Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798120 | XP_003611768.1 | 97.721 | 351 | 8 | 0 | 1 | 351 | 1 | 351 | 0.0 | 720 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798120 | sp|Q9FV50|MAP1D_ARATH | 78.070 | 342 | 71 | 2 | 12 | 351 | 11 | 350 | 0.0 | 550 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798120 | G7K801 | 97.721 | 351 | 8 | 0 | 1 | 351 | 1 | 351 | 0.0 | 720 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046670 | Msa0798120 | 0.801067 | 1.072278e-48 | -8.615850e-47 |
| Msa0052550 | Msa0798120 | 0.805504 | 1.292801e-49 | -8.615850e-47 |
| Msa0078080 | Msa0798120 | 0.824140 | 9.485789e-54 | -8.615850e-47 |
| Msa0618260 | Msa0798120 | 0.814903 | 1.215608e-51 | -8.615850e-47 |
| Msa0643800 | Msa0798120 | 0.800292 | 1.543059e-48 | -8.615850e-47 |
| Msa0715180 | Msa0798120 | 0.813997 | 1.928044e-51 | -8.615850e-47 |
| Msa0720850 | Msa0798120 | 0.812798 | 3.536748e-51 | -8.615850e-47 |
| Msa0726000 | Msa0798120 | 0.809334 | 1.991836e-50 | -8.615850e-47 |
| Msa0749900 | Msa0798120 | 0.834566 | 2.782787e-56 | -8.615850e-47 |
| Msa0795930 | Msa0798120 | 0.801361 | 9.338188e-49 | -8.615850e-47 |
| Msa0798120 | Msa0804930 | 0.810221 | 1.283610e-50 | -8.615850e-47 |
| Msa0798120 | Msa0830120 | 0.829958 | 3.846447e-55 | -8.615850e-47 |
| Msa0798120 | Msa0830450 | 0.830016 | 3.723353e-55 | -8.615850e-47 |
| Msa0798120 | Msa0836200 | 0.809516 | 1.820859e-50 | -8.615850e-47 |
| Msa0798120 | Msa0837590 | 0.802724 | 4.896901e-49 | -8.615850e-47 |
| Msa0798120 | Msa0841980 | 0.802570 | 5.269897e-49 | -8.615850e-47 |
| Msa0798120 | Msa0868040 | 0.812185 | 4.815709e-51 | -8.615850e-47 |
| Msa0798120 | Msa0906150 | 0.817133 | 3.861492e-52 | -8.615850e-47 |
| Msa0798120 | Msa0910650 | 0.805379 | 1.373769e-49 | -8.615850e-47 |
| Msa0798120 | Msa1072640 | 0.800808 | 1.211591e-48 | -8.615850e-47 |
| Msa0798120 | Msa1127530 | 0.805267 | 1.449697e-49 | -8.615850e-47 |
| Msa0798120 | Msa1178970 | 0.812141 | 4.923185e-51 | -8.615850e-47 |
| Msa0798120 | Msa1182480 | 0.821685 | 3.541111e-53 | -8.615850e-47 |
| Msa0798120 | Msa1184640 | 0.801237 | 9.900693e-49 | -8.615850e-47 |
| Msa0798120 | Msa1189630 | 0.820000 | 8.642940e-53 | -8.615850e-47 |
| Msa0798120 | Msa1202730 | 0.801363 | 9.327037e-49 | -8.615850e-47 |
| Msa0798120 | Msa1296930 | 0.812989 | 3.211162e-51 | -8.615850e-47 |
| Msa0798120 | Msa1300880 | 0.812579 | 3.948900e-51 | -8.615850e-47 |
| Msa0798120 | Msa1319520 | 0.811655 | 6.281311e-51 | -8.615850e-47 |
| Msa0798120 | Msa1319720 | 0.833606 | 4.843156e-56 | -8.615850e-47 |
| Msa0798120 | Msa1384980 | 0.807721 | 4.401621e-50 | -8.615850e-47 |
| Msa0798120 | Msa1408190 | 0.806586 | 7.654336e-50 | -8.615850e-47 |
| Msa0798120 | Msa1420130 | 0.800674 | 1.289893e-48 | -8.615850e-47 |
| Msa0798120 | Msa1437650 | 0.836424 | 9.433013e-57 | -8.615850e-47 |
| Msa0798120 | Msa1448990 | 0.805526 | 1.279491e-49 | -8.615850e-47 |
| Msa0123900 | Msa0798120 | 0.805883 | 1.076414e-49 | -8.615850e-47 |
| Msa0153640 | Msa0798120 | 0.814203 | 1.736227e-51 | -8.615850e-47 |
| Msa0164630 | Msa0798120 | 0.816871 | 4.422068e-52 | -8.615850e-47 |
| Msa0168900 | Msa0798120 | 0.804436 | 2.161879e-49 | -8.615850e-47 |
| Msa0367310 | Msa0798120 | 0.807074 | 6.038241e-50 | -8.615850e-47 |
| Msa0414990 | Msa0798120 | 0.805767 | 1.138805e-49 | -8.615850e-47 |
| Msa0455610 | Msa0798120 | 0.806796 | 6.911359e-50 | -8.615850e-47 |
| Msa0463540 | Msa0798120 | 0.812375 | 4.376705e-51 | -8.615850e-47 |
| Msa0463580 | Msa0798120 | 0.803737 | 3.021628e-49 | -8.615850e-47 |
| Msa0476820 | Msa0798120 | 0.810880 | 9.251423e-51 | -8.615850e-47 |
| Msa0292300 | Msa0798120 | 0.818746 | 1.668634e-52 | -8.615850e-47 |
| Msa0313800 | Msa0798120 | 0.804764 | 1.847216e-49 | -8.615850e-47 |
| Msa0330370 | Msa0798120 | 0.824835 | 6.509589e-54 | -8.615850e-47 |
| Msa0493430 | Msa0798120 | 0.819587 | 1.074094e-52 | -8.615850e-47 |
| Msa0515680 | Msa0798120 | 0.806101 | 9.688152e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798120 | MtrunA17_Chr5g0402401 | 97.721 | 351 | 8 | 0 | 1 | 351 | 1 | 351 | 0.0 | 720 |
| Msa0798120 | MtrunA17_Chr5g0422531 | 58.449 | 361 | 135 | 4 | 1 | 351 | 1 | 356 | 3.19e-145 | 414 |
| Msa0798120 | MtrunA17_Chr4g0011731 | 50.530 | 283 | 134 | 2 | 73 | 349 | 100 | 382 | 4.86e-96 | 291 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798120 | AT4G37040.1 | 78.070 | 342 | 71 | 2 | 12 | 351 | 11 | 350 | 0.0 | 550 |
| Msa0798120 | AT1G13270.1 | 60.390 | 308 | 117 | 2 | 49 | 351 | 62 | 369 | 1.53e-135 | 390 |
| Msa0798120 | AT3G25740.1 | 56.954 | 302 | 121 | 4 | 55 | 349 | 42 | 341 | 1.17e-117 | 344 |
| Msa0798120 | AT2G45240.1 | 49.281 | 278 | 135 | 3 | 78 | 349 | 106 | 383 | 7.07e-90 | 275 |
| Msa0798120 | AT1G13270.2 | 60.377 | 212 | 79 | 2 | 49 | 255 | 62 | 273 | 1.37e-84 | 258 |
| Msa0798120 | AT2G45240.2 | 47.907 | 215 | 107 | 2 | 78 | 287 | 106 | 320 | 2.31e-65 | 210 |
| Msa0798120 | AT3G25740.2 | 50.575 | 174 | 71 | 3 | 55 | 219 | 42 | 209 | 3.68e-44 | 153 |
Find 96 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTACCTCGATCACTTTC+TGG | 0.148121 | 5_3:+10723270 | Msa0798120:CDS |
| CCCATAAAATAGAAGGTTAT+TGG | 0.157642 | 5_3:+10729048 | Msa0798120:three_prime_UTR |
| TACAGAACCTATGCTGACTA+TGG | 0.239457 | 5_3:+10728539 | Msa0798120:intron |
| TGCTTTATCTAGGCATTCTT+TGG | 0.262562 | 5_3:-10725832 | None:intergenic |
| TTCTGGAAGGCTTGCTGCTC+AGG | 0.268389 | 5_3:+10723491 | Msa0798120:CDS |
| ACAGATGTGCATACACTCTT+TGG | 0.287821 | 5_3:-10724304 | None:intergenic |
| CCATAAAATAGAAGGTTATT+GGG | 0.308283 | 5_3:+10729049 | Msa0798120:three_prime_UTR |
| AGTGATCATGCAGATAAATA+TGG | 0.316494 | 5_3:+10726015 | Msa0798120:intron |
| CCAATCTCTTATTCAATAGA+AGG | 0.322925 | 5_3:+10723298 | Msa0798120:CDS |
| ATTGAATGTATGAGAGCTTC+TGG | 0.324353 | 5_3:+10723474 | Msa0798120:CDS |
| CACCATTATCAATTATCATT+TGG | 0.331640 | 5_3:-10724249 | None:intergenic |
| TTACTGAAGTGCAGAATAAC+TGG | 0.332632 | 5_3:-10726096 | None:intergenic |
| CGACGTGGAGAAACAATTCC+AGG | 0.340529 | 5_3:-10723357 | None:intergenic |
| GGAGTGGAATACAAGAAAAT+TGG | 0.358013 | 5_3:+10725873 | Msa0798120:CDS |
| CAAGAGATTTGATCTAAAAC+TGG | 0.383240 | 5_3:-10728756 | None:intergenic |
| TGGAGGCTTTGTTATGTCCT+TGG | 0.383263 | 5_3:-10723388 | None:intergenic |
| TACCCGTCTCCTCTTGGTTA+TGG | 0.385751 | 5_3:+10724274 | Msa0798120:CDS |
| CACCAAATGATAATTGATAA+TGG | 0.386505 | 5_3:+10724247 | Msa0798120:CDS |
| CCTTCTATTGAATAAGAGAT+TGG | 0.388798 | 5_3:-10723298 | None:intergenic |
