AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0455610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0455610 MtrunA17_Chr3g0102541 95.758 165 7 0 2 166 193 357 2.90e-113 337
Msa0455610 MtrunA17_Chr3g0102531 93.902 164 10 0 2 165 192 355 7.27e-110 328
Msa0455610 MtrunA17_Chr3g0102551 72.455 167 44 1 2 166 201 367 1.90e-86 268
Msa0455610 MtrunA17_Chr3g0088821 41.818 165 92 4 2 165 451 612 2.09e-38 139
Msa0455610 MtrunA17_Chr8g0352231 41.212 165 93 4 2 165 451 612 2.61e-38 138
Msa0455610 MtrunA17_Chr8g0364641 41.212 165 92 4 2 165 385 545 3.62e-38 138
Msa0455610 MtrunA17_Chr1g0201731 41.212 165 93 4 2 165 471 632 1.54e-37 136
Msa0455610 MtrunA17_Chr8g0379241 41.818 165 92 4 2 165 376 537 1.90e-37 135
Msa0455610 MtrunA17_Chr8g0383701 41.212 165 93 4 2 165 469 630 1.98e-37 135
Msa0455610 MtrunA17_Chr3g0137951 40.606 165 94 4 2 165 461 622 8.94e-37 134
Msa0455610 MtrunA17_Chr7g0267731 41.212 165 93 3 2 165 363 524 2.24e-35 130
Msa0455610 MtrunA17_Chr2g0284211 40.606 165 94 3 2 165 361 522 3.99e-35 129
Msa0455610 MtrunA17_Chr2g0322341 39.130 161 84 4 2 160 197 345 4.49e-35 125
Msa0455610 MtrunA17_Chr4g0073711 37.576 165 99 4 2 165 431 592 2.29e-34 127
Msa0455610 MtrunA17_Chr2g0296991 38.182 165 98 4 2 165 402 563 4.88e-34 126
Msa0455610 MtrunA17_Chr3g0078671 42.308 156 86 3 2 156 418 570 1.95e-33 124
Msa0455610 MtrunA17_Chr2g0322361 34.969 163 97 3 2 164 197 350 3.45e-32 120
Msa0455610 MtrunA17_Chr4g0025201 36.810 163 93 4 2 164 192 344 1.26e-31 119
Msa0455610 MtrunA17_Chr2g0322371 35.583 163 93 4 2 164 190 340 3.99e-31 117
Msa0455610 MtrunA17_Chr1g0183381 38.788 165 97 4 2 165 303 464 4.42e-31 117
Msa0455610 MtrunA17_Chr2g0307191 50.000 100 50 0 67 166 230 329 1.41e-30 116
Msa0455610 MtrunA17_Chr5g0410641 42.754 138 65 3 41 165 528 664 4.36e-30 115
Msa0455610 MtrunA17_Chr3g0077511 55.814 86 38 0 70 155 233 318 6.19e-30 114
Msa0455610 MtrunA17_Chr2g0322351 36.420 162 92 3 2 163 194 344 1.16e-29 113
Msa0455610 MtrunA17_Chr4g0046401 41.481 135 75 2 25 159 216 346 1.64e-29 113
Msa0455610 MtrunA17_Chr1g0165411 41.912 136 63 4 36 156 512 646 2.58e-29 112
Msa0455610 MtrunA17_Chr2g0298581 53.933 89 41 0 67 155 230 318 2.67e-29 112
Msa0455610 MtrunA17_Chr3g0095791 51.685 89 43 0 67 155 229 317 5.48e-29 111
Msa0455610 MtrunA17_Chr1g0165421 38.372 172 87 6 2 156 491 660 1.93e-28 110
Msa0455610 MtrunA17_Chr4g0039801 42.754 138 65 3 41 165 549 685 2.13e-28 110
Msa0455610 MtrunA17_Chr7g0269741 39.157 166 77 6 21 165 546 708 3.11e-28 109
Msa0455610 MtrunA17_Chr1g0186381 44.737 114 59 2 43 155 232 342 6.64e-28 108
Msa0455610 MtrunA17_Chr2g0297351 40.625 128 63 3 41 156 437 563 9.34e-26 102
Msa0455610 MtrunA17_Chr7g0274751 46.465 99 52 1 67 165 376 473 2.16e-24 98.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0455610 AT1G55850.1 55.422 166 69 2 2 166 204 365 9.58e-64 208
Msa0455610 AT4G23990.1 41.071 168 94 2 2 165 213 379 1.16e-38 139
Msa0455610 AT5G05170.1 41.818 165 92 4 2 165 439 600 2.00e-38 139
Msa0455610 AT4G23990.2 41.212 165 92 2 5 165 2 165 3.58e-38 137
Msa0455610 AT4G24010.1 43.396 159 85 2 2 156 194 351 4.76e-38 137
Msa0455610 AT4G39350.1 41.818 165 92 4 2 165 457 618 9.31e-38 137
Msa0455610 AT4G24000.1 41.667 168 86 3 2 165 191 350 1.57e-37 136
Msa0455610 AT5G64740.1 41.818 165 92 4 2 165 456 617 4.97e-37 135
Msa0455610 AT4G18780.1 41.818 165 92 3 2 165 364 525 5.31e-37 135
Msa0455610 AT4G32410.1 40.606 165 94 4 2 165 455 616 7.17e-37 134
Msa0455610 AT5G09870.1 41.818 165 92 4 2 165 444 605 9.67e-37 134
Msa0455610 AT4G24000.2 41.212 165 85 3 5 165 2 158 1.20e-36 132
Msa0455610 AT2G21770.1 41.818 165 92 4 2 165 462 623 1.22e-36 134
Msa0455610 AT5G44030.3 40.000 165 95 4 2 165 116 277 7.27e-36 131
Msa0455610 AT5G44030.1 40.000 165 95 4 2 165 395 556 7.43e-36 132
Msa0455610 AT5G44030.2 40.000 165 95 4 2 165 424 585 9.13e-36 131
Msa0455610 AT2G25540.1 40.606 165 94 3 2 165 435 596 9.47e-36 131
Msa0455610 AT5G17420.1 38.182 165 98 4 2 165 418 579 5.76e-35 129
Msa0455610 AT1G32180.1 42.254 142 68 3 37 165 385 525 9.35e-31 117
Msa0455610 AT1G32180.2 42.254 142 68 3 37 165 385 525 9.35e-31 117
Msa0455610 AT3G03050.1 37.363 182 93 5 2 165 510 688 9.69e-31 117
Msa0455610 AT5G16910.1 36.111 180 98 5 2 165 513 691 6.07e-29 112
Msa0455610 AT1G02730.1 40.361 166 73 7 22 165 555 716 8.97e-29 111
Msa0455610 AT4G38190.1 36.810 163 81 6 21 164 506 665 1.95e-28 110
Msa0455610 AT2G32620.2 39.474 152 74 5 1 146 192 331 5.35e-27 106
Msa0455610 AT2G32620.3 39.474 152 74 5 1 146 192 331 6.66e-27 106
Msa0455610 AT2G32620.4 39.474 152 74 5 1 146 96 235 6.72e-27 106
Msa0455610 AT4G15320.5 37.419 155 89 4 1 154 192 339 7.15e-27 106
Msa0455610 AT2G32620.1 39.474 152 74 5 1 146 192 331 7.43e-27 105
Msa0455610 AT4G15320.3 37.419 155 89 4 1 154 192 339 7.44e-27 105
Msa0455610 AT2G33100.2 43.750 128 59 3 41 156 444 570 8.39e-27 105
Msa0455610 AT2G33100.1 43.750 128 59 3 41 156 444 570 8.39e-27 105
Msa0455610 AT4G15290.1 37.419 155 89 4 1 154 192 339 1.55e-26 105
Msa0455610 AT4G15320.4 43.750 112 60 2 44 154 245 354 1.98e-26 104
Msa0455610 AT2G32540.1 38.095 147 83 4 1 146 192 331 6.17e-26 103
Msa0455610 AT2G32530.1 37.415 147 84 4 1 146 192 331 9.17e-26 102
Msa0455610 AT2G32610.1 36.000 150 78 4 3 146 195 332 5.43e-23 95.1
Msa0455610 AT4G15320.2 28.358 201 90 4 1 154 192 385 2.51e-19 84.3
Msa0455610 AT4G15320.1 31.111 135 46 2 67 154 294 428 1.33e-15 73.9

Find 173 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCCCACCTTGGTATATT+TGG 0.175535 3_3:+48617408 Msa0455610:CDS
ATGCTTGTACGCGCCTTTGC+TGG 0.184350 3_3:+48618958 Msa0455610:three_prime_UTR
TTCCACGGAACATGAAATTT+TGG 0.190293 3_3:+48619815 Msa0455610:three_prime_UTR
GTGTGTTCTGGTTAAATTTA+TGG 0.207714 3_3:+48618375 Msa0455610:three_prime_UTR
CTTTGAAGTTATGATGAAAT+TGG 0.227274 3_3:-48617447 None:intergenic
TGCTTTGAGTATGTTTCTTC+TGG 0.240123 3_3:-48617110 None:intergenic
TGCCTTTGTGCAGGCTCCTC+AGG 0.251166 3_3:+48617795 Msa0455610:CDS
CAAACAATTCTCAATCAATA+AGG 0.252812 3_3:+48617728 Msa0455610:CDS
GTTAGCAAAACTCGTAAAAT+AGG 0.276527 3_3:+48619153 Msa0455610:three_prime_UTR
