AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0865390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0865390 MtrunA17_Chr1g0211661 79.162 811 122 7 3 771 60 865 0.0 1245
Msa0865390 MtrunA17_Chr1g0211711 67.779 779 215 7 88 836 284 1056 0.0 1074
Msa0865390 MtrunA17_Chr1g0183311 59.410 882 287 9 22 836 10 887 0.0 1011
Msa0865390 MtrunA17_Chr5g0426961 66.760 716 209 5 140 833 129 837 0.0 976
Msa0865390 MtrunA17_Chr5g0448301 81.710 503 91 1 240 741 129 631 0.0 845
Msa0865390 MtrunA17_Chr5g0448301 71.930 171 45 1 1 168 18 188 4.06e-62 223
Msa0865390 MtrunA17_Chr1g0211691 67.541 610 163 8 145 719 336 945 0.0 818
Msa0865390 MtrunA17_Chr5g0420361 60.620 645 203 11 215 812 139 779 0.0 761
Msa0865390 MtrunA17_Chr6g0472441 56.109 663 205 12 215 824 81 710 0.0 711
Msa0865390 MtrunA17_Chr2g0289121 45.157 702 325 11 150 828 155 819 0.0 574
Msa0865390 MtrunA17_Chr4g0075261 42.760 739 320 14 151 828 168 864 0.0 573
Msa0865390 MtrunA17_Chr7g0275771 42.200 609 294 13 98 659 77 674 1.60e-143 452
Msa0865390 MtrunA17_Chr7g0275771 61.486 148 57 0 681 828 777 924 2.41e-54 205
Msa0865390 MtrunA17_Chr1g0192011 35.695 734 402 15 140 829 254 961 1.92e-141 448
Msa0865390 MtrunA17_Chr2g0289031 52.284 394 178 3 437 828 8 393 2.58e-131 402
Msa0865390 MtrunA17_Chr1g0147021 46.589 513 256 10 148 655 867 1366 3.25e-127 424
Msa0865390 MtrunA17_Chr1g0147021 52.332 193 86 2 684 876 1551 1737 8.50e-53 202
Msa0865390 MtrunA17_Chr2g0281051 32.715 755 422 13 151 827 207 953 1.25e-117 384
Msa0865390 MtrunA17_Chr4g0048531 35.559 599 280 15 317 829 699 1277 6.18e-99 339
Msa0865390 MtrunA17_Chr4g0048531 34.659 176 103 4 151 316 260 433 7.66e-24 108
Msa0865390 MtrunA17_Chr8g0364421 49.180 244 97 3 261 496 5 229 2.00e-66 223
Msa0865390 MtrunA17_Chr5g0448291 70.000 170 38 3 835 997 32 195 1.87e-61 208
Msa0865390 MtrunA17_Chr1g0211701 70.588 136 40 0 717 852 4 139 9.05e-59 198
Msa0865390 MtrunA17_Chr7g0231061 56.593 182 74 2 498 676 12 191 3.13e-58 199
Msa0865390 MtrunA17_Chr5g0448311 63.590 195 31 3 835 993 23 213 1.43e-55 191
Msa0865390 MtrunA17_Chr8g0361381 50.811 185 87 1 435 619 28 208 7.62e-54 186
Msa0865390 MtrunA17_Chr2g0289091 67.568 111 36 0 683 793 310 420 1.88e-45 169
Msa0865390 MtrunA17_Chr2g0289091 54.930 142 63 1 511 652 23 163 8.73e-42 159
Msa0865390 MtrunA17_Chr8g0361391 69.318 88 26 1 684 771 51 137 8.65e-37 136
Msa0865390 MtrunA17_Chr2g0289041 38.462 208 105 5 173 362 2 204 8.71e-36 135
Msa0865390 MtrunA17_Chr8g0364411 56.250 112 49 0 151 262 33 144 1.57e-35 132
Msa0865390 MtrunA17_Chr8g0340381 67.857 84 23 2 532 615 36 115 1.86e-30 119
Msa0865390 MtrunA17_Chr1g0211671 83.871 62 10 0 770 831 15 76 8.66e-29 112
Msa0865390 MtrunA17_Chr5g0448321 46.341 164 70 6 835 995 29 177 1.05e-26 108
Msa0865390 MtrunA17_Chr2g0289101 32.283 127 66 3 280 388 5 129 1.51e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0865390 AT1G11950.1 47.361 701 321 11 151 828 193 868 0.0 621
Msa0865390 AT1G11950.3 47.361 701 321 11 151 828 193 868 0.0 621
Msa0865390 AT1G62310.1 47.315 689 327 9 151 817 209 883 0.0 613
Msa0865390 AT1G11950.2 45.426 634 298 11 151 761 193 801 1.81e-173 526
Msa0865390 AT3G07610.1 54.125 497 205 4 343 832 415 895 3.44e-172 530
Msa0865390 AT3G07610.1 33.224 304 184 5 44 330 32 333 3.22e-44 174
Msa0865390 AT3G07610.3 52.132 516 208 5 343 832 415 917 6.57e-165 512
Msa0865390 AT3G07610.3 33.224 304 184 5 44 330 32 333 3.03e-44 174
Msa0865390 AT4G00990.3 44.553 514 258 11 150 647 79 581 5.32e-128 407
Msa0865390 AT4G00990.3 55.856 111 45 1 667 777 672 778 5.29e-31 131
Msa0865390 AT4G00990.2 44.553 514 258 11 150 647 79 581 9.41e-128 406
Msa0865390 AT4G00990.2 59.223 103 38 1 667 769 672 770 1.19e-30 130
Msa0865390 AT4G00990.1 44.553 514 258 11 150 647 79 581 1.53e-127 407
Msa0865390 AT4G00990.1 58.642 162 63 1 667 828 672 829 2.49e-53 201
Msa0865390 AT1G09060.2 32.617 745 426 19 127 829 181 891 9.34e-117 381
Msa0865390 AT1G09060.1 32.617 745 426 19 127 829 181 891 9.34e-117 381
Msa0865390 AT1G09060.4 32.617 745 426 19 127 829 195 905 2.29e-116 380
Msa0865390 AT1G09060.3 32.617 745 426 19 127 829 195 905 2.29e-116 380
Msa0865390 AT4G21430.1 29.184 723 438 13 146 827 222 911 5.15e-94 319
Msa0865390 AT3G07610.2 54.480 279 122 1 343 621 415 688 3.09e-89 302
Msa0865390 AT3G07610.2 33.224 304 184 5 44 330 32 333 1.34e-44 174

Find 207 sgRNAs with CRISPR-Local

Find 429 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATTCCTCTGAACTTAATT+TGG 0.160479 5_4:-66006641 None:intergenic
GCCTCCTTCTGATTTATTTC+AGG 0.172247 5_4:+66008726 Msa0865390:CDS
GGACTTGTGGAACCTCATTT+TGG 0.208763 5_4:-66006603 None:intergenic
ACATCACTCTCATTCAATTT+AGG 0.211861 5_4:-66006911 None:intergenic
CTTTATATATTCCTTCAATT+TGG 0.229259 5_4:-66009598 None:intergenic
GATACATACTCGATCTTAAT+TGG 0.230110 5_4:-66007575 None:intergenic
ACCCCTTAGAAGGTGCTATC+TGG 0.241380 5_4:+66009550 Msa0865390:CDS
TGACATTCATTATCGGCTTT+TGG 0.263135 5_4:-66007677 None:intergenic
AGCACCTTGAGCAAGATAAA+AGG 0.269490 5_4:+66009445 Msa0865390:CDS
GGATTTGTATATTCTTTATA+AGG 0.271748 5_4:-66008790 None:intergenic
AGTACATTGCTGACAATTAC+AGG 0.278275 5_4:-66007989 None:intergenic
TTCTAAATACGATGAAGTTT+TGG 0.278404 5_4:+66008078 Msa0865390:CDS
ATCCCAGATAGCACCTTCTA+AGG 0.283008 5_4:-66009553 None:intergenic
CTCCGTGGTGGGAAGCTTCT+AGG 0.287089 5_4:+66007542 Msa0865390:CDS
CCCTTACCATTTGTTCAAAC+AGG 0.304071 5_4:-66006746 None:intergenic
TTGCACAAGGAATGGCTTAA+AGG 0.313837 5_4:-66012930 None:intergenic
AATGCACGCCACATGACTTT+TGG 0.316385 5_4:-66008040 None:intergenic
ACTAACTCGGAGATGCAATT+TGG 0.333429 5_4:-66007734 None:intergenic
CTCGACTTCCTCATCATTGT+TGG 0.339463 5_4:-66007114 None:intergenic
CAACCTTGCTGTGAAGTTGC+CGG 0.339593 5_4:+66008828 Msa0865390:CDS
AAAAGGGAGCTAGTTGGTTA+TGG 0.357001 5_4:+66009462 Msa0865390:CDS
AACTTCATCGTATTTAGAAT+TGG 0.357620 5_4:-66008074 None:intergenic
ATGCTCCATAGTCAGATAAA+TGG 0.360391 5_4:-66009916 None:intergenic
TATGGATTTGCTCATGATCT+TGG 0.362682 5_4:+66008895 Msa0865390:CDS
GTTGAATAACGGTGAAAATT+CGG 0.370609 5_4:+66006249 Msa0865390:CDS
GCATACCCTGTTTGAACAAA+TGG 0.372456 5_4:+66006740 Msa0865390:CDS
ATAACATCGGCGTTACTAAC+AGG 0.373933 5_4:-66007839 None:intergenic
TCATACCATTTATCTGACTA+TGG 0.374732 5_4:+66009911 Msa0865390:CDS
GTCGCAAGGATTGGCGCAAT+TGG 0.374765 5_4:+66008677 Msa0865390:CDS
AAAGGGAGCTAGTTGGTTAT+GGG 0.379755 5_4:+66009463 Msa0865390:CDS
TTTGTCTCTCCTGAAAATAT+TGG 0.381247 5_4:+66010557 Msa0865390:CDS
AATCGTGAGTGGTCAAGATC+TGG 0.383517 5_4:+66007620 Msa0865390:CDS
TAGAGGAGACTTGTGATAAT+AGG 0.385192 5_4:+66007801 Msa0865390:CDS
AGAAGAAGGAAATGCTCTTA+TGG 0.386847 5_4:+66013291 Msa0865390:CDS
TTGGCGGATCTGTGATTTAT+CGG 0.388855 5_4:-66010617 None:intergenic
CTCCATAGCAGCTTTAACTA+AGG 0.392298 5_4:-66006404 None:intergenic
GTTGGAGGGGACCCCTTAGA+AGG 0.401130 5_4:+66009540 Msa0865390:CDS
AGAAAAGAGTTTGATGATAG+TGG 0.404713 5_4:+66013204 Msa0865390:CDS
ATGAAACTTAAGGAGGAGTA+TGG 0.411899 5_4:+66009942 Msa0865390:CDS
TTCAATGGCACTGGAGCAAA+GGG 0.413215 5_4:+66007963 Msa0865390:CDS
GAAGTATCCTTCTCATTTCA+AGG 0.417000 5_4:-66007709 None:intergenic
GGAGCATAAGATGAAACTTA+AGG 0.419575 5_4:+66009932 Msa0865390:CDS
AATGTACTTGAATGTACATC+TGG 0.421952 5_4:+66008004 Msa0865390:CDS
