AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1308620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308620 MtrunA17_Chr8g0335131 87.660 235 16 3 5 227 72 305 1.71e-107 311
Msa1308620 MtrunA17_Chr5g0399491 61.364 220 55 8 19 225 86 288 7.47e-75 228
Msa1308620 MtrunA17_Chr4g0055851 56.951 223 62 7 8 218 65 265 9.41e-70 214
Msa1308620 MtrunA17_Chr7g0258831 56.150 187 55 6 11 181 98 273 1.43e-52 171
Msa1308620 MtrunA17_Chr1g0175651 61.250 160 31 6 36 183 129 269 1.18e-50 166
Msa1308620 MtrunA17_Chr2g0308611 64.085 142 34 4 62 191 187 323 3.47e-49 164
Msa1308620 MtrunA17_Chr4g0054421 62.595 131 31 4 62 180 115 239 1.70e-46 155
Msa1308620 MtrunA17_Chr5g0400781 55.102 147 48 4 73 202 117 262 1.50e-44 150
Msa1308620 MtrunA17_Chr1g0151971 48.837 172 62 7 24 180 84 244 1.48e-37 132
Msa1308620 MtrunA17_Chr4g0044091 52.800 125 40 4 73 179 59 182 2.22e-32 116
Msa1308620 MtrunA17_Chr3g0135331 54.472 123 44 3 78 189 144 265 3.67e-31 116
Msa1308620 MtrunA17_Chr2g0299031 54.639 97 35 1 93 180 99 195 2.96e-28 106
Msa1308620 MtrunA17_Chr4g0071411 55.556 99 32 1 93 179 105 203 6.69e-25 97.8
Msa1308620 MtrunA17_Chr7g0217111 42.574 101 56 2 60 160 65 163 7.56e-14 68.9
Msa1308620 MtrunA17_Chr6g0453021 40.000 110 63 1 45 151 62 171 7.50e-13 66.2
Msa1308620 MtrunA17_Chr5g0416391 40.385 104 54 3 51 151 54 152 8.70e-13 66.2
Msa1308620 MtrunA17_Chr6g0450991 47.887 71 36 1 78 147 68 138 1.07e-12 65.9
Msa1308620 MtrunA17_Chr4g0060031 44.037 109 56 2 53 156 67 175 1.09e-12 66.2
Msa1308620 MtrunA17_Chr8g0362151 36.364 132 61 4 23 151 41 152 1.29e-12 65.5
Msa1308620 MtrunA17_Chr5g0415941 36.134 119 74 2 78 195 88 205 1.80e-12 65.5
Msa1308620 MtrunA17_Chr3g0119291 54.545 55 25 0 96 150 79 133 6.02e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308620 AT3G60390.1 62.281 228 52 7 19 224 94 309 9.12e-77 234
Msa1308620 AT5G47370.1 54.505 222 56 8 19 218 67 265 1.75e-65 204
Msa1308620 AT4G17460.1 52.863 227 64 8 14 220 67 270 3.25e-63 198
Msa1308620 AT2G44910.1 59.722 216 66 7 24 225 108 316 5.53e-61 194
Msa1308620 AT4G16780.1 56.682 217 54 7 13 217 78 266 5.06e-58 185
Msa1308620 AT5G06710.1 57.754 187 52 8 24 191 135 313 1.75e-54 177
Msa1308620 AT4G37790.1 52.841 176 61 5 53 216 106 271 2.63e-49 162
Msa1308620 AT2G22800.1 62.500 120 32 3 73 180 107 225 1.79e-43 147
Msa1308620 AT2G01430.1 45.143 175 76 6 42 202 101 269 3.62e-34 123
Msa1308620 AT1G70920.2 46.667 135 58 5 63 191 29 155 1.18e-26 101
Msa1308620 AT1G70920.1 46.667 135 58 5 63 191 59 185 1.35e-26 102
Msa1308620 AT5G06710.4 52.632 114 37 6 24 127 135 241 1.63e-21 90.5
Msa1308620 AT1G69780.1 40.323 124 61 4 31 151 47 160 7.84e-15 72.4
Msa1308620 AT2G01430.2 41.667 108 55 4 42 144 101 205 7.60e-14 68.6
Msa1308620 AT1G26960.1 41.905 105 49 3 53 151 48 146 1.76e-13 68.2
Msa1308620 AT5G15150.1 44.286 70 39 0 96 165 135 204 1.92e-12 65.9
Msa1308620 AT3G01470.1 47.887 71 36 1 78 147 69 139 1.21e-11 63.2
Msa1308620 AT3G01220.1 45.455 66 36 0 96 161 107 172 2.37e-11 62.4
Msa1308620 AT5G65310.1 42.424 99 53 2 61 156 54 151 3.03e-11 62.4
Msa1308620 AT5G65310.2 42.424 99 53 2 61 156 36 133 3.88e-11 62.0

Find 71 sgRNAs with CRISPR-Local

Find 614 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATGGCCGGGAACGGTTT+TGG 0.248109 8_4:-4907819 None:intergenic
CACTTCAGTTTGCTTCAACT+TGG 0.366945 8_4:-4907517 None:intergenic
GGCGTTGGCCGTTGAACACT+TGG 0.385035 8_4:-4907769 None:intergenic
TGCGGCGGCCGTCGCCGCCA+TGG 0.395192 8_4:-4897045 None:intergenic
TGTCTATCCAAAACCGTTCC+CGG 0.399248 8_4:+4907812 Msa1308620:CDS
GGCCAACGCCTGTCACCCCT+TGG 0.421288 8_4:+4907782 Msa1308620:CDS
AACCACACCTCCACTTGTCT+TGG 0.434860 8_4:-4906847 None:intergenic
AACACTTGGGCCTGACGGAT+TGG 0.438239 8_4:-4907755 None:intergenic
GATGATGACGGCGGAGGTTG+TGG 0.445037 8_4:+4897206 Msa1308620:CDS
ATGCTTGACACGGTGCTGTT+CGG 0.456039 8_4:-4897095 None:intergenic
AGAAAACGACGCCATCGAAA+GGG 0.458011 8_4:+4897154 Msa1308620:CDS
TCTGCTTCAGCCAATCCGTC+AGG 0.466994 8_4:+4907745 Msa1308620:CDS
GCGGCCGTCGCCGCCATGGA+TGG 0.472789 8_4:-4897041 None:intergenic
AGAAGTGAAAGAGAAGGAAA+CGG 0.474300 8_4:+4897128 Msa1308620:CDS
AGACTCTAACTGATGAGAAT+AGG 0.482124 8_4:+4907568 Msa1308620:CDS
GCCCAAGGGGTGACAGGCGT+TGG 0.487561 8_4:-4907784 None:intergenic
GAAGGAACAGTCAATGTTGT+TGG 0.498061 8_4:+4897268 Msa1308620:intron
TTCATTTGCATGTAGAGTTG+TGG 0.503551 8_4:-4907631 None:intergenic
GCCAACGCCTGTCACCCCTT+GGG 0.504573 8_4:+4907783 Msa1308620:CDS
TGGATAGACATTGCCGCCCA+AGG 0.513858 8_4:-4907799 None:intergenic
GGAGCATAATACTCTGAATC+CGG 0.514528 8_4:+4897305 Msa1308620:CDS
CTTTCCACTGATGCTTGACA+CGG 0.517994 8_4:-4897105 None:intergenic
AAGAAAACGACGCCATCGAA+AGG 0.519472 8_4:+4897153 Msa1308620:CDS
GGTTCATGTTCTCGTGGCGG+CGG 0.521880 8_4:+4897176 Msa1308620:CDS
CTAGAGCGAATACTCATGGC+CGG 0.525974 8_4:-4907831 None:intergenic
GGCGGAGGTTGTGGTGGCGA+CGG 0.538876 8_4:+4897215 Msa1308620:CDS
GGATAGACATTGCCGCCCAA+GGG 0.539061 8_4:-4907798 None:intergenic
GCCGCATTCGACGATGAAAA+CGG 0.539309 8_4:+4897062 Msa1308620:CDS
GGAAAGAGAAGTGAAAGAGA+AGG 0.546218 8_4:+4897122 Msa1308620:CDS
ACTACCATCCATGGCGGCGA+CGG 0.547385 8_4:+4897037 Msa1308620:CDS
CGTTGAACACTTGGGCCTGA+CGG 0.547799 8_4:-4907760 None:intergenic
AGCAGCAACAGCTGCTGATG+AGG 0.550704 8_4:-4907716 None:intergenic
CAACACTCCACTACCATCCA+TGG 0.551656 8_4:+4897028 Msa1308620:CDS
CGAATACTCATGGCCGGGAA+CGG 0.557442 8_4:-4907825 None:intergenic
TCAGAAACAAAAGCAAGCAT+TGG 0.557840 8_4:+4906804 Msa1308620:intron
GTCGCCGCCATGGATGGTAG+TGG 0.558543 8_4:-4897035 None:intergenic
CTCTAACTGATGAGAATAGG+AGG 0.563512 8_4:+4907571 Msa1308620:CDS
TGACGGATTGGCTGAAGCAG+AGG 0.566034 8_4:-4907743 None:intergenic
GGGCACATTGTAAGAGTGGT+GGG 0.573198 8_4:-4907658 None:intergenic
CAAGTTGAAGCAAACTGAAG+TGG 0.573772 8_4:+4907518 Msa1308620:CDS
GACGGATTGGCTGAAGCAGA+GGG 0.573782 8_4:-4907742 None:intergenic
GAAAACGACGCCATCGAAAG+GGG 0.576734 8_4:+4897155 Msa1308620:CDS
AACGCCTGTCACCCCTTGGG+CGG 0.579642 8_4:+4907786 Msa1308620:CDS
TAGAGCGAATACTCATGGCC+GGG 0.580639 8_4:-4907830 None:intergenic
CGAAGGGCACATTGTAAGAG+TGG 0.588926 8_4:-4907662 None:intergenic
TTGTTGGAAGAAACTTTCAA+AGG 0.589944 8_4:+4897284 Msa1308620:CDS
ACATTGTAAGAGTGGTGGGA+GGG 0.595529 8_4:-4907654 None:intergenic
AGAACATGAACCCCTTTCGA+TGG 0.596466 8_4:-4897165 None:intergenic
ACGGCGACACGCTCGCACGA+AGG 0.599222 8_4:-4907679 None:intergenic
AGCCAAGACAAGTGGAGGTG+TGG 0.599876 8_4:+4906845 Msa1308620:CDS
GCGTTGGCCGTTGAACACTT+GGG 0.601638 8_4:-4907768 None:intergenic
AGCACCGTGTCAAGCATCAG+TGG 0.602338 8_4:+4897101 Msa1308620:CDS
AGGGCACATTGTAAGAGTGG+TGG 0.603305 8_4:-4907659 None:intergenic
CGTCAGGCCCAAGTGTTCAA+CGG 0.605304 8_4:+4907761 Msa1308620:CDS
CACATTGTAAGAGTGGTGGG+AGG 0.613092 8_4:-4907655 None:intergenic
GAATCTGAAGCCAAGACAAG+TGG 0.625066 8_4:+4906837 Msa1308620:CDS
AGTGATGATGATGACGGCGG+AGG 0.634764 8_4:+4897200 Msa1308620:CDS
TCTGAAGCCAAGACAAGTGG+AGG 0.635230 8_4:+4906840 Msa1308620:CDS
GATGACGGCGGAGGTTGTGG+TGG 0.636974 8_4:+4897209 Msa1308620:CDS
GAAAGGGGTTCATGTTCTCG+TGG 0.644860 8_4:+4897170 Msa1308620:CDS
GATAGACATTGCCGCCCAAG+GGG 0.655135 8_4:-4907797 None:intergenic
