AlfalfaGEDB | Msa0200650

M. sativa cultivar zhongmu-4 / Msa0200650

KEGG: -
GO: GO:0000226 GO:0001101 GO:0001558 GO:0002237 GO:0003674 GO:0005488 GO:0005507 GO:0005509 GO:0005515 GO:0005516 GO:0005543 GO:0005546 GO:0005547 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005856 GO:0005874 GO:0005881 GO:0005886 GO:0005911 GO:0006464 GO:0006497 GO:0006498 GO:0006499 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0006970 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0008017 GO:0008092 GO:0008150 GO:0008152 GO:0008289 GO:0009058 GO:0009059 GO:0009266 GO:0009267 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009735 GO:0009743 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010118 GO:0010350 GO:0010555 GO:0010638 GO:0010639 GO:0015630 GO:0015631 GO:0016020 GO:0016032 GO:0016043 GO:0018377 GO:0019058 GO:0019538 GO:0022603 GO:0022604 GO:0030054 GO:0030308 GO:0030865 GO:0031110 GO:0031111 GO:0031112 GO:0031113 GO:0031114 GO:0031115 GO:0031117 GO:0031122 GO:0031224 GO:0031225 GO:0031226 GO:0031333 GO:0031365 GO:0031667 GO:0031668 GO:0031669 GO:0032026 GO:0032271 GO:0032272 GO:0032886 GO:0033043 GO:0033554 GO:0034645 GO:0035091 GO:0035864 GO:0035865 GO:0036211 GO:0040008 GO:0042157 GO:0042158 GO:0042221 GO:0042594 GO:0042742 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043243 GO:0043244 GO:0043254 GO:0043325 GO:0043412 GO:0043543 GO:0043622 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0044766 GO:0045926 GO:0046658 GO:0046688 GO:0046794 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048640 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051128 GO:0051129 GO:0051130 GO:0051179 GO:0051234 GO:0051493 GO:0051494 GO:0051495 GO:0051510 GO:0051511 GO:0051592 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070507 GO:0070887 GO:0071214 GO:0071216 GO:0071219 GO:0071241 GO:0071248 GO:0071280 GO:0071281 GO:0071286 GO:0071310 GO:0071322 GO:0071325 GO:0071470 GO:0071472 GO:0071496 GO:0071704 GO:0071840 GO:0071944 GO:0072708 GO:0072709 GO:0075733 GO:0080025 GO:0090332 GO:0097435 GO:0098542 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0104004 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901701 GO:1901879 GO:1901881 GO:1901981 GO:1902579 GO:1902903 GO:1902904 GO:1902905 GO:1902936
PFAM: PF05558.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0200650	XP_013463310.1	97.664	214	5	0	1	214	1	214	9.06e-136	389

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0200650	sp\|Q96262\|PCAP1_ARATH	61.326	181	58	2	1	171	1	179	2.12e-54	176

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0200650	B7FH09	97.664	214	5	0	1	214	1	214	4.33e-136	389

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0012710	Msa0200650	0.821586	3.731643e-53	-8.615850e-47
Msa0026430	Msa0200650	0.821992	3.005658e-53	-8.615850e-47
Msa0026910	Msa0200650	0.822910	1.839281e-53	-8.615850e-47
Msa0032470	Msa0200650	0.818748	1.667337e-52	-8.615850e-47
Msa0040620	Msa0200650	0.806926	6.489790e-50	-8.615850e-47
Msa0042550	Msa0200650	0.805679	1.188436e-49	-8.615850e-47
Msa0043500	Msa0200650	0.821789	3.348971e-53	-8.615850e-47
Msa0043650	Msa0200650	0.816185	6.300316e-52	-8.615850e-47
Msa0043980	Msa0200650	0.801777	7.673560e-49	-8.615850e-47
Msa0045550	Msa0200650	0.831240	1.867014e-55	-8.615850e-47
Msa0051630	Msa0200650	0.829237	5.761256e-55	-8.615850e-47
Msa0051740	Msa0200650	0.834829	2.390766e-56	-8.615850e-47
Msa0051750	Msa0200650	0.813866	2.060356e-51	-8.615850e-47
Msa0055070	Msa0200650	0.853664	2.058186e-61	-8.615850e-47
Msa0061500	Msa0200650	0.809406	1.921963e-50	-8.615850e-47
Msa0064110	Msa0200650	0.829368	5.354553e-55	-8.615850e-47
Msa0065650	Msa0200650	0.807834	4.164718e-50	-8.615850e-47
Msa0074750	Msa0200650	0.822469	2.329257e-53	-8.615850e-47
Msa0077030	Msa0200650	0.815105	1.095983e-51	-8.615850e-47
Msa0077450	Msa0200650	0.839813	1.265499e-57	-8.615850e-47
Msa0081620	Msa0200650	0.806797	6.909418e-50	-8.615850e-47
Msa0090550	Msa0200650	0.802396	5.722331e-49	-8.615850e-47
Msa0099650	Msa0200650	0.810248	1.266955e-50	-8.615850e-47
Msa0101020	Msa0200650	0.858199	9.705192e-63	-8.615850e-47
Msa0126790	Msa0200650	0.817181	3.767292e-52	-8.615850e-47
Msa0138020	Msa0200650	0.807099	5.963621e-50	-8.615850e-47
Msa0138210	Msa0200650	0.826765	2.266201e-54	-8.615850e-47
Msa0138500	Msa0200650	0.800694	1.278196e-48	-8.615850e-47
Msa0138520	Msa0200650	0.800420	1.453148e-48	-8.615850e-47
Msa0139670	Msa0200650	0.803083	4.129457e-49	-8.615850e-47
Msa0139700	Msa0200650	0.800368	1.489118e-48	-8.615850e-47
Msa0142500	Msa0200650	0.831367	1.737680e-55	-8.615850e-47
Msa0145110	Msa0200650	0.850957	1.213178e-60	-8.615850e-47
Msa0152560	Msa0200650	0.811119	8.211096e-51	-8.615850e-47
Msa0160960	Msa0200650	0.809496	1.838298e-50	-8.615850e-47
Msa0170140	Msa0200650	0.825607	4.275211e-54	-8.615850e-47
Msa0171870	Msa0200650	0.818176	2.247057e-52	-8.615850e-47