TTCCTTAGTTAAAGCTGCTA+TGG 0.423479 5_4:+66006402 Msa0865390:CDS
CTCCCGCGTTTCTTTCTCTC+CGG 0.425830 5_4:-66006553 None:intergenic
ACAGATTTCTATACTGTCCT+AGG 0.426836 5_4:+66007906 Msa0865390:CDS
AGGTTGAGAGAACCACTAAA+AGG 0.429360 5_4:-66008811 None:intergenic
CAAGAATGATATTGCAAAGA+AGG 0.432147 5_4:-66012994 None:intergenic
ACCATGATGACATTCATTAT+CGG 0.447505 5_4:-66007684 None:intergenic
AATGTACATCTGGTTTAAGC+TGG 0.447849 5_4:+66008014 Msa0865390:CDS
AGGCTCTTCATCATTTCAAC+CGG 0.452508 5_4:+66006534 Msa0865390:CDS
TTCAACGACGCAGTTTCAGC+AGG 0.452822 5_4:-66006232 None:intergenic
TAAATGGTATGATCATGAAT+GGG 0.458309 5_4:-66009900 None:intergenic
TCTTCCACATTTAAGACGGT+TGG 0.461419 5_4:+66007163 Msa0865390:CDS
AATATCCACCAATTCTTCAC+TGG 0.461911 5_4:+66008643 Msa0865390:CDS
ATAAGGAATACCTTGTCTCT+TGG 0.463609 5_4:-66007219 None:intergenic
GTTGTTAGTGAGCAGAATAA+AGG 0.465943 5_4:+66006489 Msa0865390:CDS
TTACCTTCAGATTTCTGACT+TGG 0.467821 5_4:-66010133 None:intergenic
ATTACGTTATGACCACCATT+TGG 0.470404 5_4:-66013148 None:intergenic
CTAAAGATGAGCGTGTGATC+TGG 0.471996 5_4:+66007352 Msa0865390:CDS
GCACCTTGAGCAAGATAAAA+GGG 0.472017 5_4:+66009446 Msa0865390:CDS
ACACAAGGGGTCGCAAGGAT+TGG 0.472118 5_4:+66008668 Msa0865390:CDS
TCTTTCAATTTCAACACCTC+AGG 0.472947 5_4:-66008700 None:intergenic
CAATGTAAAAGAAGTGATAC+AGG 0.475307 5_4:+66006676 Msa0865390:CDS
CCCCTTAGAAGGTGCTATCT+GGG 0.478828 5_4:+66009551 Msa0865390:CDS
TTAATGACAGTAATTTCCTC+AGG 0.479065 5_4:-66009408 None:intergenic
CGGAAGATGAAATGGTAGCT+AGG 0.480642 5_4:+66006374 Msa0865390:CDS
TCATGAGTGGTTGATGAAGA+GGG 0.481340 5_4:-66013049 None:intergenic
TTAAGTTTCTTGTGGACTTG+TGG 0.481350 5_4:-66006616 None:intergenic
ATTTGGTATTAAGTTTCTTG+TGG 0.482774 5_4:-66006624 None:intergenic
CAACAGCGACTCCACCGTAT+TGG 0.485762 5_4:-66006350 None:intergenic
ATAAATGGTATGATCATGAA+TGG 0.486755 5_4:-66009901 None:intergenic
GACCTCAAACTTGTCCTTGG+CGG 0.487327 5_4:-66010633 None:intergenic
TACGGTGGAGTCGCTGTTGA+CGG 0.488256 5_4:+66006354 Msa0865390:CDS
CTGATATGTAAAATTCGAAC+CGG 0.494707 5_4:-66013108 None:intergenic
GCTGTTGACGGAAGATGAAA+TGG 0.495716 5_4:+66006366 Msa0865390:CDS
TTGTGTAACCAGTGAAGAAT+TGG 0.496636 5_4:-66008651 None:intergenic
TTGCTCATGATCTTGGACGT+GGG 0.502037 5_4:+66008902 Msa0865390:CDS
ATTTGGTTACATCCTCTCTC+CGG 0.503256 5_4:-66009581 None:intergenic
TCCCAGATAGCACCTTCTAA+GGG 0.503286 5_4:-66009552 None:intergenic
ACTATAGGAAATGAAGCATA+AGG 0.507232 5_4:+66007085 Msa0865390:intron
AGGTGTTGAAATTGAAAGAT+TGG 0.508050 5_4:+66008704 Msa0865390:CDS
TCAGGCTTTAAACAATAATC+CGG 0.508635 5_4:-66008847 None:intergenic
TGGCTATAAGGTAAATGTGT+TGG 0.509638 5_4:+66009359 Msa0865390:intron
AGATCTGGGTGGCATGCAAA+TGG 0.510153 5_4:+66007635 Msa0865390:CDS
CTAGAGAATTGCACAAGGAA+TGG 0.511607 5_4:-66012938 None:intergenic
GAGAAAGAGAAAAGCGGAGA+AGG 0.511730 5_4:+66006573 Msa0865390:CDS
GATAGTGACTTGGTGGTTGG+AGG 0.512169 5_4:+66009525 Msa0865390:CDS
AGAGGATGTAACCAAATTGA+AGG 0.514954 5_4:+66009587 Msa0865390:CDS
TTTCAATGGCACTGGAGCAA+AGG 0.515097 5_4:+66007962 Msa0865390:CDS
GACTTGCAGGAATTGAACCT+TGG 0.517043 5_4:+66010057 Msa0865390:intron
AGGCTGTTAATTGCATAGAT+TGG 0.519223 5_4:+66008107 Msa0865390:CDS
TGTATATTCTTTATAAGGCA+AGG 0.521531 5_4:-66008785 None:intergenic
AAATGGTGGTCATAACGTAA+TGG 0.527010 5_4:+66013150 Msa0865390:CDS
TATGAATCTTGGTGCCAATA+CGG 0.529389 5_4:+66006336 Msa0865390:CDS
TGAAGAACAAATGATTGAGA+AGG 0.530667 5_4:+66007187 Msa0865390:CDS
ATCTGTGATTTATCGGAAGC+CGG 0.530939 5_4:-66010610 None:intergenic
GGTGAAAATTCGGTTGAAGC+TGG 0.533484 5_4:+66006259 Msa0865390:CDS
GTAAAAGAAGTGATACAGGC+AGG 0.535898 5_4:+66006680 Msa0865390:CDS
ACAGCACACAGGACATGCTT+CGG 0.536929 5_4:-66006936 None:intergenic
CCTTACCATTTGTTCAAACA+GGG 0.538038 5_4:-66006745 None:intergenic
ATCCGCCAAGGACAAGTTTG+AGG 0.538260 5_4:+66010631 Msa0865390:CDS
ACAGACCTCAAACTTGTCCT+TGG 0.538417 5_4:-66010636 None:intergenic
TTGAAATGATGAAGAGCCTC+CGG 0.538715 5_4:-66006530 None:intergenic
GCTAGTTGGTTATGGGGAGG+CGG 0.540172 5_4:+66009470 Msa0865390:CDS
ATCGTGAGTGGTCAAGATCT+GGG 0.541397 5_4:+66007621 Msa0865390:CDS
GCCGATAATGAATGTCATCA+TGG 0.542022 5_4:+66007683 Msa0865390:CDS
GAACATGTAACTCTTGTCAA+TGG 0.544454 5_4:-66012972 None:intergenic
AACAGATTCTTCTGCTACTG+CGG 0.546201 5_4:-66006293 None:intergenic
ATGGTTTCCTTGAAATGAGA+AGG 0.547108 5_4:+66007702 Msa0865390:CDS
ACTTGGTGAGGCAAGCCAGC+GGG 0.547254 5_4:-66010116 None:intergenic
TCATCCAACCGTCTTAAATG+TGG 0.550657 5_4:-66007167 None:intergenic
GGAAGATGAAATGGTAGCTA+GGG 0.553295 5_4:+66006375 Msa0865390:CDS
TTTGCTCATGATCTTGGACG+TGG 0.556810 5_4:+66008901 Msa0865390:CDS
GAAAATGTCTTAAATCTCCA+TGG 0.559521 5_4:-66007943 None:intergenic
GAAACTGCGTCGTTGAATAA+CGG 0.560168 5_4:+66006238 Msa0865390:CDS
TGTTGTTGCGAGCTCCGTGG+TGG 0.562600 5_4:+66007530 Msa0865390:CDS
AACTCGGAGATGCAATTTGG+AGG 0.562849 5_4:-66007731 None:intergenic
TCAGAGATCACAGAACCAAA+TGG 0.564516 5_4:+66013133 Msa0865390:CDS
TTCAGATTTCTGACTTGGTG+AGG 0.565040 5_4:-66010128 None:intergenic
GTTGTTGCGAGCTCCGTGGT+GGG 0.565282 5_4:+66007531 Msa0865390:CDS
GACTTCTTCCACATTTAAGA+CGG 0.566290 5_4:+66007159 Msa0865390:CDS
ATGTACATCTGGTTTAAGCT+GGG 0.567172 5_4:+66008015 Msa0865390:CDS
TATTGTTTAAAGCCTGACAT+GGG 0.567740 5_4:+66008853 Msa0865390:CDS
TGGTGTAGATCTACAGCCCT+AGG 0.571725 5_4:-66007923 None:intergenic
GAAGAAAGAGATGTGGTAGC+CGG 0.572033 5_4:+66006511 Msa0865390:CDS
TTCTTCACTGGTTACACAAG+GGG 0.572201 5_4:+66008655 Msa0865390:CDS
TCATCTTTAGAATGATCCCC+CGG 0.573641 5_4:-66007339 None:intergenic
TTCTCTAAGTATATGCTGAA+AGG 0.574255 5_4:+66007137 Msa0865390:CDS
CACTAATGATAGTGACTTGG+TGG 0.574412 5_4:+66009518 Msa0865390:CDS
CAAGATAAAAGGGAGCTAGT+TGG 0.574795 5_4:+66009456 Msa0865390:CDS
TTTACATTGATGGCACGCTA+AGG 0.575795 5_4:-66006662 None:intergenic
TTATTGTTTAAAGCCTGACA+TGG 0.576650 5_4:+66008852 Msa0865390:CDS
AAATTGCAGTCCTTTAAAGC+AGG 0.577294 5_4:+66009647 Msa0865390:CDS
TGCTCATGATCTTGGACGTG+GGG 0.579297 5_4:+66008903 Msa0865390:CDS
CGTTCCTGAAATAAATCAGA+AGG 0.580684 5_4:-66008730 None:intergenic
TGTAACCAGTGAAGAATTGG+TGG 0.581894 5_4:-66008648 None:intergenic
TGTGTTATTGTGTATAACAT+CGG 0.582130 5_4:-66007852 None:intergenic
TGGTTACACAAGGGGTCGCA+AGG 0.582867 5_4:+66008663 Msa0865390:CDS
GTTGGCGCATATCGCTAAAG+TGG 0.586598 5_4:+66009377 Msa0865390:CDS
GAAGGAATCCACCCAAAATG+AGG 0.587016 5_4:+66006591 Msa0865390:CDS
AGAAATTCAGAAGAGGAAGA+TGG 0.587534 5_4:+66006456 Msa0865390:CDS
GTTTGCTTTACATACTAACT+CGG 0.595572 5_4:-66007747 None:intergenic
AATTAAGCTTCAAGATGTAG+AGG 0.596112 5_4:+66007784 Msa0865390:CDS
TAATACCAAATTAAGTTCAG+AGG 0.597446 5_4:+66006636 Msa0865390:CDS
AATGATAGTGACTTGGTGGT+TGG 0.597880 5_4:+66009522 Msa0865390:CDS
ATAGTGACTTGGTGGTTGGA+GGG 0.599154 5_4:+66009526 Msa0865390:CDS
GAAAGAGAAGCCAAGAGACA+AGG 0.600316 5_4:+66007209 Msa0865390:CDS
TTCATGAGTGGTTGATGAAG+AGG 0.600666 5_4:-66013050 None:intergenic
CACCTAGAAGCTTCCCACCA+CGG 0.601702 5_4:-66007544 None:intergenic
AGCTTCTGAATAAAAGTCCA+AGG 0.609535 5_4:-66010074 None:intergenic
TCAACGACGCAGTTTCAGCA+GGG 0.610163 5_4:-66006231 None:intergenic
AATAAAGGAAGAAAGAGATG+TGG 0.610511 5_4:+66006504 Msa0865390:CDS
TCGACAGTGAGAAGAGTGAC+CGG 0.617579 5_4:+66013089 Msa0865390:CDS