TCTATTAATAATACATAGTT+TGG 0.276680 3_3:-48617919 None:intergenic
ATGAGTCATGTCGAGGAAAT+AGG 0.281513 3_3:+48619438 Msa0455610:three_prime_UTR
ACATTTGCAAAGAGCAATTA+AGG 0.296261 3_3:-48618904 None:intergenic
TAATTGTTTCATGTTGAGTA+TGG 0.300032 3_3:+48619649 Msa0455610:three_prime_UTR
GTGCGTTCACCTATTGTATT+TGG 0.308398 3_3:+48618648 Msa0455610:three_prime_UTR
ATGTCTACATAAAGTTTATC+TGG 0.315883 3_3:-48618044 None:intergenic
GGATGCACTTTGCTTCTTCA+TGG 0.325256 3_3:+48617750 Msa0455610:CDS
TTTGAAGTTATGATGAAATT+GGG 0.331599 3_3:-48617446 None:intergenic
GTGGTTTCGACCGTGTGTTC+TGG 0.357728 3_3:+48618363 Msa0455610:three_prime_UTR
TTGCTGGGTTGCGTCTATGA+TGG 0.361346 3_3:+48618974 Msa0455610:three_prime_UTR
TGCTTGTACGCGCCTTTGCT+GGG 0.370328 3_3:+48618959 Msa0455610:three_prime_UTR
TCGTGTTGTGTTTGTATTTG+TGG 0.372476 3_3:+48618543 Msa0455610:three_prime_UTR
TTGTGAAAATCATATATATA+TGG 0.375708 3_3:+48619738 Msa0455610:three_prime_UTR
CGTGTTGTGTTTGTATTTGT+GGG 0.393284 3_3:+48618544 Msa0455610:three_prime_UTR
ACTTAAACTTTATGTAGATA+TGG 0.395656 3_3:+48618082 Msa0455610:three_prime_UTR
CTACTCGACTTTCCATATCT+TGG 0.397111 3_3:-48617061 None:intergenic
TTCTGGTACTTTACCCAACT+TGG 0.398887 3_3:-48617093 None:intergenic
TACATAAAGTTTATCTGGAC+TGG 0.400649 3_3:-48618039 None:intergenic
TATATATGAAAGAGACTGAT+TGG 0.402999 3_3:+48619602 Msa0455610:three_prime_UTR
GTCGAAACCACATGCTTCAT+TGG 0.404204 3_3:-48618351 None:intergenic
GGGAGAGGAAGGTGTTGGCT+TGG 0.411420 3_3:-48618012 None:intergenic
TAGAATGTTTAACCTCTATA+CGG 0.411977 3_3:-48619535 None:intergenic
ATTGAGATCTGCATGTTTCA+AGG 0.414560 3_3:+48618708 Msa0455610:three_prime_UTR
TATACCTGGGTCAGGTCTAA+TGG 0.416273 3_3:+48619068 Msa0455610:three_prime_UTR
GCATATTATATGCAGGGGTC+GGG 0.418043 3_3:+48618143 Msa0455610:three_prime_UTR
ATAGATACTGCTTCATAGAA+AGG 0.419013 3_3:+48617357 Msa0455610:intron
TGAGTCATGTCGAGGAAATA+GGG 0.419228 3_3:+48619439 Msa0455610:three_prime_UTR
TTCTATTCTTGATCCGAGAT+TGG 0.422363 3_3:+48618597 Msa0455610:three_prime_UTR
ATAGCGAATGTACCAAGATA+TGG 0.425715 3_3:+48617049 Msa0455610:intron
CATGCAGATCTCAATGGATC+TGG 0.428500 3_3:-48618700 None:intergenic
TTCTTTGCTTGTAGCTTATG+AGG 0.437237 3_3:+48617855 Msa0455610:CDS
GCAATATCACCAAATACAAT+AGG 0.438202 3_3:-48618657 None:intergenic
TGTGGAGAAGTGAGGTGTCC+AGG 0.438323 3_3:-48618174 None:intergenic
CATAATAGCCACCTTGGTAA+AGG 0.438680 3_3:-48619491 None:intergenic
ATAATAGCCACCTTGGTAAA+GGG 0.439804 3_3:-48619490 None:intergenic
TTTCATCATAACTTCAAAGC+TGG 0.443682 3_3:+48617451 Msa0455610:CDS
AAACAATTCTCAATCAATAA+GGG 0.446557 3_3:+48617729 Msa0455610:CDS
TGCTGGGTTGCGTCTATGAT+GGG 0.452202 3_3:+48618975 Msa0455610:three_prime_UTR
AGAGGAAGGTGTTGGCTTGG+AGG 0.454272 3_3:-48618009 None:intergenic
ATTCTTGATCCGAGATTGGC+TGG 0.456180 3_3:+48618601 Msa0455610:three_prime_UTR
GACTGATTGGGCAGAGATGA+AGG 0.457999 3_3:+48619615 Msa0455610:three_prime_UTR
AAAGAGGGTGGTGCAGTTGT+TGG 0.459949 3_3:-48618269 None:intergenic
CATATCCTTTACTCGGTTGA+GGG 0.463411 3_3:-48619201 None:intergenic
GAGCAATTAAGGTATAAAAC+AGG 0.465227 3_3:-48618893 None:intergenic
AACAAACCCATCTTCATCTC+TGG 0.467241 3_3:-48617386 None:intergenic
CTTCTTCATGGATGAAGAGA+AGG 0.469449 3_3:+48617762 Msa0455610:CDS
ACATATCCTTTACTCGGTTG+AGG 0.470358 3_3:-48619202 None:intergenic
ATTCTCGTTTGAGTTATACC+TGG 0.471999 3_3:+48619054 Msa0455610:three_prime_UTR
GCCTTTGTGCAGGCTCCTCA+GGG 0.474739 3_3:+48617796 Msa0455610:CDS
TGCATATTATATGCAGGGGT+CGG 0.475601 3_3:+48618142 Msa0455610:three_prime_UTR
GGTGTTGTGTTAGAAGAAAC+TGG 0.475843 3_3:+48619884 Msa0455610:three_prime_UTR
GAACAATGCATATTATATGC+AGG 0.476359 3_3:+48618136 Msa0455610:three_prime_UTR
TGGTTCTCTGTGTTAATTTG+TGG 0.476578 3_3:+48618762 Msa0455610:three_prime_UTR
AGAAGGCCAAAGTGCAGAGA+TGG 0.480972 3_3:+48619691 Msa0455610:three_prime_UTR
AAGTTTATCTGGACTGGGAG+GGG 0.484863 3_3:-48618033 None:intergenic
GGAGGATAGACGATCTATAG+TGG 0.487314 3_3:+48619390 Msa0455610:three_prime_UTR
GTAGAAAATGCATCCAAGTT+GGG 0.487538 3_3:+48617080 Msa0455610:CDS
AGAAACATACTCAAAGCATA+AGG 0.489166 3_3:+48617115 Msa0455610:CDS
TAGGTCAGCGCATGTTTCTC+CGG 0.492972 3_3:+48618325 Msa0455610:three_prime_UTR
AGGGGTCGGGGTTCGAACCC+TGG 0.495492 3_3:+48618156 Msa0455610:three_prime_UTR
GTGCAGAGATGGAGCTGAGT+TGG 0.499573 3_3:+48619702 Msa0455610:three_prime_UTR
TTGCATATCAGAAGCTTGCT+AGG 0.499648 3_3:+48618306 Msa0455610:three_prime_UTR
TAGATTAGGGTTGGTACACT+TGG 0.501454 3_3:+48619013 Msa0455610:three_prime_UTR
AACAATGCATATTATATGCA+GGG 0.501565 3_3:+48618137 Msa0455610:three_prime_UTR
ATCGAAAATTATCCGTATAG+AGG 0.503359 3_3:+48619523 Msa0455610:three_prime_UTR
GGCGATTAAGTAATCATATG+AGG 0.504085 3_3:+48619174 Msa0455610:three_prime_UTR
ACATGAAATTGCCTTTGTGC+AGG 0.505115 3_3:+48617786 Msa0455610:CDS
GTTTGAGTTATACCTGGGTC+AGG 0.507277 3_3:+48619060 Msa0455610:three_prime_UTR
ATAGTGGAGTTGTACACAAA+AGG 0.512796 3_3:+48619406 Msa0455610:three_prime_UTR
TTGTTATGATAGATTAGGGT+TGG 0.513396 3_3:+48619004 Msa0455610:three_prime_UTR
GCAAGCTTCTGATATGCAAA+TGG 0.514418 3_3:-48618302 None:intergenic
ACACTTAGTTAAAATCATAG+TGG 0.514737 3_3:+48619301 Msa0455610:three_prime_UTR
TGGAGGAAGTTTGTAGTGAG+AGG 0.516120 3_3:-48617992 None:intergenic
TTGAAACATGCAGATCTCAA+TGG 0.516984 3_3:-48618706 None:intergenic
ATGTGTGAGCTTTAGCCACT+AGG 0.519771 3_3:+48618207 Msa0455610:three_prime_UTR
AGTTTATCTGGACTGGGAGG+GGG 0.521051 3_3:-48618032 None:intergenic
CATATAATATACACAGAAGA+AGG 0.521423 3_3:+48619674 Msa0455610:three_prime_UTR
TCCCGTGAACTTATCTCAGT+TGG 0.523005 3_3:+48618110 Msa0455610:three_prime_UTR
AATGATTGTTCAAAGAAATG+AGG 0.523104 3_3:+48619368 Msa0455610:three_prime_UTR
CTCAAAACGTGGGTCGTCAA+AGG 0.525011 3_3:+48619274 Msa0455610:three_prime_UTR
TTCTCGTTTGAGTTATACCT+GGG 0.528084 3_3:+48619055 Msa0455610:three_prime_UTR
TCAGCTCCATCTCTGCACTT+TGG 0.528845 3_3:-48619697 None:intergenic
ATCCAAAATTTCATGTTCCG+TGG 0.528983 3_3:-48619817 None:intergenic
AGTAGAAAATGCATCCAAGT+TGG 0.534174 3_3:+48617079 Msa0455610:CDS
CTGCATGTTTCAAGGCATCA+AGG 0.538456 3_3:+48618716 Msa0455610:three_prime_UTR
TTTGTGGGCTTGCGACAGTT+TGG 0.539812 3_3:+48618559 Msa0455610:three_prime_UTR