| TCAATAGGTAGAGGGAGATT+AGG | 0.389670 | 5_3:+10728916 | Msa0798120:three_prime_UTR |
| ACAACTTACATTTAGATAAA+CGG | 0.389802 | 5_3:-10724478 | None:intergenic |
| ATACAACACTGTAACTCATT+TGG | 0.393292 | 5_3:-10728811 | None:intergenic |
| CCCCATCAGGTGTTATCAAA+AGG | 0.394761 | 5_3:-10728644 | None:intergenic |
| GGAGGCTTTGTTATGTCCTT+GGG | 0.396406 | 5_3:-10723387 | None:intergenic |
| GTGCAACAGTTTGTTGGCCA+TGG | 0.402876 | 5_3:+10726048 | Msa0798120:CDS |
| ATATCGATATTGCTTTATCT+AGG | 0.407550 | 5_3:-10725842 | None:intergenic |
| CAATTGTCTTTCCACATCAC+TGG | 0.411722 | 5_3:-10728573 | None:intergenic |
| ACCTCAAGCGAACGTGAATC+TGG | 0.417194 | 5_3:-10724352 | None:intergenic |
| CATGCAGATAAATATGGATA+TGG | 0.420071 | 5_3:+10726021 | Msa0798120:CDS |
| TTCATTATAGGTTTGTCAAT+AGG | 0.420180 | 5_3:+10728901 | Msa0798120:three_prime_UTR |
| TGCAACAGTTTGTTGGCCAT+GGG | 0.424319 | 5_3:+10726049 | Msa0798120:CDS |
| TAAAAGAGATAAGTTATAGA+AGG | 0.434539 | 5_3:+10723002 | Msa0798120:five_prime_UTR |
| TATTCTTTCGATCATTAAGA+TGG | 0.439056 | 5_3:+10728947 | Msa0798120:three_prime_UTR |
| CATGAAGTACATGATGAAAA+GGG | 0.445848 | 5_3:+10723450 | Msa0798120:CDS |
| GAACATCTTACTGAATTGTT+CGG | 0.461558 | 5_3:-10725896 | None:intergenic |
| GTCATAATCTCAGCCCCATC+AGG | 0.462099 | 5_3:-10728657 | None:intergenic |
| CAGTGATGTGGAAAGACAAT+TGG | 0.469081 | 5_3:+10728574 | Msa0798120:CDS |
| TGGACAGTTGTAACAGAAGA+TGG | 0.474162 | 5_3:+10728594 | Msa0798120:CDS |
| CAGTTTGTTGGCCATGGGGT+TGG | 0.478716 | 5_3:+10726054 | Msa0798120:CDS |
| CTGTTAAAGTCTTCTTTCAC+CGG | 0.482590 | 5_3:+10723086 | Msa0798120:CDS |
| ACATGAAGTACATGATGAAA+AGG | 0.484431 | 5_3:+10723449 | Msa0798120:CDS |
| CGCAATCCCTGGCGGAACCA+TGG | 0.485545 | 5_3:-10723421 | None:intergenic |
| GCTCAGGTTCTTCAGTATGC+TGG | 0.486769 | 5_3:+10723507 | Msa0798120:CDS |
| GGAATAGTTGAGGAAGTGAT+TGG | 0.489316 | 5_3:-10723136 | None:intergenic |
| GGTGCGTACCCGTCTCCTCT+TGG | 0.492621 | 5_3:+10724268 | Msa0798120:CDS |
| TTATGGGTAAAAGATCCAAA+GGG | 0.495636 | 5_3:-10729032 | None:intergenic |
| GTAAAATCCATGGTTCCGCC+AGG | 0.509922 | 5_3:+10723414 | Msa0798120:CDS |
| CCGTCTCCTCTTGGTTATGG+TGG | 0.510232 | 5_3:+10724277 | Msa0798120:CDS |
| TTAAATCAAACCTTCACGAT+TGG | 0.513964 | 5_3:+10726772 | Msa0798120:CDS |
| GGTGTTGTGCAACAGTTTGT+TGG | 0.514303 | 5_3:+10726042 | Msa0798120:CDS |
| CCCATCAGGTGTTATCAAAA+GGG | 0.517184 | 5_3:-10728643 | None:intergenic |
| ATTTCATCAGTCGTTATGCC+TGG | 0.524254 | 5_3:-10724211 | None:intergenic |
| CAACTATTCCGTTACAGACA+AGG | 0.529560 | 5_3:+10723149 | Msa0798120:CDS |
| ATCGATATGTGCACCTGGAG+TGG | 0.530627 | 5_3:+10725857 | Msa0798120:CDS |
| TCATGTCCACTCGCAATCCC+TGG | 0.530751 | 5_3:-10723432 | None:intergenic |
| AATCGTAAACGCTTGAGACC+TGG | 0.531063 | 5_3:+10723339 | Msa0798120:CDS |
| ATAGGTTTGTCAATAGGTAG+AGG | 0.533551 | 5_3:+10728907 | Msa0798120:three_prime_UTR |
| TTTATGGGTAAAAGATCCAA+AGG | 0.533569 | 5_3:-10729033 | None:intergenic |
| AGGTCTCAAGCGTTTACGAT+TGG | 0.536579 | 5_3:-10723337 | None:intergenic |
| ATAGAAACGCACCTTGACTA+AGG | 0.539069 | 5_3:-10723532 | None:intergenic |
| ATTGGTGGCGTGAGCAGCGT+AGG | 0.544477 | 5_3:-10723118 | None:intergenic |
| TAGGTTTGTCAATAGGTAGA+GGG | 0.545585 | 5_3:+10728908 | Msa0798120:three_prime_UTR |
| TATGAATTGTAGGGTTATCA+TGG | 0.548429 | 5_3:+10724896 | Msa0798120:intron |
| GCCTCCATATGTAAAATCCA+TGG | 0.558800 | 5_3:+10723404 | Msa0798120:CDS |
| GCAGCGTAGGAATCGATCTC+CGG | 0.559965 | 5_3:-10723105 | None:intergenic |
| GCACATGCTTGTTATACCAT+GGG | 0.564897 | 5_3:-10728789 | None:intergenic |
| CCACCATAACCAAGAGGAGA+CGG | 0.567121 | 5_3:-10724277 | None:intergenic |
| ACCAGATTCACGTTCGCTTG+AGG | 0.570704 | 5_3:+10724351 | Msa0798120:CDS |
| AAGAGAAGAGAACATGGCTA+TGG | 0.572057 | 5_3:+10723043 | Msa0798120:exon |
| GGTTGAAACCTTGTCTGTAA+CGG | 0.574103 | 5_3:-10723157 | None:intergenic |
| CACCATAACCAAGAGGAGAC+GGG | 0.579998 | 5_3:-10724276 | None:intergenic |
| CAGTGATGCGCTGCTGCTCG+CGG | 0.583926 | 5_3:-10723066 | None:intergenic |
| TTGCGGGGATGTTGATGATG+AGG | 0.585529 | 5_3:+10724940 | Msa0798120:CDS |
| ACAGAACCTATGCTGACTAT+GGG | 0.591367 | 5_3:+10728540 | Msa0798120:intron |
| AACGTGAATCTGGTATTCCA+TGG | 0.591774 | 5_3:-10724342 | None:intergenic |
| GGCACATGCTTGTTATACCA+TGG | 0.598669 | 5_3:-10728790 | None:intergenic |
| AGAGAGAAGAGAAGAGAACA+TGG | 0.602866 | 5_3:+10723037 | Msa0798120:exon |
| GTATGCTGGCACCTTAGTCA+AGG | 0.603231 | 5_3:+10723521 | Msa0798120:CDS |
| GTGAATGAATGCATTTGCCA+TGG | 0.609251 | 5_3:+10724325 | Msa0798120:CDS |
| GTTCCGCCAGGGATTGCGAG+TGG | 0.613961 | 5_3:+10723426 | Msa0798120:CDS |
| AATGTATGAGAGCTTCTGGA+AGG | 0.615258 | 5_3:+10723478 | Msa0798120:CDS |
| TAAAATCCATGGTTCCGCCA+GGG | 0.622525 | 5_3:+10723415 | Msa0798120:CDS |
| CTCTTGCTGGAAATCACCCA+TGG | 0.623616 | 5_3:+10728773 | Msa0798120:three_prime_UTR |
| GCAATATCGATATGTGCACC+TGG | 0.626501 | 5_3:+10725852 | Msa0798120:CDS |
| ATGCTGCCCATAGTCAGCAT+AGG | 0.627596 | 5_3:-10728546 | None:intergenic |
| TCCACGTCGAAAAGTTCCCA+AGG | 0.628745 | 5_3:+10723371 | Msa0798120:CDS |
| TGTCTGTAACGGAATAGTTG+AGG | 0.629364 | 5_3:-10723146 | None:intergenic |
| GCAGCATCAATCCAGTGATG+TGG | 0.633825 | 5_3:+10728562 | Msa0798120:CDS |
| ATGAAGTACATGATGAAAAG+GGG | 0.636342 | 5_3:+10723451 | Msa0798120:CDS |
| ATAGTTGAGGAAGTGATTGG+TGG | 0.636650 | 5_3:-10723133 | None:intergenic |
| GCAACAGTTTGTTGGCCATG+GGG | 0.649120 | 5_3:+10726050 | Msa0798120:CDS |
| GTTAAGCCAGAAAGTGATCG+AGG | 0.668909 | 5_3:-10723276 | None:intergenic |
| TATGGGTAAAAGATCCAAAG+GGG | 0.673996 | 5_3:-10729031 | None:intergenic |
| ATGGGTAAAAGATCCAAAGG+GGG | 0.707935 | 5_3:-10729030 | None:intergenic |
| GGAAAACCACCATAACCAAG+AGG | 0.708028 | 5_3:-10724283 | None:intergenic |
| TGTCCACTCGCAATCCCTGG+CGG | 0.709523 | 5_3:-10723429 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGTAAAATTATATATCT+TGG | + | chr5_3:10724393-10724412 | Msa0798120:intron | 10.0% |
| !! | ATTGTAAAATTATATATCTT+GGG | + | chr5_3:10724394-10724413 | Msa0798120:intron | 10.0% |
| !!! | TAAGTTGTATAATTTTTTTT+TGG | + | chr5_3:10724493-10724512 | Msa0798120:intron | 10.0% |
| !!! | ATTGGTAAAAATATTAATTT+TGG | + | chr5_3:10725140-10725159 | Msa0798120:intron | 10.0% |
| !! | CAAATAAAATTCATTATATT+TGG | - | chr5_3:10725630-10725649 | None:intergenic | 10.0% |
| !!! | TTATCATTTTTAAAAATTGA+AGG | - | chr5_3:10726255-10726274 | None:intergenic | 10.0% |
| !!! | TCATTTTACAAAAAATTTGA+AGG | + | chr5_3:10722959-10722978 | Msa0798120:five_prime_UTR | 15.0% |