CAGATTTCTATACTGTCCTA+GGG 0.617894 5_4:+66007907 Msa0865390:CDS
CGCAACAACAGAGGAGACAA+AGG 0.621015 5_4:-66007517 None:intergenic
AACCGGAGAGAAAGAAACGC+GGG 0.621363 5_4:+66006551 Msa0865390:CDS
AATTCTTCACTGGTTACACA+AGG 0.621883 5_4:+66008653 Msa0865390:CDS
TAAAAGAAGTGATACAGGCA+GGG 0.623394 5_4:+66006681 Msa0865390:CDS
TAGTGACTTGGTGGTTGGAG+GGG 0.631450 5_4:+66009527 Msa0865390:CDS
CACGGAGCTCGCAACAACAG+AGG 0.634726 5_4:-66007526 None:intergenic
CATCATCAAACACATTACAA+TGG 0.637797 5_4:-66008942 None:intergenic
ACGAGTCTACGAATCGTGAG+TGG 0.638120 5_4:+66007609 Msa0865390:CDS
TCACCAAGTCAGAAATCTGA+AGG 0.640211 5_4:+66010130 Msa0865390:CDS
TGACACTAATGATAGTGACT+TGG 0.641602 5_4:+66009515 Msa0865390:CDS
AGAATTAAACAAGAAATGTG+AGG 0.644539 5_4:+66013336 Msa0865390:CDS
GGTCGAAACCAACAATGATG+AGG 0.644580 5_4:+66007106 Msa0865390:CDS
TTCGGTTGAAGCTGGTGATG+TGG 0.646757 5_4:+66006267 Msa0865390:CDS
CTCTGTTGTTGCGAGCTCCG+TGG 0.650643 5_4:+66007527 Msa0865390:CDS
TCCTGAAATAAATCAGAAGG+AGG 0.651303 5_4:-66008727 None:intergenic
GGGTGGCATGCAAATGGCGA+TGG 0.651622 5_4:+66007641 Msa0865390:CDS
GACTTGGTGAGGCAAGCCAG+CGG 0.651967 5_4:-66010117 None:intergenic
ATTGTTTAAAGCCTGACATG+GGG 0.653779 5_4:+66008854 Msa0865390:CDS
CGTGGTGGGAAGCTTCTAGG+TGG 0.655278 5_4:+66007545 Msa0865390:CDS
AAGGGAGCTAGTTGGTTATG+GGG 0.655659 5_4:+66009464 Msa0865390:CDS
GGTCACTCTTCTCACTGTCG+AGG 0.659355 5_4:-66013087 None:intergenic
GATAGTGGAACCAGAAAATG+TGG 0.659948 5_4:+66013219 Msa0865390:CDS
CCCAGATAGCACCTTCTAAG+GGG 0.660498 5_4:-66009551 None:intergenic
GAATCTTGGTGCCAATACGG+TGG 0.660922 5_4:+66006339 Msa0865390:CDS
GAAAGAGATGTGGTAGCCGG+AGG 0.665710 5_4:+66006514 Msa0865390:CDS
AATCCGGCAACTTCACAGCA+AGG 0.666731 5_4:-66008831 None:intergenic
ATTCTTCACTGGTTACACAA+GGG 0.667170 5_4:+66008654 Msa0865390:CDS
ACGCGGGAGAAAGAGAAAAG+CGG 0.667642 5_4:+66006567 Msa0865390:CDS
GATAAATCACAGATCCGCCA+AGG 0.668186 5_4:+66010619 Msa0865390:CDS
GTTTGACAGAGGAATTCCGC+CGG 0.671961 5_4:+66010591 Msa0865390:CDS
GCATAAGATGAAACTTAAGG+AGG 0.673984 5_4:+66009935 Msa0865390:CDS
GGATTGGCGCAATTGGCCTG+AGG 0.678244 5_4:+66008684 Msa0865390:CDS
GCTGGGAACCAAAAGTCATG+TGG 0.680165 5_4:+66008032 Msa0865390:CDS
GGAGCTAGTTGGTTATGGGG+AGG 0.683456 5_4:+66009467 Msa0865390:CDS
AAATGGTATGATCATGAATG+GGG 0.688068 5_4:-66009899 None:intergenic
GAGATCACAGAACCAAATGG+TGG 0.691285 5_4:+66013136 Msa0865390:CDS
CGAGTATGTATCACAGACTG+AGG 0.691844 5_4:+66007586 Msa0865390:CDS
TAAAGTGGAACTGAAACCTG+AGG 0.692071 5_4:+66009392 Msa0865390:CDS
TGAGTGCTTGCGTTTGACAG+AGG 0.693789 5_4:+66010580 Msa0865390:CDS
AGAGGAGACAAAGGTCAAAG+CGG 0.698562 5_4:-66007508 None:intergenic
ATGAACTCAGCATGATGACG+AGG 0.699370 5_4:-66008757 None:intergenic
TATACACAATAACACAACGA+AGG 0.705122 5_4:+66007859 Msa0865390:CDS
CAACCGGAGAGAAAGAAACG+CGG 0.707826 5_4:+66006550 Msa0865390:CDS
TTGCAATTATCACAGCACAC+AGG 0.707899 5_4:-66006947 None:intergenic
TGTGATTTATCGGAAGCCGG+CGG 0.708974 5_4:-66010607 None:intergenic
AGCTGCTAGAGAATTGCACA+AGG 0.715213 5_4:-66012943 None:intergenic
TAATTGCATAGATTGGTGTG+AGG 0.719281 5_4:+66008114 Msa0865390:CDS
TTACAGGTCTGAGAAAACCA+AGG 0.720333 5_4:+66011260 Msa0865390:intron
AGGGCTGTAGATCTACACCA+TGG 0.725512 5_4:+66007926 Msa0865390:CDS
GCTATGGAGATAATGAAACG+CGG 0.761604 5_4:+66006418 Msa0865390:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 5_4:+66007964 Msa0865390:CDS
GTGAGTGGTCAAGATCTGGG+TGG 0.775298 5_4:+66007624 Msa0865390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATTTTAAAATTTGATATT+CGG + chr5_4:66007274-66007293 Msa0865390:intron 10.0%
!!! TGATATTAACTATGTTTTTT+TGG + chr5_4:66006869-66006888 Msa0865390:intron 15.0%
!! ATTTCTAAATTTATGATGAA+GGG + chr5_4:66008145-66008164 Msa0865390:intron 15.0%
!!! TGTAATCTTATCTTTTAAAT+TGG + chr5_4:66008412-66008431 Msa0865390:intron 15.0%
!!! ATAATAACAGTAAAATCTTT+TGG - chr5_4:66009044-66009063 None:intergenic 15.0%
!!! TAATTTCATAATTTGATTTG+TGG + chr5_4:66009219-66009238 Msa0865390:intron 15.0%
!! ATGAAAATAACTAAGTAATA+TGG + chr5_4:66010728-66010747 Msa0865390:intron 15.0%
!!! AATATTTTAGTTTATCTCAT+AGG - chr5_4:66010792-66010811 None:intergenic 15.0%
!! AGTAAATATAGAAATAGAAA+TGG - chr5_4:66012033-66012052 None:intergenic 15.0%
!!! TATTAGGTTAAATATGTTTT+TGG + chr5_4:66012308-66012327 Msa0865390:intron 15.0%
!! ATTTCATTAAGAAAATACAA+AGG - chr5_4:66012429-66012448 None:intergenic 15.0%
!!! TTTTAATAGGACATTATTAA+AGG - chr5_4:66012468-66012487 None:intergenic 15.0%
!!! ATGAGTATTTAACTTTTAAT+AGG - chr5_4:66012481-66012500 None:intergenic 15.0%
!!! ATTTTTTAGGTAGTTATATA+CGG - chr5_4:66012637-66012656 None:intergenic 15.0%
!! ATATATATATTTATGGTGAA+AGG - chr5_4:66012781-66012800 None:intergenic 15.0%
!!! ATTTAGAATTGGTTTTTTGA+CGG - chr5_4:66008066-66008085 None:intergenic 20.0%
!! GATTTCTAAATTTATGATGA+AGG + chr5_4:66008144-66008163 Msa0865390:intron 20.0%
!! TTTCTAAATTTATGATGAAG+GGG + chr5_4:66008146-66008165 Msa0865390:intron 20.0%
!! CCAATTACACTAAAAAAAAT+TGG - chr5_4:66008295-66008314 None:intergenic 20.0%
!!! CCAATTTTTTTTAGTGTAAT+TGG + chr5_4:66008292-66008311 Msa0865390:intron 20.0%
!! GGATTTGTATATTCTTTATA+AGG - chr5_4:66008793-66008812 None:intergenic 20.0%
!! GAAAAACTCAAATAATTAAG+AGG - chr5_4:66009003-66009022 None:intergenic 20.0%
!!! TTAAAAAGTGCATAATTTGT+AGG + chr5_4:66009079-66009098 Msa0865390:intron 20.0%
!! ATAAACTGCAAAGTATATTT+AGG + chr5_4:66009292-66009311 Msa0865390:intron 20.0%
!! CTTTATATATTCCTTCAATT+TGG - chr5_4:66009601-66009620 None:intergenic 20.0%
!!! TTTTCTATTATCTAGCTTTA+TGG + chr5_4:66009688-66009707 Msa0865390:intron 20.0%
!! AAATGATTTGATCATTCAAA+TGG + chr5_4:66010006-66010025 Msa0865390:intron 20.0%
!!! CTAAATTTTAGTAGATTGTT+TGG + chr5_4:66010305-66010324 Msa0865390:intron 20.0%
!!! TAATAATTTGCAACTTTTCA+AGG + chr5_4:66010332-66010351 Msa0865390:intron 20.0%
!!! TTCTGCTTTTTCTATTTATT+AGG + chr5_4:66010681-66010700 Msa0865390:intron 20.0%
!! TTGAAAAATTAGAGAAAGAA+AGG + chr5_4:66011069-66011088 Msa0865390:CDS 20.0%
!! ATGATTGTGATTAAATTTAC+AGG + chr5_4:66011244-66011263 Msa0865390:intron 20.0%
!!! GTTCCATATTTTGTTTTAAA+TGG + chr5_4:66011380-66011399 Msa0865390:intron 20.0%
!! AACCTAAAAACAAAATGTAA+AGG + chr5_4:66011941-66011960 Msa0865390:intron 20.0%
!!! ATCCTTTACATTTTGTTTTT+AGG - chr5_4:66011946-66011965 None:intergenic 20.0%
!!! ATTAAGCCATTTATTTTAAG+AGG + chr5_4:66012271-66012290 Msa0865390:intron 20.0%
!!! TTAAGCCATTTATTTTAAGA+GGG + chr5_4:66012272-66012291 Msa0865390:intron 20.0%
!!! TTTTTTAGGTAGTTATATAC+GGG - chr5_4:66012636-66012655 None:intergenic 20.0%
!! TGCTGCTATATATATATTTA+TGG - chr5_4:66012788-66012807 None:intergenic 20.0%
! ATTTGGTATTAAGTTTCTTG+TGG - chr5_4:66006627-66006646 None:intergenic 25.0%
! TAATACCAAATTAAGTTCAG+AGG + chr5_4:66006636-66006655 Msa0865390:CDS 25.0%
!! TATCACTTCTTTTACATTGA+TGG - chr5_4:66006675-66006694 None:intergenic 25.0%
!!! TAACTTGTTTCATATTGTGT+CGG + chr5_4:66006797-66006816 Msa0865390:intron 25.0%
! TATTGCAAAGATTACATGTT+TGG + chr5_4:66006827-66006846 Msa0865390:intron 25.0%
!! TCTTTTAAACTCATCAATGT+CGG + chr5_4:66006989-66007008 Msa0865390:intron 25.0%
! ATAATTGAAATGAATCCATC+TGG + chr5_4:66007059-66007078 Msa0865390:intron 25.0%
!! AAAAATGATTGCTGACTATA+AGG - chr5_4:66007239-66007258 None:intergenic 25.0%