Msa0175050	Msa0200650	0.815855	7.464141e-52	-8.615850e-47
Msa0178510	Msa0200650	0.825109	5.607460e-54	-8.615850e-47
Msa0183420	Msa0200650	0.802345	5.864202e-49	-8.615850e-47
Msa0186950	Msa0200650	0.810872	9.285231e-51	-8.615850e-47
Msa0187490	Msa0200650	0.813341	2.688433e-51	-8.615850e-47
Msa0187830	Msa0200650	0.810916	9.083428e-51	-8.615850e-47
Msa0191890	Msa0200650	0.844858	5.828026e-59	-8.615850e-47
Msa0192640	Msa0200650	0.809534	1.804425e-50	-8.615850e-47
Msa0193540	Msa0200650	0.834768	2.476012e-56	-8.615850e-47
Msa0194080	Msa0200650	0.812749	3.624985e-51	-8.615850e-47
Msa0197610	Msa0200650	0.813065	3.090589e-51	-8.615850e-47
Msa0200650	Msa0202930	0.860406	2.112735e-63	-8.615850e-47
Msa0200650	Msa0207030	0.803545	3.312615e-49	-8.615850e-47
Msa0200650	Msa0218350	0.801511	8.699731e-49	-8.615850e-47
Msa0200650	Msa0220730	0.807081	6.015095e-50	-8.615850e-47
Msa0200650	Msa0226180	0.836196	1.078020e-56	-8.615850e-47
Msa0200650	Msa0230370	0.812585	3.937410e-51	-8.615850e-47
Msa0200650	Msa0235470	0.802203	6.270446e-49	-8.615850e-47
Msa0200650	Msa0235940	0.824606	7.371001e-54	-8.615850e-47
Msa0200650	Msa0236420	0.820391	7.030089e-53	-8.615850e-47
Msa0200650	Msa0238030	0.812131	4.947066e-51	-8.615850e-47
Msa0200650	Msa0240270	0.838348	3.034087e-57	-8.615850e-47
Msa0200650	Msa0243320	0.831983	1.224708e-55	-8.615850e-47
Msa0200650	Msa0270960	0.819108	1.380868e-52	-8.615850e-47
Msa0200650	Msa0271550	0.813580	2.381731e-51	-8.615850e-47
Msa0200650	Msa0271790	0.816811	4.562437e-52	-8.615850e-47
Msa0200650	Msa0274630	0.828922	6.868064e-55	-8.615850e-47
Msa0200650	Msa0277420	0.807025	6.183537e-50	-8.615850e-47
Msa0200650	Msa0281740	0.923703	1.870681e-89	-8.615850e-47
Msa0200650	Msa0284450	0.823828	1.122260e-53	-8.615850e-47
Msa0200650	Msa0285330	0.810712	1.005539e-50	-8.615850e-47
Msa0200650	Msa0304840	0.849868	2.453208e-60	-8.615850e-47
Msa0200650	Msa0307310	0.830090	3.570726e-55	-8.615850e-47
Msa0200650	Msa0309270	0.813533	2.439075e-51	-8.615850e-47
Msa0200650	Msa0310430	0.820406	6.974197e-53	-8.615850e-47
Msa0200650	Msa0311470	0.823364	1.441743e-53	-8.615850e-47
Msa0200650	Msa0312530	0.823620	1.255599e-53	-8.615850e-47
Msa0200650	Msa0314060	0.856815	2.492734e-62	-8.615850e-47
Msa0200650	Msa0317960	0.800334	1.513317e-48	-8.615850e-47
Msa0200650	Msa0319290	0.823100	1.660767e-53	-8.615850e-47
Msa0200650	Msa0320860	0.920263	1.597563e-87	-8.615850e-47
Msa0200650	Msa0322680	0.833167	6.229152e-56	-8.615850e-47
Msa0200650	Msa0341230	0.851290	9.774717e-61	-8.615850e-47
Msa0200650	Msa0347750	0.818278	2.130721e-52	-8.615850e-47
Msa0200650	Msa0347950	0.846419	2.197620e-59	-8.615850e-47
Msa0200650	Msa0347990	0.848607	5.503148e-60	-8.615850e-47
Msa0200650	Msa0371950	0.825686	4.093982e-54	-8.615850e-47
Msa0200650	Msa0376600	0.833526	5.069383e-56	-8.615850e-47
Msa0200650	Msa0382370	0.828102	1.083515e-54	-8.615850e-47
Msa0200650	Msa0387050	0.810178	1.311331e-50	-8.615850e-47
Msa0200650	Msa0388650	0.813807	2.122895e-51	-8.615850e-47
Msa0200650	Msa0390480	0.818438	1.960193e-52	-8.615850e-47
Msa0200650	Msa0390960	0.800636	1.313609e-48	-8.615850e-47
Msa0200650	Msa0394260	0.808838	2.543441e-50	-8.615850e-47
Msa0200650	Msa0395980	0.815321	9.816432e-52	-8.615850e-47
Msa0200650	Msa0398200	0.843394	1.439535e-58	-8.615850e-47
Msa0200650	Msa0403490	0.808429	3.110731e-50	-8.615850e-47
Msa0200650	Msa0403770	0.808964	2.390464e-50	-8.615850e-47
Msa0200650	Msa0417330	0.804968	1.674297e-49	-8.615850e-47
Msa0200650	Msa0422180	0.846518	2.066099e-59	-8.615850e-47
Msa0200650	Msa0429090	0.802540	5.345438e-49	-8.615850e-47
Msa0200650	Msa0432160	0.839758	1.308246e-57	-8.615850e-47
Msa0200650	Msa0432670	0.813497	2.484081e-51	-8.615850e-47
Msa0200650	Msa0436370	0.832361	9.875944e-56	-8.615850e-47
Msa0200650	Msa0443430	0.805343	1.397254e-49	-8.615850e-47
Msa0200650	Msa0458740	0.804649	1.951875e-49	-8.615850e-47
Msa0200650	Msa0476680	0.838480	2.805361e-57	-8.615850e-47
Msa0200650	Msa0477620	0.813662	2.284958e-51	-8.615850e-47
Msa0200650	Msa0482040	0.805202	1.495617e-49	-8.615850e-47
Msa0200650	Msa0482940	0.809036	2.307355e-50	-8.615850e-47
Msa0200650	Msa0485490	0.811097	8.302981e-51	-8.615850e-47
Msa0200650	Msa0489660	0.810956	8.907177e-51	-8.615850e-47
Msa0200650	Msa0491000	0.803372	3.596942e-49	-8.615850e-47
Msa0200650	Msa0514610	0.840771	7.115221e-58	-8.615850e-47
Msa0200650	Msa0518380	0.803449	3.467483e-49	-8.615850e-47
Msa0200650	Msa0521010	0.835496	1.622257e-56	-8.615850e-47
Msa0200650	Msa0526020	0.822486	2.308941e-53	-8.615850e-47
Msa0200650	Msa0530650	0.803679	3.106892e-49	-8.615850e-47
Msa0200650	Msa0538160	0.809498	1.836556e-50	-8.615850e-47
Msa0200650	Msa0559500	0.805661	1.198554e-49	-8.615850e-47
Msa0200650	Msa0566350	0.874417	6.865129e-68	-8.615850e-47
Msa0200650	Msa0566750	0.875284	3.479913e-68	-8.615850e-47
Msa0200650	Msa0572480	0.848877	4.633059e-60	-8.615850e-47
