AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1202730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1202730 MtrunA17_Chr8g0372901 92.541 429 17 2 1 427 1 416 0.0 788
Msa1202730 MtrunA17_Chr8g0372891 90.909 55 5 0 430 484 1 55 9.18e-31 113
Msa1202730 MtrunA17_Chr6g0459721 25.581 301 203 6 113 405 128 415 3.62e-21 95.5
Msa1202730 MtrunA17_Chr5g0404241 25.581 301 203 6 113 405 134 421 4.75e-21 95.1
Msa1202730 MtrunA17_Chr1g0161851 23.105 277 192 6 137 405 99 362 9.31e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1202730 AT5G66470.2 67.677 396 103 4 37 424 46 424 0.0 560
Msa1202730 AT5G66470.1 67.677 396 103 4 37 424 46 424 0.0 560
Msa1202730 AT1G30960.1 26.246 301 201 6 113 405 150 437 2.10e-22 100
Msa1202730 AT3G12080.1 24.390 246 139 4 67 283 123 350 2.21e-11 66.6
Msa1202730 AT3G12080.2 24.390 246 139 4 67 283 123 350 2.51e-11 66.2

Find 107 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGCAGAAAATTATCATTAT+TGG 0.131215 8_1:-56385015 Msa1202730:CDS
TGTGAAACCTGACCGGAATT+TGG 0.201125 8_1:-56388527 Msa1202730:CDS
CTGTAACTATTGACAACTTT+TGG 0.219844 8_1:+56387463 None:intergenic
AAGTAAAGGTTAAAGAAAAT+TGG 0.277803 8_1:-56384589 Msa1202730:CDS
ACACCAAACTGTCTCGAGTA+TGG 0.280705 8_1:-56384294 Msa1202730:CDS
TTTCTTAAGCACTCTGGTTA+TGG 0.300154 8_1:-56384551 Msa1202730:CDS
ATGTTCTGGCTCAGATTATC+AGG 0.305498 8_1:-56387403 Msa1202730:intron
CGAGTTCTTTGTATATGTTC+TGG 0.312570 8_1:-56387417 Msa1202730:CDS
TCTGGTTATGGAGGTCAAAT+AGG 0.323623 8_1:-56384539 Msa1202730:CDS
TGACCATACTTGGCACTAAC+TGG 0.325853 8_1:+56386372 None:intergenic
TGTATAAAATCTTTAGCATT+TGG 0.328995 8_1:+56385063 None:intergenic
TGCTTTGGAGGGAGAGTGTT+TGG 0.347383 8_1:+56388642 None:intergenic
GTGAAACCTGACCGGAATTT+GGG 0.347566 8_1:-56388526 Msa1202730:CDS
TTTGACTTTAAACATGCCTT+TGG 0.359214 8_1:+56386288 None:intergenic
GGTGAATGTTATAAGCTATA+AGG 0.364966 8_1:-56385091 Msa1202730:CDS
ATTCCAGTTAGTGCCAAGTA+TGG 0.379883 8_1:-56386375 Msa1202730:CDS
TTGTTTGGTTGAGAATGCTT+TGG 0.401276 8_1:+56388627 None:intergenic
AGTGTACTCTTCCCAACGTT+TGG 0.407566 8_1:+56387504 None:intergenic
GCAGGATATGTGGCTTTACT+TGG 0.408671 8_1:-56387531 Msa1202730:intron
ACTCGATGCCTTGTTGTTTG+AGG 0.409336 8_1:+56387435 None:intergenic
TTTATCTTTGTGGCCTCCTA+TGG 0.409845 8_1:+56386590 None:intergenic
TTGATTCGGTTCGGTTATGA+AGG 0.420455 8_1:+56388686 None:intergenic
AACCCATACTCGAGACAGTT+TGG 0.426168 8_1:+56384291 None:intergenic
CAACACTCTTTCTTCGCCGT+TGG 0.428469 8_1:-56388730 Msa1202730:CDS
TCTACCATGCTGTGGCCTGT+GGG 0.438800 8_1:+56384132 None:intergenic
TTAATTTATCTTCAAGCCAT+TGG 0.440048 8_1:-56384068 Msa1202730:three_prime_UTR
TTCAACCCCATGACCATACT+TGG 0.443016 8_1:+56386362 None:intergenic
GGTTATGAAGGAAAGTGGTT+GGG 0.444894 8_1:+56388698 None:intergenic
CTTTGAACAGATTAAAGTAA+AGG 0.451174 8_1:-56384603 Msa1202730:intron
GGATAATAAGCTGGTCCGTT+AGG 0.454230 8_1:+56386309 None:intergenic
CTTGTTCATAATCAATAAAG+TGG 0.455540 8_1:+56386563 None:intergenic
ACAGAGATGTGGCGTTGATT+CGG 0.456098 8_1:+56388672 None:intergenic
CGGTTATGAAGGAAAGTGGT+TGG 0.457398 8_1:+56388697 None:intergenic
TGAAATCCCCTATGTGTGTC+AGG 0.460264 8_1:-56385305 Msa1202730:intron
AGTTTCTTTGCAACTTCACC+AGG 0.463325 8_1:+56386525 None:intergenic
TCTTGTTAATGCTCTACAAC+AGG 0.463625 8_1:-56384335 Msa1202730:CDS
CATCGAGCAAACCCAAATTC+CGG 0.466144 8_1:+56388515 None:intergenic
TTCTACCATGCTGTGGCCTG+TGG 0.470669 8_1:+56384131 None:intergenic
TGGAGGGAGAGTGTTTGGTT+CGG 0.483158 8_1:+56388647 None:intergenic
AGCAAACCCAAATTCCGGTC+AGG 0.484000 8_1:+56388520 None:intergenic
TTCACATATAGTGGTGGTCA+TGG 0.484164 8_1:-56384222 Msa1202730:CDS
GGGTTGAAGATGTCAAGAAC+TGG 0.484499 8_1:-56386347 Msa1202730:CDS
TTTGGTTGAGAATGCTTTGG+AGG 0.498837 8_1:+56388630 None:intergenic
GTTATGAAGGAAAGTGGTTG+GGG 0.509349 8_1:+56388699 None:intergenic
TTTATTGATTATGAACAAGA+AGG 0.513200 8_1:-56386559 Msa1202730:CDS
GAGTGTTGAATTTGAAATGT+GGG 0.513216 8_1:+56388745 None:intergenic
TACTTGGTAAACCAAACGTT+GGG 0.515080 8_1:-56387515 Msa1202730:CDS
GAGTACACTGGCAAACCAAA+TGG 0.515192 8_1:-56387490 Msa1202730:CDS
TCTTTAGATTGATGAAGTGT+TGG 0.515468 8_1:-56386619 Msa1202730:intron
ATGACTACCTGACACACATA+GGG 0.516207 8_1:+56385298 None:intergenic
