AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1380400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1380400 MtrunA17_Chr7g0267701 81.119 715 74 5 1 655 1 714 0.0 1117
Msa1380400 MtrunA17_Chr1g0176821 61.951 410 127 7 1 391 1 400 2.80e-165 486
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1380400 AT5G06440.3 53.165 316 135 3 1 315 1 304 1.10e-115 355
Msa1380400 AT5G06440.2 53.165 316 135 3 1 315 1 304 1.10e-115 355
Msa1380400 AT5G06440.4 51.393 323 137 4 1 315 1 311 1.62e-111 344
Msa1380400 AT5G06440.1 53.310 287 119 4 1 285 1 274 4.18e-103 316
Msa1380400 AT5G06440.5 59.565 230 88 2 87 315 5 230 3.62e-98 307
Msa1380400 AT5G06440.6 59.817 219 83 2 98 315 1 215 2.64e-94 296
Msa1380400 AT3G11720.1 44.411 331 152 6 1 326 1 304 3.64e-94 301
Msa1380400 AT3G11720.2 44.411 331 152 6 1 326 1 304 3.64e-94 301
Msa1380400 AT3G11720.3 44.411 331 152 6 1 326 55 358 3.55e-93 300
Msa1380400 AT3G11720.4 49.130 230 97 4 98 326 1 211 4.26e-74 245

Find 131 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGTAATTATTTGCATTT+TGG 0.137288 tig0020342:-100969 None:intergenic
AGCCACTAGTTAACTGAATT+TGG 0.156539 tig0020342:-98437 None:intergenic
ATCATATAAATAGTTGTTTA+TGG 0.158470 tig0020342:+98568 Msa1380400:five_prime_UTR
ATGCATTAGCAGAAGAAAAT+AGG 0.182295 tig0020342:+102322 Msa1380400:exon
TTCCTCTTGTTTAACTGTTT+TGG 0.197344 tig0020342:-102277 None:intergenic
ATCTTCAATATTTGCTTCTA+TGG 0.200100 tig0020342:-101430 None:intergenic
ATTCTCACCATTTCTTATAA+AGG 0.226461 tig0020342:-99462 None:intergenic
CGACAATCTCACAATTCTTT+TGG 0.239123 tig0020342:-101389 None:intergenic
AAATAATATGTCATCTAATT+AGG 0.240278 tig0020342:+98400 Msa1380400:five_prime_UTR
TTGTAGGGCAATAGGGAATT+TGG 0.245211 tig0020342:+100547 Msa1380400:intron
ACCAGTGTTGTTCCTTGTTT+GGG 0.246792 tig0020342:+102419 Msa1380400:three_prime_UTR
TTCATTTCAAGGCAACTTAT+TGG 0.246795 tig0020342:+100608 Msa1380400:CDS
ATTATTTATAGATGAGTCTT+AGG 0.257357 tig0020342:+102621 Msa1380400:three_prime_UTR
AGCTACTTAATTGTCCTAAA+AGG 0.259174 tig0020342:-98492 None:intergenic
GCCTTGAAATGAAATTTATA+AGG 0.259631 tig0020342:-100598 None:intergenic
TTCAATAAGCAATGTATTAT+AGG 0.275063 tig0020342:-99268 None:intergenic
CTCACAACACCCTTTGCTTC+AGG 0.277935 tig0020342:-100199 None:intergenic
GACCAGTGTTGTTCCTTGTT+TGG 0.289544 tig0020342:+102418 Msa1380400:three_prime_UTR
AATTATTTGTTCATCAATAT+TGG 0.293909 tig0020342:-102534 None:intergenic
TTCTCACCATTTCTTATAAA+GGG 0.318688 tig0020342:-99461 None:intergenic
CATCTGAAAGAAGTTATTTC+CGG 0.324574 tig0020342:+100260 Msa1380400:CDS
GATGTATTGCTTTCCTCAAA+TGG 0.327557 tig0020342:-101207 None:intergenic
GTGCTATTTGTTCTCCAGTC+TGG 0.329723 tig0020342:-99787 None:intergenic
CCCTTATAAATTTCATTTCA+AGG 0.335848 tig0020342:+100597 Msa1380400:CDS
GAGAACAAATAGCACTAATA+AGG 0.341307 tig0020342:+99795 Msa1380400:CDS
CTTATTGAAGGCTATGTAGA+TGG 0.348985 tig0020342:+99282 Msa1380400:CDS
GAGATTGCAGAAGCAGATAT+TGG 0.359607 tig0020342:+101282 Msa1380400:CDS
TGCATTAGCAGAAGAAAATA+GGG 0.372121 tig0020342:+102323 Msa1380400:exon
AAAATTAATGAGACTATTGA+TGG 0.372387 tig0020342:+100157 Msa1380400:CDS
AATCATCCCTTTATAAGAAA+TGG 0.382734 tig0020342:+99455 Msa1380400:CDS
TCAATAAGCAATGTATTATA+GGG 0.386854 tig0020342:-99267 None:intergenic
TCAATCTGGCTTGCTTCAAT+TGG 0.387863 tig0020342:-102166 None:intergenic
TCAATGAATATGAATCAATC+TGG 0.388850 tig0020342:-102180 None:intergenic
GCTTGTTATCAGATATTGTC+TGG 0.396019 tig0020342:-102222 None:intergenic
TATAATACATTGCTTATTGA+AGG 0.397643 tig0020342:+99270 Msa1380400:CDS
TTCACAATCAGAGATGGAAT+TGG 0.399834 tig0020342:+98768 Msa1380400:CDS
TATCAGCTCAAATGTAAAAC+AGG 0.404649 tig0020342:+101548 Msa1380400:CDS
ATTTCATCAGTTCAGAAATA+CGG 0.409322 tig0020342:+101594 Msa1380400:CDS
CCTTGAAATGAAATTTATAA+GGG 0.411284 tig0020342:-100597 None:intergenic
TTAGTCAAAGTAAGCAAGAT+TGG 0.417597 tig0020342:+100914 Msa1380400:CDS
CTTCTTTCGACAGTTAAAAC+AGG 0.422510 tig0020342:+99197 Msa1380400:intron
ACATAAATGCATGGAAAGTT+CGG 0.428283 tig0020342:-102447 None:intergenic