Msa0200650	Msa0581400	0.823403	1.411647e-53	-8.615850e-47
Msa0200650	Msa0588220	0.800434	1.443736e-48	-8.615850e-47
Msa0200650	Msa0594200	0.807898	4.036416e-50	-8.615850e-47
Msa0200650	Msa0600450	0.839732	1.329148e-57	-8.615850e-47
Msa0200650	Msa0607580	0.801714	7.904409e-49	-8.615850e-47
Msa0200650	Msa0616550	0.833118	6.406672e-56	-8.615850e-47
Msa0200650	Msa0620330	0.815797	7.690546e-52	-8.615850e-47
Msa0200650	Msa0621600	0.812255	4.647491e-51	-8.615850e-47
Msa0200650	Msa0621650	0.812825	3.489481e-51	-8.615850e-47
Msa0200650	Msa0622120	0.810141	1.336106e-50	-8.615850e-47
Msa0200650	Msa0624060	0.802894	4.517969e-49	-8.615850e-47
Msa0200650	Msa0638360	0.814573	1.438473e-51	-8.615850e-47
Msa0200650	Msa0640940	0.850911	1.250419e-60	-8.615850e-47
Msa0200650	Msa0641340	0.814370	1.594625e-51	-8.615850e-47
Msa0200650	Msa0641730	0.810262	1.257840e-50	-8.615850e-47
Msa0200650	Msa0656000	0.808837	2.544635e-50	-8.615850e-47
Msa0200650	Msa0658680	0.812440	4.235408e-51	-8.615850e-47
Msa0200650	Msa0673120	0.803803	2.928135e-49	-8.615850e-47
Msa0200650	Msa0679360	0.839544	1.487238e-57	-8.615850e-47
Msa0200650	Msa0698440	0.851043	1.147574e-60	-8.615850e-47
Msa0200650	Msa0699880	0.808457	3.068189e-50	-8.615850e-47
Msa0200650	Msa0701100	0.826930	2.070177e-54	-8.615850e-47
Msa0200650	Msa0703440	0.804556	2.040977e-49	-8.615850e-47
Msa0200650	Msa0705990	0.825857	3.728818e-54	-8.615850e-47
Msa0200650	Msa0707010	0.818264	2.146164e-52	-8.615850e-47
Msa0200650	Msa0707430	0.809374	1.953309e-50	-8.615850e-47
Msa0200650	Msa0709120	0.802390	5.739449e-49	-8.615850e-47
Msa0200650	Msa0709160	0.835596	1.530651e-56	-8.615850e-47
Msa0200650	Msa0711130	0.802269	6.078103e-49	-8.615850e-47
Msa0200650	Msa0721340	0.832111	1.139189e-55	-8.615850e-47
Msa0200650	Msa0732600	0.861033	1.363080e-63	-8.615850e-47
Msa0200650	Msa0741070	0.827738	1.325555e-54	-8.615850e-47
Msa0200650	Msa0741160	0.809644	1.708559e-50	-8.615850e-47
Msa0200650	Msa0743530	0.822367	2.459883e-53	-8.615850e-47
Msa0200650	Msa0749440	0.801819	7.519790e-49	-8.615850e-47
Msa0200650	Msa0750250	0.864386	1.262675e-64	-8.615850e-47
Msa0200650	Msa0750810	0.808128	3.606004e-50	-8.615850e-47
Msa0200650	Msa0756380	0.803139	4.019478e-49	-8.615850e-47
Msa0200650	Msa0763890	0.810968	8.852536e-51	-8.615850e-47
Msa0200650	Msa0763920	0.821837	3.264648e-53	-8.615850e-47
Msa0200650	Msa0773590	0.826978	2.015881e-54	-8.615850e-47
Msa0200650	Msa0784480	0.806708	7.214320e-50	-8.615850e-47
Msa0200650	Msa0787150	0.842247	2.905482e-58	-8.615850e-47
Msa0200650	Msa0788540	0.816252	6.084495e-52	-8.615850e-47
Msa0200650	Msa0789560	0.842949	1.891313e-58	-8.615850e-47
Msa0200650	Msa0797770	0.807874	4.084777e-50	-8.615850e-47
Msa0200650	Msa0805420	0.871700	5.595079e-67	-8.615850e-47
Msa0200650	Msa0808100	0.825765	3.920350e-54	-8.615850e-47
Msa0200650	Msa0809140	0.815025	1.141930e-51	-8.615850e-47
Msa0200650	Msa0811040	0.831414	1.692445e-55	-8.615850e-47
Msa0200650	Msa0818060	0.809923	1.488746e-50	-8.615850e-47
Msa0200650	Msa0821800	0.800867	1.178077e-48	-8.615850e-47
Msa0200650	Msa0835230	0.804244	2.370985e-49	-8.615850e-47
Msa0200650	Msa0842770	0.865260	6.720555e-65	-8.615850e-47
Msa0200650	Msa0844110	0.801545	8.561214e-49	-8.615850e-47
Msa0200650	Msa0844280	0.824274	8.819761e-54	-8.615850e-47
Msa0200650	Msa0857300	0.853491	2.307082e-61	-8.615850e-47
Msa0200650	Msa0866070	0.804224	2.394000e-49	-8.615850e-47
Msa0200650	Msa0866400	0.826509	2.608554e-54	-8.615850e-47
Msa0200650	Msa0866410	0.819167	1.338464e-52	-8.615850e-47
Msa0200650	Msa0877710	0.832978	6.941205e-56	-8.615850e-47
Msa0200650	Msa0892570	0.819163	1.341639e-52	-8.615850e-47
Msa0200650	Msa0921420	0.802003	6.894118e-49	-8.615850e-47
Msa0200650	Msa0924310	0.819794	9.630139e-53	-8.615850e-47
Msa0200650	Msa0936390	0.804448	2.149924e-49	-8.615850e-47
Msa0200650	Msa0957870	0.813794	2.137296e-51	-8.615850e-47
Msa0200650	Msa0957970	0.806952	6.407394e-50	-8.615850e-47
Msa0200650	Msa0981040	0.831826	1.338995e-55	-8.615850e-47
Msa0200650	Msa0984510	0.809974	1.451550e-50	-8.615850e-47
Msa0200650	Msa0992580	0.805729	1.159928e-49	-8.615850e-47
Msa0200650	Msa0992600	0.833415	5.402625e-56	-8.615850e-47
Msa0200650	Msa1006010	-0.803739	3.019453e-49	-8.615850e-47
Msa0200650	Msa1008750	0.826202	3.086655e-54	-8.615850e-47
Msa0200650	Msa1010460	0.809107	2.228485e-50	-8.615850e-47
Msa0200650	Msa1011090	0.809831	1.557948e-50	-8.615850e-47
Msa0200650	Msa1029060	-0.829429	5.172899e-55	-8.615850e-47
Msa0200650	Msa1034700	0.830038	3.678411e-55	-8.615850e-47
Msa0200650	Msa1039760	0.813876	2.049848e-51	-8.615850e-47
Msa0200650	Msa1042660	0.809132	2.200968e-50	-8.615850e-47
Msa0200650	Msa1050740	0.814016	1.909601e-51	-8.615850e-47
Msa0200650	Msa1063420	0.842457	2.556753e-58	-8.615850e-47
Msa0200650	Msa1072900	0.811248	7.699477e-51	-8.615850e-47
Msa0200650	Msa1077070	0.800928	1.145054e-48	-8.615850e-47
Msa0200650	Msa1077340	0.818561	1.837888e-52	-8.615850e-47