CATATTATATGCAGGGGTCG+GGG 0.540278 3_3:+48618144 Msa0455610:three_prime_UTR
ATTGAACTTTGTTAGTGTGT+TGG 0.540622 3_3:+48618855 Msa0455610:three_prime_UTR
TGTCATCAATGATTAGCAAT+GGG 0.542769 3_3:+48617671 Msa0455610:CDS
ACATAAAGTTTATCTGGACT+GGG 0.543733 3_3:-48618038 None:intergenic
ATATATGAAAGAGACTGATT+GGG 0.544354 3_3:+48619603 Msa0455610:three_prime_UTR
AAAGTTTATCTGGACTGGGA+GGG 0.548823 3_3:-48618034 None:intergenic
CACTTAGTTAAAATCATAGT+GGG 0.550522 3_3:+48619302 Msa0455610:three_prime_UTR
GACAATGCCAGAGATGAAGA+TGG 0.557521 3_3:+48617379 Msa0455610:CDS
TATCTTCAACCAGCCAATCT+CGG 0.559947 3_3:-48618610 None:intergenic
AGCTCATCAAAGTTTACAAG+AGG 0.562653 3_3:+48619863 Msa0455610:three_prime_UTR
TTGAAGTTATGATGAAATTG+GGG 0.563444 3_3:-48617445 None:intergenic
TTGGGCAGAGATGAAGGAAA+TGG 0.564181 3_3:+48619621 Msa0455610:three_prime_UTR
GTATGCCTCAACTCTAGTAC+CGG 0.564960 3_3:+48618738 Msa0455610:three_prime_UTR
GAGGCCCCTCAACCGAGTAA+AGG 0.567491 3_3:+48619196 Msa0455610:three_prime_UTR
GTGTCATCAATGATTAGCAA+TGG 0.569343 3_3:+48617670 Msa0455610:CDS
AGGTGGCTATTATGCAAACC+TGG 0.569699 3_3:+48619500 Msa0455610:three_prime_UTR
GTGGAGAAGTGAGGTGTCCA+GGG 0.571466 3_3:-48618173 None:intergenic
AGCTGGAGCTATGAATTCAC+TGG 0.575270 3_3:+48617468 Msa0455610:CDS
TAGGGCTGAAGTTGAACGTA+AGG 0.576260 3_3:+48619457 Msa0455610:three_prime_UTR
TTAAATTTATGGTGTCATAG+TGG 0.578839 3_3:+48618386 Msa0455610:three_prime_UTR
GCTATGATCTCTACTCTCAA+AGG 0.580983 3_3:+48619344 Msa0455610:three_prime_UTR
ACCAACTGAGATAAGTTCAC+GGG 0.581138 3_3:-48618111 None:intergenic
GAAATAACATCTCCCTCGCT+CGG 0.587590 3_3:-48619238 None:intergenic
TGGGTTTGTTATGCCCACCT+TGG 0.587789 3_3:+48617399 Msa0455610:CDS
AGGGAGATGTTATTTCTCAA+AGG 0.589064 3_3:+48619245 Msa0455610:three_prime_UTR
AATACTAATTCGAAGTGGAA+AGG 0.590484 3_3:+48619792 Msa0455610:three_prime_UTR
GGTTTGCATAATAGCCACCT+TGG 0.590737 3_3:-48619497 None:intergenic
AGAATCACATATCCTTTACT+CGG 0.591168 3_3:-48619208 None:intergenic
TAATAGCCACCTTGGTAAAG+GGG 0.591938 3_3:-48619489 None:intergenic
TACCAACTGAGATAAGTTCA+CGG 0.595227 3_3:-48618112 None:intergenic
CTGTAAATACTAATTCGAAG+TGG 0.596016 3_3:+48619787 Msa0455610:three_prime_UTR
ATGATTGTTCAAAGAAATGA+GGG 0.598360 3_3:+48619369 Msa0455610:three_prime_UTR
CCGGTCTCCAATGAAGCATG+TGG 0.599316 3_3:+48618344 Msa0455610:three_prime_UTR
CGAGCCAAATATACCAAGGT+GGG 0.599351 3_3:-48617412 None:intergenic
CCACATGCTTCATTGGAGAC+CGG 0.599535 3_3:-48618344 None:intergenic
TAAGGTATAAAACAGGCGAA+TGG 0.601473 3_3:-48618886 None:intergenic
TTCTTCATGGATGAAGAGAA+GGG 0.601789 3_3:+48617763 Msa0455610:CDS
TTCGAAGTGGAAAGGTTCCA+CGG 0.602555 3_3:+48619800 Msa0455610:three_prime_UTR
ACAATGCCAGAGATGAAGAT+GGG 0.604837 3_3:+48617380 Msa0455610:CDS
AAATGGCACTGATGTGAAAG+AGG 0.606146 3_3:-48618285 None:intergenic
ATCACGAGCAAAACAACCAG+AGG 0.613253 3_3:-48618442 None:intergenic
TCATAGACGCAACCCAGCAA+AGG 0.617320 3_3:-48618971 None:intergenic
ACCATCCGGTACTAGAGTTG+AGG 0.619907 3_3:-48618743 None:intergenic
AATTAACACAGAGAACCATC+CGG 0.620376 3_3:-48618757 None:intergenic
CTCGACATGACTCATTGACA+AGG 0.621244 3_3:-48619430 None:intergenic
ATATCCTTTACTCGGTTGAG+GGG 0.621956 3_3:-48619200 None:intergenic
GGGTGGTGCAGTTGTTGGAA+CGG 0.622485 3_3:-48618264 None:intergenic
TAGTGGAAGCCTATCAGTTG+AGG 0.623231 3_3:+48618403 Msa0455610:three_prime_UTR
ATTCTAGAGTAACCGAGCGA+GGG 0.624271 3_3:+48619226 Msa0455610:three_prime_UTR
TAAAGTTTATCTGGACTGGG+AGG 0.627962 3_3:-48618035 None:intergenic
GCCTCAACTCTAGTACCGGA+TGG 0.629601 3_3:+48618742 Msa0455610:three_prime_UTR
CACCTTGGTAAAGGGGATCG+TGG 0.629786 3_3:-48619482 None:intergenic
GATTCTAGAGTAACCGAGCG+AGG 0.632029 3_3:+48619225 Msa0455610:three_prime_UTR
ATTGGCTGGTTGAAGATATG+TGG 0.640744 3_3:+48618615 Msa0455610:three_prime_UTR
GTACTTGAAGAATTGTGTCA+TGG 0.641937 3_3:-48617175 None:intergenic
AGATAAACTTTATGTAGACA+TGG 0.642292 3_3:+48618046 Msa0455610:three_prime_UTR
GTGAACTTATCTCAGTTGGT+AGG 0.645657 3_3:+48618114 Msa0455610:three_prime_UTR
CTTGTCAATGAGTCATGTCG+AGG 0.651628 3_3:+48619431 Msa0455610:three_prime_UTR
CACGATCCCCTTTACCAAGG+TGG 0.657374 3_3:+48619483 Msa0455610:three_prime_UTR
CGCCACGATCCCCTTTACCA+AGG 0.657474 3_3:+48619480 Msa0455610:three_prime_UTR
CTCACGAGCCAAATATACCA+AGG 0.657691 3_3:-48617416 None:intergenic
CTTCGAATTAGTATTTACAG+TGG 0.658147 3_3:-48619784 None:intergenic
ATTGTTCAAAGAAATGAGGG+AGG 0.658343 3_3:+48619372 Msa0455610:three_prime_UTR
ACAATGCATATTATATGCAG+GGG 0.680390 3_3:+48618138 Msa0455610:three_prime_UTR
AAAGGAACTAACTCAAAACG+TGG 0.684210 3_3:+48619263 Msa0455610:three_prime_UTR
TCACGAGCAAAACAACCAGA+GGG 0.685639 3_3:-48618441 None:intergenic
GGCACTGATGTGAAAGAGGG+TGG 0.686211 3_3:-48618281 None:intergenic
ACGAGCCAAATATACCAAGG+TGG 0.686997 3_3:-48617413 None:intergenic
GCCCTGAGGAGCCTGCACAA+AGG 0.693119 3_3:-48617797 None:intergenic
TCGATGGTGGTGTATGTGTG+TGG 0.694986 3_3:+48618505 Msa0455610:three_prime_UTR
AATGGCACTGATGTGAAAGA+GGG 0.700270 3_3:-48618284 None:intergenic
GATTAAGTAATCATATGAGG+AGG 0.700595 3_3:+48619177 Msa0455610:three_prime_UTR
GGAACATCTGAGAATCGAAG+AGG 0.704163 3_3:-48618679 None:intergenic
ACAAACACAACACGACAGTG+AGG 0.706832 3_3:-48618535 None:intergenic
AAGGAACTAACTCAAAACGT+GGG 0.719594 3_3:+48619264 Msa0455610:three_prime_UTR
GAGGCCATTAGACCTGACCC+AGG 0.742062 3_3:-48619072 None:intergenic
ATAAATTTAACCAGAACACA+CGG 0.753105 3_3:-48618373 None:intergenic
GTTGTGTTAGAAGAAACTGG+TGG 0.811382 3_3:+48619887 Msa0455610:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGAATTTTTATATGTTTTA+AGG - chr3_3:48615789-48615808 None:intergenic 10.0%
!!! TTTATTGTTTGTTTTTAATT+AGG - chr3_3:48616765-48616784 None:intergenic 10.0%
!!! TATTAATATTTTTTGTAACA+TGG + chr3_3:48618931-48618950 Msa0455610:three_prime_UTR 10.0%
!!! TATATGGTTAAATATGTTTT+TGG + chr3_3:48615124-48615143 Msa0455610:intron 15.0%
!! GAAAAACTGATATATTTATA+GGG - chr3_3:48615151-48615170 None:intergenic 15.0%
!!! TTTTTGAGATCTTTAATTTA+AGG - chr3_3:48615397-48615416 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - chr3_3:48615629-48615648 None:intergenic 15.0%
!!! TAGAATTTTTTAACAAAACA+TGG - chr3_3:48615744-48615763 None:intergenic 15.0%