TTAGCACATCAAGGACTGAT+TGG 0.429890 tig0020342:+98967 Msa1380400:CDS
CTCCATGGCCACTGTCTACA+AGG 0.436068 tig0020342:+99934 Msa1380400:CDS
TGATACATCTATTGTGCTAA+AGG 0.436279 tig0020342:+101365 Msa1380400:CDS
AACTGAATTTGGACAGAGAA+AGG 0.441475 tig0020342:-98426 None:intergenic
GGGAGGTTATGTTATACAAA+AGG 0.451155 tig0020342:+100234 Msa1380400:CDS
ACTACAGGATTGATATATGT+TGG 0.455317 tig0020342:+102396 Msa1380400:three_prime_UTR
ATGAACGGCGACAAAGAATT+CGG 0.464485 tig0020342:+100769 Msa1380400:CDS
TGTGACTGACCAACATCAAC+AGG 0.471454 tig0020342:-99306 None:intergenic
TGATTCTGATTTGAGAAATC+CGG 0.472762 tig0020342:-102136 None:intergenic
AACTTTGACTTTCTGATGGA+AGG 0.473468 tig0020342:+98594 Msa1380400:five_prime_UTR
GGTACATCTGAAGACATGTC+TGG 0.473696 tig0020342:-102256 None:intergenic
GTTGTGAGAATTGATTTGTT+GGG 0.475038 tig0020342:+100214 Msa1380400:CDS
AGTACACGACATTCCATTTG+AGG 0.475441 tig0020342:+101194 Msa1380400:CDS
TGTGCAATATAGGGAGAGGT+TGG 0.477595 tig0020342:+98669 Msa1380400:CDS
AGGCTTTAGAAACATTAGAA+AGG 0.478529 tig0020342:+101568 Msa1380400:CDS
AAGCCTTGACAATTTACTAC+AGG 0.479616 tig0020342:+102381 Msa1380400:three_prime_UTR
GATACATCTATTGTGCTAAA+GGG 0.484119 tig0020342:+101366 Msa1380400:CDS
GATACATAAAGATGGACAAA+AGG 0.484559 tig0020342:+98638 Msa1380400:exon
ATCCATAGCATTTGATTCAT+CGG 0.487059 tig0020342:-100845 None:intergenic
GGCTTTAGAAACATTAGAAA+GGG 0.487114 tig0020342:+101569 Msa1380400:CDS
AGATATTGTACAAATTGAAA+AGG 0.488307 tig0020342:+101449 Msa1380400:CDS
GTATTATAGGGAGTTCCCTC+TGG 0.491261 tig0020342:-99255 None:intergenic
TGACAGCTTTATGCGTCTCA+TGG 0.495714 tig0020342:+99431 Msa1380400:intron
CTTTGACTAAGCTCTTCAGC+AGG 0.503153 tig0020342:-100901 None:intergenic
TGTTGTGAGAATTGATTTGT+TGG 0.503261 tig0020342:+100213 Msa1380400:CDS
TAGTCAAAGTAAGCAAGATT+GGG 0.503463 tig0020342:+100915 Msa1380400:CDS
TCAAGGCAACTTATTGGCAG+TGG 0.505086 tig0020342:+100614 Msa1380400:CDS
CAATATTGGTCTATGATTCA+AGG 0.505504 tig0020342:-102520 None:intergenic
GCATAACTTTGACTTTCTGA+TGG 0.505690 tig0020342:+98590 Msa1380400:five_prime_UTR
TGTTTGCAGAAGGTCCAGAC+TGG 0.509433 tig0020342:+99773 Msa1380400:CDS
AAGTAAATGACATTTCAGTC+GGG 0.509863 tig0020342:+101337 Msa1380400:CDS
GATGCAGTAACTTTGAAAGT+AGG 0.512463 tig0020342:-99746 None:intergenic
TGCATCTGATTGTTTGCAGA+AGG 0.516483 tig0020342:+99763 Msa1380400:CDS
TACCGATGAATCAAATGCTA+TGG 0.518027 tig0020342:+100843 Msa1380400:CDS
AAAGTAAATGACATTTCAGT+CGG 0.519463 tig0020342:+101336 Msa1380400:CDS
ATGAAATTTATAAGGGATGG+AGG 0.526404 tig0020342:-100590 None:intergenic
AGGGAATTTGGATATCAAGC+TGG 0.527263 tig0020342:+100559 Msa1380400:CDS
AATATTGGTCTATGATTCAA+GGG 0.538012 tig0020342:-102519 None:intergenic
TCTCTGATTGTGAAGAATGA+TGG 0.539462 tig0020342:-98759 None:intergenic
GAAATGAAATTTATAAGGGA+TGG 0.541927 tig0020342:-100593 None:intergenic
AAAAGATGTATCACCTTCCT+CGG 0.546283 tig0020342:-101067 None:intergenic
GACAGCTTTATGCGTCTCAT+GGG 0.548438 tig0020342:+99432 Msa1380400:intron
AGAGATTGTACAAATTGAGA+AGG 0.555855 tig0020342:+101161 Msa1380400:CDS
AGTGCTTCTGCAGATGAAAG+TGG 0.566002 tig0020342:+98939 Msa1380400:CDS
CATGACATTTCAACCGAGGA+AGG 0.569041 tig0020342:+101054 Msa1380400:CDS
AGAGATTGTACAAAGTGAGA+AGG 0.571592 tig0020342:+101017 Msa1380400:CDS
TCCCTTGTAGACAGTGGCCA+TGG 0.571642 tig0020342:-99936 None:intergenic
ATAATTTGTAAGATCAAATG+AGG 0.571787 tig0020342:-98704 None:intergenic
TCATTCTTCACAATCAGAGA+TGG 0.573861 tig0020342:+98762 Msa1380400:CDS
AAGAAAGGATGAAGCCTCCA+TGG 0.577075 tig0020342:+99919 Msa1380400:intron
TACCAAAACAGTTAAACAAG+AGG 0.578348 tig0020342:+102275 Msa1380400:CDS
GTCCAAATTCAGTTAACTAG+TGG 0.578614 tig0020342:+98435 Msa1380400:five_prime_UTR
ATGAGTCTTAGGAGTGTCAA+AGG 0.580107 tig0020342:+102632 Msa1380400:three_prime_UTR
TTCGGTTCATTCAGGCACAC+AGG 0.582875 tig0020342:+102070 Msa1380400:intron
TGAATCAAATGCTATGGATG+AGG 0.587498 tig0020342:+100849 Msa1380400:CDS
AGGAGCAGATCTTAGCATGA+AGG 0.589267 tig0020342:+102090 Msa1380400:CDS
ACTCACTTCACATAAATGCA+TGG 0.591522 tig0020342:-102456 None:intergenic
