCCG+CGG | + | chr4_3:61835615-61835634 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 61830001 | 61836048 | 61830001 | ID=Msa0653670;Name=Msa0653670 |
| chr4_3 | mRNA | 61830001 | 61836048 | 61830001 | ID=Msa0653670-mRNA-1;Parent=Msa0653670;Name=Msa0653670-mRNA-1;_AED=0.10;_eAED=0.10;_QI=103|1|1|1|0.92|0.85|14|367|311 |
| chr4_3 | exon | 61830001 | 61830454 | 61830001 | ID=Msa0653670-mRNA-1:exon:17037;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61830572 | 61830637 | 61830572 | ID=Msa0653670-mRNA-1:exon:17036;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61830777 | 61830825 | 61830777 | ID=Msa0653670-mRNA-1:exon:17035;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61831089 | 61831156 | 61831089 | ID=Msa0653670-mRNA-1:exon:17034;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61831284 | 61831329 | 61831284 | ID=Msa0653670-mRNA-1:exon:17033;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61831469 | 61831562 | 61831469 | ID=Msa0653670-mRNA-1:exon:17032;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61831821 | 61831883 | 61831821 | ID=Msa0653670-mRNA-1:exon:17031;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61831991 | 61832113 | 61831991 | ID=Msa0653670-mRNA-1:exon:17030;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61832450 | 61832483 | 61832450 | ID=Msa0653670-mRNA-1:exon:17029;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61833588 | 61833650 | 61833588 | ID=Msa0653670-mRNA-1:exon:17028;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61833778 | 61833897 | 61833778 | ID=Msa0653670-mRNA-1:exon:17027;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61834641 | 61834706 | 61834641 | ID=Msa0653670-mRNA-1:exon:17026;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61835749 | 61835810 | 61835749 | ID=Msa0653670-mRNA-1:exon:17025;Parent=Msa0653670-mRNA-1 |
| chr4_3 | exon | 61835951 | 61836048 | 61835951 | ID=Msa0653670-mRNA-1:exon:17024;Parent=Msa0653670-mRNA-1 |
| chr4_3 | five_prime_UTR | 61835951 | 61836048 | 61835951 | ID=Msa0653670-mRNA-1:five_prime_utr;Parent=Msa0653670-mRNA-1 |
| chr4_3 | five_prime_UTR | 61835806 | 61835810 | 61835806 | ID=Msa0653670-mRNA-1:five_prime_utr;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61835749 | 61835805 | 61835749 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61834641 | 61834706 | 61834641 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61833778 | 61833897 | 61833778 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61833588 | 61833650 | 61833588 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61832450 | 61832483 | 61832450 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61831991 | 61832113 | 61831991 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61831821 | 61831883 | 61831821 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61831469 | 61831562 | 61831469 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61831284 | 61831329 | 61831284 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61831089 | 61831156 | 61831089 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61830777 | 61830825 | 61830777 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61830572 | 61830637 | 61830572 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | CDS | 61830368 | 61830454 | 61830368 | ID=Msa0653670-mRNA-1:cds;Parent=Msa0653670-mRNA-1 |
| chr4_3 | three_prime_UTR | 61830001 | 61830367 | 61830001 | ID=Msa0653670-mRNA-1:three_prime_utr;Parent=Msa0653670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