! CTCAAAGCTAAAAATAAAAC+CGG + chr5_4:66007320-66007339 Msa0865390:CDS 25.0%
! TCAAAGCTAAAAATAAAACC+GGG + chr5_4:66007321-66007340 Msa0865390:CDS 25.0%
!! TGTGTTATTGTGTATAACAT+CGG - chr5_4:66007855-66007874 None:intergenic 25.0%
!!! GAGATTTAAGACATTTTCAA+TGG + chr5_4:66007948-66007967 Msa0865390:CDS 25.0%
!! AACTTCATCGTATTTAGAAT+TGG - chr5_4:66008077-66008096 None:intergenic 25.0%
!! TTCTAAATACGATGAAGTTT+TGG + chr5_4:66008078-66008097 Msa0865390:CDS 25.0%
!!! AATCTAAATTTTAAGAACGC+TGG - chr5_4:66008230-66008249 None:intergenic 25.0%
! GACTATCAAGTAAACAAATT+GGG - chr5_4:66008462-66008481 None:intergenic 25.0%
! TGACTATCAAGTAAACAAAT+TGG - chr5_4:66008463-66008482 None:intergenic 25.0%
! GCAAATTTGGATAAATAATC+AGG - chr5_4:66008492-66008511 None:intergenic 25.0%
! TAGAATAGACTATCAAGTAA+AGG - chr5_4:66008567-66008586 None:intergenic 25.0%
!! TTACTTGATAGTCTATTCTA+TGG + chr5_4:66008567-66008586 Msa0865390:intron 25.0%
! TGTATATTCTTTATAAGGCA+AGG - chr5_4:66008788-66008807 None:intergenic 25.0%
!! GAATATACAAATCCTTTTAG+TGG + chr5_4:66008799-66008818 Msa0865390:CDS 25.0%
!! CCATAAGCAATATATGTTTT+TGG - chr5_4:66008880-66008899 None:intergenic 25.0%
! CCAAAAACATATATTGCTTA+TGG + chr5_4:66008877-66008896 Msa0865390:CDS 25.0%
! AAATGAACAGATAAATGCAT+TGG - chr5_4:66009129-66009148 None:intergenic 25.0%
!!! TAATTTGATTTGTGGTGTTT+TGG + chr5_4:66009227-66009246 Msa0865390:intron 25.0%
! CAAATTACAAAGAATTGATC+AGG - chr5_4:66009341-66009360 None:intergenic 25.0%
! CTGATCAATTCTTTGTAATT+TGG + chr5_4:66009339-66009358 Msa0865390:intron 25.0%
! TTCTTTGTAATTTGGCTATA+AGG + chr5_4:66009347-66009366 Msa0865390:intron 25.0%
! TTCAAATATACATGCAACAA+AGG + chr5_4:66009786-66009805 Msa0865390:intron 25.0%
! AACTATTATTCATTACAAGC+TGG - chr5_4:66009825-66009844 None:intergenic 25.0%
! TAAATGGTATGATCATGAAT+GGG - chr5_4:66009903-66009922 None:intergenic 25.0%
! ATAAATGGTATGATCATGAA+TGG - chr5_4:66009904-66009923 None:intergenic 25.0%
! TTTAACTCAACAAACAACAA+AGG - chr5_4:66009989-66010008 None:intergenic 25.0%
! GTAATAAAATGTCAACAGAT+TGG - chr5_4:66010034-66010053 None:intergenic 25.0%
!!! ATTTTATTACATTGACTTGC+AGG + chr5_4:66010044-66010063 Msa0865390:intron 25.0%
! CAAAAAATATATACGCTTCT+TGG - chr5_4:66010190-66010209 None:intergenic 25.0%
!!! GAAGCGTATATATTTTTTGT+TGG + chr5_4:66010191-66010210 Msa0865390:intron 25.0%
!!! ATATATTTTTTGTTGGAGCA+AGG + chr5_4:66010198-66010217 Msa0865390:intron 25.0%
! TTCAAGGCTAAATTTGAATT+TGG + chr5_4:66010348-66010367 Msa0865390:intron 25.0%
! AACAATTTGCAAGAAATCAT+AGG - chr5_4:66010408-66010427 None:intergenic 25.0%
!!! CATAGGATTAGTTTCTTATT+TGG - chr5_4:66010775-66010794 None:intergenic 25.0%
! TTTCATATATTCTCACATAC+CGG + chr5_4:66010843-66010862 Msa0865390:intron 25.0%
! AAGATTTCATACATTCAACA+AGG - chr5_4:66010900-66010919 None:intergenic 25.0%
!! ATGTGTCAAGAATTTCTTTT+TGG + chr5_4:66010964-66010983 Msa0865390:intron 25.0%
!! TGTGTCAAGAATTTCTTTTT+GGG + chr5_4:66010965-66010984 Msa0865390:intron 25.0%
!! ATGATTAGATTTGGTAATCT+TGG + chr5_4:66011330-66011349 Msa0865390:intron 25.0%
!! TGATTAGATTTGGTAATCTT+GGG + chr5_4:66011331-66011350 Msa0865390:intron 25.0%
! TTCTATACAACAAAACAGAA+AGG + chr5_4:66011358-66011377 Msa0865390:intron 25.0%
!! GCACCATTTAAAACAAAATA+TGG - chr5_4:66011386-66011405 None:intergenic 25.0%
!!! TCCCAATGTTTTTTTTTTTG+AGG + chr5_4:66011734-66011753 Msa0865390:intron 25.0%
! CCCTCAAAAAAAAAAACATT+GGG - chr5_4:66011738-66011757 None:intergenic 25.0%
!!! CCCAATGTTTTTTTTTTTGA+GGG + chr5_4:66011735-66011754 Msa0865390:intron 25.0%
! TCCCTCAAAAAAAAAAACAT+TGG - chr5_4:66011739-66011758 None:intergenic 25.0%
! TGGACTCAAAAAATAGTTAA+TGG - chr5_4:66012013-66012032 None:intergenic 25.0%
! ACTACATCATTCTACATATT+TGG + chr5_4:66012061-66012080 Msa0865390:intron 25.0%
! ACTACATCATTCTACATATT+TGG + chr5_4:66012061-66012080 Msa0865390:intron 25.0%
!! TACGTGTCAATGTATATTTT+TGG - chr5_4:66012240-66012259 None:intergenic 25.0%
!! TTTAAAATAGGAAGCAAAAG+TGG - chr5_4:66012387-66012406 None:intergenic 25.0%
!! ATTTTCCAAGTAATTTCTTC+AGG + chr5_4:66012675-66012694 Msa0865390:intron 25.0%
! ATGTATGAAAAAGAATGTGT+GGG - chr5_4:66012757-66012776 None:intergenic 25.0%
! TATGTATGAAAAAGAATGTG+TGG - chr5_4:66012758-66012777 None:intergenic 25.0%
!!! TTCCACTTTTTCTTTTTCTT+GGG - chr5_4:66013185-66013204 None:intergenic 25.0%
! AGAATTAAACAAGAAATGTG+AGG + chr5_4:66013336-66013355 Msa0865390:CDS 25.0%
GTTGAATAACGGTGAAAATT+CGG + chr5_4:66006249-66006268 Msa0865390:CDS 30.0%
GAAAAACAAGCTATGAATCT+TGG + chr5_4:66006325-66006344 Msa0865390:CDS 30.0%
AATAAAGGAAGAAAGAGATG+TGG + chr5_4:66006504-66006523 Msa0865390:CDS 30.0%
CAATGTAAAAGAAGTGATAC+AGG + chr5_4:66006676-66006695 Msa0865390:CDS 30.0%
AAGATTACATGTTTGGATCT+TGG + chr5_4:66006834-66006853 Msa0865390:intron 30.0%
!!! TTTTTGGTTGTGTCTTGTTA+AGG + chr5_4:66006885-66006904 Msa0865390:intron 30.0%
ACATCACTCTCATTCAATTT+AGG - chr5_4:66006914-66006933 None:intergenic 30.0%
ATTTCCTATAGTAAACCAGA+TGG - chr5_4:66007077-66007096 None:intergenic 30.0%
ACTATAGGAAATGAAGCATA+AGG + chr5_4:66007085-66007104 Msa0865390:intron 30.0%
TTCTCTAAGTATATGCTGAA+AGG + chr5_4:66007137-66007156 Msa0865390:CDS 30.0%
TGAAGAACAAATGATTGAGA+AGG + chr5_4:66007187-66007206 Msa0865390:CDS 30.0%
CAAAGCTAAAAATAAAACCG+GGG + chr5_4:66007322-66007341 Msa0865390:CDS 30.0%
AAAGCTAAAAATAAAACCGG+GGG + chr5_4:66007323-66007342 Msa0865390:CDS 30.0%
GATACATACTCGATCTTAAT+TGG - chr5_4:66007578-66007597 None:intergenic 30.0%
ACCATGATGACATTCATTAT+CGG - chr5_4:66007687-66007706 None:intergenic 30.0%
GTTTGCTTTACATACTAACT+CGG - chr5_4:66007750-66007769 None:intergenic 30.0%
AATTAAGCTTCAAGATGTAG+AGG + chr5_4:66007784-66007803 Msa0865390:CDS 30.0%
TATACACAATAACACAACGA+AGG + chr5_4:66007859-66007878 Msa0865390:CDS 30.0%
GAAAATGTCTTAAATCTCCA+TGG - chr5_4:66007946-66007965 None:intergenic 30.0%
AATGTACTTGAATGTACATC+TGG + chr5_4:66008004-66008023 Msa0865390:CDS 30.0%
!! CACTAAAAAAAATTGGCTTG+AGG - chr5_4:66008288-66008307 None:intergenic 30.0%
TTAGTGTAATTGGCATATGT+TGG + chr5_4:66008302-66008321 Msa0865390:intron 30.0%
CAAATTTGCCTAACATTCTT+GGG + chr5_4:66008503-66008522 Msa0865390:intron 30.0%
!! AGGTGTTGAAATTGAAAGAT+TGG + chr5_4:66008704-66008723 Msa0865390:CDS 30.0%
!! TCAGGCTTTAAACAATAATC+CGG - chr5_4:66008850-66008869 None:intergenic 30.0%
! TTATTGTTTAAAGCCTGACA+TGG + chr5_4:66008852-66008871 Msa0865390:CDS 30.0%
! TATTGTTTAAAGCCTGACAT+GGG + chr5_4:66008853-66008872 Msa0865390:CDS 30.0%
CATCATCAAACACATTACAA+TGG - chr5_4:66008945-66008964 None:intergenic 30.0%
ATAATTAAGAGGTTCATGAC+AGG - chr5_4:66008992-66009011 None:intergenic 30.0%
!! TGCACTTTTTAATACGATAC+TGG - chr5_4:66009071-66009090 None:intergenic 30.0%
TTTATGTCACTAGTCAGAAA+AGG - chr5_4:66009277-66009296 None:intergenic 30.0%
TTAATGACAGTAATTTCCTC+AGG - chr5_4:66009411-66009430 None:intergenic 30.0%
CTTAACTCAGAAGAAAGAAT+GGG - chr5_4:66009765-66009784 None:intergenic 30.0%
TCTTAACTCAGAAGAAAGAA+TGG - chr5_4:66009766-66009785 None:intergenic 30.0%
ATATACATGCAACAAAGGAA+TGG + chr5_4:66009791-66009810 Msa0865390:intron 30.0%
TTCTTGAATGAGATATCCTT+TGG + chr5_4:66009860-66009879 Msa0865390:intron 30.0%
TCAATAACCTACATTACCAA+AGG - chr5_4:66009879-66009898 None:intergenic 30.0%