ATTCGTCGAGGAAGAAGCTG+AGG 0.662832 8_4:+4897240 Msa1308620:CDS
GGTTTCAAAACAGAAGAGCA+AGG 0.676969 8_4:+4906866 Msa1308620:CDS
GTGGCGACGGTGATTCGTCG+AGG 0.679017 8_4:+4897228 Msa1308620:CDS
AGGGGTTCATGTTCTCGTGG+CGG 0.683111 8_4:+4897173 Msa1308620:CDS
GGATTGGCTGAAGCAGAGGG+AGG 0.686007 8_4:-4907739 None:intergenic
TGAGGACGATGCAGATGACA+CGG 0.688825 8_4:-4907698 None:intergenic
GGCGGAAGTGATGATGATGA+CGG 0.703380 8_4:+4897194 Msa1308620:CDS
TGGATGGTAGTGGAGTGTTG+CGG 0.703846 8_4:-4897025 None:intergenic
CACTCCACTACCATCCATGG+CGG 0.704044 8_4:+4897031 Msa1308620:CDS
GGAAGTGATGATGATGACGG+CGG 0.716365 8_4:+4897197 Msa1308620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAAATAAAAAA+TGG - chr8_4:4896660-4896679 None:intergenic 0.0%
!!! AATTGTCAAATAATTTTTTT+CGG - chr8_4:4896368-4896387 None:intergenic 10.0%
!! TAATACATATACTAAAATAT+GGG - chr8_4:4899485-4899504 None:intergenic 10.0%
!! ATAATACATATACTAAAATA+TGG - chr8_4:4899486-4899505 None:intergenic 10.0%
!!! TAATTTACTCTATTTTATAT+TGG - chr8_4:4899889-4899908 None:intergenic 10.0%
!! AGAAATAAAAAAAATATTGA+GGG - chr8_4:4900095-4900114 None:intergenic 10.0%
!! TAGAAATAAAAAAAATATTG+AGG - chr8_4:4900096-4900115 None:intergenic 10.0%
!!! TTTCTTTATAATTTTTTTGA+AGG - chr8_4:4900420-4900439 None:intergenic 10.0%
!!! ATGATTTTTTTTTTCTTAAA+TGG + chr8_4:4900439-4900458 Msa1308620:intron 10.0%
!! TTTGGATAAAAAAAAAAAAT+TGG + chr8_4:4900761-4900780 Msa1308620:intron 10.0%
!!! CTATTTGTTTTTTTTTTTTT+TGG - chr8_4:4901953-4901972 None:intergenic 10.0%
!! ATTAAAGTAAAAAATAACAA+TGG + chr8_4:4902905-4902924 Msa1308620:intron 10.0%
!! AAAAATATTTAACATTCTTA+TGG - chr8_4:4903629-4903648 Msa1308630:intron 10.0%
!! TCAATTATAAACGATATTTA+AGG - chr8_4:4896865-4896884 None:intergenic 15.0%
!!! ATGTTTTTATTATTGTTTTG+AGG + chr8_4:4897450-4897469 Msa1308620:intron 15.0%
!!! TTTTTTTTGTTGAGTTATTA+AGG + chr8_4:4897502-4897521 Msa1308620:intron 15.0%
!!! TCTTATTTTTTGAGTAATTA+AGG + chr8_4:4897528-4897547 Msa1308620:intron 15.0%
!!! ACTGCTTTTTTTTTTTTTTT+TGG - chr8_4:4897647-4897666 None:intergenic 15.0%
!!! AAACTGCTTTTTTTTTTTTT+TGG - chr8_4:4897649-4897668 None:intergenic 15.0%
!!! AAAACTGCTTTTTTTTTTTT+TGG - chr8_4:4897650-4897669 None:intergenic 15.0%
!!! TAAAACTGCTTTTTTTTTTT+TGG - chr8_4:4897651-4897670 None:intergenic 15.0%
!!! TAAAACTGCTTTTTTTTTTT+TGG - chr8_4:4897651-4897670 None:intergenic 15.0%
!!! TTGACAGTATAAATTTTATA+TGG + chr8_4:4898513-4898532 Msa1308620:intron 15.0%
!!! GTTTTTTTAATAATGTTTGT+GGG - chr8_4:4899421-4899440 None:intergenic 15.0%
!!! AGTTTTTTTAATAATGTTTG+TGG - chr8_4:4899422-4899441 None:intergenic 15.0%
!! ACATTTACTTTATTGATATA+TGG + chr8_4:4899560-4899579 Msa1308620:intron 15.0%
!!! TAGTGATATATTTTCTTAAA+TGG + chr8_4:4899651-4899670 Msa1308620:intron 15.0%
!!! GTTGTTTCATATTTTATTAT+AGG - chr8_4:4900252-4900271 None:intergenic 15.0%
!!! TTTTTATCCAAATATTTGTT+AGG - chr8_4:4900753-4900772 None:intergenic 15.0%
!!! TTAGTTAAACTTGAAATTTT+AGG + chr8_4:4901339-4901358 Msa1308620:intron 15.0%
!! ATGAATTAGATAAACATATT+TGG + chr8_4:4901588-4901607 Msa1308620:intron 15.0%
!! TTAATATAAAATGTCAAAAG+AGG + chr8_4:4902272-4902291 Msa1308620:intron 15.0%
!!! ATACTTTTCATTTAAAAACT+TGG + chr8_4:4903084-4903103 Msa1308620:intron 15.0%
!!! TTTGCTTATTTTTATAAACA+TGG - chr8_4:4903281-4903300 Msa1308630:intron 15.0%
!! AGAATAAAAAAAATCAATTG+AGG + chr8_4:4903753-4903772 Msa1308620:intron 15.0%
!!! TTTTTTTCATTCCTATTTTT+TGG - chr8_4:4903900-4903919 Msa1308630:intron 15.0%
!! AAAAAATAGGAATGAAAAAA+AGG + chr8_4:4903899-4903918 Msa1308620:intron 15.0%
!!! CACATAAAAGTATATAAAAA+AGG + chr8_4:4904477-4904496 Msa1308620:intron 15.0%
!!! TATTTTCTTTTTACTTTTCT+GGG - chr8_4:4904598-4904617 Msa1308630:intron 15.0%
!!! TTATTTTCTTTTTACTTTTC+TGG - chr8_4:4904599-4904618 Msa1308630:intron 15.0%
!!! CAATAATATATTTTTTTGAG+AGG + chr8_4:4905463-4905482 Msa1308620:intron 15.0%
!!! TGAAAAATATTATATTTTGC+AGG - chr8_4:4905881-4905900 None:intergenic 15.0%
!!! AATAAAAATGAATGATGTTT+TGG + chr8_4:4906357-4906376 Msa1308620:intron 15.0%
!!! TTATTATAATCTTTTGATGA+TGG + chr8_4:4907270-4907289 Msa1308620:intron 15.0%
!!! ATTTTTTTCGGTTTTATGTT+TGG - chr8_4:4896356-4896375 None:intergenic 20.0%
!!! CAATTTTTCGATTTTATGTT+TGG + chr8_4:4896383-4896402 Msa1308620:intron 20.0%
!! AAAAAAACATACCATGAAAA+TGG - chr8_4:4896453-4896472 None:intergenic 20.0%
!! AAAATTAACAATGCATTTAG+AGG - chr8_4:4896523-4896542 None:intergenic 20.0%
!!! ATTTCTCTTCACATTTTTTA+GGG + chr8_4:4896568-4896587 Msa1308620:intron 20.0%
!! TTATACCAAAAATGAGAAAT+GGG - chr8_4:4896606-4896625 None:intergenic 20.0%
!! TCATTATATGTATGATTCAA+GGG - chr8_4:4896629-4896648 None:intergenic 20.0%
!! TTCATTATATGTATGATTCA+AGG - chr8_4:4896630-4896649 None:intergenic 20.0%
!!! ATTTCTGTAATTTAGTTTCA+TGG + chr8_4:4897346-4897365 Msa1308620:intron 20.0%
!!! TTTCTGTAATTTAGTTTCAT+GGG + chr8_4:4897347-4897366 Msa1308620:intron 20.0%
!!! TATATTTGGAAGTGTAAATT+TGG + chr8_4:4897407-4897426 Msa1308620:intron 20.0%
!! ATAATTGTTAGATTGTTAAG+TGG + chr8_4:4898302-4898321 Msa1308620:intron 20.0%
!! CCAAACTATTTACATAAAAT+TGG - chr8_4:4898349-4898368 None:intergenic 20.0%
!!! CCAATTTTATGTAAATAGTT+TGG + chr8_4:4898346-4898365 Msa1308620:intron 20.0%
!! ATATCTATACATTAGATTAG+TGG + chr8_4:4898702-4898721 Msa1308620:intron 20.0%
!! ATATCTATACATTAGATTAG+TGG + chr8_4:4898702-4898721 Msa1308620:intron 20.0%
!!! AGAGTTTATAATTTGTTACA+CGG - chr8_4:4898986-4899005 None:intergenic 20.0%
!!! ATAAACTCTTTCGATAATTT+TGG + chr8_4:4898997-4899016 Msa1308620:intron 20.0%
!! AAGAATGTATAATTGTTACA+CGG - chr8_4:4899236-4899255 None:intergenic 20.0%
!! TGTAACAATTATACATTCTT+TGG + chr8_4:4899236-4899255 Msa1308620:intron 20.0%
!!! ATACATTCTTTGGATAATTT+TGG + chr8_4:4899246-4899265 Msa1308620:intron 20.0%
!! GATAAATATTGAACAAATAC+GGG - chr8_4:4899463-4899482 None:intergenic 20.0%
!! GGATAAATATTGAACAAATA+CGG - chr8_4:4899464-4899483 None:intergenic 20.0%
!! ACTATACATCAAGAAAATAT+GGG - chr8_4:4899530-4899549 None:intergenic 20.0%
!! AACTATACATCAAGAAAATA+TGG - chr8_4:4899531-4899550 None:intergenic 20.0%
!! ATCAATAAAGTAAATGTGAA+TGG - chr8_4:4899557-4899576 None:intergenic 20.0%
!! AGAAAATATATCACTATATG+AGG - chr8_4:4899647-4899666 None:intergenic 20.0%
!! AAATAGTAGATGAGAAAAAT+TGG - chr8_4:4899846-4899865 None:intergenic 20.0%
!!! TTACTCTATTTTATATTGGA+TGG - chr8_4:4899885-4899904 None:intergenic 20.0%
!!! TGTATATTTTAACATAAGAG+TGG - chr8_4:4899957-4899976 None:intergenic 20.0%
!!! TAATATGTTTTGAATAAGAG+GGG - chr8_4:4899992-4900011 None:intergenic 20.0%
!!! CTAATATGTTTTGAATAAGA+GGG - chr8_4:4899993-4900012 None:intergenic 20.0%
!!! TCTAATATGTTTTGAATAAG+AGG - chr8_4:4899994-4900013 None:intergenic 20.0%
!!! AGTGTGTTAGATATTTTTTA+TGG - chr8_4:4900128-4900147 None:intergenic 20.0%
!! AAAAAATATCTAACACACTT+TGG + chr8_4:4900129-4900148 Msa1308620:intron 20.0%
!! TTACTAAAGACAATAAATCA+TGG + chr8_4:4900299-4900318 Msa1308620:intron 20.0%
!! AGTGCATATTTAATTATGAA+CGG + chr8_4:4900506-4900525 Msa1308620:intron 20.0%
!!! AAATAGGTTTACTTTCTTTT+AGG + chr8_4:4900633-4900652 Msa1308620:intron 20.0%
!!! TTCTTTTAGGAAAACAAATA+AGG + chr8_4:4900646-4900665 Msa1308620:intron 20.0%
