Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005500 | Msa1034040 | 0.814291 | 1.660671e-51 | -8.615850e-47 |
| Msa0047630 | Msa1034040 | 0.820914 | 5.332035e-53 | -8.615850e-47 |
| Msa0078110 | Msa1034040 | 0.812469 | 4.173749e-51 | -8.615850e-47 |
| Msa0622930 | Msa1034040 | 0.814461 | 1.522849e-51 | -8.615850e-47 |
| Msa0648840 | Msa1034040 | 0.816725 | 4.769344e-52 | -8.615850e-47 |
| Msa0654500 | Msa1034040 | 0.804703 | 1.901850e-49 | -8.615850e-47 |
| Msa0691350 | Msa1034040 | 0.802705 | 4.942482e-49 | -8.615850e-47 |
| Msa0700430 | Msa1034040 | 0.801569 | 8.463490e-49 | -8.615850e-47 |
| Msa0744550 | Msa1034040 | -0.804546 | 2.050991e-49 | -8.615850e-47 |
| Msa0744560 | Msa1034040 | -0.808819 | 2.567938e-50 | -8.615850e-47 |
| Msa0820130 | Msa1034040 | 0.805096 | 1.574395e-49 | -8.615850e-47 |
| Msa0826370 | Msa1034040 | -0.800072 | 1.711185e-48 | -8.615850e-47 |
| Msa0827560 | Msa1034040 | 0.808442 | 3.091176e-50 | -8.615850e-47 |
| Msa0415760 | Msa1034040 | 0.800998 | 1.108003e-48 | -8.615850e-47 |
| Msa0427890 | Msa1034040 | 0.800199 | 1.612406e-48 | -8.615850e-47 |
| Msa0474120 | Msa1034040 | 0.805663 | 1.197386e-49 | -8.615850e-47 |
| Msa0480540 | Msa1034040 | -0.806192 | 9.266855e-50 | -8.615850e-47 |
| Msa0480550 | Msa1034040 | -0.809610 | 1.737884e-50 | -8.615850e-47 |
| Msa1020490 | Msa1034040 | 0.815025 | 1.141997e-51 | -8.615850e-47 |
| Msa1030210 | Msa1034040 | -0.807123 | 5.895331e-50 | -8.615850e-47 |
| Msa1034040 | Msa1057940 | 0.807132 | 5.867537e-50 | -8.615850e-47 |
| Msa1034040 | Msa1069250 | -0.802632 | 5.115647e-49 | -8.615850e-47 |
| Msa1034040 | Msa1144380 | 0.808956 | 2.400479e-50 | -8.615850e-47 |
| Msa1034040 | Msa1154190 | 0.842430 | 2.597942e-58 | -8.615850e-47 |
| Msa1034040 | Msa1174280 | -0.803609 | 3.212429e-49 | -8.615850e-47 |
| Msa1034040 | Msa1202110 | -0.810092 | 1.368972e-50 | -8.615850e-47 |
| Msa1034040 | Msa1211610 | -0.818097 | 2.341930e-52 | -8.615850e-47 |
| Msa1034040 | Msa1235960 | 0.805235 | 1.472409e-49 | -8.615850e-47 |
| Msa1034040 | Msa1235990 | 0.805605 | 1.231382e-49 | -8.615850e-47 |
| Msa1034040 | Msa1239190 | -0.805765 | 1.139747e-49 | -8.615850e-47 |
| Msa1034040 | Msa1254870 | -0.809127 | 2.206187e-50 | -8.615850e-47 |
| Msa1034040 | Msa1264940 | -0.806765 | 7.015769e-50 | -8.615850e-47 |
| Msa1034040 | Msa1299480 | -0.815290 | 9.972757e-52 | -8.615850e-47 |
| Msa1034040 | Msa1316090 | 0.802218 | 6.225566e-49 | -8.615850e-47 |
| Msa1034040 | Msa1328430 | -0.809039 | 2.304343e-50 | -8.615850e-47 |
| Msa1034040 | Msa1395200 | 0.803467 | 3.437810e-49 | -8.615850e-47 |
| Msa1034040 | Msa1410480 | 0.804513 | 2.083832e-49 | -8.615850e-47 |
| Msa1034040 | Msa1424490 | 0.800350 | 1.501790e-48 | -8.615850e-47 |
| Msa0246140 | Msa1034040 | -0.808334 | 3.258652e-50 | -8.615850e-47 |
| Msa0259770 | Msa1034040 | 0.817543 | 3.122369e-52 | -8.615850e-47 |
| Msa0305440 | Msa1034040 | 0.804610 | 1.988665e-49 | -8.615850e-47 |
| Msa0554770 | Msa1034040 | 0.831353 | 1.752011e-55 | -8.615850e-47 |
| Msa0559440 | Msa1034040 | 0.804179 | 2.445716e-49 | -8.615850e-47 |
| Msa0577290 | Msa1034040 | 0.814218 | 1.723466e-51 | -8.615850e-47 |
| Msa0862750 | Msa1034040 | 0.809035 | 2.308394e-50 | -8.615850e-47 |
| Msa0865820 | Msa1034040 | -0.802453 | 5.570941e-49 | -8.615850e-47 |
| Msa0874750 | Msa1034040 | -0.807245 | 5.553765e-50 | -8.615850e-47 |
| Msa0879940 | Msa1034040 | 0.825083 | 5.685646e-54 | -8.615850e-47 |
| Msa0933500 | Msa1034040 | 0.803814 | 2.913184e-49 | -8.615850e-47 |
| Msa0970940 | Msa1034040 | 0.810366 | 1.194658e-50 | -8.615850e-47 |
| Msa0976400 | Msa1034040 | -0.805774 | 1.134994e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 30 sgRNAs with CRISPR-Local
Find 396 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATAACGCTTTCTCTTGTT+TGG | 0.298994 | 7_1:-69433633 | None:intergenic |
| TCCCCTCTCTTTCCCTCCTC+AGG | 0.357387 | 7_1:-69442635 | None:intergenic |
| TTGTTGTGTGGTAGAGAGAA+AGG | 0.440754 | 7_1:+69442659 | Msa1034040:CDS |