!!! CCTTTAAATCTATTTTTTAT+AGG - chr3_3:48616300-48616319 None:intergenic 15.0%
!! CCTATAAAAAATAGATTTAA+AGG + chr3_3:48616297-48616316 Msa0455610:intron 15.0%
!!! TAATATTTTGGTTATCTTTT+AGG + chr3_3:48616335-48616354 Msa0455610:intron 15.0%
!! TAAATTTCTTATTATGTTTG+AGG + chr3_3:48616933-48616952 Msa0455610:intron 15.0%
!!! TCTTCAAAAAGATAATTTTT+TGG + chr3_3:48616962-48616981 Msa0455610:intron 15.0%
!! TCATCAATATGTATAAATAA+TGG + chr3_3:48617005-48617024 Msa0455610:intron 15.0%
!! AATTTAATATGACAATTAGT+TGG + chr3_3:48617317-48617336 Msa0455610:intron 15.0%
!! TCTATTAATAATACATAGTT+TGG - chr3_3:48617922-48617941 None:intergenic 15.0%
!!! TTATGTATGTTGTTTTTTTT+AGG + chr3_3:48618820-48618839 Msa0455610:three_prime_UTR 15.0%
!!! TATGTATGTTGTTTTTTTTA+GGG + chr3_3:48618821-48618840 Msa0455610:three_prime_UTR 15.0%
!!! AAATTTTGTTATGATAGATT+AGG + chr3_3:48618999-48619018 Msa0455610:three_prime_UTR 15.0%
!!! AATTTTGTTATGATAGATTA+GGG + chr3_3:48619000-48619019 Msa0455610:three_prime_UTR 15.0%
!! TTGTGAAAATCATATATATA+TGG + chr3_3:48619738-48619757 Msa0455610:three_prime_UTR 15.0%
!!! GAGAATAATTAAAACTTTTA+TGG + chr3_3:48619961-48619980 Msa0455610:three_prime_UTR 15.0%
!! AAGGAAATGAATTTAACTAA+GGG - chr3_3:48614563-48614582 None:intergenic 20.0%
!! TAAAATCATAAACACTTTAG+AGG + chr3_3:48614961-48614980 Msa0455610:intron 20.0%
!! CGAAAAACTGATATATTTAT+AGG - chr3_3:48615152-48615171 None:intergenic 20.0%
!!! TAGTGGTTGAAAATTTTATA+GGG - chr3_3:48615211-48615230 None:intergenic 20.0%
!!! TTAAATGATTAAATTTTGGC+AGG + chr3_3:48615293-48615312 Msa0455610:intron 20.0%
!!! TAAATGATTAAATTTTGGCA+GGG + chr3_3:48615294-48615313 Msa0455610:intron 20.0%
!!! CAAAAAGTTAAATTTTGCAA+AGG + chr3_3:48615411-48615430 Msa0455610:intron 20.0%
!!! CTTAAATCTATTTTCAATGT+AGG + chr3_3:48615469-48615488 Msa0455610:intron 20.0%
!! TTACAGATGAAATAAACTAA+AGG + chr3_3:48615525-48615544 Msa0455610:intron 20.0%
!! TACAGATGAAATAAACTAAA+GGG + chr3_3:48615526-48615545 Msa0455610:intron 20.0%
!!! TAAAGGGTTAAATATGTTTT+TGG + chr3_3:48615542-48615561 Msa0455610:intron 20.0%
!!! GAAAAGTTGGTATATTTATA+GGG - chr3_3:48615569-48615588 None:intergenic 20.0%
!!! TGAAAAGTTGGTATATTTAT+AGG - chr3_3:48615570-48615589 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - chr3_3:48615630-48615649 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG + chr3_3:48615633-48615652 Msa0455610:intron 20.0%
!! ATTATTACGATTAAAATTCG+CGG + chr3_3:48616413-48616432 Msa0455610:intron 20.0%
!! ATTGAAAGTAATCTTAATTG+AGG - chr3_3:48616544-48616563 None:intergenic 20.0%
!! ATTAAGATTACTTTCAATGA+TGG + chr3_3:48616546-48616565 Msa0455610:intron 20.0%
!!! ATTTTTGCATCTAAAAGATT+GGG - chr3_3:48616629-48616648 None:intergenic 20.0%
!!! AATTTTTGCATCTAAAAGAT+TGG - chr3_3:48616630-48616649 None:intergenic 20.0%
!! CAAAAATTTGCAATGAAAAT+TGG + chr3_3:48616642-48616661 Msa0455610:intron 20.0%
!! AGATTGTTTAATAACGAAAT+TGG + chr3_3:48616836-48616855 Msa0455610:intron 20.0%
!! TGAAATCACTAAGAAATAAT+GGG - chr3_3:48616890-48616909 None:intergenic 20.0%
!! TTGAAATCACTAAGAAATAA+TGG - chr3_3:48616891-48616910 None:intergenic 20.0%
!!! TTTGAAGTTATGATGAAATT+GGG - chr3_3:48617449-48617468 None:intergenic 20.0%
!! ATGCATTCAAAAATTAAACT+TGG - chr3_3:48617550-48617569 None:intergenic 20.0%
!!! TACATTGTATACTTCTTTTA+GGG - chr3_3:48617621-48617640 None:intergenic 20.0%
!!! ATACATTGTATACTTCTTTT+AGG - chr3_3:48617622-48617641 None:intergenic 20.0%
!! AAACAATTCTCAATCAATAA+GGG + chr3_3:48617729-48617748 Msa0455610:CDS 20.0%
!! ATCACAAAAAATGACATATA+TGG + chr3_3:48617829-48617848 Msa0455610:CDS 20.0%
!!! GAGCTAATACAATTATTTTT+AGG - chr3_3:48617969-48617988 None:intergenic 20.0%
!! ACTTAAACTTTATGTAGATA+TGG + chr3_3:48618082-48618101 Msa0455610:three_prime_UTR 20.0%
!!! TCACACATTTATTTTAAATG+TGG - chr3_3:48618195-48618214 None:intergenic 20.0%
!!! TTTTTATTTTCTTTTTGGTG+TGG + chr3_3:48618482-48618501 Msa0455610:three_prime_UTR 20.0%
!! ATAAAAAGAAAATGTTACAG+AGG - chr3_3:48619094-48619113 None:intergenic 20.0%
! TTAGCAGATATTATGAAATC+TGG - chr3_3:48614211-48614230 None:intergenic 25.0%
! AGATTTCATAATATCTGCTA+AGG + chr3_3:48614210-48614229 Msa0455610:intron 25.0%
! AAGATATGAGAAGGAAATTA+TGG + chr3_3:48614255-48614274 Msa0455610:intron 25.0%
!!! CTGAATTTATTTTGTCTTGT+TGG + chr3_3:48614328-48614347 Msa0455610:intron 25.0%
!!! AGTTTTACTAAGTGTTGTTT+TGG + chr3_3:48614417-48614436 Msa0455610:intron 25.0%
! CAAGGAAATGAATTTAACTA+AGG - chr3_3:48614564-48614583 None:intergenic 25.0%
! AGTAAAACTAATAAGTGACA+AGG - chr3_3:48614582-48614601 None:intergenic 25.0%
! AATGTTGAACCTAACTTAAT+TGG + chr3_3:48614689-48614708 Msa0455610:intron 25.0%
!! ATGATTGTTGTTACTTACTT+TGG + chr3_3:48614762-48614781 Msa0455610:intron 25.0%
! TTTCCTTCCTTAAATTGTTT+GGG - chr3_3:48614833-48614852 None:intergenic 25.0%
! ATTTCCTTCCTTAAATTGTT+TGG - chr3_3:48614834-48614853 None:intergenic 25.0%
!! AGTTGAACGAAAATTTTAGA+GGG - chr3_3:48615182-48615201 None:intergenic 25.0%
!! AAGTTGAACGAAAATTTTAG+AGG - chr3_3:48615183-48615202 None:intergenic 25.0%
!! GTAGTGGTTGAAAATTTTAT+AGG - chr3_3:48615212-48615231 None:intergenic 25.0%
!! AATAGGGGTCATTTAAAATT+TGG - chr3_3:48615349-48615368 None:intergenic 25.0%
!! TAAAAGACACACTTAAGTTT+TGG + chr3_3:48615442-48615461 Msa0455610:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG - chr3_3:48615600-48615619 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG - chr3_3:48615601-48615620 None:intergenic 25.0%
! TTATAGGGATTAAAAGTTGA+AGG - chr3_3:48615614-48615633 None:intergenic 25.0%
! AAAGCTCTTTAGCATTATTT+GGG - chr3_3:48616188-48616207 None:intergenic 25.0%
! AAAAGCTCTTTAGCATTATT+TGG - chr3_3:48616189-48616208 None:intergenic 25.0%
!! AAATAATGCTAAAGAGCTTT+TGG + chr3_3:48616188-48616207 Msa0455610:intron 25.0%
! TCTAGATATGTAAATGTCTT+TGG + chr3_3:48616241-48616260 Msa0455610:intron 25.0%
! CTAGATATGTAAATGTCTTT+GGG + chr3_3:48616242-48616261 Msa0455610:intron 25.0%
!! GCTCTTAGGTTATAATATTT+TGG + chr3_3:48616323-48616342 Msa0455610:intron 25.0%
! AAAGTAATCTTAATTGAGGT+GGG - chr3_3:48616540-48616559 None:intergenic 25.0%