| !! | AATTAAATTGTTGAAATGAT+TGG | + | chr5_3:10724128-10724147 | Msa0798120:intron | 15.0% |
| !!! | TATTTTGTTCTTTTAAAACA+TGG | + | chr5_3:10724713-10724732 | Msa0798120:intron | 15.0% |
| !! | ATTCCAAAACATATAAAAAT+GGG | - | chr5_3:10724820-10724839 | None:intergenic | 15.0% |
| !! | AATTCCAAAACATATAAAAA+TGG | - | chr5_3:10724821-10724840 | None:intergenic | 15.0% |
| !!! | ATTTATGGTTTTATATTTTC+TGG | + | chr5_3:10725536-10725555 | Msa0798120:intron | 15.0% |
| !!! | ATAAATATAGATTTTCAACA+CGG | - | chr5_3:10726195-10726214 | None:intergenic | 15.0% |
| !! | AATATAATATAATATAAGGG+TGG | - | chr5_3:10726588-10726607 | None:intergenic | 15.0% |
| !!! | TTCTTGTTATTTTTATTTTC+AGG | + | chr5_3:10726724-10726743 | Msa0798120:intron | 15.0% |
| !! | ATAACAAAATCTATAAATCT+TGG | - | chr5_3:10728477-10728496 | None:intergenic | 15.0% |
| !!! | ATTTAATTTTTTTCTTTACC+TGG | + | chr5_3:10728509-10728528 | Msa0798120:intron | 15.0% |
| !! | TAAAAGAGATAAGTTATAGA+AGG | + | chr5_3:10723002-10723021 | Msa0798120:five_prime_UTR | 20.0% |
| !! | TAATTGAAAAGAAGAGAAAA+TGG | - | chr5_3:10723201-10723220 | None:intergenic | 20.0% |
| !!! | TATTTTAATTATGATTGCAG+CGG | + | chr5_3:10723761-10723780 | Msa0798120:intron | 20.0% |
| !!! | TTATTTTTACTAGCTTATAG+TGG | - | chr5_3:10723857-10723876 | None:intergenic | 20.0% |
| !! | TATTAACTAACAAACATATG+AGG | + | chr5_3:10724022-10724041 | Msa0798120:intron | 20.0% |
| !!! | TTTACAATTTAAGAGTTTTC+TGG | - | chr5_3:10724382-10724401 | None:intergenic | 20.0% |
| !! | ACAACTTACATTTAGATAAA+CGG | - | chr5_3:10724481-10724500 | None:intergenic | 20.0% |
| !!! | TGTATAATTTTTTTTTGGCA+TGG | + | chr5_3:10724498-10724517 | Msa0798120:intron | 20.0% |
| !!! | TTAATTCATCTAGCTTATTT+TGG | + | chr5_3:10724761-10724780 | Msa0798120:intron | 20.0% |
| !! | AAATGCAGAATTAAATAACA+GGG | - | chr5_3:10725050-10725069 | None:intergenic | 20.0% |
| !! | AAAATGCAGAATTAAATAAC+AGG | - | chr5_3:10725051-10725070 | None:intergenic | 20.0% |
| !!! | TTTACCAATATTTTGAAAAC+TGG | - | chr5_3:10725129-10725148 | None:intergenic | 20.0% |
| !!! | ATTTTGGATTTTAGATTACT+TGG | + | chr5_3:10725156-10725175 | Msa0798120:intron | 20.0% |
| !!! | ATATCTGAAATTCAAAAACT+AGG | - | chr5_3:10725279-10725298 | None:intergenic | 20.0% |
| !! | TAGATATTTATTATCTTAGC+AGG | + | chr5_3:10725386-10725405 | Msa0798120:intron | 20.0% |
| !! | AGATATTTATTATCTTAGCA+GGG | + | chr5_3:10725387-10725406 | Msa0798120:intron | 20.0% |
| !!! | TTTTATATTTTCTGGTCAAT+AGG | + | chr5_3:10725544-10725563 | Msa0798120:intron | 20.0% |
| !! | AACAATTAGAATAAGTTGTA+AGG | - | chr5_3:10725660-10725679 | None:intergenic | 20.0% |
| !!! | CAACTTATTCTAATTGTTTT+TGG | + | chr5_3:10725662-10725681 | Msa0798120:intron | 20.0% |
| !! | CATAACAATCTATATTGTAT+TGG | - | chr5_3:10726810-10726829 | None:intergenic | 20.0% |
| !! | AAATATTGAATTGTGACATT+AGG | - | chr5_3:10727020-10727039 | None:intergenic | 20.0% |
| !!! | ACACTAAAACTTGTTAAAAA+GGG | - | chr5_3:10727434-10727453 | None:intergenic | 20.0% |
| !!! | GAAAATAATGATTTTACTCT+TGG | + | chr5_3:10727577-10727596 | Msa0798120:intron | 20.0% |
| !!! | TCAAAATTTGTAAAGTACTT+TGG | + | chr5_3:10727888-10727907 | Msa0798120:intron | 20.0% |
| !!! | CAAAATTTGTAAAGTACTTT+GGG | + | chr5_3:10727889-10727908 | Msa0798120:intron | 20.0% |
| !! | AGAAGAAGACAAAAAAATAT+AGG | + | chr5_3:10728148-10728167 | Msa0798120:intron | 20.0% |
| !!! | GTTTTTCATATATAGAGTTA+AGG | + | chr5_3:10728352-10728371 | Msa0798120:intron | 20.0% |
| !! | CTTAAGTCTATATATAATCA+TGG | + | chr5_3:10728388-10728407 | Msa0798120:intron | 20.0% |
| !!! | CTACACTTATTTTTCATTAT+AGG | + | chr5_3:10728889-10728908 | Msa0798120:three_prime_UTR | 20.0% |
| ! | AAAGAAGAGAAAATGGAATT+AGG | - | chr5_3:10723194-10723213 | None:intergenic | 25.0% |
| ! | CTTATTCTTCATTCATTCTT+TGG | + | chr5_3:10723222-10723241 | Msa0798120:intron | 25.0% |
| !! | ACATATGAGGTTGTTATTAT+TGG | + | chr5_3:10724035-10724054 | Msa0798120:intron | 25.0% |
| ! | CACCAAATGATAATTGATAA+TGG | + | chr5_3:10724247-10724266 | Msa0798120:CDS | 25.0% |
| ! | CACCATTATCAATTATCATT+TGG | - | chr5_3:10724252-10724271 | None:intergenic | 25.0% |
| !!! | TGACATTTTCTTTTATTTGC+AGG | + | chr5_3:10724428-10724447 | Msa0798120:intron | 25.0% |
| !!! | ATTTTCTTTTATTTGCAGGA+TGG | + | chr5_3:10724432-10724451 | Msa0798120:intron | 25.0% |
| !!! | TTGCCCATTTTTATATGTTT+TGG | + | chr5_3:10724814-10724833 | Msa0798120:intron | 25.0% |
| ! | ATAAAACTTGTGCTTTGATT+TGG | + | chr5_3:10724857-10724876 | Msa0798120:intron | 25.0% |
| ! | AACAAATGGATATGAATTGT+AGG | + | chr5_3:10724886-10724905 | Msa0798120:intron | 25.0% |
| ! | ACAAATGGATATGAATTGTA+GGG | + | chr5_3:10724887-10724906 | Msa0798120:intron | 25.0% |
| !!! | GTTTAATGCACTTTTTGTAA+TGG | + | chr5_3:10725190-10725209 | Msa0798120:intron | 25.0% |
| ! | TTTCATATACTCATTCCAAA+GGG | - | chr5_3:10725330-10725349 | None:intergenic | 25.0% |
| !! | TTTTCATATACTCATTCCAA+AGG | - | chr5_3:10725331-10725350 | None:intergenic | 25.0% |
| ! | CATTCAAAACTTAATACCAT+AGG | - | chr5_3:10725477-10725496 | None:intergenic | 25.0% |
| !!! | ATTAAGTTTTGAATGAGACA+CGG | + | chr5_3:10725482-10725501 | Msa0798120:intron | 25.0% |
| ! | AAACCATAAATGAATACCAA+GGG | - | chr5_3:10725527-10725546 | None:intergenic | 25.0% |
| ! | AAAACCATAAATGAATACCA+AGG | - | chr5_3:10725528-10725547 | None:intergenic | 25.0% |
| !!! | TTGTTTTGTGTTTATATGAG+TGG | + | chr5_3:10725777-10725796 | Msa0798120:intron | 25.0% |
| !! | TGTTTTGTGTTTATATGAGT+GGG | + | chr5_3:10725778-10725797 | Msa0798120:intron | 25.0% |
| ! | ATATCGATATTGCTTTATCT+AGG | - | chr5_3:10725845-10725864 | None:intergenic | 25.0% |
| ! | TTCTGAATTTATGTGGAATA+AGG | - | chr5_3:10725951-10725970 | None:intergenic | 25.0% |
| !!! | TATTTATTTTACTGCTTACG+AGG | + | chr5_3:10726208-10726227 | Msa0798120:intron | 25.0% |
| ! | TTCTTTCACTACATAAAAGT+TGG | + | chr5_3:10726392-10726411 | Msa0798120:intron | 25.0% |
| ! | CTTGTGGAATGTAAAATATA+GGG | - | chr5_3:10726446-10726465 | None:intergenic | 25.0% |
| !! | CTATATTTTACATTCCACAA+GGG | + | chr5_3:10726445-10726464 | Msa0798120:intron | 25.0% |
| ! | TATAACAGTATAAGCTAACA+GGG | - | chr5_3:10726484-10726503 | None:intergenic | 25.0% |
| ! | AAATGAATATTTCCAGAAAG+AGG | - | chr5_3:10726525-10726544 | None:intergenic | 25.0% |
| !! | CGAATTTAAAACTGTTTGTT+TGG | + | chr5_3:10726551-10726570 | Msa0798120:intron | 25.0% |
| ! | GTTTGGATAAAATATGTGAA+CGG | - | chr5_3:10726627-10726646 | None:intergenic | 25.0% |