| TGTCATCTAGTTTCTCAACT+TGG | 0.441942 | 7_1:-69433600 | None:intergenic |
| AGACATACACATTTCTAAGA+AGG | 0.449770 | 7_1:+69433717 | Msa1034040:CDS |
| GAGAGAAGGTGGGCTGGTGG+TGG | 0.489904 | 7_1:+69442593 | Msa1034040:CDS |
| TGGGCTGGTGGTGGTTTGTG+TGG | 0.490677 | 7_1:+69442602 | Msa1034040:CDS |
| CTAACGATGATACATTTCAA+TGG | 0.506989 | 7_1:+69433557 | Msa1034040:CDS |
| GAACCTGAGGAGGGAAAGAG+AGG | 0.515560 | 7_1:+69442632 | Msa1034040:CDS |
| TGTTGTGTGGTAGAGAGAAA+GGG | 0.533577 | 7_1:+69442660 | Msa1034040:CDS |
| TCTGTCGGCAACCACCGCGC+TGG | 0.542346 | 7_1:-69442388 | None:intergenic |
| AATGAAGAGAGAAGGTGGGC+TGG | 0.549481 | 7_1:+69442587 | Msa1034040:CDS |
| CATTTCAATGGTTACTCAAG+AGG | 0.561418 | 7_1:+69433569 | Msa1034040:CDS |
| AAGAGAGGGGAGTTGTTGTG+TGG | 0.599803 | 7_1:+69442647 | Msa1034040:CDS |
| CAACGAAGTGGAGGCAACAG+TGG | 0.601753 | 7_1:+69442356 | Msa1034040:CDS |
| AACCTGAGGAGGGAAAGAGA+GGG | 0.608746 | 7_1:+69442633 | Msa1034040:CDS |
| TGGTAGAGAAGAACCTGAGG+AGG | 0.615897 | 7_1:+69442622 | Msa1034040:CDS |
| GAAGAGAGAAGGTGGGCTGG+TGG | 0.620876 | 7_1:+69442590 | Msa1034040:CDS |
| GGCTATCAGAGACACTCTGT+CGG | 0.640008 | 7_1:-69442403 | None:intergenic |
| CGAAGTGGAGGCAACAGTGG+AGG | 0.640895 | 7_1:+69442359 | Msa1034040:CDS |
| ACCTGAGGAGGGAAAGAGAG+GGG | 0.642412 | 7_1:+69442634 | Msa1034040:CDS |
| GTAGATGCATTACAACGAAG+TGG | 0.644234 | 7_1:+69442344 | Msa1034040:CDS |
| AGTTGAGAAACTAGATGACA+AGG | 0.652533 | 7_1:+69433603 | Msa1034040:CDS |
| GGAGGCAAATTCCAGCGCGG+TGG | 0.656736 | 7_1:+69442377 | Msa1034040:CDS |
| GATGCATTACAACGAAGTGG+AGG | 0.668067 | 7_1:+69442347 | Msa1034040:CDS |
| TGTCTCAAGATATAAGAGTG+TGG | 0.668723 | 7_1:+69433524 | Msa1034040:CDS |
| GGTAGAGAAGAACCTGAGGA+GGG | 0.680066 | 7_1:+69442623 | Msa1034040:CDS |
| GTGTGGTAGAGAAGAACCTG+AGG | 0.699744 | 7_1:+69442619 | Msa1034040:CDS |
| TGCTGCAAGTATGACAGTAG+TGG | 0.699875 | 7_1:+69442287 | Msa1034040:intron |
| AGTGGAGGCAAATTCCAGCG+CGG | 0.782186 | 7_1:+69442374 | Msa1034040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATATATATATATTTT+TGG | + | chr7_1:69434006-69434025 | Msa1034040:intron | 0.0% |
| !! | TTAATATATTAATAAAATTT+AGG | - | chr7_1:69440305-69440324 | None:intergenic | 0.0% |
| !!! | AAATGTTATTATTTTTTCAA+TGG | + | chr7_1:69433949-69433968 | Msa1034040:intron | 10.0% |
| !!! | ATCAAAAAAATATTTTAAAG+AGG | - | chr7_1:69434236-69434255 | None:intergenic | 10.0% |
| !!! | ATTTTTTAATGAACAAATAT+AGG | - | chr7_1:69434486-69434505 | None:intergenic | 10.0% |
| !!! | AGCTTTTAAATTTTTTTATT+TGG | + | chr7_1:69434520-69434539 | Msa1034040:intron | 10.0% |
| !! | TAATCTCAAAATAAATTTAT+GGG | + | chr7_1:69438858-69438877 | Msa1034040:intron | 10.0% |
| !! | TATTGATACATTTAAAAAAA+CGG | - | chr7_1:69440127-69440146 | None:intergenic | 10.0% |
| !!! | TTTTATTTACTAATATGTTT+TGG | - | chr7_1:69440621-69440640 | None:intergenic | 10.0% |
| !!! | TTTTATAAAAAAAATACATG+GGG | + | chr7_1:69441823-69441842 | Msa1034040:intron | 10.0% |
| !!! | TTTTATGAAAAAAAATACAT+GGG | + | chr7_1:69441929-69441948 | Msa1034040:intron | 10.0% |
| !! | AATGATCAATAAAATTTCAA+TGG | + | chr7_1:69433879-69433898 | Msa1034040:intron | 15.0% |
| !! | TCAATAAAAATCTTTATTCA+TGG | - | chr7_1:69434614-69434633 | None:intergenic | 15.0% |
| !!! | TTTTAATGTTTACAAAATGA+TGG | + | chr7_1:69435497-69435516 | Msa1034040:intron | 15.0% |
| !! | AAGTTGTAAAGTTAAAAAAA+TGG | - | chr7_1:69436732-69436751 | None:intergenic | 15.0% |
| !!! | TTTTTTAACTTTACAACTTT+TGG | + | chr7_1:69436733-69436752 | Msa1034040:intron | 15.0% |
| !!! | TTTTTAACTTTACAACTTTT+GGG | + | chr7_1:69436734-69436753 | Msa1034040:intron | 15.0% |
| !! | TAGTTAAAAATTTAGAAACA+GGG | - | chr7_1:69437311-69437330 | None:intergenic | 15.0% |
| !!! | TATTTTTCCACTTTATTAAA+GGG | + | chr7_1:69437334-69437353 | Msa1034040:intron | 15.0% |
| !! | TTATAGTTATAATTGAGTTT+AGG | - | chr7_1:69437432-69437451 | None:intergenic | 15.0% |
| !! | AATTATAACTATAACACAAA+GGG | + | chr7_1:69437438-69437457 | Msa1034040:intron | 15.0% |
| !!! | GAATGATATTTTTTTATTTC+TGG | - | chr7_1:69437831-69437850 | None:intergenic | 15.0% |