! AATTGGTTATAGAACAATTG+TGG + chr3_3:48616659-48616678 Msa0455610:intron 25.0%
! CATTTCAAATTTACGTATGT+TGG + chr3_3:48616864-48616883 Msa0455610:intron 25.0%
!!! AATATCTTCGTATTTGTTGT+AGG + chr3_3:48617231-48617250 Msa0455610:intron 25.0%
! TTGAAGTTATGATGAAATTG+GGG - chr3_3:48617448-48617467 None:intergenic 25.0%
!!! CTTTGAAGTTATGATGAAAT+TGG - chr3_3:48617450-48617469 None:intergenic 25.0%
! TCGTGAACTTAAATTCAATT+AGG + chr3_3:48617523-48617542 Msa0455610:intron 25.0%
!! ACATTGTATACTTCTTTTAG+GGG - chr3_3:48617620-48617639 None:intergenic 25.0%
! GTATACAATGTATTAAGTGT+TGG + chr3_3:48617629-48617648 Msa0455610:intron 25.0%
! CAAACAATTCTCAATCAATA+AGG + chr3_3:48617728-48617747 Msa0455610:CDS 25.0%
! ACAAAAAATGACATATATGG+TGG + chr3_3:48617832-48617851 Msa0455610:CDS 25.0%
! ATGTCTACATAAAGTTTATC+TGG - chr3_3:48618047-48618066 None:intergenic 25.0%
! AGATAAACTTTATGTAGACA+TGG + chr3_3:48618046-48618065 Msa0455610:three_prime_UTR 25.0%
! AACAATGCATATTATATGCA+GGG + chr3_3:48618137-48618156 Msa0455610:three_prime_UTR 25.0%
! ATAAATTTAACCAGAACACA+CGG - chr3_3:48618376-48618395 None:intergenic 25.0%
!!! TTAAATTTATGGTGTCATAG+TGG + chr3_3:48618386-48618405 Msa0455610:three_prime_UTR 25.0%
! ACACTTAGTTAAAATCATAG+TGG + chr3_3:48619301-48619320 Msa0455610:three_prime_UTR 25.0%
! CACTTAGTTAAAATCATAGT+GGG + chr3_3:48619302-48619321 Msa0455610:three_prime_UTR 25.0%
! AATGATTGTTCAAAGAAATG+AGG + chr3_3:48619368-48619387 Msa0455610:three_prime_UTR 25.0%
! ATGATTGTTCAAAGAAATGA+GGG + chr3_3:48619369-48619388 Msa0455610:three_prime_UTR 25.0%
! TAGAATGTTTAACCTCTATA+CGG - chr3_3:48619538-48619557 None:intergenic 25.0%
! TATATATGAAAGAGACTGAT+TGG + chr3_3:48619602-48619621 Msa0455610:three_prime_UTR 25.0%
! ATATATGAAAGAGACTGATT+GGG + chr3_3:48619603-48619622 Msa0455610:three_prime_UTR 25.0%
! TAATTGTTTCATGTTGAGTA+TGG + chr3_3:48619649-48619668 Msa0455610:three_prime_UTR 25.0%
! CATATAATATACACAGAAGA+AGG + chr3_3:48619674-48619693 Msa0455610:three_prime_UTR 25.0%
! ATATGGCCTGTAAAAAAATA+TGG + chr3_3:48619755-48619774 Msa0455610:three_prime_UTR 25.0%
!!! TACAAGCCATATTTTTTTAC+AGG - chr3_3:48619764-48619783 None:intergenic 25.0%
!! ATTAAAACTTTTATGGACGA+TGG + chr3_3:48619968-48619987 Msa0455610:three_prime_UTR 25.0%
TGTTTCACAAAGATATGAGA+AGG + chr3_3:48614246-48614265 Msa0455610:intron 30.0%
AAGTTGTGTTAAGTAGAGAA+AGG + chr3_3:48614365-48614384 Msa0455610:intron 30.0%
AGTTGTGTTAAGTAGAGAAA+GGG + chr3_3:48614366-48614385 Msa0455610:intron 30.0%
AGAAAGGGTTACAATATTTG+AGG + chr3_3:48614381-48614400 Msa0455610:intron 30.0%
TGCTGTTAAATCAACAACAT+TGG + chr3_3:48614510-48614529 Msa0455610:intron 30.0%
! TAATGTCTTTTATGCGTCTA+TGG + chr3_3:48614637-48614656 Msa0455610:intron 30.0%
GGATGTCAATAAATTGATCT+AGG + chr3_3:48614658-48614677 Msa0455610:intron 30.0%
TAATCCAAGCCAATTAAGTT+AGG - chr3_3:48614701-48614720 None:intergenic 30.0%
! TCTTAAACCTTTAAGGGTTA+TGG + chr3_3:48614788-48614807 Msa0455610:intron 30.0%
! CTTAAACCTTTAAGGGTTAT+GGG + chr3_3:48614789-48614808 Msa0455610:intron 30.0%
GTAGTTACCCAAACAATTTA+AGG + chr3_3:48614823-48614842 Msa0455610:intron 30.0%
TTACCCAAACAATTTAAGGA+AGG + chr3_3:48614827-48614846 Msa0455610:intron 30.0%
TCAAGATTATAACGTTGCTT+AGG + chr3_3:48614988-48615007 Msa0455610:intron 30.0%
TTATAACGTTGCTTAGGTTA+AGG + chr3_3:48614994-48615013 Msa0455610:intron 30.0%
AGGTTAAGGTGAGATATATT+TGG + chr3_3:48615008-48615027 Msa0455610:intron 30.0%
GGTTAAGGTGAGATATATTT+GGG + chr3_3:48615009-48615028 Msa0455610:intron 30.0%
TTAAATGACCCCTATTTACA+AGG + chr3_3:48615353-48615372 Msa0455610:intron 30.0%
TGTTTAGTCCTTGTAAATAG+GGG - chr3_3:48615364-48615383 None:intergenic 30.0%
GTGTTTAGTCCTTGTAAATA+GGG - chr3_3:48615365-48615384 None:intergenic 30.0%
TGTGTTTAGTCCTTGTAAAT+AGG - chr3_3:48615366-48615385 None:intergenic 30.0%
!! CTTCTAAATTTGCTAAGCAT+TGG + chr3_3:48616091-48616110 Msa0455610:intron 30.0%
AAAGTCTTGAAATATGCACT+TGG - chr3_3:48616156-48616175 None:intergenic 30.0%
TTTAGCATTATTTGGGTAAG+TGG - chr3_3:48616181-48616200 None:intergenic 30.0%
!! TGATTAGTTTGTTACCTTGA+TGG - chr3_3:48616214-48616233 None:intergenic 30.0%
GAAAGTAATCTTAATTGAGG+TGG - chr3_3:48616541-48616560 None:intergenic 30.0%
TAGTTCATAAGATCTACCAT+TGG + chr3_3:48616603-48616622 Msa0455610:intron 30.0%
!!! ACACTTGTTCTTTGTTTTTC+AGG - chr3_3:48616693-48616712 None:intergenic 30.0%
AGAAACATACTCAAAGCATA+AGG + chr3_3:48617115-48617134 Msa0455610:CDS 30.0%
! AGCATAAGGAATTTTCTCAA+TGG + chr3_3:48617129-48617148 Msa0455610:CDS 30.0%
! GCATAAGGAATTTTCTCAAT+GGG + chr3_3:48617130-48617149 Msa0455610:CDS 30.0%
! CATAAGGAATTTTCTCAATG+GGG + chr3_3:48617131-48617150 Msa0455610:CDS 30.0%
! GTACGTATCTTTTTCTTTTC+TGG + chr3_3:48617194-48617213 Msa0455610:intron 30.0%
ATAGATACTGCTTCATAGAA+AGG + chr3_3:48617357-48617376 Msa0455610:intron 30.0%
TTTCATCATAACTTCAAAGC+TGG + chr3_3:48617451-48617470 Msa0455610:CDS 30.0%
! TTTAAGTTCACGATCAACAT+AGG - chr3_3:48617516-48617535 None:intergenic 30.0%
TGTCATCAATGATTAGCAAT+GGG + chr3_3:48617671-48617690 Msa0455610:CDS 30.0%
ACATAAAGTTTATCTGGACT+GGG - chr3_3:48618041-48618060 None:intergenic 30.0%
TACATAAAGTTTATCTGGAC+TGG - chr3_3:48618042-48618061 None:intergenic 30.0%
GAACAATGCATATTATATGC+AGG + chr3_3:48618136-48618155 Msa0455610:three_prime_UTR 30.0%
ACAATGCATATTATATGCAG+GGG + chr3_3:48618138-48618157 Msa0455610:three_prime_UTR 30.0%
! ATTTTAAATGTGGAGAAGTG+AGG - chr3_3:48618185-48618204 None:intergenic 30.0%
!!! ACACACCACTAGATTTTTTT+GGG - chr3_3:48618241-48618260 None:intergenic 30.0%
!!! AACACACCACTAGATTTTTT+TGG - chr3_3:48618242-48618261 None:intergenic 30.0%
! GTGTGTTCTGGTTAAATTTA+TGG + chr3_3:48618375-48618394 Msa0455610:three_prime_UTR 30.0%
GCAATATCACCAAATACAAT+AGG - chr3_3:48618660-48618679 None:intergenic 30.0%
!!! TGTTTTTTTTAGGGAGCTTT+TGG + chr3_3:48618830-48618849 Msa0455610:three_prime_UTR 30.0%
ATTGAACTTTGTTAGTGTGT+TGG + chr3_3:48618855-48618874 Msa0455610:three_prime_UTR 30.0%
GAGCAATTAAGGTATAAAAC+AGG - chr3_3:48618896-48618915 None:intergenic 30.0%
ACATTTGCAAAGAGCAATTA+AGG - chr3_3:48618907-48618926 None:intergenic 30.0%
TTGTTATGATAGATTAGGGT+TGG + chr3_3:48619004-48619023 Msa0455610:three_prime_UTR 30.0%