Msa0200650	Msa1080330	-0.814294	1.657494e-51	-8.615850e-47
Msa0200650	Msa1081220	0.816034	6.809652e-52	-8.615850e-47
Msa0200650	Msa1081240	0.803945	2.735412e-49	-8.615850e-47
Msa0200650	Msa1081790	-0.805186	1.507468e-49	-8.615850e-47
Msa0200650	Msa1096060	0.839796	1.278948e-57	-8.615850e-47
Msa0200650	Msa1098270	0.809030	2.314481e-50	-8.615850e-47
Msa0200650	Msa1115280	0.809144	2.187740e-50	-8.615850e-47
Msa0200650	Msa1127430	0.839724	1.335180e-57	-8.615850e-47
Msa0200650	Msa1128330	0.831628	1.498535e-55	-8.615850e-47
Msa0200650	Msa1130400	0.821365	4.197436e-53	-8.615850e-47
Msa0200650	Msa1130530	0.829463	5.075421e-55	-8.615850e-47
Msa0200650	Msa1143020	0.845926	2.994771e-59	-8.615850e-47
Msa0200650	Msa1156150	-0.814403	1.568601e-51	-8.615850e-47
Msa0200650	Msa1164020	0.810682	1.020787e-50	-8.615850e-47
Msa0200650	Msa1165220	0.818690	1.718599e-52	-8.615850e-47
Msa0200650	Msa1177780	0.838924	2.153263e-57	-8.615850e-47
Msa0200650	Msa1188710	0.807541	4.806251e-50	-8.615850e-47
Msa0200650	Msa1205590	0.810439	1.152002e-50	-8.615850e-47
Msa0200650	Msa1207350	0.842967	1.870986e-58	-8.615850e-47
Msa0200650	Msa1209190	0.808784	2.612210e-50	-8.615850e-47
Msa0200650	Msa1209670	0.819910	9.060354e-53	-8.615850e-47
Msa0200650	Msa1211350	0.811115	8.225059e-51	-8.615850e-47
Msa0200650	Msa1221330	0.811095	8.308694e-51	-8.615850e-47
Msa0200650	Msa1223870	0.823516	1.328076e-53	-8.615850e-47
Msa0200650	Msa1225200	0.803000	4.296159e-49	-8.615850e-47
Msa0200650	Msa1225600	0.824749	6.818610e-54	-8.615850e-47
Msa0200650	Msa1241570	0.800733	1.255113e-48	-8.615850e-47
Msa0200650	Msa1242940	0.801062	1.074697e-48	-8.615850e-47
Msa0200650	Msa1250110	0.829000	6.573990e-55	-8.615850e-47
Msa0200650	Msa1250730	0.838195	3.320845e-57	-8.615850e-47
Msa0200650	Msa1262010	0.817934	2.549055e-52	-8.615850e-47
Msa0200650	Msa1263060	0.805188	1.505639e-49	-8.615850e-47
Msa0200650	Msa1270660	0.819914	9.044122e-53	-8.615850e-47
Msa0200650	Msa1270730	0.821821	3.293615e-53	-8.615850e-47
Msa0200650	Msa1286550	0.806259	8.972374e-50	-8.615850e-47
Msa0200650	Msa1288450	0.811715	6.094689e-51	-8.615850e-47
Msa0200650	Msa1295330	0.816757	4.691860e-52	-8.615850e-47
Msa0200650	Msa1297530	0.820486	6.687889e-53	-8.615850e-47
Msa0200650	Msa1304940	0.804600	1.998216e-49	-8.615850e-47
Msa0200650	Msa1307550	0.829006	6.553131e-55	-8.615850e-47
Msa0200650	Msa1319820	0.816090	6.613951e-52	-8.615850e-47
Msa0200650	Msa1329800	0.833216	6.056165e-56	-8.615850e-47
Msa0200650	Msa1330180	0.808323	3.276269e-50	-8.615850e-47
Msa0200650	Msa1330780	0.801300	9.611054e-49	-8.615850e-47
Msa0200650	Msa1332050	0.827246	1.739707e-54	-8.615850e-47
Msa0200650	Msa1335230	0.803578	3.261022e-49	-8.615850e-47
Msa0200650	Msa1336040	0.836625	8.388315e-57	-8.615850e-47
Msa0200650	Msa1337170	0.805228	1.477038e-49	-8.615850e-47
Msa0200650	Msa1337480	0.801084	1.063920e-48	-8.615850e-47
Msa0200650	Msa1339190	0.808404	3.149419e-50	-8.615850e-47
Msa0200650	Msa1341490	0.820229	7.659608e-53	-8.615850e-47
Msa0200650	Msa1349450	0.848321	6.604601e-60	-8.615850e-47
Msa0200650	Msa1359320	0.802216	6.233689e-49	-8.615850e-47
Msa0200650	Msa1359920	0.807720	4.403812e-50	-8.615850e-47
Msa0200650	Msa1366300	0.848806	4.846642e-60	-8.615850e-47
Msa0200650	Msa1370590	0.807335	5.316409e-50	-8.615850e-47
Msa0200650	Msa1371240	0.802321	5.931120e-49	-8.615850e-47
Msa0200650	Msa1372150	0.818344	2.058132e-52	-8.615850e-47
Msa0200650	Msa1372290	0.820645	6.149670e-53	-8.615850e-47
Msa0200650	Msa1378410	0.804065	2.583126e-49	-8.615850e-47
Msa0200650	Msa1379590	0.807222	5.615290e-50	-8.615850e-47
Msa0200650	Msa1379850	0.834691	2.588693e-56	-8.615850e-47
Msa0200650	Msa1382020	0.811708	6.116445e-51	-8.615850e-47
Msa0200650	Msa1384100	0.808568	2.905981e-50	-8.615850e-47
Msa0200650	Msa1398890	0.800566	1.357013e-48	-8.615850e-47
Msa0200650	Msa1400120	0.836132	1.119290e-56	-8.615850e-47
Msa0200650	Msa1401270	0.846878	1.647092e-59	-8.615850e-47
Msa0200650	Msa1408050	0.802699	4.957362e-49	-8.615850e-47
Msa0200650	Msa1416260	0.814842	1.253726e-51	-8.615850e-47
Msa0200650	Msa1421990	0.824623	7.300852e-54	-8.615850e-47
Msa0200650	Msa1424640	0.805603	1.232738e-49	-8.615850e-47
Msa0200650	Msa1426570	0.828948	6.767523e-55	-8.615850e-47
Msa0200650	Msa1426710	0.801583	8.409841e-49	-8.615850e-47
Msa0200650	Msa1426910	0.810801	9.623404e-51	-8.615850e-47
Msa0200650	Msa1428780	0.817447	3.282212e-52	-8.615850e-47
Msa0200650	Msa1430130	0.807363	5.243822e-50	-8.615850e-47
Msa0200650	Msa1432130	0.805301	1.426419e-49	-8.615850e-47
Msa0200650	Msa1433220	0.854302	1.347265e-61	-8.615850e-47
Msa0200650	Msa1437330	0.800246	1.576690e-48	-8.615850e-47
Msa0200650	Msa1442790	0.862572	4.609328e-64	-8.615850e-47
Msa0200650	Msa1444120	0.815123	1.086147e-51	-8.615850e-47
Msa0200650	Msa1446080	0.831456	1.652598e-55	-8.615850e-47
Msa0200650	Msa1447150	0.803853	2.858428e-49	-8.615850e-47