| ! | AAAAAAATTACCAATCGTGA+AGG | - | chr5_3:10726785-10726804 | None:intergenic | 25.0% |
| !!! | GACACTAAAACTTGTTAAAA+AGG | - | chr5_3:10727435-10727454 | None:intergenic | 25.0% |
| ! | AAAGAGCTCAATTTCAATTT+GGG | - | chr5_3:10727717-10727736 | None:intergenic | 25.0% |
| ! | TAAAGAGCTCAATTTCAATT+TGG | - | chr5_3:10727718-10727737 | None:intergenic | 25.0% |
| ! | AATAAGAAAGTAGAGATTGA+GGG | - | chr5_3:10727822-10727841 | None:intergenic | 25.0% |
| ! | AAATAAGAAAGTAGAGATTG+AGG | - | chr5_3:10727823-10727842 | None:intergenic | 25.0% |
| !!! | TAAACTTTTTGAAAACCCAT+CGG | + | chr5_3:10727943-10727962 | Msa0798120:intron | 25.0% |
| !!! | TTTTCTTTCCCTTATTTGTT+AGG | + | chr5_3:10728007-10728026 | Msa0798120:intron | 25.0% |
| ! | AACATACACCTAACAAATAA+GGG | - | chr5_3:10728018-10728037 | None:intergenic | 25.0% |
| ! | AAACATACACCTAACAAATA+AGG | - | chr5_3:10728019-10728038 | None:intergenic | 25.0% |
| ! | ATTAAGAGTTATTGCATTAG+AGG | + | chr5_3:10728124-10728143 | Msa0798120:intron | 25.0% |
| ! | AATATAGGCTAAAGATTTAG+AGG | + | chr5_3:10728163-10728182 | Msa0798120:intron | 25.0% |
| ! | TATAGACTTAAGAGTCTATT+AGG | - | chr5_3:10728380-10728399 | None:intergenic | 25.0% |
| ! | ACAAAATCTATAAATCTTGG+AGG | - | chr5_3:10728474-10728493 | None:intergenic | 25.0% |
| ! | TTCATTATAGGTTTGTCAAT+AGG | + | chr5_3:10728901-10728920 | Msa0798120:three_prime_UTR | 25.0% |
| ! | TATTCTTTCGATCATTAAGA+TGG | + | chr5_3:10728947-10728966 | Msa0798120:three_prime_UTR | 25.0% |
| !! | TCTTTTACCCATAAAATAGA+AGG | + | chr5_3:10729041-10729060 | Msa0798120:three_prime_UTR | 25.0% |
| !! | CCAATAACCTTCTATTTTAT+GGG | - | chr5_3:10729051-10729070 | None:intergenic | 25.0% |
| ! | CCATAAAATAGAAGGTTATT+GGG | + | chr5_3:10729049-10729068 | Msa0798120:three_prime_UTR | 25.0% |
| AGAAAATGGAATTAGGAAGA+AGG | - | chr5_3:10723187-10723206 | None:intergenic | 30.0% | |
| CCTTCTATTGAATAAGAGAT+TGG | - | chr5_3:10723301-10723320 | None:intergenic | 30.0% | |
| CCAATCTCTTATTCAATAGA+AGG | + | chr5_3:10723298-10723317 | Msa0798120:CDS | 30.0% | |
| ACATGAAGTACATGATGAAA+AGG | + | chr5_3:10723449-10723468 | Msa0798120:CDS | 30.0% | |
| CATGAAGTACATGATGAAAA+GGG | + | chr5_3:10723450-10723469 | Msa0798120:CDS | 30.0% | |
| ATGAAGTACATGATGAAAAG+GGG | + | chr5_3:10723451-10723470 | Msa0798120:CDS | 30.0% | |
| TAAACCAGCTTATATGCTAT+CGG | - | chr5_3:10723624-10723643 | None:intergenic | 30.0% | |
| GTGATTGAATTTGTAGTGTT+TGG | + | chr5_3:10723666-10723685 | Msa0798120:intron | 30.0% | |
| GTAGTGTTTGGTAAATTTAG+CGG | + | chr5_3:10723678-10723697 | Msa0798120:intron | 30.0% | |
| ATGACTAAAAAAGACCCATT+TGG | - | chr5_3:10723909-10723928 | None:intergenic | 30.0% | |
| ! | GTTGTTATTATTGGTTAGTG+CGG | + | chr5_3:10724044-10724063 | Msa0798120:intron | 30.0% |
| ! | TTGTTATTATTGGTTAGTGC+GGG | + | chr5_3:10724045-10724064 | Msa0798120:intron | 30.0% |
| ! | CAATTTAAGAGTTTTCTGGA+AGG | - | chr5_3:10724378-10724397 | None:intergenic | 30.0% |
| !!! | TAATTTTTTTTTGGCATGGC+AGG | + | chr5_3:10724502-10724521 | Msa0798120:intron | 30.0% |
| !!! | AATTTTTTTTTGGCATGGCA+GGG | + | chr5_3:10724503-10724522 | Msa0798120:intron | 30.0% |
| !!! | GCTTATTTTTGCTTTTTGTC+CGG | + | chr5_3:10724527-10724546 | Msa0798120:intron | 30.0% |
| !!! | CTTATTTTTGCTTTTTGTCC+GGG | + | chr5_3:10724528-10724547 | Msa0798120:intron | 30.0% |
| !! | TGATTTGGTGATTGAACAAA+TGG | + | chr5_3:10724872-10724891 | Msa0798120:intron | 30.0% |
| TATGAATTGTAGGGTTATCA+TGG | + | chr5_3:10724896-10724915 | Msa0798120:intron | 30.0% | |
| ! | CAGTCCAGTTTTCAAAATAT+TGG | + | chr5_3:10725122-10725141 | Msa0798120:intron | 30.0% |
| GAATTCATTATGAAAACCTG+AGG | + | chr5_3:10725212-10725231 | Msa0798120:intron | 30.0% | |
| TTCAGATATTGTGCTAACAA+AGG | + | chr5_3:10725290-10725309 | Msa0798120:intron | 30.0% | |
| ! | GAATGCTTTTATATTCCCTT+TGG | + | chr5_3:10725312-10725331 | Msa0798120:intron | 30.0% |
| AGCTACTCTACTGTATTATA+TGG | + | chr5_3:10725358-10725377 | Msa0798120:intron | 30.0% | |
| AATACCATAGGATATTCTAC+TGG | - | chr5_3:10725465-10725484 | None:intergenic | 30.0% | |
| !!! | TTAAGTTTTGAATGAGACAC+GGG | + | chr5_3:10725483-10725502 | Msa0798120:intron | 30.0% |
| TATCCCTTGGTATTCATTTA+TGG | + | chr5_3:10725521-10725540 | Msa0798120:intron | 30.0% | |
| ATACAATTTCCAGGAATAAG+TGG | - | chr5_3:10725577-10725596 | None:intergenic | 30.0% | |
| TTATGGGATATACAATTTCC+AGG | - | chr5_3:10725586-10725605 | None:intergenic | 30.0% | |
| TTTGGTAAAACGTTAGTCAA+CGG | - | chr5_3:10725612-10725631 | None:intergenic | 30.0% | |
| TAAACACAAAACAAATGACG+AGG | - | chr5_3:10725771-10725790 | None:intergenic | 30.0% | |
| ! | GTTTTGTGTTTATATGAGTG+GGG | + | chr5_3:10725779-10725798 | Msa0798120:intron | 30.0% |
| GACCTGTATCAATCAAATAA+GGG | - | chr5_3:10725811-10725830 | None:intergenic | 30.0% | |
| TGACCTGTATCAATCAAATA+AGG | - | chr5_3:10725812-10725831 | None:intergenic | 30.0% | |
| GAACATCTTACTGAATTGTT+CGG | - | chr5_3:10725899-10725918 | None:intergenic | 30.0% | |
| ! | AGAGGTTTTCTGAATTTATG+TGG | - | chr5_3:10725958-10725977 | None:intergenic | 30.0% |
| ACATAAATTCAGAAAACCTC+TGG | + | chr5_3:10725957-10725976 | Msa0798120:intron | 30.0% | |
| AGTGATCATGCAGATAAATA+TGG | + | chr5_3:10726015-10726034 | Msa0798120:intron | 30.0% | |
| CATGCAGATAAATATGGATA+TGG | + | chr5_3:10726021-10726040 | Msa0798120:CDS | 30.0% | |
| ATGATATTGTGCATAGACTA+AGG | + | chr5_3:10726334-10726353 | Msa0798120:intron | 30.0% | |
| TGATATTGTGCATAGACTAA+GGG | + | chr5_3:10726335-10726354 | Msa0798120:intron | 30.0% | |
| GGCTTCTTTGTAAAGTTTAA+TGG | - | chr5_3:10726425-10726444 | None:intergenic | 30.0% | |
| CCTTGTGGAATGTAAAATAT+AGG | - | chr5_3:10726447-10726466 | None:intergenic | 30.0% | |
| ! | CCTATATTTTACATTCCACA+AGG | + | chr5_3:10726444-10726463 | Msa0798120:intron | 30.0% |
| GTATAACAGTATAAGCTAAC+AGG | - | chr5_3:10726485-10726504 | None:intergenic | 30.0% | |
| ACAAACATAACTCTGAATAG+AGG | - | chr5_3:10726696-10726715 | None:intergenic | 30.0% | |
| !! | TTTTCAGGAAACAATGAAGA+TGG | + | chr5_3:10726739-10726758 | Msa0798120:intron | 30.0% |
| TTAAATCAAACCTTCACGAT+TGG | + | chr5_3:10726772-10726791 | Msa0798120:CDS | 30.0% | |
| ATGATTATTGTTTGCAAAGC+TGG | + | chr5_3:10726841-10726860 | Msa0798120:intron | 30.0% | |
| !! | TTGTTTTCTGTTGCATTGAT+TGG | + | chr5_3:10726885-10726904 | Msa0798120:intron | 30.0% |
| !!! | TGTTTTCTGTTGCATTGATT+GGG | + | chr5_3:10726886-10726905 | Msa0798120:intron | 30.0% |
| CAAATTTAAATTTGGCAGTG+TGG | - | chr5_3:10727206-10727225 | None:intergenic | 30.0% | |