GTTAGCAAAACTCGTAAAAT+AGG + chr3_3:48619153-48619172 Msa0455610:three_prime_UTR 30.0%
AGAATCACATATCCTTTACT+CGG - chr3_3:48619211-48619230 None:intergenic 30.0%
ATCGAAAATTATCCGTATAG+AGG + chr3_3:48619523-48619542 Msa0455610:three_prime_UTR 30.0%
CTTCGAATTAGTATTTACAG+TGG - chr3_3:48619787-48619806 None:intergenic 30.0%
CTGTAAATACTAATTCGAAG+TGG + chr3_3:48619787-48619806 Msa0455610:three_prime_UTR 30.0%
AATACTAATTCGAAGTGGAA+AGG + chr3_3:48619792-48619811 Msa0455610:three_prime_UTR 30.0%
! ATTTTGGATTATGCCAAATG+AGG + chr3_3:48619831-48619850 Msa0455610:three_prime_UTR 30.0%
! TTTTGGATTATGCCAAATGA+GGG + chr3_3:48619832-48619851 Msa0455610:three_prime_UTR 30.0%
ATAATATCTGCTAAGGTAGC+TGG + chr3_3:48614217-48614236 Msa0455610:intron 35.0%
GAGAAGGAAATTATGGAGTT+TGG + chr3_3:48614262-48614281 Msa0455610:intron 35.0%
GTAGCTAATAAAGTGAGCAT+TGG - chr3_3:48614298-48614317 None:intergenic 35.0%
TCTTGTTGGAATGTTGCTAA+AGG + chr3_3:48614342-48614361 Msa0455610:intron 35.0%
!! AGGAAAAGCGCTTGATAAAT+AGG - chr3_3:48614457-48614476 None:intergenic 35.0%
! TTTATCAAGCGCTTTTCCTA+AGG + chr3_3:48614458-48614477 Msa0455610:intron 35.0%
! CTTTTCCTAAGGAGAGATAA+AGG + chr3_3:48614469-48614488 Msa0455610:intron 35.0%
ATCTTCCTTTATCTCTCCTT+AGG - chr3_3:48614477-48614496 None:intergenic 35.0%
GAGATAAAGGAAGATTTCCA+AGG + chr3_3:48614482-48614501 Msa0455610:intron 35.0%
!! TTTAACTAAGGGCACTAAAG+AGG - chr3_3:48614552-48614571 None:intergenic 35.0%
TGAACCTAACTTAATTGGCT+TGG + chr3_3:48614694-48614713 Msa0455610:intron 35.0%
TTGGCGTTCTTAAACCTTTA+AGG + chr3_3:48614781-48614800 Msa0455610:intron 35.0%
TGGCGTTCTTAAACCTTTAA+GGG + chr3_3:48614782-48614801 Msa0455610:intron 35.0%
GAGGGACTAAAATGAAAAGT+TGG - chr3_3:48615582-48615601 None:intergenic 35.0%
! TACGTTTTATGCTCTCTTAG+AGG + chr3_3:48616068-48616087 Msa0455610:intron 35.0%
ACCTTGAATCTCTTGCAAAA+TGG - chr3_3:48616120-48616139 None:intergenic 35.0%
AGATTTAAAGGTGAGCTCTT+AGG + chr3_3:48616309-48616328 Msa0455610:intron 35.0%
ATAGCGAATGTACCAAGATA+TGG + chr3_3:48617049-48617068 Msa0455610:intron 35.0%
AGTAGAAAATGCATCCAAGT+TGG + chr3_3:48617079-48617098 Msa0455610:CDS 35.0%
GTAGAAAATGCATCCAAGTT+GGG + chr3_3:48617080-48617099 Msa0455610:CDS 35.0%
! TGCTTTGAGTATGTTTCTTC+TGG - chr3_3:48617113-48617132 None:intergenic 35.0%
GTACTTGAAGAATTGTGTCA+TGG - chr3_3:48617178-48617197 None:intergenic 35.0%
! TTGGTCTTCATTGCAGATAA+GGG + chr3_3:48617648-48617667 Msa0455610:intron 35.0%
GTGTCATCAATGATTAGCAA+TGG + chr3_3:48617670-48617689 Msa0455610:CDS 35.0%
TTCTTCATGGATGAAGAGAA+GGG + chr3_3:48617763-48617782 Msa0455610:CDS 35.0%
TTCTTTGCTTGTAGCTTATG+AGG + chr3_3:48617855-48617874 Msa0455610:CDS 35.0%
TACCAACTGAGATAAGTTCA+CGG - chr3_3:48618115-48618134 None:intergenic 35.0%
CTTGACCCAAAAAAATCTAG+TGG + chr3_3:48618233-48618252 Msa0455610:three_prime_UTR 35.0%
ACAAAAACACCTCAACTGAT+AGG - chr3_3:48618415-48618434 None:intergenic 35.0%
TCGTGTTGTGTTTGTATTTG+TGG + chr3_3:48618543-48618562 Msa0455610:three_prime_UTR 35.0%
CGTGTTGTGTTTGTATTTGT+GGG + chr3_3:48618544-48618563 Msa0455610:three_prime_UTR 35.0%
TTCTATTCTTGATCCGAGAT+TGG + chr3_3:48618597-48618616 Msa0455610:three_prime_UTR 35.0%
TTGAAACATGCAGATCTCAA+TGG - chr3_3:48618709-48618728 None:intergenic 35.0%
ATTGAGATCTGCATGTTTCA+AGG + chr3_3:48618708-48618727 Msa0455610:three_prime_UTR 35.0%
AATTAACACAGAGAACCATC+CGG - chr3_3:48618760-48618779 None:intergenic 35.0%
! TGGTTCTCTGTGTTAATTTG+TGG + chr3_3:48618762-48618781 Msa0455610:three_prime_UTR 35.0%
TAAGGTATAAAACAGGCGAA+TGG - chr3_3:48618889-48618908 None:intergenic 35.0%
! ATTCTCGTTTGAGTTATACC+TGG + chr3_3:48619054-48619073 Msa0455610:three_prime_UTR 35.0%
! TTCTCGTTTGAGTTATACCT+GGG + chr3_3:48619055-48619074 Msa0455610:three_prime_UTR 35.0%
!! AGGGAGATGTTATTTCTCAA+AGG + chr3_3:48619245-48619264 Msa0455610:three_prime_UTR 35.0%
AAAGGAACTAACTCAAAACG+TGG + chr3_3:48619263-48619282 Msa0455610:three_prime_UTR 35.0%
AAGGAACTAACTCAAAACGT+GGG + chr3_3:48619264-48619283 Msa0455610:three_prime_UTR 35.0%
ATTGTTCAAAGAAATGAGGG+AGG + chr3_3:48619372-48619391 Msa0455610:three_prime_UTR 35.0%
! ATAGTGGAGTTGTACACAAA+AGG + chr3_3:48619406-48619425 Msa0455610:three_prime_UTR 35.0%
ATAATAGCCACCTTGGTAAA+GGG - chr3_3:48619493-48619512 None:intergenic 35.0%
! ATACGGATAATTTTCGATCC+AGG - chr3_3:48619521-48619540 None:intergenic 35.0%
! TTCCACGGAACATGAAATTT+TGG + chr3_3:48619815-48619834 Msa0455610:three_prime_UTR 35.0%
ATCCAAAATTTCATGTTCCG+TGG - chr3_3:48619820-48619839 None:intergenic 35.0%
AGCTAACAAAAACCCTCATT+TGG - chr3_3:48619847-48619866 None:intergenic 35.0%
AGCTCATCAAAGTTTACAAG+AGG + chr3_3:48619863-48619882 Msa0455610:three_prime_UTR 35.0%
! AAAACTTTTATGGACGATGG+TGG + chr3_3:48619971-48619990 Msa0455610:three_prime_UTR 35.0%
GATTTAACAGCAACAGACCT+TGG - chr3_3:48614502-48614521 None:intergenic 40.0%
ATGAAGCCCATAACCCTTAA+AGG - chr3_3:48614798-48614817 None:intergenic 40.0%
GCTATAGGGACTAAAAGTAG+TGG - chr3_3:48615228-48615247 None:intergenic 40.0%
GTAGTGATTAAGTGGAGAGA+AGG + chr3_3:48615262-48615281 Msa0455610:intron 40.0%
AGGGTAAAATGCCAGGATTA+AGG + chr3_3:48615313-48615332 Msa0455610:intron 40.0%
TGCCAGGATTAAGGAATACA+TGG + chr3_3:48615322-48615341 Msa0455610:intron 40.0%
GTCCATGTATTCCTTAATCC+TGG - chr3_3:48615327-48615346 None:intergenic 40.0%
GTGTATCTTTCAGATGATGC+TGG + chr3_3:48616036-48616055 Msa0455610:intron 40.0%
!! GCCATTTTGCAAGAGATTCA+AGG + chr3_3:48616116-48616135 Msa0455610:intron 40.0%
AGAGATTCAAGGTTGAACCT+AGG + chr3_3:48616127-48616146 Msa0455610:intron 40.0%
! AAATATGCACTTGGTGACCT+AGG - chr3_3:48616147-48616166 None:intergenic 40.0%
! TAAAGAGCTTTTGGCCATCA+AGG + chr3_3:48616197-48616216 Msa0455610:intron 40.0%
TGTACTACACTCAACCCTAT+TGG - chr3_3:48616447-48616466 None:intergenic 40.0%
GTGGGTCAGATACTAAATGT+GGG - chr3_3:48616522-48616541 None:intergenic 40.0%
CATCTAAAAGATTGGGCCAA+TGG - chr3_3:48616622-48616641 None:intergenic 40.0%
CTACTCGACTTTCCATATCT+TGG - chr3_3:48617064-48617083 None:intergenic 40.0%
TTCTGGTACTTTACCCAACT+TGG - chr3_3:48617096-48617115 None:intergenic 40.0%
! GTCAGTTGTCGTTCTGAATA+TGG + chr3_3:48617290-48617309 Msa0455610:intron 40.0%