!!! GCATAATGTTAATTTTTATG+TGG + chr8_4:4900870-4900889 Msa1308620:intron 20.0%
!! AATTTATCTAAGTATGTGTT+TGG - chr8_4:4902031-4902050 None:intergenic 20.0%
!! AAACATCAGCAATAATATAT+TGG + chr8_4:4902348-4902367 Msa1308620:intron 20.0%
!!! ATATATTGGCTTATTAAATG+TGG + chr8_4:4902362-4902381 Msa1308620:intron 20.0%
!! CAATAATCATTAAAAGGATT+AGG - chr8_4:4902520-4902539 None:intergenic 20.0%
!! TGTGTTCAATAATCATTAAA+AGG - chr8_4:4902526-4902545 None:intergenic 20.0%
!! GTTTATAATCAAACAGAATT+TGG + chr8_4:4902552-4902571 Msa1308620:intron 20.0%
!! AGTAGAAACTAAAATAAAAC+AGG + chr8_4:4903026-4903045 Msa1308620:intron 20.0%
!!! AACATTTTTTGAATTTGACT+TGG - chr8_4:4903480-4903499 Msa1308630:intron 20.0%
!! AAAATCGATAAACAGAAAAA+TGG + chr8_4:4903536-4903555 Msa1308620:intron 20.0%
!! AAATTTACAATGTAATCTTG+TGG - chr8_4:4903568-4903587 Msa1308630:intron 20.0%
!!! TATTGGTGTTTCTATTTTTT+GGG - chr8_4:4904438-4904457 Msa1308630:intron 20.0%
!!! TTATTGGTGTTTCTATTTTT+TGG - chr8_4:4904439-4904458 Msa1308630:intron 20.0%
!! TTATGTGTTTATATGTACTT+GGG - chr8_4:4904464-4904483 Msa1308630:intron 20.0%
!! TTTATGTGTTTATATGTACT+TGG - chr8_4:4904465-4904484 Msa1308630:intron 20.0%
!!! TGTTGTTTTTCCTTATTTTA+GGG - chr8_4:4904738-4904757 Msa1308630:intron 20.0%
!!! TTGTTGTTTTTCCTTATTTT+AGG - chr8_4:4904739-4904758 Msa1308630:intron 20.0%
!! GATCCATATACAATTAAATT+CGG - chr8_4:4904956-4904975 Msa1308630:intron 20.0%
!! AAATTAAAAACAAACTAACG+TGG + chr8_4:4905313-4905332 Msa1308620:intron 20.0%
!! AATTAAAAACAAACTAACGT+GGG + chr8_4:4905314-4905333 Msa1308620:intron 20.0%
!! AAATTCAAATTTAATGAGTG+TGG + chr8_4:4905395-4905414 Msa1308620:intron 20.0%
!!! TAATATATTTTTTTGAGAGG+AGG + chr8_4:4905466-4905485 Msa1308620:intron 20.0%
!!! AATATATTTTTTTGAGAGGA+GGG + chr8_4:4905467-4905486 Msa1308620:intron 20.0%
!! TTAGGATTAGATATAAAGAT+GGG + chr8_4:4905554-4905573 Msa1308620:intron 20.0%
!!! AATGAACAACTTGTTTTTAT+AGG + chr8_4:4905945-4905964 Msa1308620:intron 20.0%
!!! CTTACCAATATATTTTTTCT+TGG + chr8_4:4906125-4906144 Msa1308620:intron 20.0%
!! TTACAAAAGATCTACAAATA+TGG - chr8_4:4906274-4906293 None:intergenic 20.0%
!! GAGTTAATGATAAAATGTTA+TGG + chr8_4:4906439-4906458 Msa1308620:intron 20.0%
!! ATTATAAAGAAAAAGAAGAG+AGG + chr8_4:4906471-4906490 Msa1308620:intron 20.0%
!! TTATAAAGAAAAAGAAGAGA+GGG + chr8_4:4906472-4906491 Msa1308620:intron 20.0%
!!! GAATTTGAAATTCAATCAAA+AGG + chr8_4:4906517-4906536 Msa1308620:intron 20.0%
!! TAAAGTTGAATTTGTAAAAG+AGG + chr8_4:4906542-4906561 Msa1308620:intron 20.0%
!! AAAGTTGAATTTGTAAAAGA+GGG + chr8_4:4906543-4906562 Msa1308620:intron 20.0%
!!! AAAGCAAAATCAATTTTCTA+AGG - chr8_4:4906603-4906622 None:intergenic 20.0%
!! AGTAAAAAAAGTTAGAGAAA+AGG + chr8_4:4906738-4906757 Msa1308620:intron 20.0%
!!! AAAGGACAGTTAAATAATTT+TGG + chr8_4:4906756-4906775 Msa1308620:intron 20.0%
!! TATGAGATGAGTAAAAATTT+AGG + chr8_4:4907171-4907190 Msa1308620:intron 20.0%
! AAAATGGAACAAGTTATTGA+AGG - chr8_4:4896437-4896456 None:intergenic 25.0%
!!! AATAACTTGTTCCATTTTCA+TGG + chr8_4:4896439-4896458 Msa1308620:intron 25.0%
! AAAGATTGAAGAGAGAATTT+AGG - chr8_4:4896484-4896503 None:intergenic 25.0%
! TTAGAGGAATTAAAAATGGA+AGG - chr8_4:4896507-4896526 None:intergenic 25.0%
! GCATTTAGAGGAATTAAAAA+TGG - chr8_4:4896511-4896530 None:intergenic 25.0%
! TGTGAAGAGAAATCAAAAAT+GGG - chr8_4:4896561-4896580 None:intergenic 25.0%
! ATGTGAAGAGAAATCAAAAA+TGG - chr8_4:4896562-4896581 None:intergenic 25.0%
!!! GATTTCTCTTCACATTTTTT+AGG + chr8_4:4896567-4896586 Msa1308620:intron 25.0%
! GTTATACCAAAAATGAGAAA+TGG - chr8_4:4896607-4896626 None:intergenic 25.0%
! TCAAAGGAATCAAAGAAAAT+GGG - chr8_4:4896737-4896756 None:intergenic 25.0%
! ATCAAAGGAATCAAAGAAAA+TGG - chr8_4:4896738-4896757 None:intergenic 25.0%
!! TCAAAACAAACCAAAGTATT+AGG + chr8_4:4898633-4898652 Msa1308620:intron 25.0%
! TTAGGACAATACTATAACTT+TGG + chr8_4:4898656-4898675 Msa1308620:intron 25.0%
! ATTAGATTAGTGGTCAAATT+GGG + chr8_4:4898712-4898731 Msa1308620:intron 25.0%
!! AAGAGTGTATAATTGTTACA+CGG - chr8_4:4898740-4898759 None:intergenic 25.0%
! TGTAACAATTATACACTCTT+TGG + chr8_4:4898740-4898759 Msa1308620:intron 25.0%
!! ATACACTCTTTGGATAATTT+TGG + chr8_4:4898750-4898769 Msa1308620:intron 25.0%
! ATTGTCATAACCTAATACTT+TGG - chr8_4:4898894-4898913 None:intergenic 25.0%
! TTATGACAATACGATAACTT+TGG + chr8_4:4898904-4898923 Msa1308620:intron 25.0%
! ATTAGATTAGTGGTGAAATT+GGG + chr8_4:4898958-4898977 Msa1308620:intron 25.0%
!!! GAGTTTATAATTTGTTACAC+GGG - chr8_4:4898985-4899004 None:intergenic 25.0%
!! TCAAAGTAAACCAAAGTATT+AGG + chr8_4:4899131-4899150 Msa1308620:intron 25.0%
! ATTGTCATAACCTAATACTT+TGG - chr8_4:4898894-4898913 None:intergenic 25.0%
! AGAATGTATAATTGTTACAC+GGG - chr8_4:4899235-4899254 None:intergenic 25.0%
!!! TTGGTAGTGAAAATTTCATA+TGG + chr8_4:4899265-4899284 Msa1308620:intron 25.0%
! TTCAGTTTACTTTGTTAACT+CGG - chr8_4:4899372-4899391 None:intergenic 25.0%
!!! TGTAGATTTTAACATAAGAG+GGG - chr8_4:4900065-4900084 None:intergenic 25.0%
!!! GTGTAGATTTTAACATAAGA+GGG - chr8_4:4900066-4900085 None:intergenic 25.0%
!!! AGTGTAGATTTTAACATAAG+AGG - chr8_4:4900067-4900086 None:intergenic 25.0%
!! AACCCAATTCTAAATTTTAG+TGG + chr8_4:4900699-4900718 Msa1308620:intron 25.0%
!! CTCCACTAAAATTTAGAATT+GGG - chr8_4:4900704-4900723 None:intergenic 25.0%
!! TCTCCACTAAAATTTAGAAT+TGG - chr8_4:4900705-4900724 None:intergenic 25.0%
!!! ATTCTAAATTTTAGTGGAGA+AGG + chr8_4:4900705-4900724 Msa1308620:intron 25.0%
!! TCTAAAGCCTAACAAATATT+TGG + chr8_4:4900743-4900762 Msa1308620:intron 25.0%
! GTAAAATATAAACTGATGAG+TGG + chr8_4:4900842-4900861 Msa1308620:intron 25.0%
! TAGTAGGAAACAAAGTTAAT+TGG + chr8_4:4901051-4901070 Msa1308620:intron 25.0%
! TTTGATTGAAAGGTGAATTT+GGG - chr8_4:4901128-4901147 None:intergenic 25.0%
! ATTTGATTGAAAGGTGAATT+TGG - chr8_4:4901129-4901148 None:intergenic 25.0%
!! AAACTTTGAAGAAGACATAA+AGG + chr8_4:4901245-4901264 Msa1308620:intron 25.0%
! ATTAAATTCAAGCCTAAGAA+AGG - chr8_4:4901320-4901339 None:intergenic 25.0%
! ATGTTGAAATTAGATAGTGA+TGG + chr8_4:4901392-4901411 Msa1308620:intron 25.0%
! TGTTGAAATTAGATAGTGAT+GGG + chr8_4:4901393-4901412 Msa1308620:intron 25.0%
! AGTCAAACTAACATATATAG+GGG - chr8_4:4901567-4901586 None:intergenic 25.0%
! GAGTCAAACTAACATATATA+GGG - chr8_4:4901568-4901587 None:intergenic 25.0%
! TGAGTCAAACTAACATATAT+AGG - chr8_4:4901569-4901588 None:intergenic 25.0%
! AGACAAATATAAAAGGTTCA+AGG - chr8_4:4901631-4901650 None:intergenic 25.0%
! GAATCAGAGACAAATATAAA+AGG - chr8_4:4901638-4901657 None:intergenic 25.0%
! TATCTAAAAGTTAGTGTGTA+CGG - chr8_4:4901791-4901810 None:intergenic 25.0%
! TGAGAACTTTATGTAGAAAT+TGG + chr8_4:4902213-4902232 Msa1308620:intron 25.0%
! GTTGATATATCAAGTCTATT+TGG - chr8_4:4902327-4902346 None:intergenic 25.0%
!! TATTGTGCTCATAAATTTTG+TGG + chr8_4:4902431-4902450 Msa1308620:intron 25.0%
!! CATAAATTTTGTGGTTTCTA+AGG + chr8_4:4902440-4902459 Msa1308620:intron 25.0%
! TTAATATTACTAAGTGCTTG+AGG - chr8_4:4902689-4902708 None:intergenic 25.0%
! AGAGTAATCAATATCACTAA+TGG + chr8_4:4902976-4902995 Msa1308620:intron 25.0%