TGGTTTCAGACTTTATCAGA+AGG 0.594007 tig0020342:+100634 Msa1380400:CDS
GTGGAGGATTTAGCACATCA+AGG 0.603076 tig0020342:+98958 Msa1380400:CDS
GTGAGAATTGATTTGTTGGG+AGG 0.607741 tig0020342:+100217 Msa1380400:CDS
ATATTGTGCAATATAGGGAG+AGG 0.608785 tig0020342:+98665 Msa1380400:CDS
AGTTCGGAAAACCCCAAACA+AGG 0.612535 tig0020342:-102431 None:intergenic
TTCCGTGTTATGTATCGTGA+AGG 0.612823 tig0020342:+99231 Msa1380400:CDS
CTTGTAGACAGTGGCCATGG+AGG 0.613608 tig0020342:-99933 None:intergenic
TGATGTGATTCCTGAAGCAA+AGG 0.614045 tig0020342:+100189 Msa1380400:CDS
AACATACAACAAGTCAGTCA+AGG 0.623049 tig0020342:-100797 None:intergenic
AATCCTGTAGTAAATTGTCA+AGG 0.628047 tig0020342:-102384 None:intergenic
GCTGTAGCTTCTAAGATGAA+CGG 0.631947 tig0020342:+100754 Msa1380400:CDS
AAATTACAACAAAATAGCAC+CGG 0.632071 tig0020342:+102117 Msa1380400:CDS
AGTAAATGACATTTCAGTCG+GGG 0.634575 tig0020342:+101338 Msa1380400:CDS
CCAGTGTTGTTCCTTGTTTG+GGG 0.637560 tig0020342:+102420 Msa1380400:three_prime_UTR
CAATCAGAGATGGAATTGGA+AGG 0.638150 tig0020342:+98772 Msa1380400:CDS
CAAAATGCAAATAATTACAA+TGG 0.638245 tig0020342:+100970 Msa1380400:CDS
GTAGATGGACCTGTTGATGT+TGG 0.638645 tig0020342:+99297 Msa1380400:CDS
TCCATGGCCACTGTCTACAA+GGG 0.652310 tig0020342:+99935 Msa1380400:CDS
AATACGGATTTCGTTCACGC+AGG 0.658313 tig0020342:+101610 Msa1380400:CDS
ATGGCCACTGTCTACAAGGG+AGG 0.663692 tig0020342:+99938 Msa1380400:CDS
ATGTATCGTGAAGGACCAGA+GGG 0.665333 tig0020342:+99240 Msa1380400:CDS
CCCCAAACAAGGAACAACAC+TGG 0.667683 tig0020342:-102420 None:intergenic
CGGCGACAAAGAATTCGGCA+AGG 0.680174 tig0020342:+100774 Msa1380400:CDS
GATGTGATTCCTGAAGCAAA+GGG 0.685960 tig0020342:+100190 Msa1380400:CDS
TATGTATCGTGAAGGACCAG+AGG 0.688092 tig0020342:+99239 Msa1380400:CDS
ACAGCCTCCCTTGTAGACAG+TGG 0.690378 tig0020342:-99942 None:intergenic
GCTTCTGCAGATGAAAGTGG+AGG 0.692008 tig0020342:+98942 Msa1380400:CDS
AAAGTAGGAACAGTAAACTG+TGG 0.716270 tig0020342:-99731 None:intergenic
AGTGCATGACATTTCAACCG+AGG 0.717008 tig0020342:+101050 Msa1380400:CDS
GTCCTTCACGATACATAACA+CGG 0.721380 tig0020342:-99233 None:intergenic
ACAGTTAAAACAGGATAACG+AGG 0.723822 tig0020342:+99206 Msa1380400:intron
ATTGAATATGATAATATACG+AGG 0.739356 tig0020342:+101498 Msa1380400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATATCAAAATATATAATA+TGG - tig0020342:99385-99404 None:intergenic 10.0%
!! AAATAATATGTCATCTAATT+AGG + tig0020342:98400-98419 Msa1380400:five_prime_UTR 15.0%
!! ATCATATAAATAGTTGTTTA+TGG + tig0020342:98568-98587 Msa1380400:five_prime_UTR 15.0%
!! TTTATGTATCTAAAAAAAGA+AGG - tig0020342:98628-98647 None:intergenic 15.0%
!!! TTTTTTTAGATACATAAAGA+TGG + tig0020342:98630-98649 Msa1380400:exon 15.0%
!! GATAAAAATAAAACAAAACT+TGG - tig0020342:99022-99041 None:intergenic 15.0%
!!! ATTTTTCAATTAAATTCTCA+AGG + tig0020342:99157-99176 Msa1380400:intron 15.0%
!! AGAACAATTAATGAAAATTA+TGG + tig0020342:99606-99625 Msa1380400:intron 15.0%
!!! ATTTTATATCATTTGTTGAT+TGG + tig0020342:100330-100349 Msa1380400:intron 15.0%
!! TGAAACAAAATATTACTTAT+TGG - tig0020342:100474-100493 None:intergenic 15.0%
!!! ATAAGTAATATTTTGTTTCA+TGG + tig0020342:100474-100493 Msa1380400:intron 15.0%
!!! TATTTTTTGTCAAATTTTGT+AGG + tig0020342:100531-100550 Msa1380400:intron 15.0%
!!! ATTTTTTGTCAAATTTTGTA+GGG + tig0020342:100532-100551 Msa1380400:intron 15.0%
!! AATTATTTGTTCATCAATAT+TGG - tig0020342:102537-102556 None:intergenic 15.0%
!!! TATTGTCATTTAAAGAAAAA+AGG + tig0020342:102579-102598 Msa1380400:three_prime_UTR 15.0%
!!! ATTGTCATTTAAAGAAAAAA+GGG + tig0020342:102580-102599 Msa1380400:three_prime_UTR 15.0%
!!! GCTGAAAATTTTCAAATTTA+TGG + tig0020342:98457-98476 Msa1380400:five_prime_UTR 20.0%
!! GAAAAATATTGTGCAATATA+GGG + tig0020342:98660-98679 Msa1380400:CDS 20.0%
!!! ATAATTTGTAAGATCAAATG+AGG - tig0020342:98707-98726 None:intergenic 20.0%
!! TCAATAAGCAATGTATTATA+GGG - tig0020342:99270-99289 None:intergenic 20.0%
!! TTCAATAAGCAATGTATTAT+AGG - tig0020342:99271-99290 None:intergenic 20.0%
!! TATAATACATTGCTTATTGA+AGG + tig0020342:99270-99289 Msa1380400:CDS 20.0%