ACAATGCCAGAGATGAAGAT+GGG + chr3_3:48617380-48617399 Msa0455610:CDS 40.0%
AACAAACCCATCTTCATCTC+TGG - chr3_3:48617389-48617408 None:intergenic 40.0%
TATGCCCACCTTGGTATATT+TGG + chr3_3:48617408-48617427 Msa0455610:CDS 40.0%
!! GTTGGTCTTCATTGCAGATA+AGG + chr3_3:48617647-48617666 Msa0455610:intron 40.0%
CTTCTTCATGGATGAAGAGA+AGG + chr3_3:48617762-48617781 Msa0455610:CDS 40.0%
ACATGAAATTGCCTTTGTGC+AGG + chr3_3:48617786-48617805 Msa0455610:CDS 40.0%
! GTGATATTTTCAAAGCCCTG+AGG - chr3_3:48617814-48617833 None:intergenic 40.0%
! AAAGTTTATCTGGACTGGGA+GGG - chr3_3:48618037-48618056 None:intergenic 40.0%
! TAAAGTTTATCTGGACTGGG+AGG - chr3_3:48618038-48618057 None:intergenic 40.0%
ACCAACTGAGATAAGTTCAC+GGG - chr3_3:48618114-48618133 None:intergenic 40.0%
GTGAACTTATCTCAGTTGGT+AGG + chr3_3:48618114-48618133 Msa0455610:three_prime_UTR 40.0%
TGCATATTATATGCAGGGGT+CGG + chr3_3:48618142-48618161 Msa0455610:three_prime_UTR 40.0%
!! AATGGCACTGATGTGAAAGA+GGG - chr3_3:48618287-48618306 None:intergenic 40.0%
!! AAATGGCACTGATGTGAAAG+AGG - chr3_3:48618288-48618307 None:intergenic 40.0%
GCAAGCTTCTGATATGCAAA+TGG - chr3_3:48618305-48618324 None:intergenic 40.0%
! TTGCATATCAGAAGCTTGCT+AGG + chr3_3:48618306-48618325 Msa0455610:three_prime_UTR 40.0%
!! TTGTTTTGCTCGTGATCTTG+TGG + chr3_3:48618449-48618468 Msa0455610:three_prime_UTR 40.0%
!! TTTCTTTTTGGTGTGGTCGA+TGG + chr3_3:48618489-48618508 Msa0455610:three_prime_UTR 40.0%
TATCTTCAACCAGCCAATCT+CGG - chr3_3:48618613-48618632 None:intergenic 40.0%
! ATTGGCTGGTTGAAGATATG+TGG + chr3_3:48618615-48618634 Msa0455610:three_prime_UTR 40.0%
GTGCGTTCACCTATTGTATT+TGG + chr3_3:48618648-48618667 Msa0455610:three_prime_UTR 40.0%
!! TAGATTAGGGTTGGTACACT+TGG + chr3_3:48619013-48619032 Msa0455610:three_prime_UTR 40.0%
ATATCCTTTACTCGGTTGAG+GGG - chr3_3:48619203-48619222 None:intergenic 40.0%
CATATCCTTTACTCGGTTGA+GGG - chr3_3:48619204-48619223 None:intergenic 40.0%
ACATATCCTTTACTCGGTTG+AGG - chr3_3:48619205-48619224 None:intergenic 40.0%
GCTATGATCTCTACTCTCAA+AGG + chr3_3:48619344-48619363 Msa0455610:three_prime_UTR 40.0%
ATGAGTCATGTCGAGGAAAT+AGG + chr3_3:48619438-48619457 Msa0455610:three_prime_UTR 40.0%
TGAGTCATGTCGAGGAAATA+GGG + chr3_3:48619439-48619458 Msa0455610:three_prime_UTR 40.0%
TAATAGCCACCTTGGTAAAG+GGG - chr3_3:48619492-48619511 None:intergenic 40.0%
CATAATAGCCACCTTGGTAA+AGG - chr3_3:48619494-48619513 None:intergenic 40.0%
! GGTGTTGTGTTAGAAGAAAC+TGG + chr3_3:48619884-48619903 Msa0455610:three_prime_UTR 40.0%
GTTGTGTTAGAAGAAACTGG+TGG + chr3_3:48619887-48619906 Msa0455610:three_prime_UTR 40.0%
! CACGTCACTGATTGGCTATA+GGG - chr3_3:48615242-48615261 None:intergenic 45.0%
ATCACTACCACGTCACTGAT+TGG - chr3_3:48615250-48615269 None:intergenic 45.0%
! GTGACGTGGTAGTGATTAAG+TGG + chr3_3:48615254-48615273 Msa0455610:intron 45.0%
! TTTTGGCAGGGTAAAATGCC+AGG + chr3_3:48615306-48615325 Msa0455610:intron 45.0%
! CTAGAGTGCCACAACATCAA+TGG + chr3_3:48616472-48616491 Msa0455610:intron 45.0%
CGATTCGACCATTGATGTTG+TGG - chr3_3:48616483-48616502 None:intergenic 45.0%
GGTGGGTCAGATACTAAATG+TGG - chr3_3:48616523-48616542 None:intergenic 45.0%
GACAATGCCAGAGATGAAGA+TGG + chr3_3:48617379-48617398 Msa0455610:CDS 45.0%
CGAGCCAAATATACCAAGGT+GGG - chr3_3:48617415-48617434 None:intergenic 45.0%
ACGAGCCAAATATACCAAGG+TGG - chr3_3:48617416-48617435 None:intergenic 45.0%
CTCACGAGCCAAATATACCA+AGG - chr3_3:48617419-48617438 None:intergenic 45.0%
AGCTGGAGCTATGAATTCAC+TGG + chr3_3:48617468-48617487 Msa0455610:CDS 45.0%
GGATGCACTTTGCTTCTTCA+TGG + chr3_3:48617750-48617769 Msa0455610:CDS 45.0%
TGGAGGAAGTTTGTAGTGAG+AGG - chr3_3:48617995-48618014 None:intergenic 45.0%
! AAGTTTATCTGGACTGGGAG+GGG - chr3_3:48618036-48618055 None:intergenic 45.0%
TCCCGTGAACTTATCTCAGT+TGG + chr3_3:48618110-48618129 Msa0455610:three_prime_UTR 45.0%
GCATATTATATGCAGGGGTC+GGG + chr3_3:48618143-48618162 Msa0455610:three_prime_UTR 45.0%
CATATTATATGCAGGGGTCG+GGG + chr3_3:48618144-48618163 Msa0455610:three_prime_UTR 45.0%
! ATGTGTGAGCTTTAGCCACT+AGG + chr3_3:48618207-48618226 Msa0455610:three_prime_UTR 45.0%
!! TTTTGGGTCAAGTAGCCTAG+TGG - chr3_3:48618225-48618244 None:intergenic 45.0%
GTCGAAACCACATGCTTCAT+TGG - chr3_3:48618354-48618373 None:intergenic 45.0%
TAGTGGAAGCCTATCAGTTG+AGG + chr3_3:48618403-48618422 Msa0455610:three_prime_UTR 45.0%
!! TGTTTTTGTTAGACGCCCTC+TGG + chr3_3:48618426-48618445 Msa0455610:three_prime_UTR 45.0%
TCACGAGCAAAACAACCAGA+GGG - chr3_3:48618444-48618463 None:intergenic 45.0%
ATCACGAGCAAAACAACCAG+AGG - chr3_3:48618445-48618464 None:intergenic 45.0%
ACAAACACAACACGACAGTG+AGG - chr3_3:48618538-48618557 None:intergenic 45.0%
ATTCTTGATCCGAGATTGGC+TGG + chr3_3:48618601-48618620 Msa0455610:three_prime_UTR 45.0%
GGAACATCTGAGAATCGAAG+AGG - chr3_3:48618682-48618701 None:intergenic 45.0%
CATGCAGATCTCAATGGATC+TGG - chr3_3:48618703-48618722 None:intergenic 45.0%
! CTGCATGTTTCAAGGCATCA+AGG + chr3_3:48618716-48618735 Msa0455610:three_prime_UTR 45.0%
GTATGCCTCAACTCTAGTAC+CGG + chr3_3:48618738-48618757 Msa0455610:three_prime_UTR 45.0%
! GTTTGAGTTATACCTGGGTC+AGG + chr3_3:48619060-48619079 Msa0455610:three_prime_UTR 45.0%
TATACCTGGGTCAGGTCTAA+TGG + chr3_3:48619068-48619087 Msa0455610:three_prime_UTR 45.0%
!! ATTCTAGAGTAACCGAGCGA+GGG + chr3_3:48619226-48619245 Msa0455610:three_prime_UTR 45.0%
GAAATAACATCTCCCTCGCT+CGG - chr3_3:48619241-48619260 None:intergenic 45.0%
GGAGGATAGACGATCTATAG+TGG + chr3_3:48619390-48619409 Msa0455610:three_prime_UTR 45.0%
CTCGACATGACTCATTGACA+AGG - chr3_3:48619433-48619452 None:intergenic 45.0%
CTTGTCAATGAGTCATGTCG+AGG + chr3_3:48619431-48619450 Msa0455610:three_prime_UTR 45.0%
TAGGGCTGAAGTTGAACGTA+AGG + chr3_3:48619457-48619476 Msa0455610:three_prime_UTR 45.0%
GGTTTGCATAATAGCCACCT+TGG - chr3_3:48619500-48619519 None:intergenic 45.0%
AGGTGGCTATTATGCAAACC+TGG + chr3_3:48619500-48619519 Msa0455610:three_prime_UTR 45.0%
TTGGGCAGAGATGAAGGAAA+TGG + chr3_3:48619621-48619640 Msa0455610:three_prime_UTR 45.0%
TTCGAAGTGGAAAGGTTCCA+CGG + chr3_3:48619800-48619819 Msa0455610:three_prime_UTR 45.0%
!! TATATATATATATATGTATA+TGG + chr3_3:48615108-48615127 Msa0455610:intron 5.0%