! ACATATTCAAACTGGAAAAA+TGG + chr8_4:4903661-4903680 Msa1308620:intron 25.0%
!! ATTTCAAAGAATATGCCTTT+TGG + chr8_4:4903707-4903726 Msa1308620:intron 25.0%
!!! TTTTTTTGTTCCATACCAAA+AGG - chr8_4:4903779-4903798 Msa1308630:intron 25.0%
!!! TCTACTTTCTTCTTCTTTTT+TGG - chr8_4:4903794-4903813 Msa1308630:intron 25.0%
! AATAGGAATGAAAAAAAGGA+TGG + chr8_4:4903903-4903922 Msa1308620:intron 25.0%
!!! AGTTTGAGGGTTTTTTTATA+GGG - chr8_4:4904040-4904059 Msa1308630:intron 25.0%
! TATATGTACTTGGGATTTAT+TGG - chr8_4:4904455-4904474 Msa1308630:intron 25.0%
! TTAATTGCGTTAACTTTAAC+AGG - chr8_4:4904785-4904804 Msa1308630:intron 25.0%
! GAAAAAGATGAAAGAAATTC+TGG + chr8_4:4904823-4904842 Msa1308620:intron 25.0%
! TGACCGAATTTAATTGTATA+TGG + chr8_4:4904950-4904969 Msa1308620:intron 25.0%
! CATCTTTATATCTAATCCTA+AGG - chr8_4:4905555-4905574 Msa1308630:five_prime_UTR 25.0%
! CTTAGGATTAGATATAAAGA+TGG + chr8_4:4905553-4905572 Msa1308620:intron 25.0%
! TTATGTTCTGCTTAGTATAT+AGG + chr8_4:4905621-4905640 Msa1308620:intron 25.0%
! TATGTTCTGCTTAGTATATA+GGG + chr8_4:4905622-4905641 Msa1308620:intron 25.0%
! TAGTATATAGGGAAAATAAG+TGG + chr8_4:4905633-4905652 Msa1308620:intron 25.0%
! AGAGGTTTATGTTAGAAAAT+TGG - chr8_4:4905704-4905723 None:intergenic 25.0%
! TAACATAAACCTCTCAATAA+AGG + chr8_4:4905710-4905729 Msa1308620:intron 25.0%
!! AAACTTCATCTACTTTCTTT+TGG + chr8_4:4905799-4905818 Msa1308620:intron 25.0%
! CTCTCCAAGAAAAAATATAT+TGG - chr8_4:4906132-4906151 None:intergenic 25.0%
! ATTATACTCATGTATTCCTA+CGG + chr8_4:4906162-4906181 Msa1308620:intron 25.0%
!!! AGATTTTGTTTATTTTCCGT+AGG - chr8_4:4906181-4906200 None:intergenic 25.0%
! ACATTCTGTCTTCAAATAAA+TGG - chr8_4:4906249-4906268 None:intergenic 25.0%
! ATCTACAAAAAGAAATATGC+AGG + chr8_4:4906302-4906321 Msa1308620:intron 25.0%
!!! CAATTTTCTAAGGCTATTTT+GGG - chr8_4:4906593-4906612 None:intergenic 25.0%
!!! TCAATTTTCTAAGGCTATTT+TGG - chr8_4:4906594-4906613 None:intergenic 25.0%
! TAATGTTAGTGTTTGTGATA+GGG + chr8_4:4906625-4906644 Msa1308620:intron 25.0%
!! TCACAATTCTTTTGTCAATT+TGG - chr8_4:4906662-4906681 None:intergenic 25.0%
! AAATTGACAAAAGAATTGTG+AGG + chr8_4:4906661-4906680 Msa1308620:intron 25.0%
! CAACTTACTAAGGTTATAAT+TGG - chr8_4:4906707-4906726 None:intergenic 25.0%
!! CACATTTTTACAACTTACTA+AGG - chr8_4:4906717-4906736 None:intergenic 25.0%
! TCTGTTTGGATCATATTAAT+TGG + chr8_4:4907040-4907059 Msa1308620:intron 25.0%
!!! ATAACATGCTTGTTACATTT+TGG - chr8_4:4907254-4907273 None:intergenic 25.0%
!!! ATAATCTTTTGATGATGGAT+TGG + chr8_4:4907275-4907294 Msa1308620:intron 25.0%
!!! TAATCTTTTGATGATGGATT+GGG + chr8_4:4907276-4907295 Msa1308620:intron 25.0%
AGTTATTGAAGGAAACTCTT+TGG - chr8_4:4896426-4896445 None:intergenic 30.0%
! TAGAACCCATTTCTCATTTT+TGG + chr8_4:4896598-4896617 Msa1308620:intron 30.0%
ACTTGAATTCATCTCATCAA+AGG - chr8_4:4896753-4896772 None:intergenic 30.0%
!!! TTGCATGTGAGTTTTTTTAG+TGG - chr8_4:4896895-4896914 None:intergenic 30.0%
!!! TTGCATGTGAGTTTTTTTAG+TGG - chr8_4:4896895-4896914 None:intergenic 30.0%
TTGTTGGAAGAAACTTTCAA+AGG + chr8_4:4897284-4897303 Msa1308620:CDS 30.0%
! GTAATTTAGTTTCATGGGAA+TGG + chr8_4:4897352-4897371 Msa1308620:intron 30.0%
! CTTATTTGGAATTTCATGAC+AGG + chr8_4:4897375-4897394 Msa1308620:intron 30.0%
GAATTTCATGACAGGATAAA+AGG + chr8_4:4897383-4897402 Msa1308620:intron 30.0%
ACAGGATAAAAGGCTATATT+TGG + chr8_4:4897393-4897412 Msa1308620:intron 30.0%
!!! ATTGTTTTGAGGTTATTCTG+AGG + chr8_4:4897461-4897480 Msa1308620:intron 30.0%
!! TATCAAAAAAAGTACTTGCG+TGG - chr8_4:4898285-4898304 None:intergenic 30.0%
AAGCGTGTATAATTGATACA+CGG - chr8_4:4898484-4898503 None:intergenic 30.0%
TGTATCAATTATACACGCTT+TGG + chr8_4:4898484-4898503 Msa1308620:intron 30.0%
!! GTTTTGATAACTCTGTTTTG+AGG - chr8_4:4898620-4898639 None:intergenic 30.0%
! ACAAACCAAAGTATTAGGTT+AGG + chr8_4:4898638-4898657 Msa1308620:intron 30.0%
ATTGTCCTAACCTAATACTT+TGG - chr8_4:4898646-4898665 None:intergenic 30.0%
CATTAGATTAGTGGTCAAAT+TGG + chr8_4:4898711-4898730 Msa1308620:intron 30.0%
AGAGTGTATAATTGTTACAC+GGG - chr8_4:4898739-4898758 None:intergenic 30.0%
!! TCTTTGGATAATTTTGGTAG+TGG + chr8_4:4898756-4898775 Msa1308620:intron 30.0%
! TCAAAGCAAACCAAAGTATT+AGG + chr8_4:4898881-4898900 Msa1308620:intron 30.0%
CATTAGATTAGTGGTGAAAT+TGG + chr8_4:4898957-4898976 Msa1308620:intron 30.0%
! AACTCTTTCGATAATTTTGG+TGG + chr8_4:4899000-4899019 Msa1308620:intron 30.0%
!! ACTTTGATAACTCAGTTTTG+AGG - chr8_4:4899118-4899137 None:intergenic 30.0%
ATTAGATCAGTGTTCAAACT+GGG + chr8_4:4899208-4899227 Msa1308620:intron 30.0%
! GTAAACTGAAGTATTATGCA+AGG + chr8_4:4899382-4899401 Msa1308620:intron 30.0%
! ACTTTGGAAAAAAATACTGC+AGG + chr8_4:4900145-4900164 Msa1308620:intron 30.0%
! GGGTTGTTACATATTTTCTA+CGG - chr8_4:4900684-4900703 None:intergenic 30.0%
TGGTCAATACAACAATCTAA+TGG + chr8_4:4900812-4900831 Msa1308620:intron 30.0%
! TTTTTATGTGGCTGTATTAG+TGG + chr8_4:4900882-4900901 Msa1308620:intron 30.0%
TGGAAGAAATAGACAAAATG+AGG + chr8_4:4900902-4900921 Msa1308620:intron 30.0%
TTGAAGATTGACAAAAATGG+AGG - chr8_4:4900987-4901006 None:intergenic 30.0%
AGCTTGAAGATTGACAAAAA+TGG - chr8_4:4900990-4901009 None:intergenic 30.0%
!! TCTTTGAAGTTGAAAGTAGT+AGG + chr8_4:4901035-4901054 Msa1308620:intron 30.0%
AAAGGTGAATTTGGGTAAAA+GGG - chr8_4:4901120-4901139 None:intergenic 30.0%
CTCAACTCAATTTGATTGAA+AGG - chr8_4:4901138-4901157 None:intergenic 30.0%
TCTATATCGAAGATAGATGT+TGG + chr8_4:4901182-4901201 Msa1308620:intron 30.0%
CTATATCGAAGATAGATGTT+GGG + chr8_4:4901183-4901202 Msa1308620:intron 30.0%
! TCCCCCTTAATTTTACTAAT+GGG + chr8_4:4901490-4901509 Msa1308620:intron 30.0%
AGCCCATTAGTAAAATTAAG+GGG - chr8_4:4901495-4901514 None:intergenic 30.0%
CAGCCCATTAGTAAAATTAA+GGG - chr8_4:4901496-4901515 None:intergenic 30.0%
TCAGCCCATTAGTAAAATTA+AGG - chr8_4:4901497-4901516 None:intergenic 30.0%
AATATAAAAGGTTCAAGGCT+AGG - chr8_4:4901626-4901645 None:intergenic 30.0%
! CAATTGATTTCCAAAAGGTT+GGG - chr8_4:4901660-4901679 None:intergenic 30.0%
GATGCTTCTTCATTTACAAT+TGG - chr8_4:4901823-4901842 None:intergenic 30.0%
TTCTCCAAATCACATCAAAA+AGG + chr8_4:4901977-4901996 Msa1308620:intron 30.0%
! TATGCCTTTTTGATGTGATT+TGG - chr8_4:4901984-4902003 None:intergenic 30.0%
! CAAAAAGGCATATAAATGTG+AGG + chr8_4:4901992-4902011 Msa1308620:intron 30.0%
CTAGTAAAACCTTCTTACAA+TGG + chr8_4:4902073-4902092 Msa1308620:intron 30.0%
GGAATTTATTATACGGTGTA+AGG - chr8_4:4902161-4902180 None:intergenic 30.0%
CACGAGTGGAATTTATTATA+CGG - chr8_4:4902168-4902187 None:intergenic 30.0%
GAACTTTATGTAGAAATTGG+TGG + chr8_4:4902216-4902235 Msa1308620:intron 30.0%
AAAGAGGTTACTAACTTCAT+TGG + chr8_4:4902288-4902307 Msa1308620:intron 30.0%
AAGAGGTTACTAACTTCATT+GGG + chr8_4:4902289-4902308 Msa1308620:intron 30.0%
AAAAGGATTAGGTATAGATG+TGG - chr8_4:4902509-4902528 None:intergenic 30.0%
CTGTTCGTATTCTTGATATA+TGG - chr8_4:4903251-4903270 Msa1308630:intron 30.0%
CATATATCAAGAATACGAAC+AGG + chr8_4:4903249-4903268 Msa1308620:intron 30.0%
!! AATGGTTATGATGGATTCTA+AGG - chr8_4:4903314-4903333 Msa1308630:CDS 30.0%
ACACTCCATATATCAAGAAT+AGG + chr8_4:4903364-4903383 Msa1308620:intron 30.0%
CTGTTCCTATTCTTGATATA+TGG - chr8_4:4903372-4903391 Msa1308630:CDS 30.0%