AAATGGTATGATCATGAATG+GGG - chr5_4:66009902-66009921 None:intergenic 30.0%
TCATACCATTTATCTGACTA+TGG + chr5_4:66009911-66009930 Msa0865390:CDS 30.0%
TTTAGAGAAGACAAGTACAA+AGG - chr5_4:66010290-66010309 None:intergenic 30.0%
AAAAGTGAGTTTGTGATGTA+TGG - chr5_4:66010435-66010454 None:intergenic 30.0%
TTTGTCTCTCCTGAAAATAT+TGG + chr5_4:66010557-66010576 Msa0865390:CDS 30.0%
AAGAAATTCTTGACACATGA+TGG - chr5_4:66010962-66010981 None:intergenic 30.0%
!!! TATGAACTGTTTTTTCCTGA+TGG + chr5_4:66010992-66011011 Msa0865390:intron 30.0%
TGAATCCACATGATTAGATT+TGG + chr5_4:66011321-66011340 Msa0865390:intron 30.0%
GATTACCAAATCTAATCATG+TGG - chr5_4:66011329-66011348 None:intergenic 30.0%
!! TTAAATGGTGCATTTTGATG+AGG + chr5_4:66011395-66011414 Msa0865390:intron 30.0%
! TGCGTTTAAGTATTGTAACT+TGG + chr5_4:66011454-66011473 Msa0865390:intron 30.0%
TGAACATTATTCTGGATTTC+CGG + chr5_4:66011568-66011587 Msa0865390:intron 30.0%
!! ATGGGTGGATTAAAATAAGA+AGG + chr5_4:66011692-66011711 Msa0865390:intron 30.0%
TGTCTCGTTATCTAAACATT+GGG - chr5_4:66011764-66011783 None:intergenic 30.0%
! CAACAAACATGTTTTGTGTT+TGG - chr5_4:66011807-66011826 None:intergenic 30.0%
CATCATTCTACATATTTGGA+AGG + chr5_4:66012065-66012084 Msa0865390:intron 30.0%
!! ACACGAGTTGACTTTAAAAT+AGG - chr5_4:66012399-66012418 None:intergenic 30.0%
!!! ATCAGTCAACTGGATTTTTT+AGG - chr5_4:66012650-66012669 None:intergenic 30.0%
TAAAAAATCCAGTTGACTGA+TGG + chr5_4:66012649-66012668 Msa0865390:intron 30.0%
AAAAAATCCAGTTGACTGAT+GGG + chr5_4:66012650-66012669 Msa0865390:intron 30.0%
TCTCACAATTTCAATGACTT+TGG - chr5_4:66012719-66012738 None:intergenic 30.0%
CATAGCATATTCAAGGTTTA+AGG + chr5_4:66012816-66012835 Msa0865390:intron 30.0%
CAAGAATGATATTGCAAAGA+AGG - chr5_4:66012997-66013016 None:intergenic 30.0%
! ATGTTCAATGTTTTCATGAG+TGG - chr5_4:66013065-66013084 None:intergenic 30.0%
CTGATATGTAAAATTCGAAC+CGG - chr5_4:66013111-66013130 None:intergenic 30.0%
ATCCCAAGAAAAAGAAAAAG+TGG + chr5_4:66013180-66013199 Msa0865390:CDS 30.0%
!!! CTTCCACTTTTTCTTTTTCT+TGG - chr5_4:66013186-66013205 None:intergenic 30.0%
! AGAAAAGAGTTTGATGATAG+TGG + chr5_4:66013204-66013223 Msa0865390:CDS 30.0%
!!! ATAGCTTGTTTTTCTCGATC+AGG - chr5_4:66006319-66006338 None:intergenic 35.0%
!! TATGAATCTTGGTGCCAATA+CGG + chr5_4:66006336-66006355 Msa0865390:CDS 35.0%
TTCCTTAGTTAAAGCTGCTA+TGG + chr5_4:66006402-66006421 Msa0865390:CDS 35.0%
! GTTTTGCAGAAATTCAGAAG+AGG + chr5_4:66006449-66006468 Msa0865390:CDS 35.0%
AGAAATTCAGAAGAGGAAGA+TGG + chr5_4:66006456-66006475 Msa0865390:CDS 35.0%
GTTGTTAGTGAGCAGAATAA+AGG + chr5_4:66006489-66006508 Msa0865390:CDS 35.0%
TTAAGTTTCTTGTGGACTTG+TGG - chr5_4:66006619-66006638 None:intergenic 35.0%
GGATTCCTCTGAACTTAATT+TGG - chr5_4:66006644-66006663 None:intergenic 35.0%
TAAAAGAAGTGATACAGGCA+GGG + chr5_4:66006681-66006700 Msa0865390:CDS 35.0%
CCTTACCATTTGTTCAAACA+GGG - chr5_4:66006748-66006767 None:intergenic 35.0%
CCTGTTTGAACAAATGGTAA+GGG + chr5_4:66006746-66006765 Msa0865390:intron 35.0%
CTGTTTGAACAAATGGTAAG+GGG + chr5_4:66006747-66006766 Msa0865390:intron 35.0%
! TTGTTTCATATTGTGTCGGT+TGG + chr5_4:66006801-66006820 Msa0865390:intron 35.0%
! GAATCCATCTGGTTTACTAT+AGG + chr5_4:66007070-66007089 Msa0865390:intron 35.0%
GACTTCTTCCACATTTAAGA+CGG + chr5_4:66007159-66007178 Msa0865390:CDS 35.0%
ATAAGGAATACCTTGTCTCT+TGG - chr5_4:66007222-66007241 None:intergenic 35.0%
GATATTCGGATGTGAATTAC+AGG + chr5_4:66007288-66007307 Msa0865390:intron 35.0%
!!! TTTTTAGCTTTGAGAGTGAG+AGG - chr5_4:66007314-66007333 None:intergenic 35.0%
!!! TGACATTCATTATCGGCTTT+TGG - chr5_4:66007680-66007699 None:intergenic 35.0%
ATGGTTTCCTTGAAATGAGA+AGG + chr5_4:66007702-66007721 Msa0865390:CDS 35.0%
! GAAGTATCCTTCTCATTTCA+AGG - chr5_4:66007712-66007731 None:intergenic 35.0%
TAGAGGAGACTTGTGATAAT+AGG + chr5_4:66007801-66007820 Msa0865390:CDS 35.0%
ACAGATTTCTATACTGTCCT+AGG + chr5_4:66007906-66007925 Msa0865390:CDS 35.0%
CAGATTTCTATACTGTCCTA+GGG + chr5_4:66007907-66007926 Msa0865390:CDS 35.0%
! TAAGACATTTTCAATGGCAC+TGG + chr5_4:66007954-66007973 Msa0865390:CDS 35.0%
AGTACATTGCTGACAATTAC+AGG - chr5_4:66007992-66008011 None:intergenic 35.0%
! AATGTACATCTGGTTTAAGC+TGG + chr5_4:66008014-66008033 Msa0865390:CDS 35.0%
! ATGTACATCTGGTTTAAGCT+GGG + chr5_4:66008015-66008034 Msa0865390:CDS 35.0%
AGGCTGTTAATTGCATAGAT+TGG + chr5_4:66008107-66008126 Msa0865390:CDS 35.0%
TAATTGCATAGATTGGTGTG+AGG + chr5_4:66008114-66008133 Msa0865390:CDS 35.0%
GGTCTAAATTTCTTGATGTC+TGG + chr5_4:66008433-66008452 Msa0865390:intron 35.0%
CCAAGAATGTTAGGCAAATT+TGG - chr5_4:66008505-66008524 None:intergenic 35.0%
CCAAATTTGCCTAACATTCT+TGG + chr5_4:66008502-66008521 Msa0865390:intron 35.0%
AATATCCACCAATTCTTCAC+TGG + chr5_4:66008643-66008662 Msa0865390:CDS 35.0%
TTGTGTAACCAGTGAAGAAT+TGG - chr5_4:66008654-66008673 None:intergenic 35.0%
! AATTCTTCACTGGTTACACA+AGG + chr5_4:66008653-66008672 Msa0865390:CDS 35.0%
! ATTCTTCACTGGTTACACAA+GGG + chr5_4:66008654-66008673 Msa0865390:CDS 35.0%
TCTTTCAATTTCAACACCTC+AGG - chr5_4:66008703-66008722 None:intergenic 35.0%
TCCTGAAATAAATCAGAAGG+AGG - chr5_4:66008730-66008749 None:intergenic 35.0%
CGTTCCTGAAATAAATCAGA+AGG - chr5_4:66008733-66008752 None:intergenic 35.0%
! ATTGTTTAAAGCCTGACATG+GGG + chr5_4:66008854-66008873 Msa0865390:CDS 35.0%
! TATGGATTTGCTCATGATCT+TGG + chr5_4:66008895-66008914 Msa0865390:CDS 35.0%
TTCATGACAGGAAAGAGAAA+AGG - chr5_4:66008980-66008999 None:intergenic 35.0%
TGGCTATAAGGTAAATGTGT+TGG + chr5_4:66009359-66009378 Msa0865390:intron 35.0%
! TGACACTAATGATAGTGACT+TGG + chr5_4:66009515-66009534 Msa0865390:CDS 35.0%
AGAGGATGTAACCAAATTGA+AGG + chr5_4:66009587-66009606 Msa0865390:CDS 35.0%
!! AAATTGCAGTCCTTTAAAGC+AGG + chr5_4:66009647-66009666 Msa0865390:CDS 35.0%
!! GCTGATTTTACCTGCTTTAA+AGG - chr5_4:66009660-66009679 None:intergenic 35.0%
!! GAGATATCCTTTGGTAATGT+AGG + chr5_4:66009869-66009888 Msa0865390:intron 35.0%
ATGCTCCATAGTCAGATAAA+TGG - chr5_4:66009919-66009938 None:intergenic 35.0%
GGAGCATAAGATGAAACTTA+AGG + chr5_4:66009932-66009951 Msa0865390:CDS 35.0%
GCATAAGATGAAACTTAAGG+AGG + chr5_4:66009935-66009954 Msa0865390:CDS 35.0%
ATGAAACTTAAGGAGGAGTA+TGG + chr5_4:66009942-66009961 Msa0865390:CDS 35.0%
AGCTTCTGAATAAAAGTCCA+AGG - chr5_4:66010077-66010096 None:intergenic 35.0%
! TGGACTTTTATTCAGAAGCT+TGG + chr5_4:66010077-66010096 Msa0865390:CDS 35.0%
TTACCTTCAGATTTCTGACT+TGG - chr5_4:66010136-66010155 None:intergenic 35.0%
TTTGTTGGAGCAAGGAAAAA+CGG + chr5_4:66010206-66010225 Msa0865390:intron 35.0%
GCGATCACAAGATACTAATT+AGG - chr5_4:66010380-66010399 None:intergenic 35.0%
!!! TTTTTTGCAGTCATGCATCA+AGG + chr5_4:66010523-66010542 Msa0865390:intron 35.0%
! AAGCACTCACCAATATTTTC+AGG - chr5_4:66010569-66010588 None:intergenic 35.0%
ATATATTCTCACATACCGGA+GGG + chr5_4:66010847-66010866 Msa0865390:intron 35.0%
! GTATGACAATTTTCTTCACC+TGG - chr5_4:66011031-66011050 None:intergenic 35.0%
CCTTCGACATAAAATCGAAA+AGG - chr5_4:66011159-66011178 None:intergenic 35.0%
! CCTTTTCGATTTTATGTCGA+AGG + chr5_4:66011156-66011175 Msa0865390:intron 35.0%
!! TTGTAACTTGGAAGTACCTA+TGG + chr5_4:66011466-66011485 Msa0865390:intron 35.0%
GCGAAATGTGAACATTATTC+TGG + chr5_4:66011560-66011579 Msa0865390:intron 35.0%