!!! AATTTTAAATGATTAAATTT+TGG + chr3_3:48615289-48615308 Msa0455610:intron 5.0%
!! CAAAAATTAAATTAAAAATA+GGG - chr3_3:48615660-48615679 None:intergenic 5.0%
!! ACAAAAATTAAATTAAAAAT+AGG - chr3_3:48615661-48615680 None:intergenic 5.0%
!!! TAAAAAATTCTAAATTTTTT+TGG + chr3_3:48615827-48615846 Msa0455610:intron 5.0%
!!! AAAAAATTCTAAATTTTTTT+GGG + chr3_3:48615828-48615847 Msa0455610:intron 5.0%
!!! TTTTATTTTTATTTTCTTTT+TGG + chr3_3:48618477-48618496 Msa0455610:three_prime_UTR 5.0%
! CCACGTCACTGATTGGCTAT+AGG - chr3_3:48615243-48615262 None:intergenic 50.0%
CCTATAGCCAATCAGTGACG+TGG + chr3_3:48615240-48615259 Msa0455610:intron 50.0%
TTCGCGGCATAGCAACCAAT+AGG + chr3_3:48616429-48616448 Msa0455610:intron 50.0%
TCGCGGCATAGCAACCAATA+GGG + chr3_3:48616430-48616449 Msa0455610:intron 50.0%
AGGGTTGAGTGTAGTACACG+CGG + chr3_3:48616449-48616468 Msa0455610:intron 50.0%
!! TGGGTTTGTTATGCCCACCT+TGG + chr3_3:48617399-48617418 Msa0455610:CDS 50.0%
! AGTTTATCTGGACTGGGAGG+GGG - chr3_3:48618035-48618054 None:intergenic 50.0%
AAAGAGGGTGGTGCAGTTGT+TGG - chr3_3:48618272-48618291 None:intergenic 50.0%
TAGGTCAGCGCATGTTTCTC+CGG + chr3_3:48618325-48618344 Msa0455610:three_prime_UTR 50.0%
CCACATGCTTCATTGGAGAC+CGG - chr3_3:48618347-48618366 None:intergenic 50.0%
!! CTTTTTGGTGTGGTCGATGG+TGG + chr3_3:48618492-48618511 Msa0455610:three_prime_UTR 50.0%
! TCGATGGTGGTGTATGTGTG+TGG + chr3_3:48618505-48618524 Msa0455610:three_prime_UTR 50.0%
TTTGTGGGCTTGCGACAGTT+TGG + chr3_3:48618559-48618578 Msa0455610:three_prime_UTR 50.0%
ACCATCCGGTACTAGAGTTG+AGG - chr3_3:48618746-48618765 None:intergenic 50.0%
TCATAGACGCAACCCAGCAA+AGG - chr3_3:48618974-48618993 None:intergenic 50.0%
TTGCTGGGTTGCGTCTATGA+TGG + chr3_3:48618974-48618993 Msa0455610:three_prime_UTR 50.0%
TGCTGGGTTGCGTCTATGAT+GGG + chr3_3:48618975-48618994 Msa0455610:three_prime_UTR 50.0%
!! GATTCTAGAGTAACCGAGCG+AGG + chr3_3:48619225-48619244 Msa0455610:three_prime_UTR 50.0%
CTCAAAACGTGGGTCGTCAA+AGG + chr3_3:48619274-48619293 Msa0455610:three_prime_UTR 50.0%
GACTGATTGGGCAGAGATGA+AGG + chr3_3:48619615-48619634 Msa0455610:three_prime_UTR 50.0%
AGAAGGCCAAAGTGCAGAGA+TGG + chr3_3:48619691-48619710 Msa0455610:three_prime_UTR 50.0%
TCAGCTCCATCTCTGCACTT+TGG - chr3_3:48619700-48619719 None:intergenic 50.0%
!! AGAGGAAGGTGTTGGCTTGG+AGG - chr3_3:48618012-48618031 None:intergenic 55.0%
! GTGGAGAAGTGAGGTGTCCA+GGG - chr3_3:48618176-48618195 None:intergenic 55.0%
! TGTGGAGAAGTGAGGTGTCC+AGG - chr3_3:48618177-48618196 None:intergenic 55.0%
GGGTGGTGCAGTTGTTGGAA+CGG - chr3_3:48618267-48618286 None:intergenic 55.0%
!! GGCACTGATGTGAAAGAGGG+TGG - chr3_3:48618284-48618303 None:intergenic 55.0%
CCGGTCTCCAATGAAGCATG+TGG + chr3_3:48618344-48618363 Msa0455610:three_prime_UTR 55.0%
GTGGTTTCGACCGTGTGTTC+TGG + chr3_3:48618363-48618382 Msa0455610:three_prime_UTR 55.0%
! GCCTCAACTCTAGTACCGGA+TGG + chr3_3:48618742-48618761 Msa0455610:three_prime_UTR 55.0%
ATGCTTGTACGCGCCTTTGC+TGG + chr3_3:48618958-48618977 Msa0455610:three_prime_UTR 55.0%
TGCTTGTACGCGCCTTTGCT+GGG + chr3_3:48618959-48618978 Msa0455610:three_prime_UTR 55.0%
CACCTTGGTAAAGGGGATCG+TGG - chr3_3:48619485-48619504 None:intergenic 55.0%
CACGATCCCCTTTACCAAGG+TGG + chr3_3:48619483-48619502 Msa0455610:three_prime_UTR 55.0%
GTGCAGAGATGGAGCTGAGT+TGG + chr3_3:48619702-48619721 Msa0455610:three_prime_UTR 55.0%
TGCCTTTGTGCAGGCTCCTC+AGG + chr3_3:48617795-48617814 Msa0455610:CDS 60.0%
GCCTTTGTGCAGGCTCCTCA+GGG + chr3_3:48617796-48617815 Msa0455610:CDS 60.0%
!! GGGAGAGGAAGGTGTTGGCT+TGG - chr3_3:48618015-48618034 None:intergenic 60.0%
GAGGCCATTAGACCTGACCC+AGG - chr3_3:48619075-48619094 None:intergenic 60.0%
GAGGCCCCTCAACCGAGTAA+AGG + chr3_3:48619196-48619215 Msa0455610:three_prime_UTR 60.0%
CGCCACGATCCCCTTTACCA+AGG + chr3_3:48619480-48619499 Msa0455610:three_prime_UTR 60.0%
GCCCTGAGGAGCCTGCACAA+AGG - chr3_3:48617800-48617819 None:intergenic 65.0%
! GGAGGGGGAGAGGAAGGTGT+TGG - chr3_3:48618020-48618039 None:intergenic 65.0%
! ATCTGGACTGGGAGGGGGAG+AGG - chr3_3:48618030-48618049 None:intergenic 65.0%
GGACTGGGAGGGGGAGAGGA+AGG - chr3_3:48618026-48618045 None:intergenic 70.0%
AGGGGTCGGGGTTCGAACCC+TGG + chr3_3:48618156-48618175 Msa0455610:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 48614181 48620014 48614181 ID=Msa0455610;Name=Msa0455610
chr3_3 mRNA 48614181 48620014 48614181 ID=Msa0455610-mRNA-1;Parent=Msa0455610;Name=Msa0455610-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0.66|0.75|1|1|1|4|2129|166
chr3_3 exon 48614181 48614189 48614181 ID=Msa0455610-mRNA-1:exon:9069;Parent=Msa0455610-mRNA-1
chr3_3 exon 48617053 48617193 48617053 ID=Msa0455610-mRNA-1:exon:9070;Parent=Msa0455610-mRNA-1
chr3_3 exon 48617361 48617489 48617361 ID=Msa0455610-mRNA-1:exon:9071;Parent=Msa0455610-mRNA-1
chr3_3 exon 48617664 48620014 48617664 ID=Msa0455610-mRNA-1:exon:9072;Parent=Msa0455610-mRNA-1
chr3_3 CDS 48614181 48614189 48614181 ID=Msa0455610-mRNA-1:cds;Parent=Msa0455610-mRNA-1
chr3_3 CDS 48617053 48617193 48617053 ID=Msa0455610-mRNA-1:cds;Parent=Msa0455610-mRNA-1
chr3_3 CDS 48617361 48617489 48617361 ID=Msa0455610-mRNA-1:cds;Parent=Msa0455610-mRNA-1
chr3_3 CDS 48617664 48617885 48617664 ID=Msa0455610-mRNA-1:cds;Parent=Msa0455610-mRNA-1
chr3_3 three_prime_UTR 48617886 48620014 48617886 ID=Msa0455610-mRNA-1:three_prime_utr;Parent=Msa0455610-mRNA-1
Gene Sequence

>Msa0455610

ATGTTGAAGCGAATGTACCAAGATATGGAAAGTCGAGTAGAAAATGCATCCAAGTTGGGTAAAGTACCAGAAGAAACATACTCAAAGCATAAGGAATTTTCTCAATGGGGTTCATATTCATCAAGACGTGACCATGACACAATTCTTCAAATACTGCTTCATAGAAAGGACAATGCCAGAGATGAAGATGGGTTTGTTATGCCCACCTTGGTATATTTGGCTCGTGAGAAAAGACCCCAATTTCATCATAACTTCAAAGCTGGAGCTATGAATTCACTGATAAGGGTGTCATCAATGATTAGCAATGGGAAAATTATTCTCAATGTAGATTGTGACATGTACTCAAACAATTCTCAATCAATAAGGGATGCACTTTGCTTCTTCATGGATGAAGAGAAGGGACATGAAATTGCCTTTGTGCAGGCTCCTCAGGGCTTTGAAAATATCACAAAAAATGACATATATGGTGGTTCTTTGCTTGTAGCTTATGAGGTAAAGTAG
Protein sequence

>Msa0455610

MLKRMYQDMESRVENASKLGKVPEETYSKHKEFSQWGSYSSRRDHDTILQILLHRKDNARDEDGFVMPTLVYLAREKRPQFHHNFKAGAMNSLIRVSSMISNGKIILNVDCDMYSNNSQSIRDALCFFMDEEKGHEIAFVQAPQGFENITKNDIYGGSLLVAYEVK*