ATTATCACAGAGATATGTCA+CGG - chr8_4:4903447-4903466 Msa1308630:intron 30.0%
TGACATATCTCTGTGATAAT+AGG + chr8_4:4903447-4903466 Msa1308620:intron 30.0%
! TTGTGCAGCAATCTTATTTA+TGG - chr8_4:4903506-4903525 Msa1308630:intron 30.0%
! AAAAATCAATTGAGGCCTTT+TGG + chr8_4:4903761-4903780 Msa1308620:intron 30.0%
TGAGATGAACTCCAAAAAAT+AGG + chr8_4:4903886-4903905 Msa1308620:intron 30.0%
!!! GTTTGAGGGTTTTTTTATAG+GGG - chr8_4:4904039-4904058 Msa1308630:intron 30.0%
!!! CAGTTTGAGGGTTTTTTTAT+AGG - chr8_4:4904041-4904060 Msa1308630:intron 30.0%
!!! GCTTTCATTTGTTTTAGCTT+TGG - chr8_4:4904088-4904107 Msa1308630:intron 30.0%
GAATGTTTATTTAAGCACGA+CGG - chr8_4:4904148-4904167 Msa1308630:intron 30.0%
TGAAAAGTGAAATACCTAAG+AGG + chr8_4:4904619-4904638 Msa1308620:intron 30.0%
AGATCATATGTTGAAGATGA+TGG - chr8_4:4904694-4904713 Msa1308630:intron 30.0%
!!! GTTTTTCCTTATTTTAGGGA+TGG - chr8_4:4904734-4904753 Msa1308630:intron 30.0%
AAAGATGAAAGAAATTCTGG+AGG + chr8_4:4904826-4904845 Msa1308620:intron 30.0%
!! AAATTCTGGAGGACATTTTT+GGG + chr8_4:4904837-4904856 Msa1308620:intron 30.0%
GGAAGAAGAAGATAATAGTA+AGG + chr8_4:4904880-4904899 Msa1308620:intron 30.0%
AGTTTACTATCACCATTACA+TGG - chr8_4:4904998-4905017 Msa1308630:intron 30.0%
GAGTAATTCTTCTCTTGAAA+AGG - chr8_4:4905073-4905092 Msa1308630:five_prime_UTR 30.0%
GAGACAAAACAATGAAGAAA+TGG + chr8_4:4905243-4905262 Msa1308620:intron 30.0%
! ACACATAAAGTTTGCTTCTT+TGG + chr8_4:4905289-4905308 Msa1308620:intron 30.0%
ACAGAGAATAATGCACATTT+GGG + chr8_4:4905339-4905358 Msa1308620:intron 30.0%
TCAAATTTAATGAGTGTGGT+TGG + chr8_4:4905399-4905418 Msa1308620:intron 30.0%
! ATGATTCTTTTCTCCTAACT+TGG + chr8_4:4905578-4905597 Msa1308620:intron 30.0%
GATCAAAATAGAGTTGTGTA+AGG + chr8_4:4906052-4906071 Msa1308620:intron 30.0%
!! GTTTTGGTAAAGAAATATGC+AGG + chr8_4:4906373-4906392 Msa1308620:intron 30.0%
GTAATGTTAGTGTTTGTGAT+AGG + chr8_4:4906624-4906643 Msa1308620:intron 30.0%
AATGTTAGTGTTTGTGATAG+GGG + chr8_4:4906626-4906645 Msa1308620:intron 30.0%
TAATATGATCCAAACAGAGT+GGG - chr8_4:4907038-4907057 None:intergenic 30.0%
TTAATATGATCCAAACAGAG+TGG - chr8_4:4907039-4907058 None:intergenic 30.0%
GTTGTATTGTAACAAGTATG+TGG + chr8_4:4907211-4907230 Msa1308620:intron 30.0%
!! TACATTTTGGTGCATGTAAT+AGG - chr8_4:4907241-4907260 None:intergenic 30.0%
TGAAACACATACACATACAT+TGG - chr8_4:4907418-4907437 None:intergenic 30.0%
! AAATGTGATATGAGTGCTTT+TGG + chr8_4:4907478-4907497 Msa1308620:intron 30.0%
GTGGTGAACGTTCAATTATA+AGG - chr8_4:4896876-4896895 None:intergenic 35.0%
AGAAGTGAAAGAGAAGGAAA+CGG + chr8_4:4897128-4897147 Msa1308620:CDS 35.0%
TTTCATGGGAATGGCTTATT+TGG + chr8_4:4897361-4897380 Msa1308620:intron 35.0%
TCAGAAACAAAAGCAAGCAT+TGG + chr8_4:4897600-4897619 Msa1308620:intron 35.0%
TCAGAAACAAAAGCAAGCAT+TGG + chr8_4:4897600-4897619 Msa1308620:intron 35.0%
TCAGAAACAAAAGCAAGCAT+TGG + chr8_4:4897600-4897619 Msa1308620:intron 35.0%
TCAGAAACAAAAGCAAGCAT+TGG + chr8_4:4897600-4897619 Msa1308620:intron 35.0%
TCAGAAACAAAAGCAAGCAT+TGG + chr8_4:4897600-4897619 Msa1308620:intron 35.0%
! TGCAGAGTAACTAAAGTATC+AGG + chr8_4:4898393-4898412 Msa1308620:intron 35.0%
AGCGTGTATAATTGATACAC+GGG - chr8_4:4898483-4898502 None:intergenic 35.0%
GAGTGTATAATTGTTACACG+GGG - chr8_4:4898738-4898757 None:intergenic 35.0%
!! GCTTTGATAACTCAGTTTTG+AGG - chr8_4:4898868-4898887 None:intergenic 35.0%
!! TCTTTCGATAATTTTGGTGG+TGG + chr8_4:4899003-4899022 Msa1308620:intron 35.0%
CATTAGATCAGTGTTCAAAC+TGG + chr8_4:4899207-4899226 Msa1308620:intron 35.0%
!! CTTTGTTAACTCGGTTTTGA+GGG - chr8_4:4899363-4899382 None:intergenic 35.0%
! ACTTTGTTAACTCGGTTTTG+AGG - chr8_4:4899364-4899383 None:intergenic 35.0%
TTAACATAAGAGTGGAGATG+AGG - chr8_4:4899949-4899968 None:intergenic 35.0%
!! ATGTTTTGAATAAGAGGGGA+GGG - chr8_4:4899988-4900007 None:intergenic 35.0%
!! TATGTTTTGAATAAGAGGGG+AGG - chr8_4:4899989-4900008 None:intergenic 35.0%
ATGTAATTCAGGCTTCTCTT+AGG - chr8_4:4900035-4900054 None:intergenic 35.0%
TATAAACTGATGAGTGGCAA+TGG + chr8_4:4900848-4900867 Msa1308620:intron 35.0%
ACTTTCAACTTCAAAGACTG+TGG - chr8_4:4901032-4901051 None:intergenic 35.0%
AAGGTGAATTTGGGTAAAAG+GGG - chr8_4:4901119-4901138 None:intergenic 35.0%
GAAAGGTGAATTTGGGTAAA+AGG - chr8_4:4901121-4901140 None:intergenic 35.0%
! GTCCCCCTTAATTTTACTAA+TGG + chr8_4:4901489-4901508 Msa1308620:intron 35.0%
GCCCATTAGTAAAATTAAGG+GGG - chr8_4:4901494-4901513 None:intergenic 35.0%
!! CTAATGGGCTGAAATTGTTT+AGG + chr8_4:4901505-4901524 Msa1308620:intron 35.0%
! CCAATTGATTTCCAAAAGGT+TGG - chr8_4:4901661-4901680 None:intergenic 35.0%
!! CCAACCTTTTGGAAATCAAT+TGG + chr8_4:4901658-4901677 Msa1308620:intron 35.0%
! CCTTCCAATTGATTTCCAAA+AGG - chr8_4:4901665-4901684 None:intergenic 35.0%
!! CCTTTTGGAAATCAATTGGA+AGG + chr8_4:4901662-4901681 Msa1308620:intron 35.0%
TAAAAGTTAGTGTGTACGGT+TGG - chr8_4:4901787-4901806 None:intergenic 35.0%
AGCATCACTTATCCTATGTT+TGG + chr8_4:4901837-4901856 Msa1308620:intron 35.0%
! TGAATTTATGCCGTGGTTTT+CGG - chr8_4:4901888-4901907 None:intergenic 35.0%
! AGTAAGAAGTGTAAAGGTCA+TGG - chr8_4:4902109-4902128 None:intergenic 35.0%
TGACCTTTACACTTCTTACT+TGG + chr8_4:4902109-4902128 Msa1308620:intron 35.0%
! TTGCCAAGTAAGAAGTGTAA+AGG - chr8_4:4902115-4902134 None:intergenic 35.0%
! TTTATGTAGAAATTGGTGGC+AGG + chr8_4:4902220-4902239 Msa1308620:intron 35.0%
CAAGTCTATTTGGTAGAGTT+CGG - chr8_4:4902317-4902336 None:intergenic 35.0%
GGAATGCATCAACTATCAAT+AGG + chr8_4:4902383-4902402 Msa1308620:intron 35.0%
GATTAGGTATAGATGTGGTT+GGG - chr8_4:4902504-4902523 None:intergenic 35.0%
AAACAGAATTTGGACTGATG+AGG + chr8_4:4902562-4902581 Msa1308620:intron 35.0%
AACAGAATTTGGACTGATGA+GGG + chr8_4:4902563-4902582 Msa1308620:intron 35.0%
! ACGAAAGCACATAATTTCGT+TGG - chr8_4:4902600-4902619 None:intergenic 35.0%
TTTCTACTTTGTGAGCACAT+TGG - chr8_4:4903014-4903033 Msa1308630:CDS 35.0%
AGTCTTGATTCAAGTCCTTA+AGG + chr8_4:4903212-4903231 Msa1308620:intron 35.0%
GCATCTTGAAATGGTTATGA+TGG - chr8_4:4903323-4903342 Msa1308630:CDS 35.0%
!! TGGAGTGTTGTCAATAGTAA+GGG - chr8_4:4903352-4903371 Msa1308630:CDS 35.0%
!! ATGGAGTGTTGTCAATAGTA+AGG - chr8_4:4903353-4903372 Msa1308630:CDS 35.0%
CAAAAATGTCGATGACTCTA+AGG - chr8_4:4903410-4903429 Msa1308630:CDS 35.0%
GCATGTACACATATTCAAAC+TGG + chr8_4:4903653-4903672 Msa1308620:intron 35.0%
! AAAGAATATGCCTTTTGGCA+TGG + chr8_4:4903712-4903731 Msa1308620:intron 35.0%
! ATTGTTGTTGTGTTGAAAGC+AGG - chr8_4:4903982-4904001 Msa1308630:intron 35.0%
!! TGCTGTTGGCTTTGTATATT+CGG - chr8_4:4904335-4904354 Msa1308630:intron 35.0%
TTTGCTGAGTATGTATCAGT+TGG - chr8_4:4904372-4904391 Msa1308630:intron 35.0%
!!! TGGTGTTTCTATTTTTTGGG+CGG - chr8_4:4904435-4904454 Msa1308630:intron 35.0%
TATATATGCAGCCATACACA+TGG + chr8_4:4904519-4904538 Msa1308620:intron 35.0%
AGAGGGAGAAATTTGAGAAT+CGG - chr8_4:4904564-4904583 Msa1308630:intron 35.0%
!! TCTGGGTGTAGATTTTAAGA+GGG - chr8_4:4904581-4904600 Msa1308630:intron 35.0%
! TTCTGGGTGTAGATTTTAAG+AGG - chr8_4:4904582-4904601 Msa1308630:intron 35.0%
TGACATGTTTCTTTCCTCTT+AGG - chr8_4:4904636-4904655 Msa1308630:intron 35.0%
!!! TTATTTTAGGGATGGTTGTG+TGG - chr8_4:4904726-4904745 Msa1308630:intron 35.0%