!! TTCGTTGTTAAACTTAAAAA+GGG - tig0020342:99360-99379 None:intergenic 20.0%
!! AGAAATGAAAATTGTGATAA+AGG - tig0020342:99704-99723 None:intergenic 20.0%
!!! TTTATGCTTAATTTTATCTC+AGG + tig0020342:100120-100139 Msa1380400:intron 20.0%
!! AAAATTAATGAGACTATTGA+TGG + tig0020342:100157-100176 Msa1380400:CDS 20.0%
!! TTAGAAATTTCTCTTTCATT+GGG + tig0020342:100376-100395 Msa1380400:intron 20.0%
!! CCTTGAAATGAAATTTATAA+GGG - tig0020342:100600-100619 None:intergenic 20.0%
!!! CATTGTAATTATTTGCATTT+TGG - tig0020342:100972-100991 None:intergenic 20.0%
!! CAAAATGCAAATAATTACAA+TGG + tig0020342:100970-100989 Msa1380400:CDS 20.0%
!!! AATACATCTTTTGTACTAAA+AGG + tig0020342:101222-101241 Msa1380400:CDS 20.0%
!! AGATATTGTACAAATTGAAA+AGG + tig0020342:101449-101468 Msa1380400:CDS 20.0%
!! ATTGAATATGATAATATACG+AGG + tig0020342:101498-101517 Msa1380400:CDS 20.0%
!! GAATAATTACAAAAATTACG+TGG + tig0020342:101923-101942 Msa1380400:intron 20.0%
!! TATTGTTACATATGATTGTT+TGG + tig0020342:101984-102003 Msa1380400:intron 20.0%
!! TATGATTGTTTGGAAATATT+AGG + tig0020342:101994-102013 Msa1380400:intron 20.0%
!!! TTGTCATTTAAAGAAAAAAG+GGG + tig0020342:102581-102600 Msa1380400:three_prime_UTR 20.0%
!! ATTATTTATAGATGAGTCTT+AGG + tig0020342:102621-102640 Msa1380400:three_prime_UTR 20.0%
! GGAAAAATATTGTGCAATAT+AGG + tig0020342:98659-98678 Msa1380400:CDS 25.0%
!!! TCTATTTCTTTTTTTGTTGC+AGG + tig0020342:98855-98874 Msa1380400:intron 25.0%
!! TCTGAAATGAAGTTATCAAT+TGG - tig0020342:99044-99063 None:intergenic 25.0%
!! ATTGATAACTTCATTTCAGA+AGG + tig0020342:99044-99063 Msa1380400:intron 25.0%
!! TTGATAACTTCATTTCAGAA+GGG + tig0020342:99045-99064 Msa1380400:intron 25.0%
! CTTCGTTGTTAAACTTAAAA+AGG - tig0020342:99361-99380 None:intergenic 25.0%
! AATCATCCCTTTATAAGAAA+TGG + tig0020342:99455-99474 Msa1380400:CDS 25.0%
! TTCTCACCATTTCTTATAAA+GGG - tig0020342:99464-99483 None:intergenic 25.0%
! ATTCTCACCATTTCTTATAA+AGG - tig0020342:99465-99484 None:intergenic 25.0%
! ACTCATGAATATCTATGTAA+GGG + tig0020342:99575-99594 Msa1380400:intron 25.0%
! GTATGCTTAATAATATCAGT+TGG - tig0020342:99642-99661 None:intergenic 25.0%
!! TATCACAATTTTCATTTCTC+AGG + tig0020342:99705-99724 Msa1380400:intron 25.0%
!! TGTTCCATATTTTGTAAGAA+AGG + tig0020342:99904-99923 Msa1380400:intron 25.0%
! TCATCCTTTCTTACAAAATA+TGG - tig0020342:99911-99930 None:intergenic 25.0%
!!! GATAGTAGTTCTTTTGAAAA+CGG + tig0020342:100004-100023 Msa1380400:CDS 25.0%
! GTTAGAAATTTCTCTTTCAT+TGG + tig0020342:100375-100394 Msa1380400:intron 25.0%
! GAAATGAAATTTATAAGGGA+TGG - tig0020342:100596-100615 None:intergenic 25.0%
! CCCTTATAAATTTCATTTCA+AGG + tig0020342:100597-100616 Msa1380400:CDS 25.0%
! GCCTTGAAATGAAATTTATA+AGG - tig0020342:100601-100620 None:intergenic 25.0%
! AAAGTAAATGACATTTCAGT+CGG + tig0020342:101336-101355 Msa1380400:CDS 25.0%
! ATCTTCAATATTTGCTTCTA+TGG - tig0020342:101433-101452 None:intergenic 25.0%
! ATTTCATCAGTTCAGAAATA+CGG + tig0020342:101594-101613 Msa1380400:CDS 25.0%
!!! TCTAAGCACTGATTATAAAT+GGG - tig0020342:101859-101878 None:intergenic 25.0%
!!! TTGACACTTTTATTTCCTTT+CGG + tig0020342:102052-102071 Msa1380400:intron 25.0%
! AAATTACAACAAAATAGCAC+CGG + tig0020342:102117-102136 Msa1380400:CDS 25.0%
! TCAATGAATATGAATCAATC+TGG - tig0020342:102183-102202 None:intergenic 25.0%
!! AATATTGGTCTATGATTCAA+GGG - tig0020342:102522-102541 None:intergenic 25.0%
AGCTACTTAATTGTCCTAAA+AGG - tig0020342:98495-98514 None:intergenic 30.0%
GATACATAAAGATGGACAAA+AGG + tig0020342:98638-98657 Msa1380400:exon 30.0%
! TATATGATTTGAGCTTGTTC+TGG + tig0020342:98797-98816 Msa1380400:intron 30.0%
AGATAAACTCATGATACTAG+TGG - tig0020342:98838-98857 None:intergenic 30.0%
!!! TTTTTTTGTTGCAGGATATG+AGG + tig0020342:98863-98882 Msa1380400:intron 30.0%
TGATAACTTCATTTCAGAAG+GGG + tig0020342:99046-99065 Msa1380400:intron 30.0%
CACTCATGAATATCTATGTA+AGG + tig0020342:99574-99593 Msa1380400:intron 30.0%
! TAATAATATCAGTTGGTGTC+TGG - tig0020342:99635-99654 None:intergenic 30.0%
GAGAACAAATAGCACTAATA+AGG + tig0020342:99795-99814 Msa1380400:CDS 30.0%