| !!! | AAATTTTATCTACTTTCTTT+TGG | - | chr7_1:69437960-69437979 | None:intergenic | 15.0% |
| !! | ATAAAAAAAACAATACTATG+TGG | + | chr7_1:69438281-69438300 | Msa1034040:intron | 15.0% |
| !!! | ATTTTTGTTTGTTATTATGT+AGG | + | chr7_1:69438733-69438752 | Msa1034040:intron | 15.0% |
| !!! | ATTAGAGTAGAAAATTTTTT+AGG | - | chr7_1:69438842-69438861 | None:intergenic | 15.0% |
| !! | CTAATCTCAAAATAAATTTA+TGG | + | chr7_1:69438857-69438876 | Msa1034040:intron | 15.0% |
| !! | AAATTATGTTAAACACAAAA+TGG | - | chr7_1:69439128-69439147 | None:intergenic | 15.0% |
| !!! | ACACTTTTTTTTTTTTTTGA+AGG | + | chr7_1:69439634-69439653 | Msa1034040:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGAAGGA+AGG | + | chr7_1:69439638-69439657 | Msa1034040:intron | 15.0% |
| !!! | TTTTTATTGGTAAAAAACAA+TGG | - | chr7_1:69439970-69439989 | None:intergenic | 15.0% |
| !! | AGTTCTTAAAAAAAAAACTT+AGG | - | chr7_1:69440281-69440300 | None:intergenic | 15.0% |
| !! | ATAAAGTTTATGTTAGTATA+TGG | + | chr7_1:69440324-69440343 | Msa1034040:intron | 15.0% |
| !! | ATATTTCATAAATAAGCATA+TGG | - | chr7_1:69440526-69440545 | None:intergenic | 15.0% |
| !! | CATAATAATGTATATATTGA+TGG | - | chr7_1:69440750-69440769 | None:intergenic | 15.0% |
| !!! | TATTTTACATATTTTCACTA+TGG | + | chr7_1:69440777-69440796 | Msa1034040:intron | 15.0% |
| !! | AAGTTGTAAAGTTAAAAAAA+TGG | - | chr7_1:69436732-69436751 | None:intergenic | 15.0% |
| !!! | TTTTTTAACTTTACAACTTT+TGG | + | chr7_1:69436733-69436752 | Msa1034040:intron | 15.0% |
| !!! | TTTTTAACTTTACAACTTTT+GGG | + | chr7_1:69436734-69436753 | Msa1034040:intron | 15.0% |
| !!! | TTTTATGTAATTTATTTTGC+TGG | + | chr7_1:69441877-69441896 | Msa1034040:intron | 15.0% |
| !!! | CTTTTATGAAAAAAAATACA+TGG | + | chr7_1:69441928-69441947 | Msa1034040:intron | 15.0% |
| !! | TTTATGAAAAAAAATACATG+GGG | + | chr7_1:69441930-69441949 | Msa1034040:intron | 15.0% |
| !!! | TTCTTTTGATGAAAATAAAA+AGG | - | chr7_1:69442062-69442081 | None:intergenic | 15.0% |
| !! | ACTTATCACAAATTAAATAA+TGG | + | chr7_1:69442491-69442510 | Msa1034040:intron | 15.0% |
| !! | CTTATCACAAATTAAATAAT+GGG | + | chr7_1:69442492-69442511 | Msa1034040:intron | 15.0% |
| !!! | GAGCTATTATAGATAATTTT+TGG | + | chr7_1:69434028-69434047 | Msa1034040:intron | 20.0% |
| !!! | AATCAAAAACTAAATTTGCT+AGG | + | chr7_1:69434078-69434097 | Msa1034040:intron | 20.0% |
| !! | CAAATGTTAAATTCAAAAGA+AGG | + | chr7_1:69434404-69434423 | Msa1034040:intron | 20.0% |
| !!! | ATCAAAGCTTATTAGTTTTA+GGG | - | chr7_1:69434590-69434609 | None:intergenic | 20.0% |
| !!! | AATCAAAGCTTATTAGTTTT+AGG | - | chr7_1:69434591-69434610 | None:intergenic | 20.0% |
| !! | ATTGAATCATTAGACAAATA+TGG | - | chr7_1:69434725-69434744 | None:intergenic | 20.0% |
| !!! | AGAAAAATAGCTTTATCTTT+TGG | + | chr7_1:69435245-69435264 | Msa1034040:intron | 20.0% |
| !!! | GAAAAATAGCTTTATCTTTT+GGG | + | chr7_1:69435246-69435265 | Msa1034040:intron | 20.0% |
| !!! | AATCTTTTGGCTATTAAAAA+AGG | + | chr7_1:69435314-69435333 | Msa1034040:intron | 20.0% |
| !!! | TCAAAATTTGTTAAGAAGTA+GGG | - | chr7_1:69435457-69435476 | None:intergenic | 20.0% |
| !!! | ATCAAAATTTGTTAAGAAGT+AGG | - | chr7_1:69435458-69435477 | None:intergenic | 20.0% |
| !!! | TTTACAAAATGATGGATATT+GGG | + | chr7_1:69435505-69435524 | Msa1034040:intron | 20.0% |
| !! | TTTATTTCATCAAATAGCAA+AGG | - | chr7_1:69435776-69435795 | None:intergenic | 20.0% |
| !!! | TTTTTAAGACCCTTTTTTTT+AGG | + | chr7_1:69435911-69435930 | Msa1034040:intron | 20.0% |
| !!! | TTTTAAGACCCTTTTTTTTA+GGG | + | chr7_1:69435912-69435931 | Msa1034040:intron | 20.0% |
| !! | AATTTCTTCCCTAAAAAAAA+GGG | - | chr7_1:69435923-69435942 | None:intergenic | 20.0% |
| !! | AAATTTCTTCCCTAAAAAAA+AGG | - | chr7_1:69435924-69435943 | None:intergenic | 20.0% |
| !! | AATTCACAACAAAAAAAACA+TGG | - | chr7_1:69436047-69436066 | None:intergenic | 20.0% |
| !! | TATTATACAAAAATGACTCA+TGG | + | chr7_1:69436091-69436110 | Msa1034040:intron | 20.0% |
| !! | TTACAAAGAAAAAATTAGCT+AGG | - | chr7_1:69436191-69436210 | None:intergenic | 20.0% |