| CACACTGCCAAATTTAAATT+TGG | + | chr5_3:10727204-10727223 | Msa0798120:intron | 30.0% | |
| GCAGCTTCCAAATTTAAATT+TGG | - | chr5_3:10727214-10727233 | None:intergenic | 30.0% | |
| AAATAAGTGGCTTACATACA+TGG | - | chr5_3:10727281-10727300 | None:intergenic | 30.0% | |
| ! | TGTATGTAAGCCACTTATTT+TGG | + | chr5_3:10727281-10727300 | Msa0798120:intron | 30.0% |
| CACAATTACTCCAAAATAAG+TGG | - | chr5_3:10727294-10727313 | None:intergenic | 30.0% | |
| AACTGCCTTTGAATTTACAT+AGG | + | chr5_3:10727317-10727336 | Msa0798120:intron | 30.0% | |
| CTTAGCCTATGTAAATTCAA+AGG | - | chr5_3:10727325-10727344 | None:intergenic | 30.0% | |
| !!! | CTAACTGTTTTAATTGTGGA+TGG | + | chr5_3:10727456-10727475 | Msa0798120:intron | 30.0% |
| ! | TCAGATCATTTTCACCTTAA+AGG | + | chr5_3:10727670-10727689 | Msa0798120:intron | 30.0% |
| !! | TTGTAAAGTACTTTGGGATT+TGG | + | chr5_3:10727895-10727914 | Msa0798120:intron | 30.0% |
| !! | TGTAAAGTACTTTGGGATTT+GGG | + | chr5_3:10727896-10727915 | Msa0798120:intron | 30.0% |
| TAGTTCATGATGTCTATATG+AGG | + | chr5_3:10727966-10727985 | Msa0798120:intron | 30.0% | |
| AGTTCATGATGTCTATATGA+GGG | + | chr5_3:10727967-10727986 | Msa0798120:intron | 30.0% | |
| ! | ACAATGTTGCATTTTATGAG+CGG | + | chr5_3:10728082-10728101 | Msa0798120:intron | 30.0% |
| CGATCATAAATCATGTCTAT+AGG | - | chr5_3:10728200-10728219 | None:intergenic | 30.0% | |
| !! | ATCACATTTTGAAGAAACTG+TGG | + | chr5_3:10728321-10728340 | Msa0798120:intron | 30.0% |
| CTCACTAAAGCAAGTTTAAA+GGG | - | chr5_3:10728443-10728462 | None:intergenic | 30.0% | |
| TCTCACTAAAGCAAGTTTAA+AGG | - | chr5_3:10728444-10728463 | None:intergenic | 30.0% | |
| TAGGTTCTGTAAAATTTACC+AGG | - | chr5_3:10728530-10728549 | None:intergenic | 30.0% | |
| ! | CAAGAGATTTGATCTAAAAC+TGG | - | chr5_3:10728759-10728778 | None:intergenic | 30.0% |
| ! | TTTTAGATCAAATCTCTTGC+TGG | + | chr5_3:10728760-10728779 | Msa0798120:three_prime_UTR | 30.0% |
| ATACAACACTGTAACTCATT+TGG | - | chr5_3:10728814-10728833 | None:intergenic | 30.0% | |
| TTATGGGTAAAAGATCCAAA+GGG | - | chr5_3:10729035-10729054 | None:intergenic | 30.0% | |
| TTTATGGGTAAAAGATCCAA+AGG | - | chr5_3:10729036-10729055 | None:intergenic | 30.0% | |
| CCCATAAAATAGAAGGTTAT+TGG | + | chr5_3:10729048-10729067 | Msa0798120:three_prime_UTR | 30.0% | |
| ! | CCCAATAACCTTCTATTTTA+TGG | - | chr5_3:10729052-10729071 | None:intergenic | 30.0% |
| CTGTTAAAGTCTTCTTTCAC+CGG | + | chr5_3:10723086-10723105 | Msa0798120:CDS | 35.0% | |
| !! | CTTCATTCATTCTTTGGAAC+AGG | + | chr5_3:10723228-10723247 | Msa0798120:intron | 35.0% |
| ! | ACCATGGATTTTACATATGG+AGG | - | chr5_3:10723408-10723427 | None:intergenic | 35.0% |
| ! | GGAACCATGGATTTTACATA+TGG | - | chr5_3:10723411-10723430 | None:intergenic | 35.0% |
| ATTGAATGTATGAGAGCTTC+TGG | + | chr5_3:10723474-10723493 | Msa0798120:CDS | 35.0% | |
| TCGGCTATAGACTAACTTAT+CGG | - | chr5_3:10723605-10723624 | None:intergenic | 35.0% | |
| ATTCAATCACCTAGCTTATC+TGG | - | chr5_3:10723656-10723675 | None:intergenic | 35.0% | |
| TTACAATCCTAAGACACGTA+GGG | - | chr5_3:10723992-10724011 | None:intergenic | 35.0% | |
| ATTACAATCCTAAGACACGT+AGG | - | chr5_3:10723993-10724012 | None:intergenic | 35.0% | |
| CAACAATATAGCACAAGAAG+AGG | - | chr5_3:10724648-10724667 | None:intergenic | 35.0% | |
| CTCTTCTTGTGCTATATTGT+TGG | + | chr5_3:10724646-10724665 | Msa0798120:intron | 35.0% | |
| TTCTTGTGCTATATTGTTGG+AGG | + | chr5_3:10724649-10724668 | Msa0798120:intron | 35.0% | |
| TCTTGTGCTATATTGTTGGA+GGG | + | chr5_3:10724650-10724669 | Msa0798120:intron | 35.0% | |
| ! | ACATCGACAACTTTCTTTTG+CGG | + | chr5_3:10724923-10724942 | Msa0798120:CDS | 35.0% |
| TGAGGCTAAAAAACTAGTTC+AGG | + | chr5_3:10724958-10724977 | Msa0798120:CDS | 35.0% | |
| ! | GGATTTTAGATTACTTGGTC+TGG | + | chr5_3:10725161-10725180 | Msa0798120:intron | 35.0% |
| ! | GATAGCTTTACAGTTTACGT+TGG | - | chr5_3:10725443-10725462 | None:intergenic | 35.0% |
| CTATCCAGTAGAATATCCTA+TGG | + | chr5_3:10725458-10725477 | Msa0798120:intron | 35.0% | |
| !!! | TAAGTTTTGAATGAGACACG+GGG | + | chr5_3:10725484-10725503 | Msa0798120:intron | 35.0% |
| GTATAAGGAAGAATATCCCT+TGG | + | chr5_3:10725508-10725527 | Msa0798120:intron | 35.0% | |
| !! | CGTTAGTCAACGGATTTTAT+GGG | - | chr5_3:10725602-10725621 | None:intergenic | 35.0% |
| !! | ACGTTAGTCAACGGATTTTA+TGG | - | chr5_3:10725603-10725622 | None:intergenic | 35.0% |
| TGGATGTTGAGATACTATTC+TGG | + | chr5_3:10725682-10725701 | Msa0798120:intron | 35.0% | |
| ! | CTCCCTTATTTGATTGATAC+AGG | + | chr5_3:10725806-10725825 | Msa0798120:intron | 35.0% |
| TGCTTTATCTAGGCATTCTT+TGG | - | chr5_3:10725835-10725854 | None:intergenic | 35.0% | |
| ! | ATTTTCTTGTATTCCACTCC+AGG | - | chr5_3:10725873-10725892 | None:intergenic | 35.0% |
| GGAGTGGAATACAAGAAAAT+TGG | + | chr5_3:10725873-10725892 | Msa0798120:CDS | 35.0% | |
| GAATAAGGAAATGCAGGAAT+GGG | - | chr5_3:10725936-10725955 | None:intergenic | 35.0% | |
| TATGTGGAATAAGGAAATGC+AGG | - | chr5_3:10725942-10725961 | None:intergenic | 35.0% | |
| TGATGAATCATATAGTCCAG+AGG | - | chr5_3:10725976-10725995 | None:intergenic | 35.0% | |
| TTACTGAAGTGCAGAATAAC+TGG | - | chr5_3:10726099-10726118 | None:intergenic | 35.0% | |
| GATATTGTGCATAGACTAAG+GGG | + | chr5_3:10726336-10726355 | Msa0798120:intron | 35.0% | |
| TGATATATTCCACCTCTTTC+TGG | + | chr5_3:10726510-10726529 | Msa0798120:intron | 35.0% | |
| TGAATATTTCCAGAAAGAGG+TGG | - | chr5_3:10726522-10726541 | None:intergenic | 35.0% | |
| !!! | GGCAAAAGTATTTTGAGGTT+TGG | - | chr5_3:10726644-10726663 | None:intergenic | 35.0% |
| AGAAAAGCAATCACATCTGA+CGG | - | chr5_3:10726666-10726685 | None:intergenic | 35.0% | |
| AAGGAAAGCGAAATGATGAA+AGG | - | chr5_3:10727066-10727085 | None:intergenic | 35.0% | |
| AGGAAAGAGAGAATTTCTCA+AGG | - | chr5_3:10727085-10727104 | None:intergenic | 35.0% | |
| GTTGAAATTTCCAAGTGGAA+AGG | - | chr5_3:10727105-10727124 | None:intergenic | 35.0% | |
| ! | TTGGACGTGTGAACTTTTAT+TGG | - | chr5_3:10727175-10727194 | None:intergenic | 35.0% |
| AGTTCACACGTCCAAAAATA+TGG | + | chr5_3:10727180-10727199 | Msa0798120:intron | 35.0% | |
| !!! | GTCGCTAACTGTTTTAATTG+TGG | + | chr5_3:10727452-10727471 | Msa0798120:intron | 35.0% |
| TTGTGGATGGTACTATATAG+AGG | + | chr5_3:10727469-10727488 | Msa0798120:intron | 35.0% | |
| TGTGGATGGTACTATATAGA+GGG | + | chr5_3:10727470-10727489 | Msa0798120:intron | 35.0% | |
| TATATAGAGGGTAGTGAAAG+TGG | + | chr5_3:10727482-10727501 | Msa0798120:intron | 35.0% | |
| CTAGCGCTTGGTAAAAATAA+TGG | + | chr5_3:10727546-10727565 | Msa0798120:intron | 35.0% | |