AAGTTGAAGGTGCACGAAGA+AGG 0.520325 8_1:+56388779 None:intergenic
CCCTCAGTGTGAAACCTGAC+CGG 0.521329 8_1:-56388534 Msa1202730:CDS
CCTTTGTTCTTGTAGAACAC+CGG 0.522067 8_1:+56386802 None:intergenic
GTTAGTGCCAAGTATGGTCA+TGG 0.523721 8_1:-56386369 Msa1202730:CDS
GATGTGGCGTTGATTCGGTT+CGG 0.525956 8_1:+56388677 None:intergenic
CACCAAACTGTCTCGAGTAT+GGG 0.533113 8_1:-56384293 Msa1202730:CDS
AATGACTACCTGACACACAT+AGG 0.533812 8_1:+56385297 None:intergenic
CATGCCTTTGGATAATAAGC+TGG 0.534355 8_1:+56386300 None:intergenic
TACCATGCTGTGGCCTGTGG+GGG 0.536600 8_1:+56384134 None:intergenic
CTTAAGCACTCTGGTTATGG+AGG 0.541168 8_1:-56384548 Msa1202730:CDS
AGTTAATGCTGATTGTGTGT+TGG 0.541523 8_1:-56386735 Msa1202730:CDS
CTACCATGCTGTGGCCTGTG+GGG 0.543898 8_1:+56384133 None:intergenic
TTTCACACTGAGGGATAAGA+AGG 0.551209 8_1:+56388543 None:intergenic
CTTTGTTCTTGTAGAACACC+GGG 0.555225 8_1:+56386803 None:intergenic
GAGGAACTCGGTTATGATTG+TGG 0.559857 8_1:-56388481 Msa1202730:CDS
GGTTCGGTTATGAAGGAAAG+TGG 0.560699 8_1:+56388693 None:intergenic
TTGTTCATAATCAATAAAGT+GGG 0.565630 8_1:+56386564 None:intergenic
GGAGGAAGAGTTGAAGTTGA+AGG 0.570351 8_1:+56388766 None:intergenic
GAAATTTACTGATGTTGATG+AGG 0.570559 8_1:-56386400 Msa1202730:CDS
CCGGTCAGGTTTCACACTGA+GGG 0.575716 8_1:+56388534 None:intergenic
ATGAAGGAAAGTGGTTGGGG+TGG 0.576260 8_1:+56388702 None:intergenic
AAGAAGGATCTTATCAAACC+TGG 0.576675 8_1:-56386543 Msa1202730:CDS
CACTGTATTCTACCATGCTG+TGG 0.576758 8_1:+56384124 None:intergenic
TTGGTTGAGAATGCTTTGGA+GGG 0.578280 8_1:+56388631 None:intergenic
GTTCATAATCAATAAAGTGG+GGG 0.579333 8_1:+56386566 None:intergenic
TTCATAATCAATAAAGTGGG+GGG 0.583791 8_1:+56386567 None:intergenic
TTAGTGCCAAGTATGGTCAT+GGG 0.584192 8_1:-56386368 Msa1202730:CDS
AGAGTGTTGAATTTGAAATG+TGG 0.584550 8_1:+56388744 None:intergenic
TTACTTGGTAAACCAAACGT+TGG 0.584750 8_1:-56387516 Msa1202730:CDS
CAACAATGGACATTTAAACA+AGG 0.589360 8_1:+56386255 None:intergenic
TTGGTTCGGCAACAGAGATG+TGG 0.596070 8_1:+56388661 None:intergenic
TGTTCATAATCAATAAAGTG+GGG 0.599446 8_1:+56386565 None:intergenic
ATGGTACTTTATGATACTCC+CGG 0.599677 8_1:-56386821 Msa1202730:CDS
AAAATTGGCGACAAGACGAA+GGG 0.603140 8_1:-56384574 Msa1202730:CDS
GAAGGGTTTCTTAAGCACTC+TGG 0.605070 8_1:-56384557 Msa1202730:CDS
ACACTGGCAAACCAAATGGT+TGG 0.605579 8_1:-56387486 Msa1202730:CDS
AAAATGTTATGCAGGATATG+TGG 0.608007 8_1:-56387541 Msa1202730:intron
GAAAATTGGCGACAAGACGA+AGG 0.608653 8_1:-56384575 Msa1202730:CDS
AAACAACAGAAGTGTAGTAG+TGG 0.621454 8_1:-56388817 Msa1202730:five_prime_UTR
GATTATGAAACTGAGGAACT+CGG 0.622855 8_1:-56388493 Msa1202730:CDS
TTGAAGGTGCACGAAGAAGG+AGG 0.628139 8_1:+56388782 None:intergenic
AACAATGGACATTTAAACAA+GGG 0.628587 8_1:+56386256 None:intergenic
CAGATAAACCTCAAACAACA+AGG 0.633560 8_1:-56387443 Msa1202730:CDS
CGGACCAGCTTATTATCCAA+AGG 0.636393 8_1:-56386304 Msa1202730:CDS
TCCGGTCAGGTTTCACACTG+AGG 0.638059 8_1:+56388533 None:intergenic
GGTTGGGGTGGTGAATCCAA+CGG 0.644037 8_1:+56388714 None:intergenic
GTGTTGGAAGAAGCCATAGG+AGG 0.646829 8_1:-56386603 Msa1202730:CDS
TGTGGTCCTAACCATAAAAG+CGG 0.647956 8_1:-56388463 Msa1202730:intron
TAGTGCCAAGTATGGTCATG+GGG 0.654939 8_1:-56386367 Msa1202730:CDS
ATACTCTCAAAGCTTCCTAA+CGG 0.655076 8_1:-56386324 Msa1202730:CDS
CCGGTGTTCTACAAGAACAA+AGG 0.666363 8_1:-56386802 Msa1202730:CDS
AAACGTTGGGAAGAGTACAC+TGG 0.667923 8_1:-56387502 Msa1202730:CDS
GCTCGATGATTATGAAACTG+AGG 0.671351 8_1:-56388500 Msa1202730:CDS
TGAAGTTGCAAAGAAACTTG+AGG 0.672367 8_1:-56386520 Msa1202730:intron
TGTTGAATTTGAAATGTGGG+AGG 0.678886 8_1:+56388748 None:intergenic
TGACTACCTGACACACATAG+GGG 0.686657 8_1:+56385299 None:intergenic
GAAGTGTTGGAAGAAGCCAT+AGG 0.698450 8_1:-56386606 Msa1202730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAAAGAAATTATG+AGG - chr8_1:56384643-56384662 Msa1202730:intron 10.0%
!!! TAATAAAACTCTTTGAAATA+TGG + chr8_1:56385771-56385790 None:intergenic 15.0%
!! TTCAATTGAAATATTGATAT+CGG + chr8_1:56385879-56385898 None:intergenic 15.0%
!! TTATATATAGAGATAAAAGA+AGG - chr8_1:56386737-56386756 Msa1202730:CDS 15.0%
!! AGAAAAATAAATGATTCTTT+CGG + chr8_1:56386776-56386795 None:intergenic 15.0%