| !! | TAAATACACAACAAAAAACA+TGG | + | chr7_1:69436343-69436362 | Msa1034040:intron | 20.0% |
| !! | ATCTCTTATAAATGACTTAA+AGG | - | chr7_1:69436438-69436457 | None:intergenic | 20.0% |
| !!! | AGTCATTTATAAGAGATTTT+AGG | + | chr7_1:69436441-69436460 | Msa1034040:intron | 20.0% |
| !!! | GTCATTTATAAGAGATTTTA+GGG | + | chr7_1:69436442-69436461 | Msa1034040:intron | 20.0% |
| !!! | ATCAATTTTTTTTGGAAACA+GGG | - | chr7_1:69436546-69436565 | None:intergenic | 20.0% |
| !!! | AAATGGTCATCAATTTTTTT+TGG | - | chr7_1:69436554-69436573 | None:intergenic | 20.0% |
| !!! | AAAATTGATGACCATTTTAA+AGG | + | chr7_1:69436557-69436576 | Msa1034040:intron | 20.0% |
| !!! | AAATTGATGACCATTTTAAA+GGG | + | chr7_1:69436558-69436577 | Msa1034040:intron | 20.0% |
| !! | ATAAAAGTTGGAATAACATT+GGG | - | chr7_1:69436656-69436675 | None:intergenic | 20.0% |
| !! | TATAAAAGTTGGAATAACAT+TGG | - | chr7_1:69436657-69436676 | None:intergenic | 20.0% |
| !!! | TATTCCAACTTTTATATTGA+AGG | + | chr7_1:69436661-69436680 | Msa1034040:intron | 20.0% |
| !!! | ATTCCAACTTTTATATTGAA+GGG | + | chr7_1:69436662-69436681 | Msa1034040:intron | 20.0% |
| !! | CAAAGATCAATAACAAATTA+TGG | + | chr7_1:69437132-69437151 | Msa1034040:intron | 20.0% |
| !! | TTCTATAGGAAAAAAATCAT+TGG | - | chr7_1:69437224-69437243 | None:intergenic | 20.0% |
| !! | GTAGTTAAAAATTTAGAAAC+AGG | - | chr7_1:69437312-69437331 | None:intergenic | 20.0% |
| !!! | CTATTTTTCCACTTTATTAA+AGG | + | chr7_1:69437333-69437352 | Msa1034040:intron | 20.0% |
| !! | ATGGTAACAAAATTTCATAT+GGG | + | chr7_1:69437361-69437380 | Msa1034040:intron | 20.0% |
| !! | TATAATTGAGTTTAGGAAAA+GGG | - | chr7_1:69437425-69437444 | None:intergenic | 20.0% |
| !! | TTATAATTGAGTTTAGGAAA+AGG | - | chr7_1:69437426-69437445 | None:intergenic | 20.0% |
| !! | CAATTATAACTATAACACAA+AGG | + | chr7_1:69437437-69437456 | Msa1034040:intron | 20.0% |
| !! | AGTTTGAATTAGATAAAAGT+GGG | - | chr7_1:69437497-69437516 | None:intergenic | 20.0% |
| !! | AAGTTTGAATTAGATAAAAG+TGG | - | chr7_1:69437498-69437517 | None:intergenic | 20.0% |
| !! | AAAATGGTTAAATGATAAAG+TGG | - | chr7_1:69437621-69437640 | None:intergenic | 20.0% |
| !! | AAAGATGAGAAGTAATAAAA+TGG | - | chr7_1:69437637-69437656 | None:intergenic | 20.0% |
| !!! | TATTTTTTTTACTGCAGAAT+CGG | + | chr7_1:69437792-69437811 | Msa1034040:intron | 20.0% |
| !! | TTATTATGTAGGATGTTAAA+AGG | + | chr7_1:69438744-69438763 | Msa1034040:intron | 20.0% |
| !! | ACATACATCATTAATTAAAC+TGG | - | chr7_1:69439267-69439286 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATATTAGTGAT+CGG | + | chr7_1:69439340-69439359 | Msa1034040:intron | 20.0% |
| !!! | TTTTTGCTTATATTAATGAC+CGG | - | chr7_1:69439429-69439448 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAATCAACTTTTT+AGG | - | chr7_1:69439528-69439547 | None:intergenic | 20.0% |
| !!! | ACATTTTAAATGTATGTATG+TGG | + | chr7_1:69439846-69439865 | Msa1034040:intron | 20.0% |
| !!! | TTGTTTTTCTCACTTTTTAT+TGG | - | chr7_1:69439983-69440002 | None:intergenic | 20.0% |
| !! | TGTATCAATAAAAAATCCTT+TGG | + | chr7_1:69440137-69440156 | Msa1034040:intron | 20.0% |
| !! | CTCATTATAGTTACTAAAAT+GGG | - | chr7_1:69440185-69440204 | None:intergenic | 20.0% |
| !! | ACTCATTATAGTTACTAAAA+TGG | - | chr7_1:69440186-69440205 | None:intergenic | 20.0% |
| !!! | ATCTCACTGTATTTTTTTTA+CGG | + | chr7_1:69440490-69440509 | Msa1034040:intron | 20.0% |
| !!! | ATCAATTTTTTTTGGAAACA+GGG | - | chr7_1:69436546-69436565 | None:intergenic | 20.0% |
| !!! | AAATGGTCATCAATTTTTTT+TGG | - | chr7_1:69436554-69436573 | None:intergenic | 20.0% |
| !!! | AAAATTGATGACCATTTTAA+AGG | + | chr7_1:69436557-69436576 | Msa1034040:intron | 20.0% |
| !!! | AAATTGATGACCATTTTAAA+GGG | + | chr7_1:69436558-69436577 | Msa1034040:intron | 20.0% |
| !! | ATAAAAGTTGGAATAACATT+GGG | - | chr7_1:69436656-69436675 | None:intergenic | 20.0% |
| !! | TATAAAAGTTGGAATAACAT+TGG | - | chr7_1:69436657-69436676 | None:intergenic | 20.0% |
| !!! | TATTCCAACTTTTATATTGA+AGG | + | chr7_1:69436661-69436680 | Msa1034040:intron | 20.0% |