!! AAAAGTGAAGGCGTTTAATA+TGG - tig0020342:99872-99891 None:intergenic 30.0%
ATACAAGCATTCAAAAGTGA+AGG - tig0020342:99884-99903 None:intergenic 30.0%
AGAAACAGAAAAAAAGATCG+AGG - tig0020342:100036-100055 None:intergenic 30.0%
!! TGTTGTGAGAATTGATTTGT+TGG + tig0020342:100213-100232 Msa1380400:CDS 30.0%
!! GTTGTGAGAATTGATTTGTT+GGG + tig0020342:100214-100233 Msa1380400:CDS 30.0%
! CATCTGAAAGAAGTTATTTC+CGG + tig0020342:100260-100279 Msa1380400:CDS 30.0%
ACTCACTTAAAAAAACTCAC+CGG - tig0020342:100282-100301 None:intergenic 30.0%
! CCTTGGTTATTTAACTTCTT+CGG + tig0020342:100405-100424 Msa1380400:intron 30.0%
! TCAAATTTTGTAGGGCAATA+GGG + tig0020342:100540-100559 Msa1380400:intron 30.0%
ATGAAATTTATAAGGGATGG+AGG - tig0020342:100593-100612 None:intergenic 30.0%
TTCATTTCAAGGCAACTTAT+TGG + tig0020342:100608-100627 Msa1380400:CDS 30.0%
ATCCATAGCATTTGATTCAT+CGG - tig0020342:100848-100867 None:intergenic 30.0%
TTAGTCAAAGTAAGCAAGAT+TGG + tig0020342:100914-100933 Msa1380400:CDS 30.0%
TAGTCAAAGTAAGCAAGATT+GGG + tig0020342:100915-100934 Msa1380400:CDS 30.0%
ATTGGGTGAAAAATATGTCT+CGG + tig0020342:100932-100951 Msa1380400:CDS 30.0%
! AATGGTGAGATTTTAGATAC+AGG + tig0020342:100988-101007 Msa1380400:CDS 30.0%
! GATACATCTTTTGTACTACA+TGG + tig0020342:101078-101097 Msa1380400:CDS 30.0%
AGAGATTGTACAAATTGAGA+AGG + tig0020342:101161-101180 Msa1380400:CDS 30.0%
AAGTAAATGACATTTCAGTC+GGG + tig0020342:101337-101356 Msa1380400:CDS 30.0%
TGATACATCTATTGTGCTAA+AGG + tig0020342:101365-101384 Msa1380400:CDS 30.0%
GATACATCTATTGTGCTAAA+GGG + tig0020342:101366-101385 Msa1380400:CDS 30.0%
TATCAGCTCAAATGTAAAAC+AGG + tig0020342:101548-101567 Msa1380400:CDS 30.0%
!! AGGCTTTAGAAACATTAGAA+AGG + tig0020342:101568-101587 Msa1380400:CDS 30.0%
!! GGCTTTAGAAACATTAGAAA+GGG + tig0020342:101569-101588 Msa1380400:CDS 30.0%
! TGAACAAGTTTTGCAGAATA+CGG - tig0020342:101696-101715 None:intergenic 30.0%
!! GTCTAAGCACTGATTATAAA+TGG - tig0020342:101860-101879 None:intergenic 30.0%
TACAATGTGAGATTCTTGAA+TGG + tig0020342:101890-101909 Msa1380400:intron 30.0%
! TGATTCTGATTTGAGAAATC+CGG - tig0020342:102139-102158 None:intergenic 30.0%
TACCAAAACAGTTAAACAAG+AGG + tig0020342:102275-102294 Msa1380400:CDS 30.0%
!! TTCCTCTTGTTTAACTGTTT+TGG - tig0020342:102280-102299 None:intergenic 30.0%
ATGCATTAGCAGAAGAAAAT+AGG + tig0020342:102322-102341 Msa1380400:exon 30.0%
TGCATTAGCAGAAGAAAATA+GGG + tig0020342:102323-102342 Msa1380400:exon 30.0%
AATCCTGTAGTAAATTGTCA+AGG - tig0020342:102387-102406 None:intergenic 30.0%
ACTACAGGATTGATATATGT+TGG + tig0020342:102396-102415 Msa1380400:three_prime_UTR 30.0%
ACATAAATGCATGGAAAGTT+CGG - tig0020342:102450-102469 None:intergenic 30.0%
! CAATATTGGTCTATGATTCA+AGG - tig0020342:102523-102542 None:intergenic 30.0%
AACTGAATTTGGACAGAGAA+AGG - tig0020342:98429-98448 None:intergenic 35.0%
GTCCAAATTCAGTTAACTAG+TGG + tig0020342:98435-98454 Msa1380400:five_prime_UTR 35.0%
AGCCACTAGTTAACTGAATT+TGG - tig0020342:98440-98459 None:intergenic 35.0%
! GCATAACTTTGACTTTCTGA+TGG + tig0020342:98590-98609 Msa1380400:five_prime_UTR 35.0%
! AACTTTGACTTTCTGATGGA+AGG + tig0020342:98594-98613 Msa1380400:five_prime_UTR 35.0%
ATATTGTGCAATATAGGGAG+AGG + tig0020342:98665-98684 Msa1380400:CDS 35.0%
TCTCTGATTGTGAAGAATGA+TGG - tig0020342:98762-98781 None:intergenic 35.0%
TCATTCTTCACAATCAGAGA+TGG + tig0020342:98762-98781 Msa1380400:CDS 35.0%
TTCACAATCAGAGATGGAAT+TGG + tig0020342:98768-98787 Msa1380400:CDS 35.0%
CTTCTTTCGACAGTTAAAAC+AGG + tig0020342:99197-99216 Msa1380400:intron 35.0%
ACAGTTAAAACAGGATAACG+AGG + tig0020342:99206-99225 Msa1380400:intron 35.0%
CTTATTGAAGGCTATGTAGA+TGG + tig0020342:99282-99301 Msa1380400:CDS 35.0%
CATGAATATCTATGTAAGGG+TGG + tig0020342:99578-99597 Msa1380400:intron 35.0%
! CACAATTTTCATTTCTCAGG+TGG + tig0020342:99708-99727 Msa1380400:intron 35.0%
AAAGTAGGAACAGTAAACTG+TGG - tig0020342:99734-99753 None:intergenic 35.0%
! GATGCAGTAACTTTGAAAGT+AGG - tig0020342:99749-99768 None:intergenic 35.0%
ATGGCGAGTGAGATTAAAAT+GGG - tig0020342:99853-99872 None:intergenic 35.0%