ACACAACCATCCCTAAAATA+AGG + chr8_4:4904725-4904744 Msa1308620:intron 35.0%
!! GAAATTCTGGAGGACATTTT+TGG + chr8_4:4904836-4904855 Msa1308620:intron 35.0%
!! AATTCTGGAGGACATTTTTG+GGG + chr8_4:4904838-4904857 Msa1308620:intron 35.0%
AGAAGATAATAGTAAGGCAG+AGG + chr8_4:4904886-4904905 Msa1308620:intron 35.0%
! GTGGTTGTAGGTTTGAAATT+TGG - chr8_4:4905095-4905114 Msa1308630:intron 35.0%
TGATTGTGAGGAATCCTTAA+GGG - chr8_4:4905122-4905141 Msa1308630:intron 35.0%
TTGATTGTGAGGAATCCTTA+AGG - chr8_4:4905123-4905142 Msa1308630:intron 35.0%
!! GTTCAAAGCTTTTGATTGTG+AGG - chr8_4:4905134-4905153 Msa1308630:intron 35.0%
!! AATCAAAAGCTTTGAACCGA+CGG + chr8_4:4905137-4905156 Msa1308620:intron 35.0%
GATGAATGGAGTTTCTGTTA+TGG - chr8_4:4905171-4905190 Msa1308630:intron 35.0%
AACAGGAAAGGATCTAGAAA+TGG + chr8_4:4905193-4905212 Msa1308620:intron 35.0%
ACAGGAAAGGATCTAGAAAT+GGG + chr8_4:4905194-4905213 Msa1308620:intron 35.0%
GACAGAGAATAATGCACATT+TGG + chr8_4:4905338-4905357 Msa1308620:intron 35.0%
!! CATTTGGGTTTTGCAAAAAG+TGG + chr8_4:4905354-4905373 Msa1308620:intron 35.0%
!!! CATACACTGATTTTGTCAGT+GGG + chr8_4:4905435-4905454 Msa1308620:intron 35.0%
GTTGTTTGCAATAGTACCTT+AGG + chr8_4:4905536-4905555 Msa1308620:intron 35.0%
ACATGAAACTGAACCAAGTT+AGG - chr8_4:4905594-4905613 None:intergenic 35.0%
! AGGGAAAATAAGTGGTTCTA+AGG + chr8_4:4905641-4905660 Msa1308620:intron 35.0%
! TTGGTTGAAGCATGTCTTTT+TGG + chr8_4:4905818-4905837 Msa1308620:intron 35.0%
! AAAGAATTGTGAGGCATTCT+TGG + chr8_4:4906670-4906689 Msa1308620:intron 35.0%
TCAGAAACAAAAGCAAGCAT+TGG + chr8_4:4897600-4897619 Msa1308620:intron 35.0%
CAAAGTCACACAACAAACAA+TGG - chr8_4:4906976-4906995 None:intergenic 35.0%
AATATGATCCAAACAGAGTG+GGG - chr8_4:4907037-4907056 None:intergenic 35.0%
!! TTTTGGTGCATGTAATAGGT+GGG - chr8_4:4907237-4907256 None:intergenic 35.0%
!! ATTTTGGTGCATGTAATAGG+TGG - chr8_4:4907238-4907257 None:intergenic 35.0%
! TTTTTCCTTCCATGACATCA+TGG - chr8_4:4907459-4907478 None:intergenic 35.0%
AGACTCTAACTGATGAGAAT+AGG + chr8_4:4907568-4907587 Msa1308620:CDS 35.0%
TTCATTTGCATGTAGAGTTG+TGG - chr8_4:4907634-4907653 None:intergenic 35.0%
GGAAAGAGAAGTGAAAGAGA+AGG + chr8_4:4897122-4897141 Msa1308620:CDS 40.0%
GAAGGAACAGTCAATGTTGT+TGG + chr8_4:4897268-4897287 Msa1308620:intron 40.0%
GGAGCATAATACTCTGAATC+CGG + chr8_4:4897305-4897324 Msa1308620:CDS 40.0%
!! TGTTTTGAATAAGAGGGGAG+GGG - chr8_4:4899987-4900006 None:intergenic 40.0%
AATTCAGGCTTCTCTTAGGA+GGG - chr8_4:4900031-4900050 None:intergenic 40.0%
TAATTCAGGCTTCTCTTAGG+AGG - chr8_4:4900032-4900051 None:intergenic 40.0%
GGGGAAGAGAAATGTAATTC+AGG - chr8_4:4900046-4900065 None:intergenic 40.0%
GATCAATACCACCAAAGTGA+AGG + chr8_4:4900783-4900802 Msa1308620:intron 40.0%
CACTTTATCCTTCACTTTGG+TGG - chr8_4:4900794-4900813 None:intergenic 40.0%
CACCAAAGTGAAGGATAAAG+TGG + chr8_4:4900792-4900811 Msa1308620:intron 40.0%
GACCACTTTATCCTTCACTT+TGG - chr8_4:4900797-4900816 None:intergenic 40.0%
TCAATCTTCAAGCTTGCATG+TGG + chr8_4:4900996-4901015 Msa1308620:intron 40.0%
CAACTTCAAAGACTGTGGTT+GGG - chr8_4:4901027-4901046 None:intergenic 40.0%
TCAACTTCAAAGACTGTGGT+TGG - chr8_4:4901028-4901047 None:intergenic 40.0%
GAAGATTGAGGGAAAAAGAG+AGG - chr8_4:4901090-4901109 None:intergenic 40.0%
TGAATTTGGGTAAAAGGGGT+TGG - chr8_4:4901115-4901134 None:intergenic 40.0%
! GATGTTGGGTTGTTATAAGC+TGG + chr8_4:4901197-4901216 Msa1308620:intron 40.0%
TCTAGACTAACTGCATCAAG+TGG + chr8_4:4901270-4901289 Msa1308620:intron 40.0%
! TAGTGATGGGAATTCTCATG+AGG + chr8_4:4901406-4901425 Msa1308620:intron 40.0%
! TTATCCTATGTTTGGCTCAG+CGG + chr8_4:4901845-4901864 Msa1308620:intron 40.0%
! GTTTTCGGCAGATGTGAAAA+AGG - chr8_4:4901873-4901892 None:intergenic 40.0%
AGAAACGTGAATTTATGCCG+TGG - chr8_4:4901895-4901914 None:intergenic 40.0%
! TAGAAGCTGCTATTTGTAGC+TGG - chr8_4:4901925-4901944 None:intergenic 40.0%
! AAGAAGTGTAAAGGTCATGG+AGG - chr8_4:4902106-4902125 None:intergenic 40.0%
AAATTCCACTCGTGTGACTA+TGG + chr8_4:4902174-4902193 Msa1308620:intron 40.0%
ACTATCAATAGGTATGCGCA+TGG + chr8_4:4902394-4902413 Msa1308620:intron 40.0%
CTATCAATAGGTATGCGCAT+GGG + chr8_4:4902395-4902414 Msa1308620:intron 40.0%
! GGTTTCTAAGGACATTGTTG+AGG + chr8_4:4902452-4902471 Msa1308620:intron 40.0%
GGATTAGGTATAGATGTGGT+TGG - chr8_4:4902505-4902524 None:intergenic 40.0%
! GAACACTACTGTGTTACTCA+AGG - chr8_4:4902647-4902666 None:intergenic 40.0%
ACTTTGTGAGCACATTGGTA+TGG - chr8_4:4903009-4903028 Msa1308630:CDS 40.0%
GTCCTTAAGGTTGACAGATA+CGG + chr8_4:4903225-4903244 Msa1308620:intron 40.0%
GGGTAATGAGCATCTTGAAA+TGG - chr8_4:4903332-4903351 Msa1308630:CDS 40.0%
! TCGATGACTCTAAGGAAACA+TGG - chr8_4:4903402-4903421 Msa1308630:CDS 40.0%
ACAGAACTGCAAGAAAACGT+TGG + chr8_4:4903684-4903703 Msa1308620:intron 40.0%
! TCAATTGAGGCCTTTTGGTA+TGG + chr8_4:4903766-4903785 Msa1308620:intron 40.0%
TGGAGTTCATCTCACACAAA+AGG - chr8_4:4903827-4903846 Msa1308630:intron 40.0%
TGGAGTTCATCTCACACAAA+AGG - chr8_4:4903827-4903846 Msa1308630:intron 40.0%
!!! TGTTGTGCTGCTTTTGTTGT+TGG - chr8_4:4903941-4903960 Msa1308630:intron 40.0%
!!! TTTTAGTGCTGGCAGTTTGA+GGG - chr8_4:4904053-4904072 Msa1308630:intron 40.0%
!! TTCTGTTTGTTTGGTGCATG+GGG - chr8_4:4904306-4904325 Msa1308630:intron 40.0%
!! GTTCTGTTTGTTTGGTGCAT+GGG - chr8_4:4904307-4904326 Msa1308630:intron 40.0%
!! TTGGCTTTGTATATTCGGTG+GGG - chr8_4:4904330-4904349 Msa1308630:intron 40.0%
!! GTTGGCTTTGTATATTCGGT+GGG - chr8_4:4904331-4904350 Msa1308630:intron 40.0%
!! TGTTGGCTTTGTATATTCGG+TGG - chr8_4:4904332-4904351 Msa1308630:intron 40.0%
CCAGTTTGTATTGTTCTGCT+GGG - chr8_4:4904411-4904430 Msa1308630:intron 40.0%
TCCAGTTTGTATTGTTCTGC+TGG - chr8_4:4904412-4904431 Msa1308630:intron 40.0%
TGAGCTCAAATCCATGTGTA+TGG - chr8_4:4904533-4904552 Msa1308630:intron 40.0%
!! ATTCTGGAGGACATTTTTGG+GGG + chr8_4:4904839-4904858 Msa1308620:intron 40.0%
!! ACATTTTTGGGGGAAATGAG+TGG + chr8_4:4904849-4904868 Msa1308620:intron 40.0%
CATCCATCAGAACCATGTAA+TGG + chr8_4:4904983-4905002 Msa1308620:intron 40.0%
!! TCACCATTACATGGTTCTGA+TGG - chr8_4:4904989-4905008 Msa1308630:intron 40.0%
ACAGAACCATGTTTCGATTG+TGG + chr8_4:4905036-4905055 Msa1308620:intron 40.0%
TGTGTACCACAATCGAAACA+TGG - chr8_4:4905045-4905064 Msa1308630:five_prime_UTR 40.0%
GATTGTGAGGAATCCTTAAG+GGG - chr8_4:4905121-4905140 Msa1308630:intron 40.0%
!! ATCAAAAGCTTTGAACCGAC+GGG + chr8_4:4905138-4905157 Msa1308620:intron 40.0%
!!! TGTTATGGTTTTATCCCCGT+CGG - chr8_4:4905156-4905175 Msa1308630:intron 40.0%
GAAACTCCATTCATCTCAAC+AGG + chr8_4:4905176-4905195 Msa1308620:intron 40.0%
TCCATTCATCTCAACAGGAA+AGG + chr8_4:4905181-4905200 Msa1308620:intron 40.0%
TCCTTTCCTGTTGAGATGAA+TGG - chr8_4:4905185-4905204 Msa1308630:intron 40.0%
GAAAGGATCTAGAAATGGGT+TGG + chr8_4:4905198-4905217 Msa1308620:intron 40.0%
AGTGTGGTTGGAAGATGTAA+TGG + chr8_4:4905411-4905430 Msa1308620:intron 40.0%
CCACTGACAAAATCAGTGTA+TGG - chr8_4:4905437-4905456 Msa1308630:intron 40.0%
!!! CCATACACTGATTTTGTCAG+TGG + chr8_4:4905434-4905453 Msa1308620:intron 40.0%
AAGTTGTTTAGCGCCAAATG+AGG + chr8_4:4905492-4905511 Msa1308620:intron 40.0%
AACCCTAATCCTACCTCATT+TGG - chr8_4:4905508-4905527 Msa1308630:intron 40.0%