| !!! | ATTCCAACTTTTATATTGAA+GGG | + | chr7_1:69436662-69436681 | Msa1034040:intron | 20.0% |
| !! | CAAAGATCAATAACAAATTA+TGG | + | chr7_1:69437132-69437151 | Msa1034040:intron | 20.0% |
| !! | TTCTATAGGAAAAAAATCAT+TGG | - | chr7_1:69437224-69437243 | None:intergenic | 20.0% |
| !! | ATGGTGATTAATAATTAAAC+AGG | + | chr7_1:69441587-69441606 | Msa1034040:intron | 20.0% |
| !!! | TATGTTTTTCCTTTCAAAAA+AGG | + | chr7_1:69441774-69441793 | Msa1034040:intron | 20.0% |
| !!! | AATAAAAAGGACTTTTTTGT+TGG | - | chr7_1:69442049-69442068 | None:intergenic | 20.0% |
| !!! | GTAAATATTAGATCTGATTT+TGG | - | chr7_1:69442223-69442242 | None:intergenic | 20.0% |
| !! | TTTCTGATGTAATATTTAAC+AGG | + | chr7_1:69442440-69442459 | Msa1034040:intron | 20.0% |
| ! | CCATAACAGATTTATGTATT+GGG | - | chr7_1:69434807-69434826 | None:intergenic | 25.0% |
| ! | TCCATAACAGATTTATGTAT+TGG | - | chr7_1:69434808-69434827 | None:intergenic | 25.0% |
| ! | AAAACAAATCAAAGACAACA+AGG | + | chr7_1:69434836-69434855 | Msa1034040:intron | 25.0% |
| !! | AAAACGTGTTAAGAATCTTT+TGG | + | chr7_1:69435301-69435320 | Msa1034040:intron | 25.0% |
| !!! | GTTTACAAAATGATGGATAT+TGG | + | chr7_1:69435504-69435523 | Msa1034040:intron | 25.0% |
| ! | AAAATGAAGAAATGAAGATG+AGG | + | chr7_1:69435625-69435644 | Msa1034040:intron | 25.0% |
| !!! | CATTTTCTTCTATTAGCTTT+AGG | + | chr7_1:69435738-69435757 | Msa1034040:intron | 25.0% |
| ! | TGTTATACAAAAATGACTCA+TGG | - | chr7_1:69436301-69436320 | None:intergenic | 25.0% |
| ! | TTTCATGTGCTTAAAAATGT+TGG | + | chr7_1:69436377-69436396 | Msa1034040:intron | 25.0% |
| ! | TTCATGTGCTTAAAAATGTT+GGG | + | chr7_1:69436378-69436397 | Msa1034040:intron | 25.0% |
| !!! | AGGGTCTTAAATTTTTTGAA+AGG | + | chr7_1:69436461-69436480 | Msa1034040:intron | 25.0% |
| !!! | GACAGTTATATAATTTTGGT+AGG | - | chr7_1:69436524-69436543 | None:intergenic | 25.0% |
| !!! | CATCAATTTTTTTTGGAAAC+AGG | - | chr7_1:69436547-69436566 | None:intergenic | 25.0% |
| !!! | ACCATTTTAAAGGGTAATAT+TGG | + | chr7_1:69436567-69436586 | Msa1034040:intron | 25.0% |
| !! | TCCAATATTACCCTTTAAAA+TGG | - | chr7_1:69436571-69436590 | None:intergenic | 25.0% |
| ! | ATAGAAAGAGAAGTAAAAGA+GGG | - | chr7_1:69436842-69436861 | None:intergenic | 25.0% |
| ! | AATAGAAAGAGAAGTAAAAG+AGG | - | chr7_1:69436843-69436862 | None:intergenic | 25.0% |
| ! | AATAACAAATTATGGCATCA+AGG | + | chr7_1:69437140-69437159 | Msa1034040:intron | 25.0% |
| ! | GGACAGAAATGAAAAAAAAA+GGG | - | chr7_1:69437182-69437201 | None:intergenic | 25.0% |
| ! | AGGACAGAAATGAAAAAAAA+AGG | - | chr7_1:69437183-69437202 | None:intergenic | 25.0% |
| ! | TCAATTTCTACTCTTTCTAT+AGG | - | chr7_1:69437238-69437257 | None:intergenic | 25.0% |
| ! | GATGGTAACAAAATTTCATA+TGG | + | chr7_1:69437360-69437379 | Msa1034040:intron | 25.0% |
| !! | TAAACTTTTGTAGAAAGAGA+AGG | - | chr7_1:69437578-69437597 | None:intergenic | 25.0% |
| ! | TTCTGCAGTAAAAAAAATAG+TGG | - | chr7_1:69437791-69437810 | None:intergenic | 25.0% |
| ! | AACTATAATCAGAACAACTT+TGG | - | chr7_1:69438713-69438732 | None:intergenic | 25.0% |
| ! | GTTAAAAGGAAGAAGATTAT+CGG | + | chr7_1:69438758-69438777 | Msa1034040:intron | 25.0% |
| ! | ATATGGATGAGAAAAGAAAA+GGG | + | chr7_1:69438804-69438823 | Msa1034040:intron | 25.0% |
| ! | TGAAAATGAGAGAAAATCAA+TGG | + | chr7_1:69438890-69438909 | Msa1034040:intron | 25.0% |
| !! | ATCAATGGTAATTTCGTTTT+TGG | + | chr7_1:69438905-69438924 | Msa1034040:intron | 25.0% |
| ! | TATAAATATAAATGCCACAC+AGG | - | chr7_1:69439195-69439214 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+AGG | + | chr7_1:69439538-69439557 | Msa1034040:intron | 25.0% |
| !! | GACATTGTAAAAGTTACTTT+AGG | - | chr7_1:69439585-69439604 | None:intergenic | 25.0% |
| !!! | CAATCATTTTTGACAACTTT+TGG | + | chr7_1:69439895-69439914 | Msa1034040:intron | 25.0% |
| ! | TAGTAACTATAATGAGTGAT+AGG | + | chr7_1:69440189-69440208 | Msa1034040:intron | 25.0% |
| ! | AAAAAAAACTTAGGCAATTG+TGG | - | chr7_1:69440272-69440291 | None:intergenic | 25.0% |
| !!! | TCTCACTGTATTTTTTTTAC+GGG | + | chr7_1:69440491-69440510 | Msa1034040:intron | 25.0% |