Msa0200650	Msa1454960	0.807765	4.307703e-50	-8.615850e-47
Msa0200650	Msa1456230	0.824880	6.350551e-54	-8.615850e-47
Msa0200650	Msa1458340	0.830756	2.454590e-55	-8.615850e-47
Msa0200650	Msa1460750	0.806865	6.684825e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0200650	MtrunA17_Chr2g0296431	97.664	214	5	0	1	214	1	214	8.34e-140	389

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0200650	AT4G20260.8	61.326	181	58	2	1	171	1	179	2.16e-55	176
Msa0200650	AT4G20260.1	61.326	181	58	2	1	171	1	179	2.16e-55	176
Msa0200650	AT4G20260.3	61.326	181	58	2	1	171	1	179	2.16e-55	176
Msa0200650	AT4G20260.2	61.326	181	58	2	1	171	1	179	2.16e-55	176
Msa0200650	AT4G20260.9	61.326	181	58	2	1	171	1	179	2.16e-55	176
Msa0200650	AT4G20260.7	61.326	181	58	2	1	171	1	179	2.16e-55	176
Msa0200650	AT4G20260.10	61.326	181	58	2	1	171	1	179	2.16e-55	176
Msa0200650	AT4G20260.6	68.243	148	43	2	1	145	1	147	3.00e-54	171
Msa0200650	AT4G20260.4	60.989	182	58	3	1	171	1	180	1.12e-53	172
Msa0200650	AT4G20260.5	67.857	140	45	0	1	140	1	140	1.13e-53	170

Find 50 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATAGAAGAACTTGTTAAAAT+TGG	0.213794	2_1:+20930348	Msa0200650:CDS
TGTGAAAATGTGAATGTTTA+TGG	0.239691	2_1:+20930945	Msa0200650:three_prime_UTR
AGTTGTTGAAGAAGAGAAAA+AGG	0.260064	2_1:+20930645	Msa0200650:CDS
TTTGGACCAGCCTTAGTTTC+AGG	0.262260	2_1:+20930496	Msa0200650:CDS
TATGTCTGTGGTGCTTATTT+TGG	0.313228	2_1:+20929510	Msa0200650:five_prime_UTR
TCCTCCTTCCGCGGAGAAAC+AGG	0.321981	2_1:+20930735	Msa0200650:CDS
AAAGGAAAATAAAGCAAAAC+AGG	0.336266	2_1:-20931096	None:intergenic
AAGCAAAACAGGGACATATA+TGG	0.360009	2_1:-20931085	None:intergenic
TCAACAAACTTTCAAGCCTT+TGG	0.364448	2_1:-20930802	None:intergenic
CTTTGACTCATCAAAGGTCT+TGG	0.366152	2_1:-20929711	None:intergenic
GGAAGCAAAAGATGGGTTAC+TGG	0.373360	2_1:+20929612	Msa0200650:exon
TCAACTGCAGCCGGCTCAAC+CGG	0.383238	2_1:-20930766	None:intergenic
ATATGAAACAACAAACATAA+AGG	0.405905	2_1:-20931048	None:intergenic
TCTGAAGCATCATCCAAGTT+TGG	0.412649	2_1:+20930478	Msa0200650:CDS
TCCTCCTGTTTCTCCGCGGA+AGG	0.422803	2_1:-20930739	None:intergenic
AAACATTTGGAAGCAAAAGA+TGG	0.424068	2_1:+20929604	Msa0200650:exon
AATTGAATCTTCTGCAGAAA+AGG	0.424490	2_1:+20930684	Msa0200650:CDS
TGCAGAAAAGGTTGAAGAAA+AGG	0.428765	2_1:+20930696	Msa0200650:CDS
GTTATAAGAACTCAAGGTTA+AGG	0.434726	2_1:+20929569	Msa0200650:five_prime_UTR
GAAAACTGGACCTGAAACTA+AGG	0.436909	2_1:-20930506	None:intergenic
GGGAATCAATAAAGAGTTTG+AGG	0.437077	2_1:+20929906	Msa0200650:CDS
AACTAAGGCTGGTCCAAACT+TGG	0.441827	2_1:-20930491	None:intergenic
TTGTCAAGGAATTGTGACTT+TGG	0.469481	2_1:+20931001	Msa0200650:three_prime_UTR
CAAGACCTTTGATGAGTCAA+AGG	0.477303	2_1:+20929712	Msa0200650:CDS
GCATGGTGTGTGTGCTGGAA+TGG	0.482118	2_1:+20929446	Msa0200650:five_prime_UTR
AAGGAATTGTGACTTTGGAT+TGG	0.488861	2_1:+20931006	Msa0200650:three_prime_UTR
AGCATCTTCAACTGAAATCA+AGG	0.494963	2_1:+20929972	Msa0200650:CDS
ATTATGCATGGTGTGTGTGC+TGG	0.506644	2_1:+20929441	Msa0200650:five_prime_UTR
AGAAAAGGATGCAGCTGAGC+CGG	0.507989	2_1:+20930711	Msa0200650:CDS
TCTACTTGTTCAACTGCAGC+CGG	0.508607	2_1:-20930775	None:intergenic
TCCTGTTTCTCCGCGGAAGG+AGG	0.515010	2_1:-20930736	None:intergenic
TTCTCCGCGGAAGGAGGAGC+CGG	0.519506	2_1:-20930730	None:intergenic
ACAAACTTTCAAGCCTTTGG+TGG	0.520637	2_1:-20930799	None:intergenic
TTGATAGTTATAAGAACTCA+AGG	0.524120	2_1:+20929563	Msa0200650:five_prime_UTR
GTCAAAGAACGTGATGTAGC+AGG	0.529799	2_1:+20930291	Msa0200650:CDS
GGTTCTTCCCAAGATCAAGA+AGG	0.544230	2_1:+20929643	Msa0200650:CDS
AACATTTGGAAGCAAAAGAT+GGG	0.550046	2_1:+20929605	Msa0200650:exon
AAACAAGTGGTGTTAAAGAG+AGG	0.557539	2_1:+20930617	Msa0200650:CDS
TAAGAAAACAGCTGCTGCTG+AGG	0.571062	2_1:+20929685	Msa0200650:CDS
AACAAGTGGTGTTAAAGAGA+GGG	0.574339	2_1:+20930618	Msa0200650:CDS
ACAAACCTTTGACTCATCAA+AGG	0.584760	2_1:-20929717	None:intergenic
TGTACATTTGGAATTATGCA+TGG	0.588466	2_1:+20929429	None:intergenic
ACTGGACCTGAAACTAAGGC+TGG	0.610443	2_1:-20930502	None:intergenic
TCCTTCCGCGGAGAAACAGG+AGG	0.613705	2_1:+20930738	Msa0200650:CDS
AAAACAGAAGATGAAACAAG+TGG	0.618986	2_1:+20930604	Msa0200650:CDS
TGAGCCGGCTCCTCCTTCCG+CGG	0.652057	2_1:+20930726	Msa0200650:CDS
TGAACAAGTAGAACCACCAA+AGG	0.665776	2_1:+20930786	Msa0200650:CDS
TATATGTATATGTATGTCTG+TGG	0.676872	2_1:+20929498	Msa0200650:five_prime_UTR
GATGGGTTACTGGACAACAA+AGG	0.677203	2_1:+20929622	Msa0200650:exon
AAGGAAAATAAAGCAAAACA+GGG	0.712132	2_1:-20931095	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAAGTTTTTATAACATTGT+AGG	-	chr2_1:20929474-20929493	None:intergenic	15.0%
!!!	TTTGCTTTTATATTTTGTTA+CGG	-	chr2_1:20930077-20930096	None:intergenic	15.0%
!!	AAGCAAAAAATATATGTATA+TGG	+	chr2_1:20930090-20930109	Msa0200650:intron	15.0%
!!	TCTTCAAAAATAAACAAATA+AGG	-	chr2_1:20930399-20930418	None:intergenic	15.0%
!!!	AAAAGTTTTTATAACATTGT+AGG	-	chr2_1:20929474-20929493	None:intergenic	15.0%
!!!	TTTGCTTTTATATTTTGTTA+CGG	-	chr2_1:20930077-20930096	None:intergenic	15.0%