TTGTAAGATCTTGCGTTTGT+AGG + chr5_4:66011664-66011683 Msa0865390:intron 35.0%
TTGCGTTTGTAGGAAAACAT+GGG + chr5_4:66011674-66011693 Msa0865390:intron 35.0%
GTGTCTCGTTATCTAAACAT+TGG - chr5_4:66011765-66011784 None:intergenic 35.0%
ATAGTTAATGGCAACCTTTC+CGG - chr5_4:66012001-66012020 None:intergenic 35.0%
!!! AGCCATTTATTTTAAGAGGG+AGG + chr5_4:66012275-66012294 Msa0865390:intron 35.0%
!!! GCCATTTATTTTAAGAGGGA+GGG + chr5_4:66012276-66012295 Msa0865390:intron 35.0%
TCCCTCCCTCTTAAAATAAA+TGG - chr5_4:66012280-66012299 None:intergenic 35.0%
GGGAGGGAGTAATATATATT+AGG + chr5_4:66012292-66012311 Msa0865390:intron 35.0%
AAAATATCCCATCAGTCAAC+TGG - chr5_4:66012660-66012679 None:intergenic 35.0%
TTTGGTTGAGTGAAAAGGAT+GGG - chr5_4:66012701-66012720 None:intergenic 35.0%
ATGACTTTGGTTGAGTGAAA+AGG - chr5_4:66012706-66012725 None:intergenic 35.0%
AAAAAGAATGTGTGGGAACA+TGG - chr5_4:66012750-66012769 None:intergenic 35.0%
GACATGTCATAGCATATTCA+AGG + chr5_4:66012809-66012828 Msa0865390:intron 35.0%
GAACATGTAACTCTTGTCAA+TGG - chr5_4:66012975-66012994 None:intergenic 35.0%
ATTACGTTATGACCACCATT+TGG - chr5_4:66013151-66013170 None:intergenic 35.0%
AAATGGTGGTCATAACGTAA+TGG + chr5_4:66013150-66013169 Msa0865390:CDS 35.0%
! GCTTCAATAACCACATTTTC+TGG - chr5_4:66013232-66013251 None:intergenic 35.0%
GAAGTAGAAGAAGAAGAAGA+AGG + chr5_4:66013277-66013296 Msa0865390:CDS 35.0%
AGAAGAAGGAAATGCTCTTA+TGG + chr5_4:66013291-66013310 Msa0865390:CDS 35.0%
GAAACTGCGTCGTTGAATAA+CGG + chr5_4:66006238-66006257 Msa0865390:CDS 40.0%
AACAGATTCTTCTGCTACTG+CGG - chr5_4:66006296-66006315 None:intergenic 40.0%
GGAAGATGAAATGGTAGCTA+GGG + chr5_4:66006375-66006394 Msa0865390:CDS 40.0%
! CTCCATAGCAGCTTTAACTA+AGG - chr5_4:66006407-66006426 None:intergenic 40.0%
GCTATGGAGATAATGAAACG+CGG + chr5_4:66006418-66006437 Msa0865390:CDS 40.0%
TTGAAATGATGAAGAGCCTC+CGG - chr5_4:66006533-66006552 None:intergenic 40.0%
AGGCTCTTCATCATTTCAAC+CGG + chr5_4:66006534-66006553 Msa0865390:CDS 40.0%
! GACTTGTGGAACCTCATTTT+GGG - chr5_4:66006605-66006624 None:intergenic 40.0%
! TTTACATTGATGGCACGCTA+AGG - chr5_4:66006665-66006684 None:intergenic 40.0%
GTAAAAGAAGTGATACAGGC+AGG + chr5_4:66006680-66006699 Msa0865390:CDS 40.0%
GCATACCCTGTTTGAACAAA+TGG + chr5_4:66006740-66006759 Msa0865390:CDS 40.0%
CCCTGTTTGAACAAATGGTA+AGG + chr5_4:66006745-66006764 Msa0865390:intron 40.0%
CCCTTACCATTTGTTCAAAC+AGG - chr5_4:66006749-66006768 None:intergenic 40.0%
CAAAGTGAAACAGCAGCTAA+GGG - chr5_4:66006775-66006794 None:intergenic 40.0%
ACAAAGTGAAACAGCAGCTA+AGG - chr5_4:66006776-66006795 None:intergenic 40.0%
TTGCAATTATCACAGCACAC+AGG - chr5_4:66006950-66006969 None:intergenic 40.0%
! TCTTCCACATTTAAGACGGT+TGG + chr5_4:66007163-66007182 Msa0865390:CDS 40.0%
TCATCCAACCGTCTTAAATG+TGG - chr5_4:66007170-66007189 None:intergenic 40.0%
!! TCATCTTTAGAATGATCCCC+CGG - chr5_4:66007342-66007361 None:intergenic 40.0%
TGATCTGGTAAGGACTGATT+TGG + chr5_4:66007367-66007386 Msa0865390:intron 40.0%
!!! TCATTATCGGCTTTTGGACA+GGG - chr5_4:66007674-66007693 None:intergenic 40.0%
!!! TTCATTATCGGCTTTTGGAC+AGG - chr5_4:66007675-66007694 None:intergenic 40.0%
GCCGATAATGAATGTCATCA+TGG + chr5_4:66007683-66007702 Msa0865390:CDS 40.0%
ACTAACTCGGAGATGCAATT+TGG - chr5_4:66007737-66007756 None:intergenic 40.0%
ATAACATCGGCGTTACTAAC+AGG - chr5_4:66007842-66007861 None:intergenic 40.0%
!!! CGATGAAGTTTTGGATGTGA+AGG + chr5_4:66008087-66008106 Msa0865390:CDS 40.0%
!! CGGTTTTGTAGAGTTCAGTT+AGG - chr5_4:66008256-66008275 None:intergenic 40.0%
!! AAATTGGCTTGAGGTTCACA+CGG - chr5_4:66008279-66008298 None:intergenic 40.0%
ACAATTCGCCCAAGAATGTT+AGG - chr5_4:66008514-66008533 None:intergenic 40.0%
TGTAACCAGTGAAGAATTGG+TGG - chr5_4:66008651-66008670 None:intergenic 40.0%
! TTCTTCACTGGTTACACAAG+GGG + chr5_4:66008655-66008674 Msa0865390:CDS 40.0%
GCCTCCTTCTGATTTATTTC+AGG + chr5_4:66008726-66008745 Msa0865390:CDS 40.0%
AGGTTGAGAGAACCACTAAA+AGG - chr5_4:66008814-66008833 None:intergenic 40.0%
TAAAGTGGAACTGAAACCTG+AGG + chr5_4:66009392-66009411 Msa0865390:CDS 40.0%
AGCACCTTGAGCAAGATAAA+AGG + chr5_4:66009445-66009464 Msa0865390:CDS 40.0%
GCACCTTGAGCAAGATAAAA+GGG + chr5_4:66009446-66009465 Msa0865390:CDS 40.0%
CAAGATAAAAGGGAGCTAGT+TGG + chr5_4:66009456-66009475 Msa0865390:CDS 40.0%
AAAAGGGAGCTAGTTGGTTA+TGG + chr5_4:66009462-66009481 Msa0865390:CDS 40.0%
AAAGGGAGCTAGTTGGTTAT+GGG + chr5_4:66009463-66009482 Msa0865390:CDS 40.0%
! CACTAATGATAGTGACTTGG+TGG + chr5_4:66009518-66009537 Msa0865390:CDS 40.0%
!! AATGATAGTGACTTGGTGGT+TGG + chr5_4:66009522-66009541 Msa0865390:CDS 40.0%
!! GTGCTATCTGGGATATTTTC+CGG + chr5_4:66009562-66009581 Msa0865390:CDS 40.0%
ATTTGGTTACATCCTCTCTC+CGG - chr5_4:66009584-66009603 None:intergenic 40.0%
!! TTCAGATTTCTGACTTGGTG+AGG - chr5_4:66010131-66010150 None:intergenic 40.0%
TCACCAAGTCAGAAATCTGA+AGG + chr5_4:66010130-66010149 Msa0865390:CDS 40.0%
ATCTGTGATTTATCGGAAGC+CGG - chr5_4:66010613-66010632 None:intergenic 40.0%
! TTGGCGGATCTGTGATTTAT+CGG - chr5_4:66010620-66010639 None:intergenic 40.0%
CATATATTCTCACATACCGG+AGG + chr5_4:66010846-66010865 Msa0865390:intron 40.0%
GACACATGATGGCATAAAAC+AGG - chr5_4:66010951-66010970 None:intergenic 40.0%
TTACAGGTCTGAGAAAACCA+AGG + chr5_4:66011260-66011279 Msa0865390:intron 40.0%
GTATATTTACGCGCATACCT+TGG - chr5_4:66011280-66011299 None:intergenic 40.0%
TATGCGCGTAAATATACCAG+AGG + chr5_4:66011283-66011302 Msa0865390:intron 40.0%
ATGCGCGTAAATATACCAGA+GGG + chr5_4:66011284-66011303 Msa0865390:intron 40.0%
CGCAAAAACATGATGCAACA+AGG - chr5_4:66011543-66011562 None:intergenic 40.0%
GGATTTCCGGTGAATGATAT+TGG + chr5_4:66011581-66011600 Msa0865390:intron 40.0%
AGCGTTCCAATATCATTCAC+CGG - chr5_4:66011590-66011609 None:intergenic 40.0%
CTTGCGTTTGTAGGAAAACA+TGG + chr5_4:66011673-66011692 Msa0865390:intron 40.0%
!! AACTGACTTTTTGTGAGTGC+CGG + chr5_4:66011979-66011998 Msa0865390:intron 40.0%
ATGGGCCTGAAGAAATTACT+TGG - chr5_4:66012683-66012702 None:intergenic 40.0%
CTTTGGTTGAGTGAAAAGGA+TGG - chr5_4:66012702-66012721 None:intergenic 40.0%
TTGCACAAGGAATGGCTTAA+AGG - chr5_4:66012933-66012952 None:intergenic 40.0%
CTAGAGAATTGCACAAGGAA+TGG - chr5_4:66012941-66012960 None:intergenic 40.0%
!! TCATGAGTGGTTGATGAAGA+GGG - chr5_4:66013052-66013071 None:intergenic 40.0%
!! TTCATGAGTGGTTGATGAAG+AGG - chr5_4:66013053-66013072 None:intergenic 40.0%
TCAGAGATCACAGAACCAAA+TGG + chr5_4:66013133-66013152 Msa0865390:CDS 40.0%
!! GATAGTGGAACCAGAAAATG+TGG + chr5_4:66013219-66013238 Msa0865390:CDS 40.0%
GGTGAAAATTCGGTTGAAGC+TGG + chr5_4:66006259-66006278 Msa0865390:CDS 45.0%
GCTGTTGACGGAAGATGAAA+TGG + chr5_4:66006366-66006385 Msa0865390:CDS 45.0%
CGGAAGATGAAATGGTAGCT+AGG + chr5_4:66006374-66006393 Msa0865390:CDS 45.0%
GAAGAAAGAGATGTGGTAGC+CGG + chr5_4:66006511-66006530 Msa0865390:CDS 45.0%
GAGAAAGAGAAAAGCGGAGA+AGG + chr5_4:66006573-66006592 Msa0865390:CDS 45.0%
GAAGGAATCCACCCAAAATG+AGG + chr5_4:66006591-66006610 Msa0865390:CDS 45.0%
! TTGTGGAACCTCATTTTGGG+TGG - chr5_4:66006602-66006621 None:intergenic 45.0%
! GGACTTGTGGAACCTCATTT+TGG - chr5_4:66006606-66006625 None:intergenic 45.0%
GGTCGAAACCAACAATGATG+AGG + chr5_4:66007106-66007125 Msa0865390:CDS 45.0%
CTCGACTTCCTCATCATTGT+TGG - chr5_4:66007117-66007136 None:intergenic 45.0%