| TCTTGGTATGATTGAACAGT+AGG | + | chr5_3:10727594-10727613 | Msa0798120:intron | 35.0% | |
| CTTGGTATGATTGAACAGTA+GGG | + | chr5_3:10727595-10727614 | Msa0798120:intron | 35.0% | |
| TGAAAATGATCTGACAGTGA+AGG | - | chr5_3:10727664-10727683 | None:intergenic | 35.0% | |
| ! | TATCTGCTACTTCTCCTTTA+AGG | - | chr5_3:10727687-10727706 | None:intergenic | 35.0% |
| GATTGAGGGAATGGAAAATT+TGG | - | chr5_3:10727808-10727827 | None:intergenic | 35.0% | |
| TATAAGCTAAAGCAAGTTCC+AGG | + | chr5_3:10727842-10727861 | Msa0798120:intron | 35.0% | |
| !! | TTTTGAGAACATGACACCAA+GGG | - | chr5_3:10727874-10727893 | None:intergenic | 35.0% |
| !! | ATTTTGAGAACATGACACCA+AGG | - | chr5_3:10727875-10727894 | None:intergenic | 35.0% |
| !! | GTAAAGTACTTTGGGATTTG+GGG | + | chr5_3:10727897-10727916 | Msa0798120:intron | 35.0% |
| GCGGAAATATTAGATGAGAT+AGG | + | chr5_3:10728101-10728120 | Msa0798120:intron | 35.0% | |
| CATGTCTATAGGCAAACTAT+TGG | - | chr5_3:10728189-10728208 | None:intergenic | 35.0% | |
| AACAAAACCTTATTCCAGCA+GGG | - | chr5_3:10728261-10728280 | None:intergenic | 35.0% | |
| ATAGGTTTGTCAATAGGTAG+AGG | + | chr5_3:10728907-10728926 | Msa0798120:three_prime_UTR | 35.0% | |
| TAGGTTTGTCAATAGGTAGA+GGG | + | chr5_3:10728908-10728927 | Msa0798120:three_prime_UTR | 35.0% | |
| TATGGGTAAAAGATCCAAAG+GGG | - | chr5_3:10729034-10729053 | None:intergenic | 35.0% | |
| AGAGAGAAGAGAAGAGAACA+TGG | + | chr5_3:10723037-10723056 | Msa0798120:exon | 40.0% | |
| AAGAGAAGAGAACATGGCTA+TGG | + | chr5_3:10723043-10723062 | Msa0798120:exon | 40.0% | |
| ATAGTTGAGGAAGTGATTGG+TGG | - | chr5_3:10723136-10723155 | None:intergenic | 40.0% | |
| GGAATAGTTGAGGAAGTGAT+TGG | - | chr5_3:10723139-10723158 | None:intergenic | 40.0% | |
| ! | TGTCTGTAACGGAATAGTTG+AGG | - | chr5_3:10723149-10723168 | None:intergenic | 40.0% |
| CAACTATTCCGTTACAGACA+AGG | + | chr5_3:10723149-10723168 | Msa0798120:CDS | 40.0% | |
| GGTTGAAACCTTGTCTGTAA+CGG | - | chr5_3:10723160-10723179 | None:intergenic | 40.0% | |
| TGGAATTAGGAAGAAGGAGA+AGG | - | chr5_3:10723181-10723200 | None:intergenic | 40.0% | |
| GCCTCCATATGTAAAATCCA+TGG | + | chr5_3:10723404-10723423 | Msa0798120:CDS | 40.0% | |
| AATGTATGAGAGCTTCTGGA+AGG | + | chr5_3:10723478-10723497 | Msa0798120:CDS | 40.0% | |
| ATAGAAACGCACCTTGACTA+AGG | - | chr5_3:10723535-10723554 | None:intergenic | 40.0% | |
| TATATCATCCTTGAAGCGAG+TGG | - | chr5_3:10723570-10723589 | None:intergenic | 40.0% | |
| ATAGCCGATAGCATATAAGC+TGG | + | chr5_3:10723617-10723636 | Msa0798120:intron | 40.0% | |
| TAGCTGATACCAGATAAGCT+AGG | + | chr5_3:10723644-10723663 | Msa0798120:intron | 40.0% | |
| AAATAACCTATAAGCTCGCG+AGG | + | chr5_3:10723871-10723890 | Msa0798120:intron | 40.0% | |
| AGGAAGTAACGGTTACCAAA+TGG | + | chr5_3:10723891-10723910 | Msa0798120:intron | 40.0% | |
| GGAAGTAACGGTTACCAAAT+GGG | + | chr5_3:10723892-10723911 | Msa0798120:intron | 40.0% | |
| TAAGACACGTAGGGTGTATT+TGG | - | chr5_3:10723983-10724002 | None:intergenic | 40.0% | |
| AAATACACCCTACGTGTCTT+AGG | + | chr5_3:10723982-10724001 | Msa0798120:intron | 40.0% | |
| ! | TTATTGGTTAGTGCGGGAAA+AGG | + | chr5_3:10724051-10724070 | Msa0798120:intron | 40.0% |
| ! | TTTAACTTCTGTTGACAGCC+AGG | + | chr5_3:10724193-10724212 | Msa0798120:intron | 40.0% |
| ATTTCATCAGTCGTTATGCC+TGG | - | chr5_3:10724214-10724233 | None:intergenic | 40.0% | |
| ACAGATGTGCATACACTCTT+TGG | - | chr5_3:10724307-10724326 | None:intergenic | 40.0% | |
| GTGAATGAATGCATTTGCCA+TGG | + | chr5_3:10724325-10724344 | Msa0798120:CDS | 40.0% | |
| AACGTGAATCTGGTATTCCA+TGG | - | chr5_3:10724345-10724364 | None:intergenic | 40.0% | |
| !!! | ATTTTTGCTTTTTGTCCGGG+TGG | + | chr5_3:10724531-10724550 | Msa0798120:intron | 40.0% |
| !!! | TTTTTGCTTTTTGTCCGGGT+GGG | + | chr5_3:10724532-10724551 | Msa0798120:intron | 40.0% |
| CTTGTGCTATATTGTTGGAG+GGG | + | chr5_3:10724651-10724670 | Msa0798120:intron | 40.0% | |
| ! | CATCGACAACTTTCTTTTGC+GGG | + | chr5_3:10724924-10724943 | Msa0798120:CDS | 40.0% |
| ! | ATCGACAACTTTCTTTTGCG+GGG | + | chr5_3:10724925-10724944 | Msa0798120:CDS | 40.0% |
| TCGTTGGCATGAAGATAAAC+TGG | - | chr5_3:10724986-10725005 | None:intergenic | 40.0% | |
| GTTTATCTTCATGCCAACGA+TGG | + | chr5_3:10724986-10725005 | Msa0798120:intron | 40.0% | |
| TGAACCGTGAACTAGTTCAA+TGG | + | chr5_3:10725098-10725117 | Msa0798120:intron | 40.0% | |
| CTGACCATTGAACTAGTTCA+CGG | - | chr5_3:10725105-10725124 | None:intergenic | 40.0% | |
| AACCTGAGGAATTACAGAGA+AGG | + | chr5_3:10725226-10725245 | Msa0798120:intron | 40.0% | |
| ACCTGAGGAATTACAGAGAA+GGG | + | chr5_3:10725227-10725246 | Msa0798120:intron | 40.0% | |
| GGGTCTAAATCCTTAGAGTA+AGG | + | chr5_3:10725248-10725267 | Msa0798120:intron | 40.0% | |
| CTAGGTAAGTCCTTACTCTA+AGG | - | chr5_3:10725261-10725280 | None:intergenic | 40.0% | |
| GGAATGGGAGAACAAATGAT+AGG | - | chr5_3:10725921-10725940 | None:intergenic | 40.0% | |
| GGAATAAGGAAATGCAGGAA+TGG | - | chr5_3:10725937-10725956 | None:intergenic | 40.0% | |
| TTCCACAAGGGAAAAACCAA+AGG | + | chr5_3:10726457-10726476 | Msa0798120:intron | 40.0% | |
| TATAAGCTAACAGGGACCTT+TGG | - | chr5_3:10726476-10726495 | None:intergenic | 40.0% | |
| !!! | TGACGGGCAAAAGTATTTTG+AGG | - | chr5_3:10726649-10726668 | None:intergenic | 40.0% |
| GAAAAGCAATCACATCTGAC+GGG | - | chr5_3:10726665-10726684 | None:intergenic | 40.0% | |
| TTCTCTCTTTCCTTTCCACT+TGG | + | chr5_3:10727092-10727111 | Msa0798120:intron | 40.0% | |
| GCAAGGTTGAAATTTCCAAG+TGG | - | chr5_3:10727110-10727129 | None:intergenic | 40.0% | |
| CCTGTTTATTAAGCTACGCA+AGG | - | chr5_3:10727127-10727146 | None:intergenic | 40.0% | |
| CCTTGCGTAGCTTAATAAAC+AGG | + | chr5_3:10727124-10727143 | Msa0798120:intron | 40.0% | |
| GATACTACCCACATACCATA+TGG | + | chr5_3:10727245-10727264 | Msa0798120:intron | 40.0% | |
| TACCCACATACCATATGGAT+AGG | + | chr5_3:10727250-10727269 | Msa0798120:intron | 40.0% | |
| TGCCTATCCATATGGTATGT+GGG | - | chr5_3:10727255-10727274 | None:intergenic | 40.0% | |
| ATGCCTATCCATATGGTATG+TGG | - | chr5_3:10727256-10727275 | None:intergenic | 40.0% | |
| AATTGCAACAGCTCAGATGT+GGG | + | chr5_3:10727372-10727391 | Msa0798120:intron | 40.0% | |
| ! | TTTTACCAAGCGCTAGATCA+GGG | - | chr5_3:10727542-10727561 | None:intergenic | 40.0% |
| ! | TTTTTACCAAGCGCTAGATC+AGG | - | chr5_3:10727543-10727562 | None:intergenic | 40.0% |
| AATGATCTGACAGTGAAGGA+TGG | - | chr5_3:10727660-10727679 | None:intergenic | 40.0% | |
| AGGAGAAGTAGCAGATATTG+TGG | + | chr5_3:10727690-10727709 | Msa0798120:intron | 40.0% | |