!!	AAGCAAAAAATATATGTATA+TGG	+	chr2_1:20930090-20930109	Msa0200650:intron	15.0%
!!	TCTTCAAAAATAAACAAATA+AGG	-	chr2_1:20930399-20930418	None:intergenic	15.0%
!!	AATAGTTCATATATTTGATG+TGG	+	chr2_1:20929864-20929883	Msa0200650:intron	20.0%
!!	AAGTAAAAATATCATGTATG+TGG	-	chr2_1:20930173-20930192	None:intergenic	20.0%
!!!	TGAAAATTTTCCATCAATAT+TGG	-	chr2_1:20930250-20930269	None:intergenic	20.0%
!!!	ATAGAAGAACTTGTTAAAAT+TGG	+	chr2_1:20930348-20930367	Msa0200650:CDS	20.0%
!!!	GTAAAGTATTTATAGTTTTC+CGG	+	chr2_1:20930370-20930389	Msa0200650:intron	20.0%
!!!	ATATATATTTCAGATTTTCC+TGG	+	chr2_1:20930442-20930461	Msa0200650:intron	20.0%
!!!	CATTTTTCATTTTATTGTCA+AGG	+	chr2_1:20930987-20931006	Msa0200650:three_prime_UTR	20.0%
!!	ATATGAAACAACAAACATAA+AGG	-	chr2_1:20931051-20931070	None:intergenic	20.0%
!!	AATAGTTCATATATTTGATG+TGG	+	chr2_1:20929864-20929883	Msa0200650:intron	20.0%
!!	AAGTAAAAATATCATGTATG+TGG	-	chr2_1:20930173-20930192	None:intergenic	20.0%
!!!	TGAAAATTTTCCATCAATAT+TGG	-	chr2_1:20930250-20930269	None:intergenic	20.0%
!!!	ATAGAAGAACTTGTTAAAAT+TGG	+	chr2_1:20930348-20930367	Msa0200650:CDS	20.0%
!!!	GTAAAGTATTTATAGTTTTC+CGG	+	chr2_1:20930370-20930389	Msa0200650:intron	20.0%
!!!	ATATATATTTCAGATTTTCC+TGG	+	chr2_1:20930442-20930461	Msa0200650:intron	20.0%
!!!	CATTTTTCATTTTATTGTCA+AGG	+	chr2_1:20930987-20931006	Msa0200650:three_prime_UTR	20.0%
!!	ATATGAAACAACAAACATAA+AGG	-	chr2_1:20931051-20931070	None:intergenic	20.0%
!	TATATGTATATGTATGTCTG+TGG	+	chr2_1:20929498-20929517	Msa0200650:five_prime_UTR	25.0%
!!	TTGATAGTTATAAGAACTCA+AGG	+	chr2_1:20929563-20929582	Msa0200650:five_prime_UTR	25.0%
!	TTCATATATTTGATGTGGTT+CGG	+	chr2_1:20929869-20929888	Msa0200650:intron	25.0%
!!	CTTTTATATTTTGTTACGGA+GGG	-	chr2_1:20930073-20930092	None:intergenic	25.0%
!	ACATGTATCTGGTTAAAATT+TGG	+	chr2_1:20930146-20930165	Msa0200650:intron	25.0%
!	CATGTATCTGGTTAAAATTT+GGG	+	chr2_1:20930147-20930166	Msa0200650:intron	25.0%
!	AAATAAACAAATAAGGTTGC+CGG	-	chr2_1:20930392-20930411	None:intergenic	25.0%
!	TTCTCAAAAACAAAGAAAAC+TGG	-	chr2_1:20930523-20930542	None:intergenic	25.0%
!!!	AGTTTTCTTTGTTTTTGAGA+AGG	+	chr2_1:20930522-20930541	Msa0200650:CDS	25.0%
!	TGTGAAAATGTGAATGTTTA+TGG	+	chr2_1:20930945-20930964	Msa0200650:three_prime_UTR	25.0%
!	TATATGTATATGTATGTCTG+TGG	+	chr2_1:20929498-20929517	Msa0200650:five_prime_UTR	25.0%
!!	TTGATAGTTATAAGAACTCA+AGG	+	chr2_1:20929563-20929582	Msa0200650:five_prime_UTR	25.0%
!	TTCATATATTTGATGTGGTT+CGG	+	chr2_1:20929869-20929888	Msa0200650:intron	25.0%
!!	CTTTTATATTTTGTTACGGA+GGG	-	chr2_1:20930073-20930092	None:intergenic	25.0%
!	ACATGTATCTGGTTAAAATT+TGG	+	chr2_1:20930146-20930165	Msa0200650:intron	25.0%
!	CATGTATCTGGTTAAAATTT+GGG	+	chr2_1:20930147-20930166	Msa0200650:intron	25.0%
!	AAATAAACAAATAAGGTTGC+CGG	-	chr2_1:20930392-20930411	None:intergenic	25.0%
!	TTCTCAAAAACAAAGAAAAC+TGG	-	chr2_1:20930523-20930542	None:intergenic	25.0%
!!!	AGTTTTCTTTGTTTTTGAGA+AGG	+	chr2_1:20930522-20930541	Msa0200650:CDS	25.0%
!	TGTGAAAATGTGAATGTTTA+TGG	+	chr2_1:20930945-20930964	Msa0200650:three_prime_UTR	25.0%
	GTTATAAGAACTCAAGGTTA+AGG	+	chr2_1:20929569-20929588	Msa0200650:five_prime_UTR	30.0%
!!!	TTCCAAATGTTTTTTCTCTG+TGG	-	chr2_1:20929596-20929615	None:intergenic	30.0%
	AAACATTTGGAAGCAAAAGA+TGG	+	chr2_1:20929604-20929623	Msa0200650:exon	30.0%
	AACATTTGGAAGCAAAAGAT+GGG	+	chr2_1:20929605-20929624	Msa0200650:exon	30.0%
	TCAAAAACCTTCTTGATCTT+GGG	-	chr2_1:20929653-20929672	None:intergenic	30.0%
!	GCTTTTATATTTTGTTACGG+AGG	-	chr2_1:20930074-20930093	None:intergenic	30.0%
	TTAGACTAGATACATGTATC+TGG	+	chr2_1:20930135-20930154	Msa0200650:intron	30.0%
	GAAAAAGACACCAATATTGA+TGG	+	chr2_1:20930237-20930256	Msa0200650:intron	30.0%
	AATATCACCTTTACAGAGTT+TGG	+	chr2_1:20930269-20930288	Msa0200650:intron	30.0%
	AAAACAGAAGATGAAACAAG+TGG	+	chr2_1:20930604-20930623	Msa0200650:CDS	30.0%
	AGTTGTTGAAGAAGAGAAAA+AGG	+	chr2_1:20930645-20930664	Msa0200650:CDS	30.0%
	AATTGAATCTTCTGCAGAAA+AGG	+	chr2_1:20930684-20930703	Msa0200650:CDS	30.0%
	GTTATAAGAACTCAAGGTTA+AGG	+	chr2_1:20929569-20929588	Msa0200650:five_prime_UTR	30.0%
!!!	TTCCAAATGTTTTTTCTCTG+TGG	-	chr2_1:20929596-20929615	None:intergenic	30.0%
	AAACATTTGGAAGCAAAAGA+TGG	+	chr2_1:20929604-20929623	Msa0200650:exon	30.0%
	AACATTTGGAAGCAAAAGAT+GGG	+	chr2_1:20929605-20929624	Msa0200650:exon	30.0%
	TCAAAAACCTTCTTGATCTT+GGG	-	chr2_1:20929653-20929672	None:intergenic	30.0%
!	GCTTTTATATTTTGTTACGG+AGG	-	chr2_1:20930074-20930093	None:intergenic	30.0%
	TTAGACTAGATACATGTATC+TGG	+	chr2_1:20930135-20930154	Msa0200650:intron	30.0%
	GAAAAAGACACCAATATTGA+TGG	+	chr2_1:20930237-20930256	Msa0200650:intron	30.0%
	AATATCACCTTTACAGAGTT+TGG	+	chr2_1:20930269-20930288	Msa0200650:intron	30.0%
	AAAACAGAAGATGAAACAAG+TGG	+	chr2_1:20930604-20930623	Msa0200650:CDS	30.0%
	AGTTGTTGAAGAAGAGAAAA+AGG	+	chr2_1:20930645-20930664	Msa0200650:CDS	30.0%