| !! | CATTAGTTATGATTTTTCAC+AGG | + | chr7_1:69440573-69440592 | Msa1034040:intron | 25.0% |
| !!! | GACAGTTATATAATTTTGGT+AGG | - | chr7_1:69436524-69436543 | None:intergenic | 25.0% |
| !!! | CATCAATTTTTTTTGGAAAC+AGG | - | chr7_1:69436547-69436566 | None:intergenic | 25.0% |
| !!! | ACCATTTTAAAGGGTAATAT+TGG | + | chr7_1:69436567-69436586 | Msa1034040:intron | 25.0% |
| !! | TCCAATATTACCCTTTAAAA+TGG | - | chr7_1:69436571-69436590 | None:intergenic | 25.0% |
| ! | ATAGAAAGAGAAGTAAAAGA+GGG | - | chr7_1:69436842-69436861 | None:intergenic | 25.0% |
| ! | AATAGAAAGAGAAGTAAAAG+AGG | - | chr7_1:69436843-69436862 | None:intergenic | 25.0% |
| ! | AATAACAAATTATGGCATCA+AGG | + | chr7_1:69437140-69437159 | Msa1034040:intron | 25.0% |
| ! | GGACAGAAATGAAAAAAAAA+GGG | - | chr7_1:69437182-69437201 | None:intergenic | 25.0% |
| ! | AGGACAGAAATGAAAAAAAA+AGG | - | chr7_1:69437183-69437202 | None:intergenic | 25.0% |
| ! | TCAATTTCTACTCTTTCTAT+AGG | - | chr7_1:69437238-69437257 | None:intergenic | 25.0% |
| ! | CTTCATCAAACAAACAAATA+TGG | + | chr7_1:69441673-69441692 | Msa1034040:intron | 25.0% |
| !!! | CATGATTATCCTTTTTTGAA+AGG | - | chr7_1:69441786-69441805 | None:intergenic | 25.0% |
| !!! | TTAAATAATGGGTTTTGTAG+AGG | + | chr7_1:69442503-69442522 | Msa1034040:intron | 25.0% |
| CTAACGATGATACATTTCAA+TGG | + | chr7_1:69433557-69433576 | Msa1034040:CDS | 30.0% | |
| TTATAACGCTTTCTCTTGTT+TGG | - | chr7_1:69433636-69433655 | None:intergenic | 30.0% | |
| ! | AGACATACACATTTCTAAGA+AGG | + | chr7_1:69433717-69433736 | Msa1034040:CDS | 30.0% |
| !! | CAAAAACTAAATTTGCTAGG+TGG | + | chr7_1:69434081-69434100 | Msa1034040:intron | 30.0% |
| AAATTCAAAAGAAGGTCTCT+AGG | + | chr7_1:69434412-69434431 | Msa1034040:intron | 30.0% | |
| AGAGAAGTTTCAATTAAGGA+GGG | + | chr7_1:69434555-69434574 | Msa1034040:intron | 30.0% | |
| CCCAATACATAAATCTGTTA+TGG | + | chr7_1:69434804-69434823 | Msa1034040:intron | 30.0% | |
| GATCAATACATTCTCAATGA+AGG | + | chr7_1:69434882-69434901 | Msa1034040:intron | 30.0% | |
| TTATGTCATTGAAGTGAAGT+TGG | - | chr7_1:69435575-69435594 | None:intergenic | 30.0% | |
| !! | GAAGAAAATGTTGATAGCAT+TGG | - | chr7_1:69435728-69435747 | None:intergenic | 30.0% |
| GGGTCTTAAAAATTTCTGTA+AGG | - | chr7_1:69435903-69435922 | None:intergenic | 30.0% | |
| ! | GTCATTTACGAGAGATTTTA+GGG | - | chr7_1:69435952-69435971 | None:intergenic | 30.0% |
| ! | AGTCATTTACGAGAGATTTT+AGG | - | chr7_1:69435953-69435972 | None:intergenic | 30.0% |
| ATCTCTCGTAAATGACTTTA+AGG | + | chr7_1:69435956-69435975 | Msa1034040:intron | 30.0% | |
| CACAACAAAAAAAACATGGT+TGG | - | chr7_1:69436043-69436062 | None:intergenic | 30.0% | |
| ATGCGCTAATTCAAAACAAA+AGG | - | chr7_1:69436137-69436156 | None:intergenic | 30.0% | |
| AAAAAATTAGCTAGGAGACA+TGG | - | chr7_1:69436183-69436202 | None:intergenic | 30.0% | |
| ! | CAGGGACAGTTATATAATTT+TGG | - | chr7_1:69436528-69436547 | None:intergenic | 30.0% |
| ATGCCCTTCAATATAAAAGT+TGG | - | chr7_1:69436668-69436687 | None:intergenic | 30.0% | |
| TGAGTGAATCAATTAAGAGA+GGG | - | chr7_1:69436795-69436814 | None:intergenic | 30.0% | |
| TTGAGTGAATCAATTAAGAG+AGG | - | chr7_1:69436796-69436815 | None:intergenic | 30.0% | |
| TATTGATCTTTGTTGATCAC+TGG | - | chr7_1:69437124-69437143 | None:intergenic | 30.0% | |
| GGTAGAAAATGAAAAAAGAG+AGG | - | chr7_1:69437203-69437222 | None:intergenic | 30.0% | |
| ! | CAGGGACAGTTATATAATTT+TGG | - | chr7_1:69436528-69436547 | None:intergenic | 30.0% |
| CATCTTACCCTTTAATAAAG+TGG | - | chr7_1:69437344-69437363 | None:intergenic | 30.0% | |
| CACTTTATTAAAGGGTAAGA+TGG | + | chr7_1:69437342-69437361 | Msa1034040:intron | 30.0% | |
| ! | CCTAAGCTTTTTACCAATAT+CGG | + | chr7_1:69437389-69437408 | Msa1034040:intron | 30.0% |
| TTTGTAGAAAGAGAAGGTAA+AGG | - | chr7_1:69437572-69437591 | None:intergenic | 30.0% | |
| AAACAACAACAAAGATATGC+AGG | - | chr7_1:69437718-69437737 | None:intergenic | 30.0% | |
| !! | TGCATATCTTTGTTGTTGTT+TGG | + | chr7_1:69437717-69437736 | Msa1034040:intron | 30.0% |
| CAACATAAACCTCTCAATAA+AGG | - | chr7_1:69438049-69438068 | None:intergenic | 30.0% | |