GAAAGAGAAGCCAAGAGACA+AGG + chr5_4:66007209-66007228 Msa0865390:CDS 45.0%
CTAAAGATGAGCGTGTGATC+TGG + chr5_4:66007352-66007371 Msa0865390:CDS 45.0%
! GGCATTTTGTACAGCTTCTG+TGG - chr5_4:66007490-66007509 None:intergenic 45.0%
AGAGGAGACAAAGGTCAAAG+CGG - chr5_4:66007511-66007530 None:intergenic 45.0%
CGAGTATGTATCACAGACTG+AGG + chr5_4:66007586-66007605 Msa0865390:CDS 45.0%
AATCGTGAGTGGTCAAGATC+TGG + chr5_4:66007620-66007639 Msa0865390:CDS 45.0%
ATCGTGAGTGGTCAAGATCT+GGG + chr5_4:66007621-66007640 Msa0865390:CDS 45.0%
AACTCGGAGATGCAATTTGG+AGG - chr5_4:66007734-66007753 None:intergenic 45.0%
! TTTCAATGGCACTGGAGCAA+AGG + chr5_4:66007962-66007981 Msa0865390:CDS 45.0%
! TTCAATGGCACTGGAGCAAA+GGG + chr5_4:66007963-66007982 Msa0865390:CDS 45.0%
! AATGCACGCCACATGACTTT+TGG - chr5_4:66008043-66008062 None:intergenic 45.0%
! ATGAACTCAGCATGATGACG+AGG - chr5_4:66008760-66008779 None:intergenic 45.0%
!!! TATGTTTTTGGCCCCATGTC+AGG - chr5_4:66008868-66008887 None:intergenic 45.0%
TTTGCTCATGATCTTGGACG+TGG + chr5_4:66008901-66008920 Msa0865390:CDS 45.0%
TTGCTCATGATCTTGGACGT+GGG + chr5_4:66008902-66008921 Msa0865390:CDS 45.0%
! GCTCCCTTTTATCTTGCTCA+AGG - chr5_4:66009452-66009471 None:intergenic 45.0%
AAGGGAGCTAGTTGGTTATG+GGG + chr5_4:66009464-66009483 Msa0865390:CDS 45.0%
!! ATAGTGACTTGGTGGTTGGA+GGG + chr5_4:66009526-66009545 Msa0865390:CDS 45.0%
TCCCAGATAGCACCTTCTAA+GGG - chr5_4:66009555-66009574 None:intergenic 45.0%
ATCCCAGATAGCACCTTCTA+AGG - chr5_4:66009556-66009575 None:intergenic 45.0%
AACCCTCCAAAAGGTCATGA+GGG - chr5_4:66009718-66009737 None:intergenic 45.0%
ATGCAACAAAGGAATGGCGA+AGG + chr5_4:66009797-66009816 Msa0865390:intron 45.0%
GACTTGCAGGAATTGAACCT+TGG + chr5_4:66010057-66010076 Msa0865390:intron 45.0%
GATAAATCACAGATCCGCCA+AGG + chr5_4:66010619-66010638 Msa0865390:CDS 45.0%
ACAGACCTCAAACTTGTCCT+TGG - chr5_4:66010639-66010658 None:intergenic 45.0%
! TTTTCCTGATGGCTGCTTCT+TGG + chr5_4:66011003-66011022 Msa0865390:intron 45.0%
CTGCTGATAGTTAGCACCAT+AGG - chr5_4:66011485-66011504 None:intergenic 45.0%
CGTTTGTAGGAAAACATGGG+TGG + chr5_4:66011677-66011696 Msa0865390:intron 45.0%
!!! ACTTTTTGTGAGTGCCGGAA+AGG + chr5_4:66011984-66012003 Msa0865390:intron 45.0%
AGCTGCTAGAGAATTGCACA+AGG - chr5_4:66012946-66012965 None:intergenic 45.0%
GAGATCACAGAACCAAATGG+TGG + chr5_4:66013136-66013155 Msa0865390:CDS 45.0%
TCAACGACGCAGTTTCAGCA+GGG - chr5_4:66006234-66006253 None:intergenic 50.0%
TTCAACGACGCAGTTTCAGC+AGG - chr5_4:66006235-66006254 None:intergenic 50.0%
! TTCGGTTGAAGCTGGTGATG+TGG + chr5_4:66006267-66006286 Msa0865390:CDS 50.0%
!! GAATCTTGGTGCCAATACGG+TGG + chr5_4:66006339-66006358 Msa0865390:CDS 50.0%
CAACCGGAGAGAAAGAAACG+CGG + chr5_4:66006550-66006569 Msa0865390:CDS 50.0%
AACCGGAGAGAAAGAAACGC+GGG + chr5_4:66006551-66006570 Msa0865390:CDS 50.0%
ACGCGGGAGAAAGAGAAAAG+CGG + chr5_4:66006567-66006586 Msa0865390:CDS 50.0%
ACAGCACACAGGACATGCTT+CGG - chr5_4:66006939-66006958 None:intergenic 50.0%
GATGAGCGTGTGATCTGGTA+AGG + chr5_4:66007357-66007376 Msa0865390:intron 50.0%
CGCAACAACAGAGGAGACAA+AGG - chr5_4:66007520-66007539 None:intergenic 50.0%
ACGAGTCTACGAATCGTGAG+TGG + chr5_4:66007609-66007628 Msa0865390:CDS 50.0%
AGATCTGGGTGGCATGCAAA+TGG + chr5_4:66007635-66007654 Msa0865390:CDS 50.0%
TGGTGTAGATCTACAGCCCT+AGG - chr5_4:66007926-66007945 None:intergenic 50.0%
AGGGCTGTAGATCTACACCA+TGG + chr5_4:66007926-66007945 Msa0865390:CDS 50.0%
! TCAATGGCACTGGAGCAAAG+GGG + chr5_4:66007964-66007983 Msa0865390:CDS 50.0%
GCTGGGAACCAAAAGTCATG+TGG + chr5_4:66008032-66008051 Msa0865390:CDS 50.0%
! CAACCTTGCTGTGAAGTTGC+CGG + chr5_4:66008828-66008847 Msa0865390:CDS 50.0%
AATCCGGCAACTTCACAGCA+AGG - chr5_4:66008834-66008853 None:intergenic 50.0%
TGCTCATGATCTTGGACGTG+GGG + chr5_4:66008903-66008922 Msa0865390:CDS 50.0%
GTTGGCGCATATCGCTAAAG+TGG + chr5_4:66009377-66009396 Msa0865390:CDS 50.0%
!! GATAGTGACTTGGTGGTTGG+AGG + chr5_4:66009525-66009544 Msa0865390:CDS 50.0%
!! TAGTGACTTGGTGGTTGGAG+GGG + chr5_4:66009527-66009546 Msa0865390:CDS 50.0%
!! ACCCCTTAGAAGGTGCTATC+TGG + chr5_4:66009550-66009569 Msa0865390:CDS 50.0%
CCCAGATAGCACCTTCTAAG+GGG - chr5_4:66009554-66009573 None:intergenic 50.0%
!! CCCCTTAGAAGGTGCTATCT+GGG + chr5_4:66009551-66009570 Msa0865390:CDS 50.0%
! CTGGGATATTTTCCGGAGAG+AGG + chr5_4:66009569-66009588 Msa0865390:CDS 50.0%
! GGATTCCCCTCATGACCTTT+TGG + chr5_4:66009709-66009728 Msa0865390:intron 50.0%
! TTCCCCTCATGACCTTTTGG+AGG + chr5_4:66009712-66009731 Msa0865390:intron 50.0%
! TCCCCTCATGACCTTTTGGA+GGG + chr5_4:66009713-66009732 Msa0865390:intron 50.0%
ACCCTCCAAAAGGTCATGAG+GGG - chr5_4:66009717-66009736 None:intergenic 50.0%
CAACCCTCCAAAAGGTCATG+AGG - chr5_4:66009719-66009738 None:intergenic 50.0%
!! ACCTTTTGGAGGGTTGCACT+AGG + chr5_4:66009723-66009742 Msa0865390:intron 50.0%
TCCTAGTGCAACCCTCCAAA+AGG - chr5_4:66009727-66009746 None:intergenic 50.0%
!!! GATGCTGTTTTCATTCCCGC+TGG + chr5_4:66010101-66010120 Msa0865390:CDS 50.0%
TGAGTGCTTGCGTTTGACAG+AGG + chr5_4:66010580-66010599 Msa0865390:CDS 50.0%
GTTTGACAGAGGAATTCCGC+CGG + chr5_4:66010591-66010610 Msa0865390:CDS 50.0%
TGTGATTTATCGGAAGCCGG+CGG - chr5_4:66010610-66010629 None:intergenic 50.0%
ATCCGCCAAGGACAAGTTTG+AGG + chr5_4:66010631-66010650 Msa0865390:CDS 50.0%
GACCTCAAACTTGTCCTTGG+CGG - chr5_4:66010636-66010655 None:intergenic 50.0%
GTTATGCAAGACTTGCCCTC+CGG - chr5_4:66010865-66010884 None:intergenic 50.0%
GGAGGGCAAGTCTTGCATAA+CGG + chr5_4:66010864-66010883 Msa0865390:intron 50.0%
AATCTCTCTCTCTCTCCCTC+TGG - chr5_4:66011302-66011321 None:intergenic 50.0%
TCGACAGTGAGAAGAGTGAC+CGG + chr5_4:66013089-66013108 Msa0865390:CDS 50.0%
CAACAGCGACTCCACCGTAT+TGG - chr5_4:66006353-66006372 None:intergenic 55.0%
TACGGTGGAGTCGCTGTTGA+CGG + chr5_4:66006354-66006373 Msa0865390:CDS 55.0%
GAAAGAGATGTGGTAGCCGG+AGG + chr5_4:66006514-66006533 Msa0865390:CDS 55.0%
CTCCCGCGTTTCTTTCTCTC+CGG - chr5_4:66006556-66006575 None:intergenic 55.0%
CACCTAGAAGCTTCCCACCA+CGG - chr5_4:66007547-66007566 None:intergenic 55.0%
GTGAGTGGTCAAGATCTGGG+TGG + chr5_4:66007624-66007643 Msa0865390:CDS 55.0%
! TTGGCTTGAGGTTCACACGG+CGG - chr5_4:66008276-66008295 None:intergenic 55.0%
TGGTTACACAAGGGGTCGCA+AGG + chr5_4:66008663-66008682 Msa0865390:CDS 55.0%
ACACAAGGGGTCGCAAGGAT+TGG + chr5_4:66008668-66008687 Msa0865390:CDS 55.0%
! GTCGCAAGGATTGGCGCAAT+TGG + chr5_4:66008677-66008696 Msa0865390:CDS 55.0%
GGAGCTAGTTGGTTATGGGG+AGG + chr5_4:66009467-66009486 Msa0865390:CDS 55.0%
GCTAGTTGGTTATGGGGAGG+CGG + chr5_4:66009470-66009489 Msa0865390:CDS 55.0%
GGTACCAAGAAGCAGCCATC+AGG - chr5_4:66011010-66011029 None:intergenic 55.0%
GATGGCTGCTTCTTGGTACC+AGG + chr5_4:66011010-66011029 Msa0865390:intron 55.0%
GGTCACTCTTCTCACTGTCG+AGG - chr5_4:66013090-66013109 None:intergenic 55.0%
CACGGAGCTCGCAACAACAG+AGG - chr5_4:66007529-66007548 None:intergenic 60.0%
CTCTGTTGTTGCGAGCTCCG+TGG + chr5_4:66007527-66007546 Msa0865390:CDS 60.0%
TGTTGTTGCGAGCTCCGTGG+TGG + chr5_4:66007530-66007549 Msa0865390:CDS 60.0%
GTTGTTGCGAGCTCCGTGGT+GGG + chr5_4:66007531-66007550 Msa0865390:CDS 60.0%
! CTCCGTGGTGGGAAGCTTCT+AGG + chr5_4:66007542-66007561 Msa0865390:CDS 60.0%
! CGTGGTGGGAAGCTTCTAGG+TGG + chr5_4:66007545-66007564 Msa0865390:CDS 60.0%