!! ATTTATGAAACAGAAAAATA+TGG + chr8_1:56388267-56388286 None:intergenic 15.0%
!!! ATTAATTTTTTTGACAGCAT+CGG + chr8_1:56384083-56384102 None:intergenic 20.0%
!! AGTTTATTGATAAGTAAGTA+CGG - chr8_1:56384754-56384773 Msa1202730:CDS 20.0%
!!! GATGTAAATTGATTTATGTT+TGG - chr8_1:56384918-56384937 Msa1202730:intron 20.0%
!!! TATATCTCTGAAATCAATTT+TGG - chr8_1:56385091-56385110 Msa1202730:CDS 20.0%
!! TAAAATCAAACAGAAGAATA+TGG + chr8_1:56385587-56385606 None:intergenic 20.0%
!! TTATAACAATCAAATAGACT+CGG + chr8_1:56386002-56386021 None:intergenic 20.0%
!!! TATAATAGTTCTTTTTCATG+AGG - chr8_1:56386017-56386036 Msa1202730:intron 20.0%
!! TTGTTCATAATCAATAAAGT+GGG + chr8_1:56386386-56386405 None:intergenic 20.0%
!!! TTTATTGATTATGAACAAGA+AGG - chr8_1:56386388-56386407 Msa1202730:CDS 20.0%
!! TGTATAAAATCTTTAGCATT+TGG + chr8_1:56387887-56387906 None:intergenic 20.0%
!!! AAATGCTAAAGATTTTATAC+AGG - chr8_1:56387886-56387905 Msa1202730:intron 20.0%
!! AAGTAAAGGTTAAAGAAAAT+TGG - chr8_1:56388358-56388377 Msa1202730:intron 20.0%
!! TTGATCATTCATAATATGAT+AGG + chr8_1:56388507-56388526 None:intergenic 20.0%
!!! ATAAATCTTTTCACATATAG+TGG - chr8_1:56388716-56388735 Msa1202730:CDS 20.0%
! TTTCAAATTCATTCACACTA+CGG - chr8_1:56384524-56384543 Msa1202730:intron 25.0%
!! TTAAACAAGCTTCTTTTATG+CGG - chr8_1:56384547-56384566 Msa1202730:CDS 25.0%
!! AGAAATTATGAGGTACATTT+TGG - chr8_1:56384653-56384672 Msa1202730:intron 25.0%
! AAGCATTATAGTGTTTGATA+TGG - chr8_1:56384726-56384745 Msa1202730:intron 25.0%
!! GATTTTATGTAAAAGTGAGT+TGG - chr8_1:56384896-56384915 Msa1202730:intron 25.0%
!! GACTTTTACACTTGTATTTA+TGG + chr8_1:56384969-56384988 None:intergenic 25.0%
!! TCAAACAGAATCAATTTTGA+AGG - chr8_1:56385021-56385040 Msa1202730:CDS 25.0%
!! CAAACAGAATCAATTTTGAA+GGG - chr8_1:56385022-56385041 Msa1202730:CDS 25.0%
!!! AGAATTGATTTTGACATGTT+TGG + chr8_1:56385072-56385091 None:intergenic 25.0%
! CGGATCAAAAGTAAAAAATT+TGG + chr8_1:56385236-56385255 None:intergenic 25.0%
!!! ACTTTGCTCATGTTTTTTTA+TGG - chr8_1:56385289-56385308 Msa1202730:intron 25.0%
!!! CTTTGCTCATGTTTTTTTAT+GGG - chr8_1:56385290-56385309 Msa1202730:intron 25.0%
!!! TTTGCTCATGTTTTTTTATG+GGG - chr8_1:56385291-56385310 Msa1202730:intron 25.0%
!!! TCTGTTTTTATATGCATGAT+TGG - chr8_1:56385336-56385355 Msa1202730:CDS 25.0%
!!! CTGTTTTTATATGCATGATT+GGG - chr8_1:56385337-56385356 Msa1202730:CDS 25.0%
!!! TGTTTTTATATGCATGATTG+GGG - chr8_1:56385338-56385357 Msa1202730:CDS 25.0%
! CATAATAAGTAATGCAACAA+AGG + chr8_1:56385380-56385399 None:intergenic 25.0%
! ATCAGGTTTAATATTAAGTG+CGG - chr8_1:56385561-56385580 Msa1202730:intron 25.0%
! TTGAACATTGATATTACTCA+CGG + chr8_1:56385662-56385681 None:intergenic 25.0%
! TGTTCATAATCAATAAAGTG+GGG + chr8_1:56386385-56386404 None:intergenic 25.0%
! CTTGTTCATAATCAATAAAG+TGG + chr8_1:56386387-56386406 None:intergenic 25.0%
! GCATGTATAACTTAATAAAC+TGG - chr8_1:56386487-56386506 Msa1202730:intron 25.0%
! AACAATGGACATTTAAACAA+GGG + chr8_1:56386694-56386713 None:intergenic 25.0%
! TATACAAGTTTGATCAATGA+AGG + chr8_1:56387042-56387061 None:intergenic 25.0%
! TCGCAGAAAATTATCATTAT+TGG - chr8_1:56387932-56387951 Msa1202730:intron 25.0%
! TTACTTTACTTGTGAACTTA+TGG - chr8_1:56387988-56388007 Msa1202730:intron 25.0%
! CCAGAATCATAATAATATGT+TGG + chr8_1:56388042-56388061 None:intergenic 25.0%
! CCAACATATTATTATGATTC+TGG - chr8_1:56388039-56388058 Msa1202730:intron 25.0%
!!! TTGTTGTAGCATTAGTTTTA+AGG - chr8_1:56388064-56388083 Msa1202730:intron 25.0%
!! ACAAAAGAAAGTTTTTCTAG+AGG - chr8_1:56388214-56388233 Msa1202730:intron 25.0%
! ATCAAGGTTAAAGTGTAAAT+GGG + chr8_1:56388242-56388261 None:intergenic 25.0%
! AATTAATCAAGAGCTTCAAT+CGG - chr8_1:56388284-56388303 Msa1202730:intron 25.0%
! CTTTGAACAGATTAAAGTAA+AGG - chr8_1:56388344-56388363 Msa1202730:intron 25.0%
! TACATAATATGATACAAGAC+TGG + chr8_1:56388466-56388485 None:intergenic 25.0%
! TTAATTTATCTTCAAGCCAT+TGG - chr8_1:56388879-56388898 Msa1202730:five_prime_UTR 25.0%
!! GAGTGTTGAATTTGAAATGT+GGG + chr8_1:56384205-56384224 None:intergenic 30.0%
!! AGAGTGTTGAATTTGAAATG+TGG + chr8_1:56384206-56384225 None:intergenic 30.0%
AAGAAGAAAAAGCTCTTGTT+TGG + chr8_1:56384338-56384357 None:intergenic 30.0%