TATGGCGAGTGAGATTAAAA+TGG - tig0020342:99854-99873 None:intergenic 35.0%
GGGAGGTTATGTTATACAAA+AGG + tig0020342:100234-100253 Msa1380400:CDS 35.0%
CTCAAACATTAGTAGTAGCT+TGG + tig0020342:100303-100322 Msa1380400:intron 35.0%
AACATTAGTAGTAGCTTGGA+AGG + tig0020342:100307-100326 Msa1380400:intron 35.0%
CCGAAGAAGTTAAATAACCA+AGG - tig0020342:100408-100427 None:intergenic 35.0%
! GTCAAATTTTGTAGGGCAAT+AGG + tig0020342:100539-100558 Msa1380400:intron 35.0%
TGGTTTCAGACTTTATCAGA+AGG + tig0020342:100634-100653 Msa1380400:CDS 35.0%
AACATACAACAAGTCAGTCA+AGG - tig0020342:100800-100819 None:intergenic 35.0%
TACCGATGAATCAAATGCTA+TGG + tig0020342:100843-100862 Msa1380400:CDS 35.0%
TGAATCAAATGCTATGGATG+AGG + tig0020342:100849-100868 Msa1380400:CDS 35.0%
TTGGGTGAAAAATATGTCTC+GGG + tig0020342:100933-100952 Msa1380400:CDS 35.0%
AGAGATTGTACAAAGTGAGA+AGG + tig0020342:101017-101036 Msa1380400:CDS 35.0%
AAAAGATGTATCACCTTCCT+CGG - tig0020342:101070-101089 None:intergenic 35.0%
GATGTATTGCTTTCCTCAAA+TGG - tig0020342:101210-101229 None:intergenic 35.0%
AGTAAATGACATTTCAGTCG+GGG + tig0020342:101338-101357 Msa1380400:CDS 35.0%
! CGACAATCTCACAATTCTTT+TGG - tig0020342:101392-101411 None:intergenic 35.0%
! CTGACATCATTTTCAACAGA+TGG - tig0020342:101720-101739 None:intergenic 35.0%
ATCTCGAAATCCAAAACTTC+AGG + tig0020342:101784-101803 Msa1380400:intron 35.0%
! GTTAGACTTACCTGAAGTTT+TGG - tig0020342:101797-101816 None:intergenic 35.0%
TATTTCCTTTCGGTTCATTC+AGG + tig0020342:102062-102081 Msa1380400:intron 35.0%
!! GCTTGTTATCAGATATTGTC+TGG - tig0020342:102225-102244 None:intergenic 35.0%
AAGCCTTGACAATTTACTAC+AGG + tig0020342:102381-102400 Msa1380400:three_prime_UTR 35.0%
ACTCACTTCACATAAATGCA+TGG - tig0020342:102459-102478 None:intergenic 35.0%
! GGTGTGAACAGAAACCTTTT+AGG + tig0020342:98478-98497 Msa1380400:five_prime_UTR 40.0%
CAATCAGAGATGGAATTGGA+AGG + tig0020342:98772-98791 Msa1380400:CDS 40.0%
TTAGCACATCAAGGACTGAT+TGG + tig0020342:98967-98986 Msa1380400:CDS 40.0%
TCAAGGACTGATTGGAAAGT+AGG + tig0020342:98975-98994 Msa1380400:intron 40.0%
TTCCGTGTTATGTATCGTGA+AGG + tig0020342:99231-99250 Msa1380400:CDS 40.0%
GTCCTTCACGATACATAACA+CGG - tig0020342:99236-99255 None:intergenic 40.0%
TGCATCTGATTGTTTGCAGA+AGG + tig0020342:99763-99782 Msa1380400:CDS 40.0%
TGATGTGATTCCTGAAGCAA+AGG + tig0020342:100189-100208 Msa1380400:CDS 40.0%
GATGTGATTCCTGAAGCAAA+GGG + tig0020342:100190-100209 Msa1380400:CDS 40.0%
!! GTGAGAATTGATTTGTTGGG+AGG + tig0020342:100217-100236 Msa1380400:CDS 40.0%
CTTTCATTGGGTTTGAACCT+TGG + tig0020342:100388-100407 Msa1380400:intron 40.0%
TTGTAGGGCAATAGGGAATT+TGG + tig0020342:100547-100566 Msa1380400:intron 40.0%
AGGGAATTTGGATATCAAGC+TGG + tig0020342:100559-100578 Msa1380400:CDS 40.0%
ACAGCCTATAACAACACCAA+GGG - tig0020342:100739-100758 None:intergenic 40.0%
TACAGCCTATAACAACACCA+AGG - tig0020342:100740-100759 None:intergenic 40.0%
!! GCTGTAGCTTCTAAGATGAA+CGG + tig0020342:100754-100773 Msa1380400:CDS 40.0%
ATGAACGGCGACAAAGAATT+CGG + tig0020342:100769-100788 Msa1380400:CDS 40.0%
! CTTTTGTACTACATGGCAGT+AGG + tig0020342:101085-101104 Msa1380400:CDS 40.0%
AGTACACGACATTCCATTTG+AGG + tig0020342:101194-101213 Msa1380400:CDS 40.0%
GAGATTGCAGAAGCAGATAT+TGG + tig0020342:101282-101301 Msa1380400:CDS 40.0%
GAAAATGATGTCAGTGCCAA+AGG + tig0020342:101726-101745 Msa1380400:intron 40.0%
!! TACAAAGCAGTTTTGTGAGG+TGG - tig0020342:101821-101840 None:intergenic 40.0%
!! CCTTACAAAGCAGTTTTGTG+AGG - tig0020342:101824-101843 None:intergenic 40.0%
CCTCACAAAACTGCTTTGTA+AGG + tig0020342:101821-101840 Msa1380400:intron 40.0%
CAAAACTGCTTTGTAAGGTG+AGG + tig0020342:101826-101845 Msa1380400:intron 40.0%
!! TCAATCTGGCTTGCTTCAAT+TGG - tig0020342:102169-102188 None:intergenic 40.0%
! ACCAGTGTTGTTCCTTGTTT+GGG + tig0020342:102419-102438 Msa1380400:three_prime_UTR 40.0%
!! ATGAGTCTTAGGAGTGTCAA+AGG + tig0020342:102632-102651 Msa1380400:three_prime_UTR 40.0%
TGTGCAATATAGGGAGAGGT+TGG + tig0020342:98669-98688 Msa1380400:CDS 45.0%
AGTGCTTCTGCAGATGAAAG+TGG + tig0020342:98939-98958 Msa1380400:CDS 45.0%