	AATTGAATCTTCTGCAGAAA+AGG	+	chr2_1:20930684-20930703	Msa0200650:CDS	30.0%
!	TATGTCTGTGGTGCTTATTT+TGG	+	chr2_1:20929510-20929529	Msa0200650:five_prime_UTR	35.0%
	GACCACAGAGAAAAAACATT+TGG	+	chr2_1:20929591-20929610	Msa0200650:five_prime_UTR	35.0%
	CTCAAAAACCTTCTTGATCT+TGG	-	chr2_1:20929654-20929673	None:intergenic	35.0%
	ACAAACCTTTGACTCATCAA+AGG	-	chr2_1:20929720-20929739	None:intergenic	35.0%
!!!	TGTGGTTCGGTATTTTGTTT+AGG	+	chr2_1:20929882-20929901	Msa0200650:intron	35.0%
!!	GTTCGGTATTTTGTTTAGGA+GGG	+	chr2_1:20929886-20929905	Msa0200650:intron	35.0%
	GGGAATCAATAAAGAGTTTG+AGG	+	chr2_1:20929906-20929925	Msa0200650:CDS	35.0%
	AGCATCTTCAACTGAAATCA+AGG	+	chr2_1:20929972-20929991	Msa0200650:CDS	35.0%
	TCTTTGACCAAACTCTGTAA+AGG	-	chr2_1:20930279-20930298	None:intergenic	35.0%
!!!	GTTTTTGTTTCTGTAGTAGC+AGG	-	chr2_1:20930589-20930608	None:intergenic	35.0%
!	AAACAAGTGGTGTTAAAGAG+AGG	+	chr2_1:20930617-20930636	Msa0200650:CDS	35.0%
!	AACAAGTGGTGTTAAAGAGA+GGG	+	chr2_1:20930618-20930637	Msa0200650:CDS	35.0%
	TGCAGAAAAGGTTGAAGAAA+AGG	+	chr2_1:20930696-20930715	Msa0200650:CDS	35.0%
	TCAACAAACTTTCAAGCCTT+TGG	-	chr2_1:20930805-20930824	None:intergenic	35.0%
	TTGTCAAGGAATTGTGACTT+TGG	+	chr2_1:20931001-20931020	Msa0200650:three_prime_UTR	35.0%
	AAGGAATTGTGACTTTGGAT+TGG	+	chr2_1:20931006-20931025	Msa0200650:three_prime_UTR	35.0%
	AAGCAAAACAGGGACATATA+TGG	-	chr2_1:20931088-20931107	None:intergenic	35.0%
!	TATGTCCCTGTTTTGCTTTA+TGG	+	chr2_1:20931090-20931109	Msa0200650:three_prime_UTR	35.0%
!	TATGTCTGTGGTGCTTATTT+TGG	+	chr2_1:20929510-20929529	Msa0200650:five_prime_UTR	35.0%
	GACCACAGAGAAAAAACATT+TGG	+	chr2_1:20929591-20929610	Msa0200650:five_prime_UTR	35.0%
	CTCAAAAACCTTCTTGATCT+TGG	-	chr2_1:20929654-20929673	None:intergenic	35.0%
	ACAAACCTTTGACTCATCAA+AGG	-	chr2_1:20929720-20929739	None:intergenic	35.0%
!!!	TGTGGTTCGGTATTTTGTTT+AGG	+	chr2_1:20929882-20929901	Msa0200650:intron	35.0%
!!	GTTCGGTATTTTGTTTAGGA+GGG	+	chr2_1:20929886-20929905	Msa0200650:intron	35.0%
	GGGAATCAATAAAGAGTTTG+AGG	+	chr2_1:20929906-20929925	Msa0200650:CDS	35.0%
	AGCATCTTCAACTGAAATCA+AGG	+	chr2_1:20929972-20929991	Msa0200650:CDS	35.0%
	TCTTTGACCAAACTCTGTAA+AGG	-	chr2_1:20930279-20930298	None:intergenic	35.0%
!!!	GTTTTTGTTTCTGTAGTAGC+AGG	-	chr2_1:20930589-20930608	None:intergenic	35.0%
!	AAACAAGTGGTGTTAAAGAG+AGG	+	chr2_1:20930617-20930636	Msa0200650:CDS	35.0%
!	AACAAGTGGTGTTAAAGAGA+GGG	+	chr2_1:20930618-20930637	Msa0200650:CDS	35.0%
	TGCAGAAAAGGTTGAAGAAA+AGG	+	chr2_1:20930696-20930715	Msa0200650:CDS	35.0%
	TCAACAAACTTTCAAGCCTT+TGG	-	chr2_1:20930805-20930824	None:intergenic	35.0%
	TTGTCAAGGAATTGTGACTT+TGG	+	chr2_1:20931001-20931020	Msa0200650:three_prime_UTR	35.0%
	AAGGAATTGTGACTTTGGAT+TGG	+	chr2_1:20931006-20931025	Msa0200650:three_prime_UTR	35.0%
	AAGCAAAACAGGGACATATA+TGG	-	chr2_1:20931088-20931107	None:intergenic	35.0%
!!!	GCTTATTTTGGAGAGACAAG+TGG	+	chr2_1:20929522-20929541	Msa0200650:five_prime_UTR	40.0%
	CTTTGACTCATCAAAGGTCT+TGG	-	chr2_1:20929714-20929733	None:intergenic	40.0%
	CAAGACCTTTGATGAGTCAA+AGG	+	chr2_1:20929712-20929731	Msa0200650:CDS	40.0%
!!	GGTTCGGTATTTTGTTTAGG+AGG	+	chr2_1:20929885-20929904	Msa0200650:intron	40.0%
!!	TCAGATACTGCTTTTGATCC+AGG	-	chr2_1:20930463-20930482	None:intergenic	40.0%
!	TCTGAAGCATCATCCAAGTT+TGG	+	chr2_1:20930478-20930497	Msa0200650:CDS	40.0%
	GAAAACTGGACCTGAAACTA+AGG	-	chr2_1:20930509-20930528	None:intergenic	40.0%
	TGAACAAGTAGAACCACCAA+AGG	+	chr2_1:20930786-20930805	Msa0200650:CDS	40.0%
	ACAAACTTTCAAGCCTTTGG+TGG	-	chr2_1:20930802-20930821	None:intergenic	40.0%
!!!	GCTTATTTTGGAGAGACAAG+TGG	+	chr2_1:20929522-20929541	Msa0200650:five_prime_UTR	40.0%
	CTTTGACTCATCAAAGGTCT+TGG	-	chr2_1:20929714-20929733	None:intergenic	40.0%
	CAAGACCTTTGATGAGTCAA+AGG	+	chr2_1:20929712-20929731	Msa0200650:CDS	40.0%
!!	GGTTCGGTATTTTGTTTAGG+AGG	+	chr2_1:20929885-20929904	Msa0200650:intron	40.0%
!!	TCAGATACTGCTTTTGATCC+AGG	-	chr2_1:20930463-20930482	None:intergenic	40.0%
!	TCTGAAGCATCATCCAAGTT+TGG	+	chr2_1:20930478-20930497	Msa0200650:CDS	40.0%
	GAAAACTGGACCTGAAACTA+AGG	-	chr2_1:20930509-20930528	None:intergenic	40.0%
	TGAACAAGTAGAACCACCAA+AGG	+	chr2_1:20930786-20930805	Msa0200650:CDS	40.0%
	ACAAACTTTCAAGCCTTTGG+TGG	-	chr2_1:20930802-20930821	None:intergenic	40.0%
	ATTATGCATGGTGTGTGTGC+TGG	+	chr2_1:20929441-20929460	Msa0200650:five_prime_UTR	45.0%
!!	GGAAGCAAAAGATGGGTTAC+TGG	+	chr2_1:20929612-20929631	Msa0200650:exon	45.0%
!!	GATGGGTTACTGGACAACAA+AGG	+	chr2_1:20929622-20929641	Msa0200650:exon	45.0%
	GGTTCTTCCCAAGATCAAGA+AGG	+	chr2_1:20929643-20929662	Msa0200650:CDS	45.0%
	TAAGAAAACAGCTGCTGCTG+AGG	+	chr2_1:20929685-20929704	Msa0200650:CDS	45.0%
	GTCAAAGAACGTGATGTAGC+AGG	+	chr2_1:20930291-20930310	Msa0200650:CDS	45.0%
!	AACTAAGGCTGGTCCAAACT+TGG	-	chr2_1:20930494-20930513	None:intergenic	45.0%
	TTTGGACCAGCCTTAGTTTC+AGG	+	chr2_1:20930496-20930515	Msa0200650:CDS	45.0%
!!	TTTTTCCTCCTGTTTCTCCG+CGG	-	chr2_1:20930746-20930765	None:intergenic	45.0%