| CTTTATTGAGAGGTTTATGT+TGG | + | chr7_1:69438047-69438066 | Msa1034040:intron | 30.0% | |
| TTTCTTACTTGACAAATGCA+AGG | - | chr7_1:69438251-69438270 | None:intergenic | 30.0% | |
| ATACATGCAACAACAACAAA+GGG | - | chr7_1:69438474-69438493 | None:intergenic | 30.0% | |
| TATACATGCAACAACAACAA+AGG | - | chr7_1:69438475-69438494 | None:intergenic | 30.0% | |
| ATAATCAGAACAACTTTGGT+GGG | - | chr7_1:69438709-69438728 | None:intergenic | 30.0% | |
| TATAATCAGAACAACTTTGG+TGG | - | chr7_1:69438710-69438729 | None:intergenic | 30.0% | |
| CGGTATATTAAGTCAAAATG+AGG | + | chr7_1:69438778-69438797 | Msa1034040:intron | 30.0% | |
| ! | CTTTTCTTTTCTCATCCATA+TGG | - | chr7_1:69438805-69438824 | None:intergenic | 30.0% |
| CATATGGATGAGAAAAGAAA+AGG | + | chr7_1:69438803-69438822 | Msa1034040:intron | 30.0% | |
| AGGAAAGAGGGAAAAAAATA+TGG | + | chr7_1:69439066-69439085 | Msa1034040:intron | 30.0% | |
| ! | GATAGATGATAATGAACTTG+TGG | + | chr7_1:69439088-69439107 | Msa1034040:intron | 30.0% |
| TTCCTATATTTGTGATCAGA+TGG | - | chr7_1:69439227-69439246 | None:intergenic | 30.0% | |
| GTGTATAAAAAATGACTGTG+CGG | + | chr7_1:69439366-69439385 | Msa1034040:intron | 30.0% | |
| TAAGCAAAAATCCACTTTCT+AGG | + | chr7_1:69439439-69439458 | Msa1034040:intron | 30.0% | |
| AATTGAATGAACCTAGAAAG+TGG | - | chr7_1:69439453-69439472 | None:intergenic | 30.0% | |
| ! | GATAAAGTGAATCTTTTGCT+TGG | + | chr7_1:69439742-69439761 | Msa1034040:intron | 30.0% |
| !!! | AGATTTTAGTTTCCCACTAA+AGG | - | chr7_1:69439825-69439844 | None:intergenic | 30.0% |
| ! | CAGGGACAGTTATATAATTT+TGG | - | chr7_1:69436528-69436547 | None:intergenic | 30.0% |
| ATGCCCTTCAATATAAAAGT+TGG | - | chr7_1:69436668-69436687 | None:intergenic | 30.0% | |
| TGAGTGAATCAATTAAGAGA+GGG | - | chr7_1:69436795-69436814 | None:intergenic | 30.0% | |
| TTGAGTGAATCAATTAAGAG+AGG | - | chr7_1:69436796-69436815 | None:intergenic | 30.0% | |
| TATTGATCTTTGTTGATCAC+TGG | - | chr7_1:69437124-69437143 | None:intergenic | 30.0% | |
| GGTAGAAAATGAAAAAAGAG+AGG | - | chr7_1:69437203-69437222 | None:intergenic | 30.0% | |
| AGTAGAAATTGAAAAGACAC+AGG | + | chr7_1:69441558-69441577 | Msa1034040:intron | 30.0% | |
| AATACAATGTCTTCTCTCTT+TGG | - | chr7_1:69442174-69442193 | None:intergenic | 30.0% | |
| !!! | CTTCATCTCTTCCTTTTTTT+CGG | - | chr7_1:69442325-69442344 | None:intergenic | 30.0% |
| TCAGAAATCACGTAAAAGAA+TGG | - | chr7_1:69442427-69442446 | None:intergenic | 30.0% | |
| AACAAGATGATTGAATACTG+AGG | + | chr7_1:69442463-69442482 | Msa1034040:intron | 30.0% | |
| !!! | TCTTCATTTTTTGCAAACTC+AGG | - | chr7_1:69442575-69442594 | None:intergenic | 30.0% |
| TTGCAAAAAATGAAGAGAGA+AGG | + | chr7_1:69442579-69442598 | Msa1034040:CDS | 30.0% | |
| AAAAAATGAAGAGAGAAGGT+GGG | + | chr7_1:69442583-69442602 | Msa1034040:CDS | 30.0% | |
| TGTCTCAAGATATAAGAGTG+TGG | + | chr7_1:69433524-69433543 | Msa1034040:CDS | 35.0% | |
| CATTTCAATGGTTACTCAAG+AGG | + | chr7_1:69433569-69433588 | Msa1034040:CDS | 35.0% | |
| ! | TGTCATCTAGTTTCTCAACT+TGG | - | chr7_1:69433603-69433622 | None:intergenic | 35.0% |
| AGTTGAGAAACTAGATGACA+AGG | + | chr7_1:69433603-69433622 | Msa1034040:CDS | 35.0% | |
| AAACAGTGAAATAGTGCTCT+TGG | + | chr7_1:69433775-69433794 | Msa1034040:intron | 35.0% | |
| !!! | TGTCCACACAACTCTTTTTT+TGG | + | chr7_1:69434153-69434172 | Msa1034040:intron | 35.0% |
| !!! | GTCCACACAACTCTTTTTTT+GGG | + | chr7_1:69434154-69434173 | Msa1034040:intron | 35.0% |
| TACCCAAAAAAAGAGTTGTG+TGG | - | chr7_1:69434159-69434178 | None:intergenic | 35.0% | |
| ACTACAAGACAAACGAAAAC+AGG | + | chr7_1:69434324-69434343 | Msa1034040:intron | 35.0% | |
| AATTGAAACTTCTCTGCAGA+AGG | - | chr7_1:69434550-69434569 | None:intergenic | 35.0% | |
| CTGCAGAGAAGTTTCAATTA+AGG | + | chr7_1:69434551-69434570 | Msa1034040:intron | 35.0% | |
| CAGAGAAGTTTCAATTAAGG+AGG | + | chr7_1:69434554-69434573 | Msa1034040:intron | 35.0% | |
| TGATAAACTTACTGCTCAGT+TGG | + | chr7_1:69434769-69434788 | Msa1034040:intron | 35.0% | |