!! GAAAAAACAAACCGCTTTTA+TGG + chr8_1:56384498-56384517 None:intergenic 30.0%
TTGATAAGTAAGTACGGTTT+AGG - chr8_1:56384760-56384779 Msa1202730:CDS 30.0%
TGATAAGTAAGTACGGTTTA+GGG - chr8_1:56384761-56384780 Msa1202730:CDS 30.0%
!! GTATGTATGGTTTCACTTTT+GGG + chr8_1:56385121-56385140 None:intergenic 30.0%
! TGTATGTATGGTTTCACTTT+TGG + chr8_1:56385122-56385141 None:intergenic 30.0%
ATGAAAGCTTAGTGTATGTA+TGG + chr8_1:56385134-56385153 None:intergenic 30.0%
TGATATTTGATCACGGAATT+TGG + chr8_1:56385190-56385209 None:intergenic 30.0%
GAACACATGATATTTGATCA+CGG + chr8_1:56385197-56385216 None:intergenic 30.0%
!!! TTGCTCATGTTTTTTTATGG+GGG - chr8_1:56385292-56385311 Msa1202730:intron 30.0%
AAAATGTTATGCAGGATATG+TGG - chr8_1:56385406-56385425 Msa1202730:intron 30.0%
! CTGTAACTATTGACAACTTT+TGG + chr8_1:56385487-56385506 None:intergenic 30.0%
TAAAAAAAACTGCATCGCAT+TGG + chr8_1:56385819-56385838 None:intergenic 30.0%
CGGATCATTAATCTCTAAAT+GGG + chr8_1:56385859-56385878 None:intergenic 30.0%
TCGGATCATTAATCTCTAAA+TGG + chr8_1:56385860-56385879 None:intergenic 30.0%
AATGCTGTGCAGTAATATAA+TGG - chr8_1:56385899-56385918 Msa1202730:intron 30.0%
! TGCAGTAATATAATGGAATG+TGG - chr8_1:56385906-56385925 Msa1202730:intron 30.0%
AAATTCGTTAGTTCAACCAT+TGG - chr8_1:56385965-56385984 Msa1202730:intron 30.0%
AATTCGTTAGTTCAACCATT+GGG - chr8_1:56385966-56385985 Msa1202730:intron 30.0%
ATCTATGAATCTATTGCAGA+TGG - chr8_1:56386107-56386126 Msa1202730:intron 30.0%
!!! ACCAAAAACCATACTTTTTC+AGG + chr8_1:56386261-56386280 None:intergenic 30.0%
AAGAAAGCGATTCAGAAAAA+AGG + chr8_1:56386308-56386327 None:intergenic 30.0%
TCTTTAGATTGATGAAGTGT+TGG - chr8_1:56386328-56386347 Msa1202730:CDS 30.0%
TTCATAATCAATAAAGTGGG+GGG + chr8_1:56386383-56386402 None:intergenic 30.0%
GTTCATAATCAATAAAGTGG+GGG + chr8_1:56386384-56386403 None:intergenic 30.0%
GAAATTTACTGATGTTGATG+AGG - chr8_1:56386547-56386566 Msa1202730:CDS 30.0%
! TTTGACTTTAAACATGCCTT+TGG + chr8_1:56386662-56386681 None:intergenic 30.0%
CAACAATGGACATTTAAACA+AGG + chr8_1:56386695-56386714 None:intergenic 30.0%
ATTGTTCACGTTCATATATC+CGG + chr8_1:56386923-56386942 None:intergenic 30.0%
TACACAATCAGCAAATTAAC+TGG + chr8_1:56386989-56387008 None:intergenic 30.0%
TCACATATTTACATGCTCAA+AGG + chr8_1:56387154-56387173 None:intergenic 30.0%
AGCGTAACTAAGATATATTC+AGG + chr8_1:56387477-56387496 None:intergenic 30.0%
TGAATTCAGGAACAACATTA+AGG + chr8_1:56387542-56387561 None:intergenic 30.0%
GAAAGCTAGAAAGAAATTCA+AGG - chr8_1:56387742-56387761 Msa1202730:intron 30.0%
! TTCTTGTTTCCAATTATTCC+AGG - chr8_1:56387835-56387854 Msa1202730:intron 30.0%
TAACATTCACCTGGAATAAT+TGG + chr8_1:56387847-56387866 None:intergenic 30.0%
TATAGCTTATAACATTCACC+TGG + chr8_1:56387856-56387875 None:intergenic 30.0%
GGTGAATGTTATAAGCTATA+AGG - chr8_1:56387856-56387875 Msa1202730:intron 30.0%
! TGCTAAAGATTTTATACAGG+TGG - chr8_1:56387889-56387908 Msa1202730:intron 30.0%
! TTTTATACAGGTGGAGATTT+TGG - chr8_1:56387898-56387917 Msa1202730:intron 30.0%
CTGCTAAATGATATCAAACT+CGG + chr8_1:56388101-56388120 None:intergenic 30.0%
GATCAAGGTTAAAGTGTAAA+TGG + chr8_1:56388243-56388262 None:intergenic 30.0%
ACAGAAAAATATGGAGATCA+AGG + chr8_1:56388258-56388277 None:intergenic 30.0%
! AATCTTTTCACATATAGTGG+TGG - chr8_1:56388719-56388738 Msa1202730:CDS 30.0%
! AAACAACAGAAGTGTAGTAG+TGG - chr8_1:56384130-56384149 Msa1202730:three_prime_UTR 35.0%
! TGTTGAATTTGAAATGTGGG+AGG + chr8_1:56384202-56384221 None:intergenic 35.0%
TTGTTTGGTTGAGAATGCTT+TGG + chr8_1:56384323-56384342 None:intergenic 35.0%
GATTATGAAACTGAGGAACT+CGG - chr8_1:56384454-56384473 Msa1202730:intron 35.0%
!! AACAAACCGCTTTTATGGTT+AGG + chr8_1:56384493-56384512 None:intergenic 35.0%
GATAAGTAAGTACGGTTTAG+GGG - chr8_1:56384762-56384781 Msa1202730:CDS 35.0%
TTAGGGGTAATGTTGTAAAC+TGG - chr8_1:56384778-56384797 Msa1202730:CDS 35.0%
GTACGAAATGTTTGATTCTG+TGG - chr8_1:56384833-56384852 Msa1202730:intron 35.0%
GAAACCAAACATGTCAATGT+AGG - chr8_1:56385155-56385174 Msa1202730:intron 35.0%
GCTATATTAGAACAGCTACA+CGG + chr8_1:56385256-56385275 None:intergenic 35.0%
!!! TGCTCATGTTTTTTTATGGG+GGG - chr8_1:56385293-56385312 Msa1202730:intron 35.0%
TGTGTGTCAAAATGTTATGC+AGG - chr8_1:56385398-56385417 Msa1202730:intron 35.0%