| GAAAGTAGAGATTGAGGGAA+TGG | - | chr5_3:10727817-10727836 | None:intergenic | 40.0% | |
| AAGTTCCAGGAATATACCCT+TGG | + | chr5_3:10727855-10727874 | Msa0798120:intron | 40.0% | |
| AGACATCATGAACTACCGAT+GGG | - | chr5_3:10727961-10727980 | None:intergenic | 40.0% | |
| TAGACATCATGAACTACCGA+TGG | - | chr5_3:10727962-10727981 | None:intergenic | 40.0% | |
| ACAAAACCTTATTCCAGCAG+GGG | - | chr5_3:10728260-10728279 | None:intergenic | 40.0% | |
| CAACAAAACCTTATTCCAGC+AGG | - | chr5_3:10728262-10728281 | None:intergenic | 40.0% | |
| ! | TACAGAACCTATGCTGACTA+TGG | + | chr5_3:10728539-10728558 | Msa0798120:intron | 40.0% |
| ! | ACAGAACCTATGCTGACTAT+GGG | + | chr5_3:10728540-10728559 | Msa0798120:intron | 40.0% |
| CAATTGTCTTTCCACATCAC+TGG | - | chr5_3:10728576-10728595 | None:intergenic | 40.0% | |
| CAGTGATGTGGAAAGACAAT+TGG | + | chr5_3:10728574-10728593 | Msa0798120:CDS | 40.0% | |
| TGGACAGTTGTAACAGAAGA+TGG | + | chr5_3:10728594-10728613 | Msa0798120:CDS | 40.0% | |
| !! | ACCCTTTTGATAACACCTGA+TGG | + | chr5_3:10728642-10728661 | Msa0798120:CDS | 40.0% |
| ! | CCCATCAGGTGTTATCAAAA+GGG | - | chr5_3:10728646-10728665 | None:intergenic | 40.0% |
| !! | CCCTTTTGATAACACCTGAT+GGG | + | chr5_3:10728643-10728662 | Msa0798120:CDS | 40.0% |
| !! | CCTTTTGATAACACCTGATG+GGG | + | chr5_3:10728644-10728663 | Msa0798120:CDS | 40.0% |
| !! | GCACATGCTTGTTATACCAT+GGG | - | chr5_3:10728792-10728811 | None:intergenic | 40.0% |
| TCAATAGGTAGAGGGAGATT+AGG | + | chr5_3:10728916-10728935 | Msa0798120:three_prime_UTR | 40.0% | |
| ATGGGTAAAAGATCCAAAGG+GGG | - | chr5_3:10729033-10729052 | None:intergenic | 40.0% | |
| CAGTTACCTCGATCACTTTC+TGG | + | chr5_3:10723270-10723289 | Msa0798120:CDS | 45.0% | |
| GTTAAGCCAGAAAGTGATCG+AGG | - | chr5_3:10723279-10723298 | None:intergenic | 45.0% | |
| AGGTCTCAAGCGTTTACGAT+TGG | - | chr5_3:10723340-10723359 | None:intergenic | 45.0% | |
| AATCGTAAACGCTTGAGACC+TGG | + | chr5_3:10723339-10723358 | Msa0798120:CDS | 45.0% | |
| !! | GGAGGCTTTGTTATGTCCTT+GGG | - | chr5_3:10723390-10723409 | None:intergenic | 45.0% |
| !! | TGGAGGCTTTGTTATGTCCT+TGG | - | chr5_3:10723391-10723410 | None:intergenic | 45.0% |
| TAAAATCCATGGTTCCGCCA+GGG | + | chr5_3:10723415-10723434 | Msa0798120:CDS | 45.0% | |
| !! | CTTTTTCACCACTCGCTTCA+AGG | + | chr5_3:10723559-10723578 | Msa0798120:intron | 45.0% |
| TTACTTCCTCGCGAGCTTAT+AGG | - | chr5_3:10723880-10723899 | None:intergenic | 45.0% | |
| ATAAGCTCGCGAGGAAGTAA+CGG | + | chr5_3:10723880-10723899 | Msa0798120:intron | 45.0% | |
| GGAAAACCACCATAACCAAG+AGG | - | chr5_3:10724286-10724305 | None:intergenic | 45.0% | |
| !!! | TTTTGCTTTTTGTCCGGGTG+GGG | + | chr5_3:10724533-10724552 | Msa0798120:intron | 45.0% |
| ACTACTGTACTACTGAGACG+AGG | - | chr5_3:10724599-10724618 | None:intergenic | 45.0% | |
| ! | GGACATAAGCGTTGTAAGCA+GGG | - | chr5_3:10724627-10724646 | None:intergenic | 45.0% |
| ! | AGGACATAAGCGTTGTAAGC+AGG | - | chr5_3:10724628-10724647 | None:intergenic | 45.0% |
| TGCTATATTGTTGGAGGGGA+CGG | + | chr5_3:10724655-10724674 | Msa0798120:intron | 45.0% | |
| AATAACAGGGCACAGACGTA+TGG | - | chr5_3:10725037-10725056 | None:intergenic | 45.0% | |
| CCTGAGGAATTACAGAGAAG+GGG | + | chr5_3:10725228-10725247 | Msa0798120:intron | 45.0% | |
| TAGCAGGGCAGTAAGTAACT+AGG | + | chr5_3:10725402-10725421 | Msa0798120:intron | 45.0% | |
| AGTAACTAGGCCTACAGTAC+TGG | + | chr5_3:10725415-10725434 | Msa0798120:intron | 45.0% | |
| AATGAGACACGGGGTGTATA+AGG | + | chr5_3:10725493-10725512 | Msa0798120:intron | 45.0% | |
| GGAGATGTACCACTTATTCC+TGG | + | chr5_3:10725565-10725584 | Msa0798120:intron | 45.0% | |
| GCAATATCGATATGTGCACC+TGG | + | chr5_3:10725852-10725871 | Msa0798120:CDS | 45.0% | |
| ! | GGTGTTGTGCAACAGTTTGT+TGG | + | chr5_3:10726042-10726061 | Msa0798120:CDS | 45.0% |
| !! | TGCAACAGTTTGTTGGCCAT+GGG | + | chr5_3:10726049-10726068 | Msa0798120:CDS | 45.0% |
| TGCATAGACTAAGGGGTTGA+AGG | + | chr5_3:10726343-10726362 | Msa0798120:intron | 45.0% | |
| ATAGACTAAGGGGTTGAAGG+AGG | + | chr5_3:10726346-10726365 | Msa0798120:intron | 45.0% | |
| !!! | GACCTTTGGTTTTTCCCTTG+TGG | - | chr5_3:10726462-10726481 | None:intergenic | 45.0% |
| ! | TGGCAGTGTGGCCATATTTT+TGG | - | chr5_3:10727194-10727213 | None:intergenic | 45.0% |
| CATGGCAATGCCTATCCATA+TGG | - | chr5_3:10727263-10727282 | None:intergenic | 45.0% | |
| GAATTGCAACAGCTCAGATG+TGG | + | chr5_3:10727371-10727390 | Msa0798120:intron | 45.0% | |
| ATTGCAACAGCTCAGATGTG+GGG | + | chr5_3:10727373-10727392 | Msa0798120:intron | 45.0% | |
| ! | TGACACCAAGGGTATATTCC+TGG | - | chr5_3:10727863-10727882 | None:intergenic | 45.0% |
| CAAAACCTTATTCCAGCAGG+GGG | - | chr5_3:10728259-10728278 | None:intergenic | 45.0% | |
| ! | CCCCATCAGGTGTTATCAAA+AGG | - | chr5_3:10728647-10728666 | None:intergenic | 45.0% |
| !! | GGCACATGCTTGTTATACCA+TGG | - | chr5_3:10728793-10728812 | None:intergenic | 45.0% |
| !! | TTCAATATAATATAATATAA+GGG | - | chr5_3:10726591-10726610 | None:intergenic | 5.0% |
| !! | TTTCAATATAATATAATATA+AGG | - | chr5_3:10726592-10726611 | None:intergenic | 5.0% |
| CGACGTGGAGAAACAATTCC+AGG | - | chr5_3:10723360-10723379 | None:intergenic | 50.0% | |
| TCCACGTCGAAAAGTTCCCA+AGG | + | chr5_3:10723371-10723390 | Msa0798120:CDS | 50.0% | |
| ! | TCCTTGGGAACTTTTCGACG+TGG | - | chr5_3:10723375-10723394 | None:intergenic | 50.0% |
| GTAAAATCCATGGTTCCGCC+AGG | + | chr5_3:10723414-10723433 | Msa0798120:CDS | 50.0% | |
| GCTCAGGTTCTTCAGTATGC+TGG | + | chr5_3:10723507-10723526 | Msa0798120:CDS | 50.0% | |
| GTATGCTGGCACCTTAGTCA+AGG | + | chr5_3:10723521-10723540 | Msa0798120:CDS | 50.0% | |
| TACCCGTCTCCTCTTGGTTA+TGG | + | chr5_3:10724274-10724293 | Msa0798120:CDS | 50.0% | |
| CACCATAACCAAGAGGAGAC+GGG | - | chr5_3:10724279-10724298 | None:intergenic | 50.0% | |
| CCACCATAACCAAGAGGAGA+CGG | - | chr5_3:10724280-10724299 | None:intergenic | 50.0% | |
| ACCAGATTCACGTTCGCTTG+AGG | + | chr5_3:10724351-10724370 | Msa0798120:CDS | 50.0% | |
| ACCTCAAGCGAACGTGAATC+TGG | - | chr5_3:10724355-10724374 | None:intergenic | 50.0% | |
| TATATTGTTGGAGGGGACGG+AGG | + | chr5_3:10724658-10724677 | Msa0798120:intron | 50.0% | |
| !! | TTGCGGGGATGTTGATGATG+AGG | + | chr5_3:10724940-10724959 | Msa0798120:CDS | 50.0% |
| TGCCAACGATGGCTGTGATT+TGG | + | chr5_3:10724997-10725016 | Msa0798120:intron | 50.0% | |
| CACCAAATCACAGCCATCGT+TGG | - | chr5_3:10725002-10725021 | None:intergenic | 50.0% | |
| CCCCTTCTCTGTAATTCCTC+AGG | - | chr5_3:10725231-10725250 | None:intergenic | 50.0% | |