GGGTGGCATGCAAATGGCGA+TGG + chr5_4:66007641-66007660 Msa0865390:CDS 60.0%
! GGATTGGCGCAATTGGCCTG+AGG + chr5_4:66008684-66008703 Msa0865390:CDS 60.0%
GTTGGAGGGGACCCCTTAGA+AGG + chr5_4:66009540-66009559 Msa0865390:CDS 60.0%
! ACTTGGTGAGGCAAGCCAGC+GGG - chr5_4:66010119-66010138 None:intergenic 60.0%
!! GACTTGGTGAGGCAAGCCAG+CGG - chr5_4:66010120-66010139 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 66006220 66013423 66006220 ID=Msa0865390;Name=Msa0865390
chr5_4 mRNA 66006220 66013423 66006220 ID=Msa0865390-mRNA-1;Parent=Msa0865390;Name=Msa0865390-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|0.25|0.15|0.69|1|1|13|0|1000
chr5_4 exon 66006220 66006761 66006220 ID=Msa0865390-mRNA-1:exon:20871;Parent=Msa0865390-mRNA-1
chr5_4 exon 66006907 66007006 66006907 ID=Msa0865390-mRNA-1:exon:20872;Parent=Msa0865390-mRNA-1
chr5_4 exon 66007092 66007230 66007092 ID=Msa0865390-mRNA-1:exon:20873;Parent=Msa0865390-mRNA-1
chr5_4 exon 66007310 66007373 66007310 ID=Msa0865390-mRNA-1:exon:20874;Parent=Msa0865390-mRNA-1
chr5_4 exon 66007457 66008135 66007457 ID=Msa0865390-mRNA-1:exon:20875;Parent=Msa0865390-mRNA-1
chr5_4 exon 66008634 66008963 66008634 ID=Msa0865390-mRNA-1:exon:20876;Parent=Msa0865390-mRNA-1
chr5_4 exon 66009369 66009668 66009369 ID=Msa0865390-mRNA-1:exon:20877;Parent=Msa0865390-mRNA-1
chr5_4 exon 66009891 66009963 66009891 ID=Msa0865390-mRNA-1:exon:20878;Parent=Msa0865390-mRNA-1
chr5_4 exon 66010066 66010151 66010066 ID=Msa0865390-mRNA-1:exon:20879;Parent=Msa0865390-mRNA-1
chr5_4 exon 66010533 66010652 66010533 ID=Msa0865390-mRNA-1:exon:20880;Parent=Msa0865390-mRNA-1
chr5_4 exon 66011032 66011090 66011032 ID=Msa0865390-mRNA-1:exon:20881;Parent=Msa0865390-mRNA-1
chr5_4 exon 66011266 66011281 66011266 ID=Msa0865390-mRNA-1:exon:20882;Parent=Msa0865390-mRNA-1
chr5_4 exon 66012929 66013423 66012929 ID=Msa0865390-mRNA-1:exon:20883;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66006220 66006761 66006220 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66006907 66007006 66006907 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66007092 66007230 66007092 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66007310 66007373 66007310 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66007457 66008135 66007457 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66008634 66008963 66008634 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66009369 66009668 66009369 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66009891 66009963 66009891 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66010066 66010151 66010066 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66010533 66010652 66010533 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66011032 66011090 66011032 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66011266 66011281 66011266 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
chr5_4 CDS 66012929 66013423 66012929 ID=Msa0865390-mRNA-1:cds;Parent=Msa0865390-mRNA-1
Gene Sequence

>Msa0865390

ATGAATGGTGGCCCTGCTGAAACTGCGTCGTTGAATAACGGTGAAAATTCGGTTGAAGCTGGTGATGTGGCAGCCGCAGTAGCAGAAGAATCTGTTCCTGATCGAGAAAAACAAGCTATGAATCTTGGTGCCAATACGGTGGAGTCGCTGTTGACGGAAGATGAAATGGTAGCTAGGGATTCTTCCTTAGTTAAAGCTGCTATGGAGATAATGAAACGCGGAAGAAAGAGTTTTGCAGAAATTCAGAAGAGGAAGATGGATGAAGAAGCGTTGTTAGTGAGCAGAATAAAGGAAGAAAGAGATGTGGTAGCCGGAGGCTCTTCATCATTTCAACCGGAGAGAAAGAAACGCGGGAGAAAGAGAAAAGCGGAGAAGGAATCCACCCAAAATGAGGTTCCACAAGTCCACAAGAAACTTAATACCAAATTAAGTTCAGAGGAATCCTTAGCGTGCCATCAATGTAAAAGAAGTGATACAGGCAGGGTTATAAGATGCACAAAATGCAAACGAAGAAGATATTGCATACCCTGTTTGAACAAATGGTATCCTAAATTGAATGAGAGTGATGTTGCCGAAGCATGTCCTGTGTGCTGTGATAATTGCAATTGTAAAGCATGCTTGCGATCTTTTAAACTCATCAATGAAATGAAGCATAAGGTCGAAACCAACAATGATGAGGAAGTCGAGTTCTCTAAGTATATGCTGAAAGGACTTCTTCCACATTTAAGACGGTTGGATGAAGAACAAATGATTGAGAAGGAAAGAGAAGCCAAGAGACAAGGCCTCTCACTCTCAAAGCTAAAAATAAAACCGGGGGATCATTCTAAAGATGAGCGTGTGATCTGTGACAACTGCAAAACATCAATATTTGACTACCACAGAAGCTGTACAAAATGCCGCTTTGACCTTTGTCTCCTCTGTTGTTGCGAGCTCCGTGGTGGGAAGCTTCTAGGTGGCGCAGATCCAATTAAGATCGAGTATGTATCACAGACTGAGGACGAGTCTACGAATCGTGAGTGGTCAAGATCTGGGTGGCATGCAAATGGCGATGGTAGCATTCCCTGTCCAAAAGCCGATAATGAATGTCATCATGGTTTCCTTGAAATGAGAAGGATACTTCCTCCAAATTGCATCTCCGAGTTAGTATGTAAAGCAAACGAACTTGCAGAAACAATTAAGCTTCAAGATGTAGAGGAGACTTGTGATAATAGGTGTTCTTGCTTGAAACCTGTTAGTAACGCCGATGTTATACACAATAACACAACGAAGGCAGCTTTTCTTGAAAATTCAAGTGACAGATTTCTATACTGTCCTAGGGCTGTAGATCTACACCATGGAGATTTAAGACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGTACATCTGGTTTAAGCTGGGAACCAAAAGTCATGTGGCGTGCATTCCGTCAAAAAACCAATTCTAAATACGATGAAGTTTTGGATGTGAAGGCTGTTAATTGCATAGATTGGTGTGAGAGAGATATTAATATCCACCAATTCTTCACTGGTTACACAAGGGGTCGCAAGGATTGGCGCAATTGGCCTGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTGATTTATTTCAGGAACGTTTACCTCGTCATCATGCTGAGTTCATAACTTCCTTGCCTTATAAAGAATATACAAATCCTTTTAGTGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTTTAAAGCCTGACATGGGGCCAAAAACATATATTGCTTATGGATTTGCTCATGATCTTGGACGTGGGGATTCAGTGACTAAGCTCCATTGTAATGTGTTTGATGATGTAAATGTGTTGGCGCATATCGCTAAAGTGGAACTGAAACCTGAGGAAATTACTGTCATTAAGAAATTGAGACATAAGCACCTTGAGCAAGATAAAAGGGAGCTAGTTGGTTATGGGGAGGCGGTTGATATGTTTCATCAACAATCTGACACTAATGATAGTGACTTGGTGGTTGGAGGGGACCCCTTAGAAGGTGCTATCTGGGATATTTTCCGGAGAGAGGATGTAACCAAATTGAAGGAATATATAAAGAAGCATTTTAGAGAGTTCAGACATGTAAATTGCAGTCCTTTAAAGCAGGTTATTGACCCCATTCATGATCATACCATTTATCTGACTATGGAGCATAAGATGAAACTTAAGGAGGAGTATGGAATTGAACCTTGGACTTTTATTCAGAAGCTTGGAGATGCTGTTTTCATTCCCGCTGGCTTGCCTCACCAAGTCAGAAATCTGAAGTCATGCATCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATATTGGTGAGTGCTTGCGTTTGACAGAGGAATTCCGCCGGCTTCCGATAAATCACAGATCCGCCAAGGACAAGTTTGAGGTGAAGAAAATTGTCATACATGCTATGCTTGATGTAATTGAAAAATTAGAGAAAGAAAGGTCTGAGAAAACCAAGTCCTTTAAGCCATTCCTTGTGCAATTCTCTAGCAGCTACTACACCATTGACAAGAGTTACATGTTCCTTCTTTGCAATATCATTCTTGCTTTTATAGCATTATATTCAAGTTTAATCAATCCCTCTTCATCAACCACTCATGAAAACATTGAACATGTCCTCGACAGTGAGAAGAGTGACCGGTTCGAATTTTACATATCAGAATCAGAGATCACAGAACCAAATGGTGGTCATAACGTAATGGAAAGTGAATCCCAAGAAAAAGAAAAAGTGGAAGAAAAGAGTTTGATGATAGTGGAACCAGAAAATGTGGTTATTGAAGCAGAAAAAGTTGAAGAAGAAGAAGAAGAAGTAGAAGAAGAAGAAGAAGGAAATGCTCTTATGGTAAATGATGAAGATGAAATAGAAGAATTAAACAAGAAATGTGAGGATTTTATCAAAAAGATGAAAGCTACTTTCTATTATGATTCAAGAGCTGAGAATGTGTTATTTTGA
Protein sequence

>Msa0865390

MNGGPAETASLNNGENSVEAGDVAAAVAEESVPDREKQAMNLGANTVESLLTEDEMVARDSSLVKAAMEIMKRGRKSFAEIQKRKMDEEALLVSRIKEERDVVAGGSSSFQPERKKRGRKRKAEKESTQNEVPQVHKKLNTKLSSEESLACHQCKRSDTGRVIRCTKCKRRRYCIPCLNKWYPKLNESDVAEACPVCCDNCNCKACLRSFKLINEMKHKVETNNDEEVEFSKYMLKGLLPHLRRLDEEQMIEKEREAKRQGLSLSKLKIKPGDHSKDERVICDNCKTSIFDYHRSCTKCRFDLCLLCCCELRGGKLLGGADPIKIEYVSQTEDESTNREWSRSGWHANGDGSIPCPKADNECHHGFLEMRRILPPNCISELVCKANELAETIKLQDVEETCDNRCSCLKPVSNADVIHNNTTKAAFLENSSDRFLYCPRAVDLHHGDLRHFQWHWSKGEPVIVSNVLECTSGLSWEPKVMWRAFRQKTNSKYDEVLDVKAVNCIDWCERDINIHQFFTGYTRGRKDWRNWPEVLKLKDWPPSDLFQERLPRHHAEFITSLPYKEYTNPFSGSLNLAVKLPDYCLKPDMGPKTYIAYGFAHDLGRGDSVTKLHCNVFDDVNVLAHIAKVELKPEEITVIKKLRHKHLEQDKRELVGYGEAVDMFHQQSDTNDSDLVVGGDPLEGAIWDIFRREDVTKLKEYIKKHFREFRHVNCSPLKQVIDPIHDHTIYLTMEHKMKLKEEYGIEPWTFIQKLGDAVFIPAGLPHQVRNLKSCIKVALDFVSPENIGECLRLTEEFRRLPINHRSAKDKFEVKKIVIHAMLDVIEKLEKERSEKTKSFKPFLVQFSSSYYTIDKSYMFLLCNIILAFIALYSSLINPSSSTTHENIEHVLDSEKSDRFEFYISESEITEPNGGHNVMESESQEKEKVEEKSLMIVEPENVVIEAEKVEEEEEEVEEEEEGNALMVNDEDEIEELNKKCEDFIKKMKATFYYDSRAENVLF*