TTACTTGGTAAACCAAACGT+TGG - chr8_1:56385431-56385450 Msa1202730:intron 35.0%
TACTTGGTAAACCAAACGTT+GGG - chr8_1:56385432-56385451 Msa1202730:intron 35.0%
CAGATAAACCTCAAACAACA+AGG - chr8_1:56385504-56385523 Msa1202730:intron 35.0%
CGAGTTCTTTGTATATGTTC+TGG - chr8_1:56385530-56385549 Msa1202730:intron 35.0%
TGATATTACTCACGGAATGA+AGG + chr8_1:56385654-56385673 None:intergenic 35.0%
! CTGGAAGATCACATCTATTT+TGG + chr8_1:56385729-56385748 None:intergenic 35.0%
AAAACAATGAACACGATGTC+TGG + chr8_1:56385748-56385767 None:intergenic 35.0%
TTGTACATGCATAGCAATGA+CGG + chr8_1:56386057-56386076 None:intergenic 35.0%
ATGGTACTTTATGATACTCC+CGG - chr8_1:56386126-56386145 Msa1202730:intron 35.0%
! AGTTAATGCTGATTGTGTGT+TGG - chr8_1:56386212-56386231 Msa1202730:intron 35.0%
!! GCCTGAAAAAGTATGGTTTT+TGG - chr8_1:56386257-56386276 Msa1202730:intron 35.0%
AAGAAGGATCTTATCAAACC+TGG - chr8_1:56386404-56386423 Msa1202730:CDS 35.0%
TGAAGTTGCAAAGAAACTTG+AGG - chr8_1:56386427-56386446 Msa1202730:intron 35.0%
ATACTCTCAAAGCTTCCTAA+CGG - chr8_1:56386623-56386642 Msa1202730:intron 35.0%
TGTCCATTGTTGCATTATCA+CGG - chr8_1:56386703-56386722 Msa1202730:CDS 35.0%
!! TGATTCTTTCGGTGTCTAAT+GGG + chr8_1:56386765-56386784 None:intergenic 35.0%
!! ATGATTCTTTCGGTGTCTAA+TGG + chr8_1:56386766-56386785 None:intergenic 35.0%
CTCAATAAAGTATAGCAGAC+CGG - chr8_1:56386901-56386920 Msa1202730:intron 35.0%
GAGATGCATCAATGTTATTG+TGG - chr8_1:56387198-56387217 Msa1202730:intron 35.0%
ATCAATGTTATTGTGGAGAC+TGG - chr8_1:56387205-56387224 Msa1202730:intron 35.0%
ACATTCACAAATCACGATAC+AGG + chr8_1:56387262-56387281 None:intergenic 35.0%
TATTTCCTGTACTGTCAAAC+TGG - chr8_1:56387284-56387303 Msa1202730:intron 35.0%
AATGTTGTTCCTGAATTCAC+AGG - chr8_1:56387543-56387562 Msa1202730:intron 35.0%
TCAGCGACAAAAAATCTTTC+TGG + chr8_1:56387586-56387605 None:intergenic 35.0%
!! TGAACTTATGGTATTGACTG+CGG - chr8_1:56388000-56388019 Msa1202730:intron 35.0%
ATTGAGCACAACATACATGT+AGG + chr8_1:56388127-56388146 None:intergenic 35.0%
ATGTTGTGCTCAATTACTTC+AGG - chr8_1:56388133-56388152 Msa1202730:intron 35.0%
TTTCTTAAGCACTCTGGTTA+TGG - chr8_1:56388396-56388415 Msa1202730:intron 35.0%
GATCAAAACACAGACTGAAA+CGG - chr8_1:56388521-56388540 Msa1202730:CDS 35.0%
TCTTGTTAATGCTCTACAAC+AGG - chr8_1:56388612-56388631 Msa1202730:CDS 35.0%
GTTATGAAGGAAAGTGGTTG+GGG + chr8_1:56384251-56384270 None:intergenic 40.0%
GGTTATGAAGGAAAGTGGTT+GGG + chr8_1:56384252-56384271 None:intergenic 40.0%
!! TTGATTCGGTTCGGTTATGA+AGG + chr8_1:56384264-56384283 None:intergenic 40.0%
! TTGGTTGAGAATGCTTTGGA+GGG + chr8_1:56384319-56384338 None:intergenic 40.0%
TTTGGTTGAGAATGCTTTGG+AGG + chr8_1:56384320-56384339 None:intergenic 40.0%
TTTCACACTGAGGGATAAGA+AGG + chr8_1:56384407-56384426 None:intergenic 40.0%
GCTCGATGATTATGAAACTG+AGG - chr8_1:56384447-56384466 Msa1202730:intron 40.0%
TGTGGTCCTAACCATAAAAG+CGG - chr8_1:56384484-56384503 Msa1202730:intron 40.0%
! AACAAGCTTCTTTTATGCGG+TGG - chr8_1:56384550-56384569 Msa1202730:CDS 40.0%
TTGACATGTTTGGTTGCTCT+CGG + chr8_1:56385062-56385081 None:intergenic 40.0%
TGTGCCTACATTGACATGTT+TGG + chr8_1:56385162-56385181 None:intergenic 40.0%
CATGTCAATGTAGGCACAAT+TGG - chr8_1:56385164-56385183 Msa1202730:intron 40.0%
!!! GCTCATGTTTTTTTATGGGG+GGG - chr8_1:56385294-56385313 Msa1202730:intron 40.0%
!!! GTTTTTTTATGGGGGGGATT+TGG - chr8_1:56385300-56385319 Msa1202730:intron 40.0%
! ACAACTTTTGGCCAACCATT+TGG + chr8_1:56385475-56385494 None:intergenic 40.0%
!! ATGTTCTGGCTCAGATTATC+AGG - chr8_1:56385544-56385563 Msa1202730:intron 40.0%
TAGTTCAACCATTGGGTTCT+AGG - chr8_1:56385973-56385992 Msa1202730:intron 40.0%
TGTACATGCATAGCAATGAC+GGG + chr8_1:56386056-56386075 None:intergenic 40.0%
CTTTGTTCTTGTAGAACACC+GGG + chr8_1:56386147-56386166 None:intergenic 40.0%
CCTTTGTTCTTGTAGAACAC+CGG + chr8_1:56386148-56386167 None:intergenic 40.0%
! GTAAAGCGCCTGAAAAAGTA+TGG - chr8_1:56386250-56386269 Msa1202730:intron 40.0%
TTTATCTTTGTGGCCTCCTA+TGG + chr8_1:56386360-56386379 None:intergenic 40.0%
AGTTTCTTTGCAACTTCACC+AGG + chr8_1:56386425-56386444 None:intergenic 40.0%
GTTGCAAAGAAACTTGAGGT+TGG - chr8_1:56386431-56386450 Msa1202730:intron 40.0%