GTGGAGGATTTAGCACATCA+AGG + tig0020342:98958-98977 Msa1380400:CDS 45.0%
TATGTATCGTGAAGGACCAG+AGG + tig0020342:99239-99258 Msa1380400:CDS 45.0%
ATGTATCGTGAAGGACCAGA+GGG + tig0020342:99240-99259 Msa1380400:CDS 45.0%
GTATTATAGGGAGTTCCCTC+TGG - tig0020342:99258-99277 None:intergenic 45.0%
GTAGATGGACCTGTTGATGT+TGG + tig0020342:99297-99316 Msa1380400:CDS 45.0%
TGTGACTGACCAACATCAAC+AGG - tig0020342:99309-99328 None:intergenic 45.0%
! TGACAGCTTTATGCGTCTCA+TGG + tig0020342:99431-99450 Msa1380400:intron 45.0%
! GACAGCTTTATGCGTCTCAT+GGG + tig0020342:99432-99451 Msa1380400:intron 45.0%
!! GTGCTATTTGTTCTCCAGTC+TGG - tig0020342:99790-99809 None:intergenic 45.0%
AAGAAAGGATGAAGCCTCCA+TGG + tig0020342:99919-99938 Msa1380400:intron 45.0%
TCAAGGCAACTTATTGGCAG+TGG + tig0020342:100614-100633 Msa1380400:CDS 45.0%
CTTTGACTAAGCTCTTCAGC+AGG - tig0020342:100904-100923 None:intergenic 45.0%
GGTGAAAAATATGTCTCGGG+AGG + tig0020342:100936-100955 Msa1380400:CDS 45.0%
AGTGCATGACATTTCAACCG+AGG + tig0020342:101050-101069 Msa1380400:CDS 45.0%
CATGACATTTCAACCGAGGA+AGG + tig0020342:101054-101073 Msa1380400:CDS 45.0%
AATACGGATTTCGTTCACGC+AGG + tig0020342:101610-101629 Msa1380400:CDS 45.0%
! TATGTTGCTGCTTGGTCCTT+TGG - tig0020342:101745-101764 None:intergenic 45.0%
GACCAAGCAGCAACATACTA+CGG + tig0020342:101748-101767 Msa1380400:intron 45.0%
ACCAAGCAGCAACATACTAC+GGG + tig0020342:101749-101768 Msa1380400:intron 45.0%
AGGAGCAGATCTTAGCATGA+AGG + tig0020342:102090-102109 Msa1380400:CDS 45.0%
GGTACATCTGAAGACATGTC+TGG - tig0020342:102259-102278 None:intergenic 45.0%
! GACCAGTGTTGTTCCTTGTT+TGG + tig0020342:102418-102437 Msa1380400:three_prime_UTR 45.0%
! CCAGTGTTGTTCCTTGTTTG+GGG + tig0020342:102420-102439 Msa1380400:three_prime_UTR 45.0%
AGTTCGGAAAACCCCAAACA+AGG - tig0020342:102434-102453 None:intergenic 45.0%
GCTTCTGCAGATGAAAGTGG+AGG + tig0020342:98942-98961 Msa1380400:CDS 50.0%
TGTTTGCAGAAGGTCCAGAC+TGG + tig0020342:99773-99792 Msa1380400:CDS 50.0%
TCCATGGCCACTGTCTACAA+GGG + tig0020342:99935-99954 Msa1380400:CDS 50.0%
CTCACAACACCCTTTGCTTC+AGG - tig0020342:100202-100221 None:intergenic 50.0%
TTCTGACACTAACCAGCCCT+TGG + tig0020342:100720-100739 Msa1380400:intron 50.0%
CCTATAACAACACCAAGGGC+TGG - tig0020342:100735-100754 None:intergenic 50.0%
!! CCAGCCCTTGGTGTTGTTAT+AGG + tig0020342:100732-100751 Msa1380400:intron 50.0%
TCCCGTAGTATGTTGCTGCT+TGG - tig0020342:101753-101772 None:intergenic 50.0%
GTGTGCCTGAATGAACCGAA+AGG - tig0020342:102070-102089 None:intergenic 50.0%
TTCGGTTCATTCAGGCACAC+AGG + tig0020342:102070-102089 Msa1380400:intron 50.0%
CCCCAAACAAGGAACAACAC+TGG - tig0020342:102423-102442 None:intergenic 50.0%
CTTGTAGACAGTGGCCATGG+AGG - tig0020342:99936-99955 None:intergenic 55.0%
CTCCATGGCCACTGTCTACA+AGG + tig0020342:99934-99953 Msa1380400:CDS 55.0%
TCCCTTGTAGACAGTGGCCA+TGG - tig0020342:99939-99958 None:intergenic 55.0%
ATGGCCACTGTCTACAAGGG+AGG + tig0020342:99938-99957 Msa1380400:CDS 55.0%
ACAGCCTCCCTTGTAGACAG+TGG - tig0020342:99945-99964 None:intergenic 55.0%
CGGCGACAAAGAATTCGGCA+AGG + tig0020342:100774-100793 Msa1380400:CDS 55.0%
Chromosome Type Strat End Strand Name
tig0020342 gene 98378 102665 98378 ID=Msa1380400;Name=Msa1380400
tig0020342 mRNA 98378 102665 98378 ID=Msa1380400-mRNA-1;Parent=Msa1380400;Name=Msa1380400-mRNA-1;_AED=0.12;_eAED=0.12;_QI=271|0.88|0.9|1|1|1|10|335|655
tig0020342 exon 98378 98793 98378 ID=Msa1380400-mRNA-1:exon:7094;Parent=Msa1380400-mRNA-1
tig0020342 exon 98877 98992 98877 ID=Msa1380400-mRNA-1:exon:7095;Parent=Msa1380400-mRNA-1
tig0020342 exon 99210 99318 99210 ID=Msa1380400-mRNA-1:exon:7096;Parent=Msa1380400-mRNA-1
tig0020342 exon 99437 99476 99437 ID=Msa1380400-mRNA-1:exon:7097;Parent=Msa1380400-mRNA-1
tig0020342 exon 99727 99816 99727 ID=Msa1380400-mRNA-1:exon:7098;Parent=Msa1380400-mRNA-1
tig0020342 exon 99926 100025 99926 ID=Msa1380400-mRNA-1:exon:7099;Parent=Msa1380400-mRNA-1
tig0020342 exon 100142 100281 100142 ID=Msa1380400-mRNA-1:exon:7100;Parent=Msa1380400-mRNA-1
tig0020342 exon 100553 100655 100553 ID=Msa1380400-mRNA-1:exon:7101;Parent=Msa1380400-mRNA-1