ATGAGGTAGGATTAGGGTTA+TGG + chr8_4:4905509-4905528 Msa1308620:intron 40.0%
GTAGGATTAGGGTTATGGTA+GGG + chr8_4:4905514-4905533 Msa1308620:intron 40.0%
GCTCATTGTCCTTTATTGAG+AGG - chr8_4:4905722-4905741 None:intergenic 40.0%
GGTTTCAAAACAGAAGAGCA+AGG + chr8_4:4906866-4906885 Msa1308620:CDS 40.0%
AGGTGAGGTTTCTTCTTCTT+AGG + chr8_4:4906886-4906905 Msa1308620:intron 40.0%
GGTGAGGTTTCTTCTTCTTA+GGG + chr8_4:4906887-4906906 Msa1308620:intron 40.0%
GTGAGGTTTCTTCTTCTTAG+GGG + chr8_4:4906888-4906907 Msa1308620:intron 40.0%
!!! CTTTTGATGATGGATTGGGA+AGG + chr8_4:4907280-4907299 Msa1308620:intron 40.0%
CTTTGTGTTCCATGATGTCA+TGG + chr8_4:4907447-4907466 Msa1308620:intron 40.0%
!!! GCTTTTGGTTCAATGAATGC+AGG + chr8_4:4907493-4907512 Msa1308620:intron 40.0%
! CACTTCAGTTTGCTTCAACT+TGG - chr8_4:4907520-4907539 None:intergenic 40.0%
! CAAGTTGAAGCAAACTGAAG+TGG + chr8_4:4907518-4907537 Msa1308620:CDS 40.0%
CTCTAACTGATGAGAATAGG+AGG + chr8_4:4907571-4907590 Msa1308620:CDS 40.0%
ACTGATGAGAATAGGAGGTA+AGG + chr8_4:4907576-4907595 Msa1308620:intron 40.0%
! TAAGGAAGTGCAAGAGCTTA+GGG + chr8_4:4907594-4907613 Msa1308620:intron 40.0%
!! GATCCAAAAGCACTGAAACG+AGG + chr8_4:4896982-4897001 Msa1308620:intron 45.0%
! TGACCTCGTTTCAGTGCTTT+TGG - chr8_4:4896988-4897007 None:intergenic 45.0%
! TCCGTTTTCATCGTCGAATG+CGG - chr8_4:4897066-4897085 None:intergenic 45.0%
CTTTCCACTGATGCTTGACA+CGG - chr8_4:4897108-4897127 None:intergenic 45.0%
AAGAAAACGACGCCATCGAA+AGG + chr8_4:4897153-4897172 Msa1308620:CDS 45.0%
AGAAAACGACGCCATCGAAA+GGG + chr8_4:4897154-4897173 Msa1308620:CDS 45.0%
AGAACATGAACCCCTTTCGA+TGG - chr8_4:4897168-4897187 None:intergenic 45.0%
!! ATCCGGTGAGTTTGTTGTAG+TGG + chr8_4:4897322-4897341 Msa1308620:intron 45.0%
TGCCACTACAACAAACTCAC+CGG - chr8_4:4897327-4897346 None:intergenic 45.0%
! GGAGGATTAGTGAATGACGT+TGG - chr8_4:4900969-4900988 None:intergenic 45.0%
GGTTGTTATAAGCTGGAGTG+AGG + chr8_4:4901204-4901223 Msa1308620:intron 45.0%
! TGAGGTGGGTTTCCTTTCTT+AGG + chr8_4:4901305-4901324 Msa1308620:intron 45.0%
! GTCTCTGATTCCCAACCTTT+TGG + chr8_4:4901647-4901666 Msa1308620:intron 45.0%
TGTCGCACGGGTCATATAAA+TGG + chr8_4:4901722-4901741 Msa1308620:intron 45.0%
TTCACATCTGCCGAAAACCA+CGG + chr8_4:4901875-4901894 Msa1308620:intron 45.0%
GGCATATAAATGTGAGGCAG+CGG + chr8_4:4901998-4902017 Msa1308620:intron 45.0%
GGAAGCTGTCCATTGTAAGA+AGG - chr8_4:4902085-4902104 None:intergenic 45.0%
TCGTGTGACTATGGATGTGA+AGG + chr8_4:4902183-4902202 Msa1308620:intron 45.0%
GTGACTATGGATGTGAAGGA+AGG + chr8_4:4902187-4902206 Msa1308620:intron 45.0%
TGGACAGAGTCTTGCAACAA+TGG + chr8_4:4902925-4902944 Msa1308620:intron 45.0%
TGCAAACGATCCATGCCAAA+AGG - chr8_4:4903725-4903744 Msa1308630:intron 45.0%
!!! TGTGCTGCTTTTGTTGTTGG+TGG - chr8_4:4903938-4903957 Msa1308630:intron 45.0%
TTTATAGGGGATTGCTGCAG+CGG - chr8_4:4904026-4904045 Msa1308630:intron 45.0%
!!! GTTTTAGTGCTGGCAGTTTG+AGG - chr8_4:4904054-4904073 Msa1308630:intron 45.0%
!!! GCTGTCATGTGTTTTAGTGC+TGG - chr8_4:4904064-4904083 Msa1308630:intron 45.0%
!!! CTGGGGTTTTTTGAGTTTGC+TGG - chr8_4:4904112-4904131 Msa1308630:intron 45.0%
!! ACGGTTGATTTGTTGTGCTG+GGG - chr8_4:4904129-4904148 Msa1308630:intron 45.0%
!! GACGGTTGATTTGTTGTGCT+GGG - chr8_4:4904130-4904149 Msa1308630:intron 45.0%
AAAGACAGTGAGATGAGCTC+AGG + chr8_4:4904261-4904280 Msa1308620:intron 45.0%
AGATGAGCTCAGGCTTACAA+AGG + chr8_4:4904271-4904290 Msa1308620:intron 45.0%
!! GGTTCTGTTTGTTTGGTGCA+TGG - chr8_4:4904308-4904327 Msa1308630:intron 45.0%
!! TGGCTTTGTATATTCGGTGG+GGG - chr8_4:4904329-4904348 Msa1308630:intron 45.0%
! TGCTCTCTGTTTTCTGCTGT+TGG - chr8_4:4904349-4904368 Msa1308630:intron 45.0%
CCCAGCAGAACAATACAAAC+TGG + chr8_4:4904408-4904427 Msa1308620:intron 45.0%
!! TTTTGGGGGAAATGAGTGGA+AGG + chr8_4:4904853-4904872 Msa1308620:intron 45.0%
!! TCAAAAGCTTTGAACCGACG+GGG + chr8_4:4905139-4905158 Msa1308620:intron 45.0%
TGAAGAGAGAGAGAGAGAGA+GGG + chr8_4:4905221-4905240 Msa1308620:intron 45.0%
TGTTTAGCGCCAAATGAGGT+AGG + chr8_4:4905496-4905515 Msa1308620:intron 45.0%
CGCCAAATGAGGTAGGATTA+GGG + chr8_4:4905503-4905522 Msa1308620:intron 45.0%
GGTAGGATTAGGGTTATGGT+AGG + chr8_4:4905513-4905532 Msa1308620:intron 45.0%
! GAATCTGAAGCCAAGACAAG+TGG + chr8_4:4906837-4906856 Msa1308620:CDS 45.0%
CAAAACAGAAGAGCAAGGTG+AGG + chr8_4:4906871-4906890 Msa1308620:intron 45.0%
AGTGGGGTATATAGGTATGG+TGG - chr8_4:4907021-4907040 None:intergenic 45.0%
CAGAGTGGGGTATATAGGTA+TGG - chr8_4:4907024-4907043 None:intergenic 45.0%
CCAAACAGAGTGGGGTATAT+AGG - chr8_4:4907029-4907048 None:intergenic 45.0%
CCTATATACCCCACTCTGTT+TGG + chr8_4:4907026-4907045 Msa1308620:intron 45.0%
GTGTTCCATGATGTCATGGA+AGG + chr8_4:4907451-4907470 Msa1308620:intron 45.0%
! GTAAGGAAGTGCAAGAGCTT+AGG + chr8_4:4907593-4907612 Msa1308620:intron 45.0%
! ACATTGTAAGAGTGGTGGGA+GGG - chr8_4:4907657-4907676 None:intergenic 45.0%
TGTCTATCCAAAACCGTTCC+CGG + chr8_4:4907812-4907831 Msa1308620:CDS 45.0%
!! TATTTATTTATGAATTAAAA+TGG + chr8_4:4896815-4896834 Msa1308620:intron 5.0%
!!! AATTTTATAATATTTCAAAT+AGG + chr8_4:4900617-4900636 Msa1308620:intron 5.0%
GAAACGAGGTCATTTCTCCG+CGG + chr8_4:4896996-4897015 Msa1308620:intron 50.0%
!! TGGATGGTAGTGGAGTGTTG+CGG - chr8_4:4897028-4897047 None:intergenic 50.0%
CAACACTCCACTACCATCCA+TGG + chr8_4:4897028-4897047 Msa1308620:CDS 50.0%
! GTTTTCATCGTCGAATGCGG+CGG - chr8_4:4897063-4897082 None:intergenic 50.0%
GCCGCATTCGACGATGAAAA+CGG + chr8_4:4897062-4897081 Msa1308620:CDS 50.0%
!! ATGCTTGACACGGTGCTGTT+CGG - chr8_4:4897098-4897117 None:intergenic 50.0%
GAAAACGACGCCATCGAAAG+GGG + chr8_4:4897155-4897174 Msa1308620:CDS 50.0%
GAAAGGGGTTCATGTTCTCG+TGG + chr8_4:4897170-4897189 Msa1308620:CDS 50.0%
! GGCGGAAGTGATGATGATGA+CGG + chr8_4:4897194-4897213 Msa1308620:CDS 50.0%
!! GGAAGTGATGATGATGACGG+CGG + chr8_4:4897197-4897216 Msa1308620:CDS 50.0%
ATTCGTCGAGGAAGAAGCTG+AGG + chr8_4:4897240-4897259 Msa1308620:CDS 50.0%
GAAGAAGCTGAGGTTGTCGA+AGG + chr8_4:4897250-4897269 Msa1308620:intron 50.0%
GAGATACCCGTGCTATAGCA+CGG + chr8_4:4898242-4898261 Msa1308620:intron 50.0%
AGATACCCGTGCTATAGCAC+GGG + chr8_4:4898243-4898262 Msa1308620:intron 50.0%
AGAGAGCTTCACGAGAGAGA+AGG - chr8_4:4900946-4900965 None:intergenic 50.0%
AGGGGTTGGACGAAGATTGA+GGG - chr8_4:4901101-4901120 None:intergenic 50.0%
AAGGGGTTGGACGAAGATTG+AGG - chr8_4:4901102-4901121 None:intergenic 50.0%
! AGCTGGAGTGAGGACTTGTT+AGG + chr8_4:4901214-4901233 Msa1308620:intron 50.0%
!! GCTGGAGTGAGGACTTGTTA+GGG + chr8_4:4901215-4901234 Msa1308620:intron 50.0%
CACATCCATAGTCACACGAG+TGG - chr8_4:4902182-4902201 None:intergenic 50.0%
GGACATTGTTGAGGCAGAAG+CGG + chr8_4:4902461-4902480 Msa1308620:intron 50.0%
GGCCGTATCTGTCAACCTTA+AGG - chr8_4:4903230-4903249 Msa1308630:intron 50.0%
GTTGAAAGCAGGTTGTGCAG+TGG - chr8_4:4903971-4903990 Msa1308630:intron 50.0%
!! CGACGGTTGATTTGTTGTGC+TGG - chr8_4:4904131-4904150 Msa1308630:intron 50.0%
TTAGGGATGGTTGTGTGGCT+AGG - chr8_4:4904721-4904740 Msa1308630:intron 50.0%
GGGAAATGAGTGGAAGGAGT+AGG + chr8_4:4904859-4904878 Msa1308620:intron 50.0%
GTTCTGTGCATGCTGATGGA+TGG - chr8_4:4905023-4905042 Msa1308630:five_prime_UTR 50.0%