! GATTTTTCCTGTGTTTGCAG+TGG - chr8_1:56386519-56386538 Msa1202730:intron 40.0%
ATTCCAGTTAGTGCCAAGTA+TGG - chr8_1:56386572-56386591 Msa1202730:CDS 40.0%
TTAGTGCCAAGTATGGTCAT+GGG - chr8_1:56386579-56386598 Msa1202730:CDS 40.0%
CATGCCTTTGGATAATAAGC+TGG + chr8_1:56386650-56386669 None:intergenic 40.0%
! AGACCGTGATAATGCAACAA+TGG + chr8_1:56386709-56386728 None:intergenic 40.0%
!! TAAGCACAAGGGTATTAGCA+AGG + chr8_1:56386873-56386892 None:intergenic 40.0%
TGCTAATACCCTTGTGCTTA+TGG - chr8_1:56386873-56386892 Msa1202730:intron 40.0%
CGGTCTGCTATACTTTATTG+AGG + chr8_1:56386903-56386922 None:intergenic 40.0%
TGATGCATCTCTATGTCGTT+AGG + chr8_1:56387189-56387208 None:intergenic 40.0%
! CTTTTCCAGTTTGACAGTAC+AGG + chr8_1:56387292-56387311 None:intergenic 40.0%
! TAATGTACGCTGTCACTTGA+AGG + chr8_1:56387319-56387338 None:intergenic 40.0%
GCATGTTATAGTGATAGCTG+TGG + chr8_1:56387427-56387446 None:intergenic 40.0%
TCACAGTATCCTGTGAATTC+AGG + chr8_1:56387555-56387574 None:intergenic 40.0%
ATGACTACCTGACACACATA+GGG + chr8_1:56387652-56387671 None:intergenic 40.0%
AATGACTACCTGACACACAT+AGG + chr8_1:56387653-56387672 None:intergenic 40.0%
! GCTTTCCTAAACCTTTTGCA+GGG + chr8_1:56387728-56387747 None:intergenic 40.0%
! AGCTTTCCTAAACCTTTTGC+AGG + chr8_1:56387729-56387748 None:intergenic 40.0%
!! GAACTTATGGTATTGACTGC+GGG - chr8_1:56388001-56388020 Msa1202730:intron 40.0%
TGTGCTCAATTACTTCAGGA+AGG - chr8_1:56388137-56388156 Msa1202730:intron 40.0%
AAAATTGGCGACAAGACGAA+GGG - chr8_1:56388373-56388392 Msa1202730:intron 40.0%
TCTGGTTATGGAGGTCAAAT+AGG - chr8_1:56388408-56388427 Msa1202730:intron 40.0%
! TAGGTACTGTATGATGAGCA+CGG - chr8_1:56388427-56388446 Msa1202730:intron 40.0%
!! ACACAGACTGAAACGGATTT+TGG - chr8_1:56388528-56388547 Msa1202730:CDS 40.0%
TTCACATATAGTGGTGGTCA+TGG - chr8_1:56388725-56388744 Msa1202730:CDS 40.0%
! AAGTTGAAGGTGCACGAAGA+AGG + chr8_1:56384171-56384190 None:intergenic 45.0%
GGAGGAAGAGTTGAAGTTGA+AGG + chr8_1:56384184-56384203 None:intergenic 45.0%
CGGTTATGAAGGAAAGTGGT+TGG + chr8_1:56384253-56384272 None:intergenic 45.0%
! GGTTCGGTTATGAAGGAAAG+TGG + chr8_1:56384257-56384276 None:intergenic 45.0%
!! ACAGAGATGTGGCGTTGATT+CGG + chr8_1:56384278-56384297 None:intergenic 45.0%
TGTGAAACCTGACCGGAATT+TGG - chr8_1:56384420-56384439 Msa1202730:intron 45.0%
GTGAAACCTGACCGGAATTT+GGG - chr8_1:56384421-56384440 Msa1202730:intron 45.0%
CATCGAGCAAACCCAAATTC+CGG + chr8_1:56384435-56384454 None:intergenic 45.0%
GAGGAACTCGGTTATGATTG+TGG - chr8_1:56384466-56384485 Msa1202730:intron 45.0%
TGACATGTTTGGTTGCTCTC+GGG + chr8_1:56385061-56385080 None:intergenic 45.0%
! GCAGGATATGTGGCTTTACT+TGG - chr8_1:56385416-56385435 Msa1202730:intron 45.0%
AGTGTACTCTTCCCAACGTT+TGG + chr8_1:56385446-56385465 None:intergenic 45.0%
! AAACGTTGGGAAGAGTACAC+TGG - chr8_1:56385445-56385464 Msa1202730:intron 45.0%
GAGTACACTGGCAAACCAAA+TGG - chr8_1:56385457-56385476 Msa1202730:intron 45.0%
ACACTGGCAAACCAAATGGT+TGG - chr8_1:56385461-56385480 Msa1202730:intron 45.0%
!! ACTCGATGCCTTGTTGTTTG+AGG + chr8_1:56385515-56385534 None:intergenic 45.0%
! AATGAAGGCACGAAATCGAG+AGG + chr8_1:56385639-56385658 None:intergenic 45.0%
CCGGTGTTCTACAAGAACAA+AGG - chr8_1:56386145-56386164 Msa1202730:intron 45.0%
!! GAAGTGTTGGAAGAAGCCAT+AGG - chr8_1:56386341-56386360 Msa1202730:CDS 45.0%
AAGTGGGGGGTTTATCTTTG+TGG + chr8_1:56386370-56386389 None:intergenic 45.0%
TCGTATACCACTGCAAACAC+AGG + chr8_1:56386529-56386548 None:intergenic 45.0%
TGACCATACTTGGCACTAAC+TGG + chr8_1:56386578-56386597 None:intergenic 45.0%
GTTAGTGCCAAGTATGGTCA+TGG - chr8_1:56386578-56386597 Msa1202730:CDS 45.0%
TAGTGCCAAGTATGGTCATG+GGG - chr8_1:56386580-56386599 Msa1202730:CDS 45.0%
TTCAACCCCATGACCATACT+TGG + chr8_1:56386588-56386607 None:intergenic 45.0%
GGGTTGAAGATGTCAAGAAC+TGG - chr8_1:56386600-56386619 Msa1202730:CDS 45.0%
GGATAATAAGCTGGTCCGTT+AGG + chr8_1:56386641-56386660 None:intergenic 45.0%
CGGACCAGCTTATTATCCAA+AGG - chr8_1:56386643-56386662 Msa1202730:intron 45.0%
GAGGTTCACCATAAGCACAA+GGG + chr8_1:56386884-56386903 None:intergenic 45.0%
TGAGGTTCACCATAAGCACA+AGG + chr8_1:56386885-56386904 None:intergenic 45.0%
TGCATCTCTATGTCGTTAGG+TGG + chr8_1:56387186-56387205 None:intergenic 45.0%