| TACGTTGGCACCAGTACTGT+AGG | - | chr5_3:10725428-10725447 | None:intergenic | 50.0% | |
| ATCGATATGTGCACCTGGAG+TGG | + | chr5_3:10725857-10725876 | Msa0798120:CDS | 50.0% | |
| !! | GTGCAACAGTTTGTTGGCCA+TGG | + | chr5_3:10726048-10726067 | Msa0798120:CDS | 50.0% |
| !! | GCAACAGTTTGTTGGCCATG+GGG | + | chr5_3:10726050-10726069 | Msa0798120:CDS | 50.0% |
| GAAAAACACGTCCAACCCCA+TGG | - | chr5_3:10726068-10726087 | None:intergenic | 50.0% | |
| AACAGCTCAGATGTGGGGAA+GGG | + | chr5_3:10727378-10727397 | Msa0798120:intron | 50.0% | |
| AGAGGGTAGTGAAAGTGGAG+TGG | + | chr5_3:10727487-10727506 | Msa0798120:intron | 50.0% | |
| GTAGTGAAAGTGGAGTGGAG+TGG | + | chr5_3:10727492-10727511 | Msa0798120:intron | 50.0% | |
| GAAAGTGGAGTGGAGTGGAA+TGG | + | chr5_3:10727497-10727516 | Msa0798120:intron | 50.0% | |
| AGCAGGGGGAATCAGCTATA+TGG | - | chr5_3:10728245-10728264 | None:intergenic | 50.0% | |
| ! | ATATAGCTGATTCCCCCTGC+TGG | + | chr5_3:10728244-10728263 | Msa0798120:intron | 50.0% |
| TGATTCCCCCTGCTGGAATA+AGG | + | chr5_3:10728251-10728270 | Msa0798120:intron | 50.0% | |
| ATGCTGCCCATAGTCAGCAT+AGG | - | chr5_3:10728549-10728568 | None:intergenic | 50.0% | |
| GCAGCATCAATCCAGTGATG+TGG | + | chr5_3:10728562-10728581 | Msa0798120:CDS | 50.0% | |
| GTCATAATCTCAGCCCCATC+AGG | - | chr5_3:10728660-10728679 | None:intergenic | 50.0% | |
| CTCTTGCTGGAAATCACCCA+TGG | + | chr5_3:10728773-10728792 | Msa0798120:three_prime_UTR | 50.0% | |
| ATAGCGTATTGCTCCCCCTT+TGG | + | chr5_3:10729017-10729036 | Msa0798120:three_prime_UTR | 50.0% | |
| GCAGCGTAGGAATCGATCTC+CGG | - | chr5_3:10723108-10723127 | None:intergenic | 55.0% | |
| TCATGTCCACTCGCAATCCC+TGG | - | chr5_3:10723435-10723454 | None:intergenic | 55.0% | |
| !! | TTCTGGAAGGCTTGCTGCTC+AGG | + | chr5_3:10723491-10723510 | Msa0798120:CDS | 55.0% |
| CCGTCTCCTCTTGGTTATGG+TGG | + | chr5_3:10724277-10724296 | Msa0798120:CDS | 55.0% | |
| !! | CAGTTTGTTGGCCATGGGGT+TGG | + | chr5_3:10726054-10726073 | Msa0798120:CDS | 55.0% |
| ACTAAGGGGTTGAAGGAGGC+AGG | + | chr5_3:10726350-10726369 | Msa0798120:intron | 55.0% | |
| CTAAGGGGTTGAAGGAGGCA+GGG | + | chr5_3:10726351-10726370 | Msa0798120:intron | 55.0% | |
| TAAGGGGTTGAAGGAGGCAG+GGG | + | chr5_3:10726352-10726371 | Msa0798120:intron | 55.0% | |
| CAACAGCTCAGATGTGGGGA+AGG | + | chr5_3:10727377-10727396 | Msa0798120:intron | 55.0% | |
| ACAGCTCAGATGTGGGGAAG+GGG | + | chr5_3:10727379-10727398 | Msa0798120:intron | 55.0% | |
| TGACTCCCTGATCTAGCGCT+TGG | + | chr5_3:10727534-10727553 | Msa0798120:intron | 55.0% | |
| !! | ATTGGTGGCGTGAGCAGCGT+AGG | - | chr5_3:10723121-10723140 | None:intergenic | 60.0% |
| TGTCCACTCGCAATCCCTGG+CGG | - | chr5_3:10723432-10723451 | None:intergenic | 60.0% | |
| !! | TGCTTTTTGTCCGGGTGGGG+AGG | + | chr5_3:10724536-10724555 | Msa0798120:intron | 60.0% |
| ! | GCTTTTTGTCCGGGTGGGGA+GGG | + | chr5_3:10724537-10724556 | Msa0798120:intron | 60.0% |
| ! | CTTTTTGTCCGGGTGGGGAG+GGG | + | chr5_3:10724538-10724557 | Msa0798120:intron | 60.0% |
| ! | TTTTTGTCCGGGTGGGGAGG+GGG | + | chr5_3:10724539-10724558 | Msa0798120:intron | 60.0% |
| GGTTGAAGGAGGCAGGGGTT+TGG | + | chr5_3:10726357-10726376 | Msa0798120:intron | 60.0% | |
| ! | AGATGTGGGGAAGGGGTGCA+TGG | + | chr5_3:10727386-10727405 | Msa0798120:intron | 60.0% |
| ! | GATGTGGGGAAGGGGTGCAT+GGG | + | chr5_3:10727387-10727406 | Msa0798120:intron | 60.0% |
| CAGTGATGCGCTGCTGCTCG+CGG | - | chr5_3:10723069-10723088 | None:intergenic | 65.0% | |
| CGCAATCCCTGGCGGAACCA+TGG | - | chr5_3:10723424-10723443 | None:intergenic | 65.0% | |
| GTTCCGCCAGGGATTGCGAG+TGG | + | chr5_3:10723426-10723445 | Msa0798120:CDS | 65.0% | |
| GGTGCGTACCCGTCTCCTCT+TGG | + | chr5_3:10724268-10724287 | Msa0798120:CDS | 65.0% | |
| !! | GTGGGGAGGGGGACTAGTCA+TGG | + | chr5_3:10724550-10724569 | Msa0798120:intron | 65.0% |
| TGTTGGAGGGGACGGAGGCT+AGG | + | chr5_3:10724663-10724682 | Msa0798120:intron | 65.0% | |
| ! | GACTAGTCCCCCTCCCCACC+CGG | - | chr5_3:10724549-10724568 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 10722930 | 10729116 | 10722930 | ID=Msa0798120;Name=Msa0798120 |
| chr5_3 | mRNA | 10722930 | 10729116 | 10722930 | ID=Msa0798120-mRNA-1;Parent=Msa0798120;Name=Msa0798120-mRNA-1;_AED=0.01;_eAED=0.01;_QI=126|1|1|1|1|1|9|427|351 |
| chr5_3 | exon | 10722930 | 10723170 | 10722930 | ID=Msa0798120-mRNA-1:exon:4429;Parent=Msa0798120-mRNA-1 |
| chr5_3 | exon | 10723250 | 10723542 | 10723250 | ID=Msa0798120-mRNA-1:exon:4430;Parent=Msa0798120-mRNA-1 |
| chr5_3 | exon | 10724211 | 10724372 | 10724211 | ID=Msa0798120-mRNA-1:exon:4431;Parent=Msa0798120-mRNA-1 |
| chr5_3 | exon | 10724450 | 10724491 | 10724450 | ID=Msa0798120-mRNA-1:exon:4432;Parent=Msa0798120-mRNA-1 |
| chr5_3 | exon | 10724908 | 10724979 | 10724908 | ID=Msa0798120-mRNA-1:exon:4433;Parent=Msa0798120-mRNA-1 |
| chr5_3 | exon | 10725828 | 10725907 | 10725828 | ID=Msa0798120-mRNA-1:exon:4434;Parent=Msa0798120-mRNA-1 |
| chr5_3 | exon | 10726017 | 10726114 | 10726017 | ID=Msa0798120-mRNA-1:exon:4435;Parent=Msa0798120-mRNA-1 |
| chr5_3 | exon | 10726746 | 10726793 | 10726746 | ID=Msa0798120-mRNA-1:exon:4436;Parent=Msa0798120-mRNA-1 |
| chr5_3 | exon | 10728544 | 10729116 | 10728544 | ID=Msa0798120-mRNA-1:exon:4437;Parent=Msa0798120-mRNA-1 |
| chr5_3 | five_prime_UTR | 10722930 | 10723055 | 10722930 | ID=Msa0798120-mRNA-1:five_prime_utr;Parent=Msa0798120-mRNA-1 |
| chr5_3 | CDS | 10723056 | 10723170 | 10723056 | ID=Msa0798120-mRNA-1:cds;Parent=Msa0798120-mRNA-1 |
| chr5_3 | CDS | 10723250 | 10723542 | 10723250 | ID=Msa0798120-mRNA-1:cds;Parent=Msa0798120-mRNA-1 |
| chr5_3 | CDS | 10724211 | 10724372 | 10724211 | ID=Msa0798120-mRNA-1:cds;Parent=Msa0798120-mRNA-1 |
| chr5_3 | CDS | 10724450 | 10724491 | 10724450 | ID=Msa0798120-mRNA-1:cds;Parent=Msa0798120-mRNA-1 |
| chr5_3 | CDS | 10724908 | 10724979 | 10724908 | ID=Msa0798120-mRNA-1:cds;Parent=Msa0798120-mRNA-1 |
| chr5_3 | CDS | 10725828 | 10725907 | 10725828 | ID=Msa0798120-mRNA-1:cds;Parent=Msa0798120-mRNA-1 |
| chr5_3 | CDS | 10726017 | 10726114 | 10726017 | ID=Msa0798120-mRNA-1:cds;Parent=Msa0798120-mRNA-1 |
| chr5_3 | CDS | 10726746 | 10726793 | 10726746 | ID=Msa0798120-mRNA-1:cds;Parent=Msa0798120-mRNA-1 |
| chr5_3 | CDS | 10728544 | 10728689 | 10728544 | ID=Msa0798120-mRNA-1:cds;Parent=Msa0798120-mRNA-1 |
| chr5_3 | three_prime_UTR | 10728690 | 10729116 | 10728690 | ID=Msa0798120-mRNA-1:three_prime_utr;Parent=Msa0798120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