tig0020342 exon 100754 101631 100754 ID=Msa1380400-mRNA-1:exon:7102;Parent=Msa1380400-mRNA-1
tig0020342 exon 102084 102665 102084 ID=Msa1380400-mRNA-1:exon:7103;Parent=Msa1380400-mRNA-1
tig0020342 five_prime_UTR 98378 98648 98378 ID=Msa1380400-mRNA-1:five_prime_utr;Parent=Msa1380400-mRNA-1
tig0020342 CDS 98649 98793 98649 ID=Msa1380400-mRNA-1:cds;Parent=Msa1380400-mRNA-1
tig0020342 CDS 98877 98992 98877 ID=Msa1380400-mRNA-1:cds;Parent=Msa1380400-mRNA-1
tig0020342 CDS 99210 99318 99210 ID=Msa1380400-mRNA-1:cds;Parent=Msa1380400-mRNA-1
tig0020342 CDS 99437 99476 99437 ID=Msa1380400-mRNA-1:cds;Parent=Msa1380400-mRNA-1
tig0020342 CDS 99727 99816 99727 ID=Msa1380400-mRNA-1:cds;Parent=Msa1380400-mRNA-1
tig0020342 CDS 99926 100025 99926 ID=Msa1380400-mRNA-1:cds;Parent=Msa1380400-mRNA-1
tig0020342 CDS 100142 100281 100142 ID=Msa1380400-mRNA-1:cds;Parent=Msa1380400-mRNA-1
tig0020342 CDS 100553 100655 100553 ID=Msa1380400-mRNA-1:cds;Parent=Msa1380400-mRNA-1
tig0020342 CDS 100754 101631 100754 ID=Msa1380400-mRNA-1:cds;Parent=Msa1380400-mRNA-1
tig0020342 CDS 102084 102330 102084 ID=Msa1380400-mRNA-1:cds;Parent=Msa1380400-mRNA-1
tig0020342 three_prime_UTR 102331 102665 102331 ID=Msa1380400-mRNA-1:three_prime_utr;Parent=Msa1380400-mRNA-1
Gene Sequence

>Msa1380400

ATGGACAAAAGGAAAAATATTGTGCAATATAGGGAGAGGTTGGATAACACTCTTACCTCATTTGATCTTACAAATTATGAGAAACTCAAAACTCTTGTCAAAAGTCAACTCCATCATTCTTCACAATCAGAGATGGAATTGGAAGGATATGAGGAGAAACTAGAAAATAAGACTGCTGAGTTATCAAACTTTCTTGATATGATGAGAAGTGCTTCTGCAGATGAAAGTGGAGGATTTAGCACATCAAGGACTGATTGGAAATTAAAACAGGATAACGAGGAATTCCGTGTTATGTATCGTGAAGGACCAGAGGGAACTCCCTATAATACATTGCTTATTGAAGGCTATGTAGATGGACCTGTTGATGTTGCTTTATGCGTCTCATGGGAATCATCCCTTTATAAGAAATGGTGGCCACAGTTTACTGTTCCTACTTTCAAAGTTACTGCATCTGATTGTTTGCAGAAGGTCCAGACTGGAGAACAAATAGCACTAATAAGGATGAAGCCTCCATGGCCACTGTCTACAAGGGAGGCTGTAGCGCATTATTATCTGTTTGAGTACATTCAAGATGACTTGATAGTAGTTCTTTTGAAAACGGTCACTGAGTCAGAGAAAATTAATGAGACTATTGATGGCTTCAGCAATGATGTGATTCCTGAAGCAAAGGGTGTTGTGAGAATTGATTTGTTGGGAGGTTATGTTATACAAAAGGTGACATCTGAAAGAAGTTATTTCCGGGCAATAGGGAATTTGGATATCAAGCTGGATTTTATGCCTCCATCCCTTATAAATTTCATTTCAAGGCAACTTATTGGCAGTGGTTTCAGACTTTATCAGAAGGCTGTAGCTTCTAAGATGAACGGCGACAAAGAATTCGGCAAGGCCTTGACTGACTTGTTGTATGTTAGAATTCGTGAAGCTCTATACAATACCGATGAATCAAATGCTATGGATGAGGACGAGCTTAAGCAAGTTGCAAGCATTTTTCCTGCTGAAGAGCTTAGTCAAAGTAAGCAAGATTGGGTGAAAAATATGTCTCGGGAGGATAGAAGCAACCAAAATGCAAATAATTACAATGGTGAGATTTTAGATACAGGTAGTGAAGAGATTGTACAAAGTGAGAAGGATTTCAAGAAAGTGCATGACATTTCAACCGAGGAAGGTGATACATCTTTTGTACTACATGGCAGTAGGAATTGTGAGATTGTCAACGCAGACAGTGAAGAGATTGTAGAAGAAAATATTGAAGAGATTGTACAAATTGAGAAGGATGTCAAGAAAGTACACGACATTCCATTTGAGGAAAGCAATACATCTTTTGTACTAAAAGGAAATAGTAACTGTGAGATTGTAGATGCAGATAGAGAAGAGATTGCAGAAGCAGATATTGGAGAGATTGTACAAATTGAAAAGAATGTAAAGAAAGTAAATGACATTTCAGTCGGGGAAGTTGATACATCTATTGTGCTAAAGGGCCAAAAGAATTGTGAGATTGTCGACGCAGATAGTGAAGCGACCATAGAAGCAAATATTGAAGATATTGTACAAATTGAAAAGGATGTGAATAAAGAACATGACGTTTCAATTGAATATGATAATATACGAGGTGTATTGAAGAGAAAGAGTAATGTATATATCAGCTCAAATGTAAAACAGGCTTTAGAAACATTAGAAAGGGCTATTTCATCAGTTCAGAAATACGGATTTCGTTCACGCAGGCACACAGGAGCAGATCTTAGCATGAAGGAAGTAAATTACAACAAAATAGCACCGGATTTCTCAAATCAGAATCACTTGAGACCAATTGAAGCAAGCCAGATTGATTCATATTCATTGAAAAATGAAACAACGCTGAACCAGACAATATCTGATAACAAGCAATATACAAGACCAGACATGTCTTCAGATGTACCAAAACAGTTAAACAAGAGGAAAAATTATAGATACTGTTGTTTTATGCATTAG

Protein sequence

>Msa1380400

MDKRKNIVQYRERLDNTLTSFDLTNYEKLKTLVKSQLHHSSQSEMELEGYEEKLENKTAELSNFLDMMRSASADESGGFSTSRTDWKLKQDNEEFRVMYREGPEGTPYNTLLIEGYVDGPVDVALCVSWESSLYKKWWPQFTVPTFKVTASDCLQKVQTGEQIALIRMKPPWPLSTREAVAHYYLFEYIQDDLIVVLLKTVTESEKINETIDGFSNDVIPEAKGVVRIDLLGGYVIQKVTSERSYFRAIGNLDIKLDFMPPSLINFISRQLIGSGFRLYQKAVASKMNGDKEFGKALTDLLYVRIREALYNTDESNAMDEDELKQVASIFPAEELSQSKQDWVKNMSREDRSNQNANNYNGEILDTGSEEIVQSEKDFKKVHDISTEEGDTSFVLHGSRNCEIVNADSEEIVEENIEEIVQIEKDVKKVHDIPFEESNTSFVLKGNSNCEIVDADREEIAEADIGEIVQIEKNVKKVNDISVGEVDTSIVLKGQKNCEIVDADSEATIEANIEDIVQIEKDVNKEHDVSIEYDNIRGVLKRKSNVYISSNVKQALETLERAISSVQKYGFRSRRHTGADLSMKEVNYNKIAPDFSNQNHLRPIEASQIDSYSLKNETTLNQTISDNKQYTRPDMSSDVPKQLNKRKNYRYCCFMH*