	GGAGAAACAGGAGGAAAAAC+CGG	+	chr2_1:20930747-20930766	Msa0200650:CDS	45.0%
	TCTACTTGTTCAACTGCAGC+CGG	-	chr2_1:20930778-20930797	None:intergenic	45.0%
	ATTATGCATGGTGTGTGTGC+TGG	+	chr2_1:20929441-20929460	Msa0200650:five_prime_UTR	45.0%
!!	GGAAGCAAAAGATGGGTTAC+TGG	+	chr2_1:20929612-20929631	Msa0200650:exon	45.0%
!!	GATGGGTTACTGGACAACAA+AGG	+	chr2_1:20929622-20929641	Msa0200650:exon	45.0%
	GGTTCTTCCCAAGATCAAGA+AGG	+	chr2_1:20929643-20929662	Msa0200650:CDS	45.0%
	TAAGAAAACAGCTGCTGCTG+AGG	+	chr2_1:20929685-20929704	Msa0200650:CDS	45.0%
	GTCAAAGAACGTGATGTAGC+AGG	+	chr2_1:20930291-20930310	Msa0200650:CDS	45.0%
!	AACTAAGGCTGGTCCAAACT+TGG	-	chr2_1:20930494-20930513	None:intergenic	45.0%
	TTTGGACCAGCCTTAGTTTC+AGG	+	chr2_1:20930496-20930515	Msa0200650:CDS	45.0%
!!	TTTTTCCTCCTGTTTCTCCG+CGG	-	chr2_1:20930746-20930765	None:intergenic	45.0%
	GGAGAAACAGGAGGAAAAAC+CGG	+	chr2_1:20930747-20930766	Msa0200650:CDS	45.0%
	TCTACTTGTTCAACTGCAGC+CGG	-	chr2_1:20930778-20930797	None:intergenic	45.0%
	ACTGGACCTGAAACTAAGGC+TGG	-	chr2_1:20930505-20930524	None:intergenic	50.0%
	AGAAAAGGATGCAGCTGAGC+CGG	+	chr2_1:20930711-20930730	Msa0200650:CDS	50.0%
	ACTGGACCTGAAACTAAGGC+TGG	-	chr2_1:20930505-20930524	None:intergenic	50.0%
	AGAAAAGGATGCAGCTGAGC+CGG	+	chr2_1:20930711-20930730	Msa0200650:CDS	50.0%
	GCATGGTGTGTGTGCTGGAA+TGG	+	chr2_1:20929446-20929465	Msa0200650:five_prime_UTR	55.0%
	GGAGGAAAAACCGGTTGAGC+CGG	+	chr2_1:20930756-20930775	Msa0200650:CDS	55.0%
	GCATGGTGTGTGTGCTGGAA+TGG	+	chr2_1:20929446-20929465	Msa0200650:five_prime_UTR	55.0%
	GGAGGAAAAACCGGTTGAGC+CGG	+	chr2_1:20930756-20930775	Msa0200650:CDS	55.0%
	TCCTCCTTCCGCGGAGAAAC+AGG	+	chr2_1:20930735-20930754	Msa0200650:CDS	60.0%
!	TCCTGTTTCTCCGCGGAAGG+AGG	-	chr2_1:20930739-20930758	None:intergenic	60.0%
	TCCTTCCGCGGAGAAACAGG+AGG	+	chr2_1:20930738-20930757	Msa0200650:CDS	60.0%
!	TCCTCCTGTTTCTCCGCGGA+AGG	-	chr2_1:20930742-20930761	None:intergenic	60.0%
!	TCAACTGCAGCCGGCTCAAC+CGG	-	chr2_1:20930769-20930788	None:intergenic	60.0%
	TCCTCCTTCCGCGGAGAAAC+AGG	+	chr2_1:20930735-20930754	Msa0200650:CDS	60.0%
!	TCCTGTTTCTCCGCGGAAGG+AGG	-	chr2_1:20930739-20930758	None:intergenic	60.0%
	TCCTTCCGCGGAGAAACAGG+AGG	+	chr2_1:20930738-20930757	Msa0200650:CDS	60.0%
!	TCCTCCTGTTTCTCCGCGGA+AGG	-	chr2_1:20930742-20930761	None:intergenic	60.0%
!	TCAACTGCAGCCGGCTCAAC+CGG	-	chr2_1:20930769-20930788	None:intergenic	60.0%
	TTCTCCGCGGAAGGAGGAGC+CGG	-	chr2_1:20930733-20930752	None:intergenic	65.0%
	TTCTCCGCGGAAGGAGGAGC+CGG	-	chr2_1:20930733-20930752	None:intergenic	65.0%
!	TGAGCCGGCTCCTCCTTCCG+CGG	+	chr2_1:20930726-20930745	Msa0200650:CDS	70.0%
!	TGAGCCGGCTCCTCCTTCCG+CGG	+	chr2_1:20930726-20930745	Msa0200650:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_1	gene	20929437	20931109	20929437	ID=Msa0200650;Name=Msa0200650
chr2_1	mRNA	20929437	20931109	20929437	ID=Msa0200650-mRNA-1;Parent=Msa0200650;Name=Msa0200650-mRNA-1;_AED=0.04;_eAED=0.04;_QI=186\|1\|1\|1\|1\|1\|4\|296\|214
chr2_1	exon	20929437	20929733	20929437	ID=Msa0200650-mRNA-1:exon:8556;Parent=Msa0200650-mRNA-1
chr2_1	exon	20929904	20929993	20929904	ID=Msa0200650-mRNA-1:exon:8557;Parent=Msa0200650-mRNA-1
chr2_1	exon	20930285	20930369	20930285	ID=Msa0200650-mRNA-1:exon:8558;Parent=Msa0200650-mRNA-1
chr2_1	exon	20930455	20931109	20930455	ID=Msa0200650-mRNA-1:exon:8559;Parent=Msa0200650-mRNA-1
chr2_1	five_prime_UTR	20929437	20929622	20929437	ID=Msa0200650-mRNA-1:five_prime_utr;Parent=Msa0200650-mRNA-1
chr2_1	CDS	20929623	20929733	20929623	ID=Msa0200650-mRNA-1:cds;Parent=Msa0200650-mRNA-1
chr2_1	CDS	20929904	20929993	20929904	ID=Msa0200650-mRNA-1:cds;Parent=Msa0200650-mRNA-1
chr2_1	CDS	20930285	20930369	20930285	ID=Msa0200650-mRNA-1:cds;Parent=Msa0200650-mRNA-1
chr2_1	CDS	20930455	20930813	20930455	ID=Msa0200650-mRNA-1:cds;Parent=Msa0200650-mRNA-1
chr2_1	three_prime_UTR	20930814	20931109	20930814	ID=Msa0200650-mRNA-1:three_prime_utr;Parent=Msa0200650-mRNA-1

Gene Sequence

>Msa0200650

ATGGGTTACTGGACAACAAAGGTTCTTCCCAAGATCAAGAAGGTTTTTGAGAAGAATAGTACTAAGAAAACAGCTGCTGCTGAGGTTTCCAAGACCTTTGATGAGTCAAAGGAGGGAATCAATAAAGAGTTTGAGGAAAAGAAAACTGAACTTCAAACAAAAGTACTTGCTGTATATGAAGCATCTTCAACTGAAATCAAGAGTTTGGTCAAAGAACGTGATGTAGCAGGTCTAAAGAAGAACTCAACAGAAGCTCACAAATTCATAGAAGAACTTGTTAAAATTGATTTTCCTGGATCAAAAGCAGTATCTGAAGCATCATCCAAGTTTGGACCAGCCTTAGTTTCAGGTCCAGTTTTCTTTGTTTTTGAGAAGGTATCAACTTTCATAGTCACAGAAGAGAAAGTTGAAGAAGCACCTGCTACTACAGAAACAAAAACAGAAGATGAAACAAGTGGTGTTAAAGAGAGGGAAATAGTTGTTGAAGAAGAGAAAAAGGAAGAAACAAGTGAGAAAATTGAATCTTCTGCAGAAAAGGTTGAAGAAAAGGATGCAGCTGAGCCGGCTCCTCCTTCCGCGGAGAAACAGGAGGAAAAACCGGTTGAGCCGGCTGCAGTTGAACAAGTAGAACCACCAAAGGCTTGA

Protein sequence

>Msa0200650

MGYWTTKVLPKIKKVFEKNSTKKTAAAEVSKTFDESKEGINKEFEEKKTELQTKVLAVYEASSTEIKSLVKERDVAGLKKNSTEAHKFIEELVKIDFPGSKAVSEASSKFGPALVSGPVFFVFEKVSTFIVTEEKVEEAPATTETKTEDETSGVKEREIVVEEEKKEETSEKIESSAEKVEEKDAAEPAPPSAEKQEEKPVEPAAVEQVEPPKA*