! CATGGTTCTGTGCATGCTGA+TGG - chr8_4:4905027-4905046 Msa1308630:five_prime_UTR 50.0%
! CTTAAGGGGATGGTGGTTGT+AGG - chr8_4:4905107-4905126 Msa1308630:intron 50.0%
CTACAACCACCATCCCCTTA+AGG + chr8_4:4905105-4905124 Msa1308620:intron 50.0%
AGGAATCCTTAAGGGGATGG+TGG - chr8_4:4905114-4905133 Msa1308630:intron 50.0%
GTGAGGAATCCTTAAGGGGA+TGG - chr8_4:4905117-4905136 Msa1308630:intron 50.0%
GTGAAGAGAGAGAGAGAGAG+AGG + chr8_4:4905220-4905239 Msa1308620:intron 50.0%
GCGCCAAATGAGGTAGGATT+AGG + chr8_4:4905502-4905521 Msa1308620:intron 50.0%
! TCTGAAGCCAAGACAAGTGG+AGG + chr8_4:4906840-4906859 Msa1308620:CDS 50.0%
AACCACACCTCCACTTGTCT+TGG - chr8_4:4906850-4906869 None:intergenic 50.0%
! CACATTGTAAGAGTGGTGGG+AGG - chr8_4:4907658-4907677 None:intergenic 50.0%
GGGCACATTGTAAGAGTGGT+GGG - chr8_4:4907661-4907680 None:intergenic 50.0%
AGGGCACATTGTAAGAGTGG+TGG - chr8_4:4907662-4907681 None:intergenic 50.0%
! CGAAGGGCACATTGTAAGAG+TGG - chr8_4:4907665-4907684 None:intergenic 50.0%
TGAGGACGATGCAGATGACA+CGG - chr8_4:4907701-4907720 None:intergenic 50.0%
! GAGTGTTGCGGTCTATTCCG+CGG - chr8_4:4897016-4897035 None:intergenic 55.0%
CACTCCACTACCATCCATGG+CGG + chr8_4:4897031-4897050 Msa1308620:CDS 55.0%
AGCACCGTGTCAAGCATCAG+TGG + chr8_4:4897101-4897120 Msa1308620:CDS 55.0%
AGGGGTTCATGTTCTCGTGG+CGG + chr8_4:4897173-4897192 Msa1308620:CDS 55.0%
!! AGTGATGATGATGACGGCGG+AGG + chr8_4:4897200-4897219 Msa1308620:CDS 55.0%
TCAGGCTTCTCTTAGGAGGG+TGG - chr8_4:4900028-4900047 None:intergenic 55.0%
ATATGACCCGTGCGACAGCA+CGG - chr8_4:4901719-4901738 None:intergenic 55.0%
CGGTGGGGGTTCTGTTTGTT+TGG - chr8_4:4904315-4904334 Msa1308630:intron 55.0%
AGAGGAGAGAGAGAGAGTGG+AGG + chr8_4:4904904-4904923 Msa1308620:intron 55.0%
AGCCAAGACAAGTGGAGGTG+TGG + chr8_4:4906845-4906864 Msa1308620:CDS 55.0%
AGCAGCAACAGCTGCTGATG+AGG - chr8_4:4907719-4907738 None:intergenic 55.0%
!! GACGGATTGGCTGAAGCAGA+GGG - chr8_4:4907745-4907764 None:intergenic 55.0%
!! TGACGGATTGGCTGAAGCAG+AGG - chr8_4:4907746-4907765 None:intergenic 55.0%
TCTGCTTCAGCCAATCCGTC+AGG + chr8_4:4907745-4907764 Msa1308620:CDS 55.0%
! AACACTTGGGCCTGACGGAT+TGG - chr8_4:4907758-4907777 None:intergenic 55.0%
CGTTGAACACTTGGGCCTGA+CGG - chr8_4:4907763-4907782 None:intergenic 55.0%
CGTCAGGCCCAAGTGTTCAA+CGG + chr8_4:4907761-4907780 Msa1308620:CDS 55.0%
! GCGTTGGCCGTTGAACACTT+GGG - chr8_4:4907771-4907790 None:intergenic 55.0%
GATAGACATTGCCGCCCAAG+GGG - chr8_4:4907800-4907819 None:intergenic 55.0%
GGATAGACATTGCCGCCCAA+GGG - chr8_4:4907801-4907820 None:intergenic 55.0%
TGGATAGACATTGCCGCCCA+AGG - chr8_4:4907802-4907821 None:intergenic 55.0%
ACTACCATCCATGGCGGCGA+CGG + chr8_4:4897037-4897056 Msa1308620:CDS 60.0%
GGTTCATGTTCTCGTGGCGG+CGG + chr8_4:4897176-4897195 Msa1308620:CDS 60.0%
!! GATGATGACGGCGGAGGTTG+TGG + chr8_4:4897206-4897225 Msa1308620:CDS 60.0%
CGCTACCCGTGCTATAGCAC+GGG - chr8_4:4898251-4898270 None:intergenic 60.0%
GCGCTACCCGTGCTATAGCA+CGG - chr8_4:4898252-4898271 None:intergenic 60.0%
GTGCTATAGCACGGGTAGCG+CGG + chr8_4:4898251-4898270 Msa1308620:intron 60.0%
GCACGGGTGGAAAGGTCTAG+TGG - chr8_4:4901702-4901721 None:intergenic 60.0%
TTTCCACCCGTGCTGTCGCA+CGG + chr8_4:4901709-4901728 Msa1308620:intron 60.0%
TATGACCCGTGCGACAGCAC+GGG - chr8_4:4901718-4901737 None:intergenic 60.0%
!! GGTGCCGCTGAGCCAAACAT+AGG - chr8_4:4901852-4901871 None:intergenic 60.0%
GGCAGAGGAGAGAGAGAGAG+TGG + chr8_4:4904901-4904920 Msa1308620:intron 60.0%
!! GGATTGGCTGAAGCAGAGGG+AGG - chr8_4:4907742-4907761 None:intergenic 60.0%
!! GGCGTTGGCCGTTGAACACT+TGG - chr8_4:4907772-4907791 None:intergenic 60.0%
GTCGCCGCCATGGATGGTAG+TGG - chr8_4:4897038-4897057 None:intergenic 65.0%
! GATGACGGCGGAGGTTGTGG+TGG + chr8_4:4897209-4897228 Msa1308620:CDS 65.0%
GTGGCGACGGTGATTCGTCG+AGG + chr8_4:4897228-4897247 Msa1308620:CDS 65.0%
GTGCGACAGCACGGGTGGAA+AGG - chr8_4:4901710-4901729 None:intergenic 65.0%
TTCCACCCGTGCTGTCGCAC+GGG + chr8_4:4901710-4901729 Msa1308620:intron 65.0%
GCCAACGCCTGTCACCCCTT+GGG + chr8_4:4907783-4907802 Msa1308620:CDS 65.0%
AACGCCTGTCACCCCTTGGG+CGG + chr8_4:4907786-4907805 Msa1308620:CDS 65.0%
ATTGCCGCCCAAGGGGTGAC+AGG - chr8_4:4907793-4907812 None:intergenic 65.0%
! GGCGGAGGTTGTGGTGGCGA+CGG + chr8_4:4897215-4897234 Msa1308620:CDS 70.0%
CGGCGACACGCTCGCACGAA+GGG - chr8_4:4907681-4907700 None:intergenic 70.0%
ACGGCGACACGCTCGCACGA+AGG - chr8_4:4907682-4907701 None:intergenic 70.0%
GGCCAACGCCTGTCACCCCT+TGG + chr8_4:4907782-4907801 Msa1308620:CDS 70.0%
GCCCAAGGGGTGACAGGCGT+TGG - chr8_4:4907787-4907806 None:intergenic 70.0%
GACCCGTGCGACAGCACGGG+TGG - chr8_4:4901715-4901734 None:intergenic 75.0%
! GCGGCCGTCGCCGCCATGGA+TGG - chr8_4:4897044-4897063 None:intergenic 80.0%
! TGCGGCGGCCGTCGCCGCCA+TGG - chr8_4:4897048-4897067 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 4896298 4907840 4896298 ID=Msa1308620;Name=Msa1308620
chr8_4 mRNA 4896298 4907840 4896298 ID=Msa1308620-mRNA-1;Parent=Msa1308620;Name=Msa1308620-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.4|0.16|0.83|0|0|6|0|227
chr8_4 exon 4896298 4896304 4896298 ID=Msa1308620-mRNA-1:exon:1513;Parent=Msa1308620-mRNA-1
chr8_4 exon 4897024 4897261 4897024 ID=Msa1308620-mRNA-1:exon:1514;Parent=Msa1308620-mRNA-1
chr8_4 exon 4897272 4897326 4897272 ID=Msa1308620-mRNA-1:exon:1515;Parent=Msa1308620-mRNA-1
chr8_4 exon 4906808 4906887 4906808 ID=Msa1308620-mRNA-1:exon:1516;Parent=Msa1308620-mRNA-1
chr8_4 exon 4907515 4907592 4907515 ID=Msa1308620-mRNA-1:exon:1517;Parent=Msa1308620-mRNA-1
chr8_4 exon 4907615 4907840 4907615 ID=Msa1308620-mRNA-1:exon:1518;Parent=Msa1308620-mRNA-1
chr8_4 CDS 4896298 4896304 4896298 ID=Msa1308620-mRNA-1:cds;Parent=Msa1308620-mRNA-1
chr8_4 CDS 4897024 4897261 4897024 ID=Msa1308620-mRNA-1:cds;Parent=Msa1308620-mRNA-1
chr8_4 CDS 4897272 4897326 4897272 ID=Msa1308620-mRNA-1:cds;Parent=Msa1308620-mRNA-1
chr8_4 CDS 4906808 4906887 4906808 ID=Msa1308620-mRNA-1:cds;Parent=Msa1308620-mRNA-1
chr8_4 CDS 4907515 4907592 4907515 ID=Msa1308620-mRNA-1:cds;Parent=Msa1308620-mRNA-1
chr8_4 CDS 4907615 4907840 4907615 ID=Msa1308620-mRNA-1:cds;Parent=Msa1308620-mRNA-1
Gene Sequence

>Msa1308620

ATGAGTAACCGCAACACTCCACTACCATCCATGGCGGCGACGGCCGCCGCATTCGACGATGAAAACGGAGTTTCATCACCGAACAGCACCGTGTCAAGCATCAGTGGAAAGAGAAGTGAAAGAGAAGGAAACGGAGAAGAAAACGACGCCATCGAAAGGGGTTCATGTTCTCGTGGCGGCGGAAGTGATGATGATGACGGCGGAGGTTGTGGTGGCGACGGTGATTCGTCGAGGAAGAAGCTGAGGAACAGTCAATGTTGTTGGAAGAAACTTTCAAAGGAGCATAATACTCTGAATCCGAAACAAAAGCAAGCATTGGCAAAGCAGTTGAATCTGAAGCCAAGACAAGTGGAGGTGTGGTTTCAAAACAGAAGAGCAAGGACCAAGTTGAAGCAAACTGAAGTGGATTGTGAGTACTTGAAGAGATGCTGTGAGACTCTAACTGATGAGAATAGGAGGGCATTGAAGTTATCTCCACAACTCTACATGCAAATGAACCCTCCCACCACTCTTACAATGTGCCCTTCGTGCGAGCGTGTCGCCGTGTCATCTGCATCGTCCTCATCAGCAGCTGTTGCTGCTCCTCCCTCTGCTTCAGCCAATCCGTCAGGCCCAAGTGTTCAACGGCCAACGCCTGTCACCCCTTGGGCGGCAATGTCTATCCAAAACCGTTCCCGGCCATGA

Protein sequence

>Msa1308620

MSNRNTPLPSMAATAAAFDDENGVSSPNSTVSSISGKRSEREGNGEENDAIERGSCSRGGGSDDDDGGGCGGDGDSSRKKLRNSQCCWKKLSKEHNTLNPKQKQALAKQLNLKPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRALKLSPQLYMQMNPPTTLTMCPSCERVAVSSASSSSAAVAAPPSASANPSGPSVQRPTPVTPWAAMSIQNRSRP*