TGAAATCCCCTATGTGTGTC+AGG - chr8_1:56387642-56387661 Msa1202730:intron 45.0%
TGACTACCTGACACACATAG+GGG + chr8_1:56387651-56387670 None:intergenic 45.0%
! TCCTAAACCTTTTGCAGGGT+GGG + chr8_1:56387724-56387743 None:intergenic 45.0%
! TTCCTAAACCTTTTGCAGGG+TGG + chr8_1:56387725-56387744 None:intergenic 45.0%
AAGAGCTTCAATCGGTACTG+TGG - chr8_1:56388292-56388311 Msa1202730:intron 45.0%
!! AACACCAGTGTTGATGACGA+TGG + chr8_1:56388320-56388339 None:intergenic 45.0%
GAAAATTGGCGACAAGACGA+AGG - chr8_1:56388372-56388391 Msa1202730:intron 45.0%
GAAGGGTTTCTTAAGCACTC+TGG - chr8_1:56388390-56388409 Msa1202730:intron 45.0%
CTTAAGCACTCTGGTTATGG+AGG - chr8_1:56388399-56388418 Msa1202730:intron 45.0%
!! CAGACTGAAACGGATTTTGG+TGG - chr8_1:56388531-56388550 Msa1202730:CDS 45.0%
GATCATTGCACATACCTGCA+AGG + chr8_1:56388576-56388595 None:intergenic 45.0%
ACACCAAACTGTCTCGAGTA+TGG - chr8_1:56388653-56388672 Msa1202730:CDS 45.0%
CACCAAACTGTCTCGAGTAT+GGG - chr8_1:56388654-56388673 Msa1202730:CDS 45.0%
AACCCATACTCGAGACAGTT+TGG + chr8_1:56388659-56388678 None:intergenic 45.0%
TAAAATGCTTTAGCCCCCAC+AGG - chr8_1:56388800-56388819 Msa1202730:exon 45.0%
CACTGTATTCTACCATGCTG+TGG + chr8_1:56388826-56388845 None:intergenic 45.0%
! TTGAAGGTGCACGAAGAAGG+AGG + chr8_1:56384168-56384187 None:intergenic 50.0%
CAACACTCTTTCTTCGCCGT+TGG - chr8_1:56384217-56384236 Msa1202730:CDS 50.0%
ATGAAGGAAAGTGGTTGGGG+TGG + chr8_1:56384248-56384267 None:intergenic 50.0%
!! GATGTGGCGTTGATTCGGTT+CGG + chr8_1:56384273-56384292 None:intergenic 50.0%
!! TTGGTTCGGCAACAGAGATG+TGG + chr8_1:56384289-56384308 None:intergenic 50.0%
!! TGGAGGGAGAGTGTTTGGTT+CGG + chr8_1:56384303-56384322 None:intergenic 50.0%
!! TGCTTTGGAGGGAGAGTGTT+TGG + chr8_1:56384308-56384327 None:intergenic 50.0%
AGCAAACCCAAATTCCGGTC+AGG + chr8_1:56384430-56384449 None:intergenic 50.0%
! GGGGGGGATTTGGAATTCAA+AGG - chr8_1:56385310-56385329 Msa1202730:CDS 50.0%
CTCGGTTACCTAGAACCCAA+TGG + chr8_1:56385984-56386003 None:intergenic 50.0%
GTGTTGGAAGAAGCCATAGG+AGG - chr8_1:56386344-56386363 Msa1202730:CDS 50.0%
! CCTAAACCTTTTGCAGGGTG+GGG + chr8_1:56387723-56387742 None:intergenic 50.0%
GGTACCATCGTCATCAACAC+TGG - chr8_1:56388313-56388332 Msa1202730:intron 50.0%
ACTGTATGATGAGCACGGTG+AGG - chr8_1:56388432-56388451 Msa1202730:intron 50.0%
CTGTATGATGAGCACGGTGA+GGG - chr8_1:56388433-56388452 Msa1202730:intron 50.0%
CATACCTGCAAGGAGAGGAA+GGG + chr8_1:56388566-56388585 None:intergenic 50.0%
ACATACCTGCAAGGAGAGGA+AGG + chr8_1:56388567-56388586 None:intergenic 50.0%
TTGCACATACCTGCAAGGAG+AGG + chr8_1:56388571-56388590 None:intergenic 50.0%
GGTTGGGGTGGTGAATCCAA+CGG + chr8_1:56384236-56384255 None:intergenic 55.0%
CCGGTCAGGTTTCACACTGA+GGG + chr8_1:56384416-56384435 None:intergenic 55.0%
CCCTCAGTGTGAAACCTGAC+CGG - chr8_1:56384413-56384432 Msa1202730:intron 55.0%
TCCGGTCAGGTTTCACACTG+AGG + chr8_1:56384417-56384436 None:intergenic 55.0%
CCCCACCCTGCAAAAGGTTT+AGG - chr8_1:56387720-56387739 Msa1202730:intron 55.0%
TCTACCATGCTGTGGCCTGT+GGG + chr8_1:56388818-56388837 None:intergenic 55.0%
TTCTACCATGCTGTGGCCTG+TGG + chr8_1:56388819-56388838 None:intergenic 55.0%
GCACGAAATCGAGAGGCGAG+GGG + chr8_1:56385632-56385651 None:intergenic 60.0%
GGCACGAAATCGAGAGGCGA+GGG + chr8_1:56385633-56385652 None:intergenic 60.0%
AGGCACGAAATCGAGAGGCG+AGG + chr8_1:56385634-56385653 None:intergenic 60.0%
! CTTTTGCAGGGTGGGGAGTC+GGG + chr8_1:56387716-56387735 None:intergenic 60.0%
! CCTTTTGCAGGGTGGGGAGT+CGG + chr8_1:56387717-56387736 None:intergenic 60.0%
GACACCCTTCCTCTCCTTGC+AGG - chr8_1:56388559-56388578 Msa1202730:CDS 60.0%
TACCATGCTGTGGCCTGTGG+GGG + chr8_1:56388816-56388835 None:intergenic 60.0%
CTACCATGCTGTGGCCTGTG+GGG + chr8_1:56388817-56388836 None:intergenic 60.0%
CCGACTCCCCACCCTGCAAA+AGG - chr8_1:56387714-56387733 Msa1202730:intron 65.0%
CAGGGTGGGGAGTCGGGAAG+TGG + chr8_1:56387710-56387729 None:intergenic 70.0%
AGCCCCCACAGGCCACAGCA+TGG - chr8_1:56388811-56388830 Msa1202730:exon 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 56384066 56388903 56384066 ID=Msa1202730;Name=Msa1202730
chr8_1 mRNA 56384066 56388903 56384066 ID=Msa1202730-mRNA-1;Parent=Msa1202730;Name=Msa1202730-mRNA-1;_AED=0.08;_eAED=0.08;_QI=91|0.77|0.8|1|1|1|10|146|484
chr8_1 exon 56384066 56384388 56384066 ID=Msa1202730-mRNA-1:exon:18332;Parent=Msa1202730-mRNA-1
chr8_1 exon 56384535 56384615 56384535 ID=Msa1202730-mRNA-1:exon:18331;Parent=Msa1202730-mRNA-1
chr8_1 exon 56384734 56384814 56384734 ID=Msa1202730-mRNA-1:exon:18330;Parent=Msa1202730-mRNA-1
chr8_1 exon 56385011 56385112 56385011 ID=Msa1202730-mRNA-1:exon:18329;Parent=Msa1202730-mRNA-1
chr8_1 exon 56385306 56385404 56385306 ID=Msa1202730-mRNA-1:exon:18328;Parent=Msa1202730-mRNA-1
chr8_1 exon 56386266 56386430 56386266 ID=Msa1202730-mRNA-1:exon:18327;Parent=Msa1202730-mRNA-1
chr8_1 exon 56386521 56386634 56386521 ID=Msa1202730-mRNA-1:exon:18326;Parent=Msa1202730-mRNA-1
chr8_1 exon 56386703 56386843 56386703 ID=Msa1202730-mRNA-1:exon:18325;Parent=Msa1202730-mRNA-1
chr8_1 exon 56387404 56387549 56387404 ID=Msa1202730-mRNA-1:exon:18324;Parent=Msa1202730-mRNA-1
chr8_1 exon 56388464 56388903 56388464 ID=Msa1202730-mRNA-1:exon:18323;Parent=Msa1202730-mRNA-1
chr8_1 five_prime_UTR 56388813 56388903 56388813 ID=Msa1202730-mRNA-1:five_prime_utr;Parent=Msa1202730-mRNA-1
chr8_1 CDS 56388464 56388812 56388464 ID=Msa1202730-mRNA-1:cds;Parent=Msa1202730-mRNA-1
chr8_1 CDS 56387404 56387549 56387404 ID=Msa1202730-mRNA-1:cds;Parent=Msa1202730-mRNA-1
chr8_1 CDS 56386703 56386843 56386703 ID=Msa1202730-mRNA-1:cds;Parent=Msa1202730-mRNA-1
chr8_1 CDS 56386521 56386634 56386521 ID=Msa1202730-mRNA-1:cds;Parent=Msa1202730-mRNA-1
chr8_1 CDS 56386266 56386430 56386266 ID=Msa1202730-mRNA-1:cds;Parent=Msa1202730-mRNA-1
chr8_1 CDS 56385306 56385404 56385306 ID=Msa1202730-mRNA-1:cds;Parent=Msa1202730-mRNA-1
chr8_1 CDS 56385011 56385112 56385011 ID=Msa1202730-mRNA-1:cds;Parent=Msa1202730-mRNA-1
chr8_1 CDS 56384734 56384814 56384734 ID=Msa1202730-mRNA-1:cds;Parent=Msa1202730-mRNA-1
chr8_1 CDS 56384535 56384615 56384535 ID=Msa1202730-mRNA-1:cds;Parent=Msa1202730-mRNA-1
chr8_1 CDS 56384212 56384388 56384212 ID=Msa1202730-mRNA-1:cds;Parent=Msa1202730-mRNA-1
chr8_1 three_prime_UTR 56384066 56384211 56384066 ID=Msa1202730-mRNA-1:three_prime_utr;Parent=Msa1202730-mRNA-1
Gene Sequence

>Msa1202730

ATGAAGAACCTCCTTCTTCGTGCACCTTCAACTTCAACTCTTCCTCCCACATTTCAAATTCAACACTCTTTCTTCGCCGTTGGATTCACCACCCCAACCACTTTCCTTCATAACCGAACCGAATCAACGCCACATCTCTGTTGCCGAACCAAACACTCTCCCTCCAAAGCATTCTCAACCAAACAAGAGCTTTTTCTTCTTCAACAAGAATTAGATGAAGATGATGAAGAAATAGACGATGACACTTCCTTCTTATCCCTCAGTGTGAAACCTGACCGGAATTTGGGTTTGCTCGATGATTATGAAACTGAGGAACTCGGTTATGATTGTGGTCCTAACCATAAAAGCGGATATGTGGCTTTACTTGGTAAACCAAACGTTGGGAAGAGTACACTGGCAAACCAAATGGTTGGCCAAAAGTTGTCAATAGTTACAGATAAACCTCAAACAACAAGGCATCGAGTTCTTTGTATATGTTCTGGCTCAGATTATCAGATGGTACTTTATGATACTCCCGGTGTTCTACAAGAACAAAGGCACAAGTTAGACTCAATGATGATGCAAAATGTTCGCAGCGCTACAGTTAATGCTGATTGTGTGTTGGTTCTCGTAGATGCATGTAAAGCGCCTGAAAAAATTGATGAAGTGTTGGAAGAAGCCATAGGAGGCCACAAAGATAAACCCCCCACTTTATTGATTATGAACAAGAAGGATCTTATCAAACCTGGTGAAGTTGCAAAGAAACTTGAGTGGTATACGAAATTTACTGATGTTGATGAGGTTATTCCAGTTAGTGCCAAGTATGGTCATGGGGTTGAAGATGTCAAGAACTGGATACTCTCAAAGCTTCCTAACGGACCAGCTTATTATCCAAAGGCATGTTTAAAGTCAAAATTTTGTTTCCCTTGTTTAAATGATACTGTGAGTGAGCATCCAGAAAGATTTTTTGTCGCTGAAATTGTTAGAGAGAAGATATTTTTGCAATATCGAAATGAAATCCCCTATGTGTGTCAGGTGAATGTTATAAGCTATAAGGCTCGACCAAATGCTAAAGATTTTATACAGGTGGAGATTTTGGTTGAGAGAAACTCGCAGAAAATTATCATTATTGGAAAAGAAGGAAAAACTTTAAAACTGCTTGCAACAGCTGCGCGTCTTGACGTTGAAGATTTTCTACAAAAGAAAGTTTTTCTAGAGATTAAAGTAAAGGTTAAAGAAAATTGGCGACAAGACGAAGGGTTTCTTAAGCACTCTGGTTATGGAGGTCAAATAGGTACTGTATGTGCAATGATCAATTTTGTTAAACAAATCTTGTTAATGCTCTACAACAGGAGTGAAGATCGTATTCGAACACCAAACTGTCTCGAGTATGGGTTGATATCACATTATGATTCAAAATGTTCAAACGAGTTCATAAATCTTTTCACATATAGTGGTGGTCATGGATTCATTTGA

Protein sequence

>Msa1202730

MKNLLLRAPSTSTLPPTFQIQHSFFAVGFTTPTTFLHNRTESTPHLCCRTKHSPSKAFSTKQELFLLQQELDEDDEEIDDDTSFLSLSVKPDRNLGLLDDYETEELGYDCGPNHKSGYVALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRVLCICSGSDYQMVLYDTPGVLQEQRHKLDSMMMQNVRSATVNADCVLVLVDACKAPEKIDEVLEEAIGGHKDKPPTLLIMNKKDLIKPGEVAKKLEWYTKFTDVDEVIPVSAKYGHGVEDVKNWILSKLPNGPAYYPKACLKSKFCFPCLNDTVSEHPERFFVAEIVREKIFLQYRNEIPYVCQVNVISYKARPNAKDFIQVEILVERNSQKIIIIGKEGKTLKLLATAARLDVEDFLQKKVFLEIKVKVKENWRQDEGFLKHSGYGGQIGTVCAMINFVKQILLMLYNRSEDRIRTPNCLEYGLISHYDSKCSNEFINLFTYSGGHGFI*