| GATAAACTTACTGCTCAGTT+GGG | + | chr7_1:69434770-69434789 | Msa1034040:intron | 35.0% | |
| AAAGACAACAAGGAGAATTG+TGG | + | chr7_1:69434846-69434865 | Msa1034040:intron | 35.0% | |
| AGAACGAAGACCAACTTTAA+AGG | + | chr7_1:69434991-69435010 | Msa1034040:intron | 35.0% | |
| GACCAAGTAAATCGTTTGAA+GGG | + | chr7_1:69435403-69435422 | Msa1034040:intron | 35.0% | |
| ! | TTGGGTTGTTTGAGTTTGAT+TGG | + | chr7_1:69435523-69435542 | Msa1034040:intron | 35.0% |
| ! | TGGGTTGTTTGAGTTTGATT+GGG | + | chr7_1:69435524-69435543 | Msa1034040:intron | 35.0% |
| CTATCTTCATGATTTCAGCA+TGG | - | chr7_1:69435605-69435624 | None:intergenic | 35.0% | |
| GTCTACTAGTAAGAAGTAAG+AGG | + | chr7_1:69435682-69435701 | Msa1034040:intron | 35.0% | |
| !! | CTATTAGCTTTAGGATGAAG+AGG | + | chr7_1:69435747-69435766 | Msa1034040:intron | 35.0% |
| AAGAGCTCAAGATAACAAAG+TGG | + | chr7_1:69435877-69435896 | Msa1034040:intron | 35.0% | |
| ! | GTCAAGCTTTTTACCAACTT+CGG | + | chr7_1:69436613-69436632 | Msa1034040:intron | 35.0% |
| CCGATATTGGTAAAAAGCTT+AGG | - | chr7_1:69437392-69437411 | None:intergenic | 35.0% | |
| GCAGGAAAAGAAAAGTTGTT+AGG | - | chr7_1:69437700-69437719 | None:intergenic | 35.0% | |
| !!! | TTTTTTTACTGCAGAATCGG+TGG | + | chr7_1:69437795-69437814 | Msa1034040:intron | 35.0% |
| TCACTGAATATGCATCATCA+AGG | + | chr7_1:69437849-69437868 | Msa1034040:intron | 35.0% | |
| AATAACACAGTTCTCATGTG+AGG | + | chr7_1:69437917-69437936 | Msa1034040:intron | 35.0% | |
| CTGCATCTATTACATCAATG+TGG | - | chr7_1:69438597-69438616 | None:intergenic | 35.0% | |
| TCATGCTGGAAAATCATATG+TGG | - | chr7_1:69438681-69438700 | None:intergenic | 35.0% | |
| ! | CATATGATTTTCCAGCATGA+TGG | + | chr7_1:69438681-69438700 | Msa1034040:intron | 35.0% |
| AAGTCAAAATGAGGTCCATA+TGG | + | chr7_1:69438787-69438806 | Msa1034040:intron | 35.0% | |
| !!! | ATTTCGTTTTTGGTGTCTCA+TGG | + | chr7_1:69438915-69438934 | Msa1034040:intron | 35.0% |
| ! | ATGATAATGAACTTGTGGCT+TGG | + | chr7_1:69439093-69439112 | Msa1034040:intron | 35.0% |
| CACCATCTGATCACAAATAT+AGG | + | chr7_1:69439222-69439241 | Msa1034040:intron | 35.0% | |
| TTGCTTATATTAGTGATCGG+AGG | + | chr7_1:69439343-69439362 | Msa1034040:intron | 35.0% | |
| TGCTTATATTAGTGATCGGA+GGG | + | chr7_1:69439344-69439363 | Msa1034040:intron | 35.0% | |
| TGCTTATATTAATGACCGGA+GGG | - | chr7_1:69439425-69439444 | None:intergenic | 35.0% | |
| TTGCTTATATTAATGACCGG+AGG | - | chr7_1:69439426-69439445 | None:intergenic | 35.0% | |
| TTGCTTATATTAGTGACAGG+AGG | + | chr7_1:69439541-69439560 | Msa1034040:intron | 35.0% | |
| TGCTTATATTAGTGACAGGA+GGG | + | chr7_1:69439542-69439561 | Msa1034040:intron | 35.0% | |
| AGGAGTAGTGTTATGTATGT+TGG | + | chr7_1:69439658-69439677 | Msa1034040:intron | 35.0% | |
| GTAGTGTTATGTATGTTGGT+AGG | + | chr7_1:69439662-69439681 | Msa1034040:intron | 35.0% | |
| ! | TTATGTATGTTGGTAGGTGA+GGG | + | chr7_1:69439668-69439687 | Msa1034040:intron | 35.0% |
| ACGATAACAAATTAACTGCG+TGG | + | chr7_1:69439768-69439787 | Msa1034040:intron | 35.0% | |
| ! | TTTAGTTTCCCACTAAAGGA+AGG | - | chr7_1:69439821-69439840 | None:intergenic | 35.0% |
| GTTACAATTGTACACTCCAA+AGG | - | chr7_1:69440156-69440175 | None:intergenic | 35.0% | |
| ! | GTCAAGCTTTTTACCAACTT+CGG | + | chr7_1:69436613-69436632 | Msa1034040:intron | 35.0% |
| GAAAAGAACCACCGAAAAAA+AGG | + | chr7_1:69442311-69442330 | Msa1034040:CDS | 35.0% | |
| GAGTAAGATGAATAGAACTG+TGG | + | chr7_1:69442527-69442546 | Msa1034040:intron | 35.0% | |
| CAAAAAATGAAGAGAGAAGG+TGG | + | chr7_1:69442582-69442601 | Msa1034040:CDS | 35.0% | |
| TTGCTTGACATCAGTGTTCT+CGG | - | chr7_1:69434297-69434316 | None:intergenic | 40.0% | |
| TAGGCAAAAAGTTGCTTCTG+AGG | - | chr7_1:69434467-69434486 | None:intergenic | 40.0% | |
| ATGGTTCACTACTTCGACAA+TGG | - | chr7_1:69434706-69434725 | None:intergenic | 40.0% | |
| ! | GGATTTCTGAAGAGTTGTGA+TGG | - | chr7_1:69434943-69434962 | None:intergenic | 40.0% |
| TAGACGCAGCTATGTTGTTA+AGG | - | chr7_1:69434964-69434983 | None:intergenic | 40.0% | |
| CTTGCAAATTCCACATCGTA+GGG | - | chr7_1:69435020-69435039 | None:intergenic | 40.0% | |
| ACTTGCAAATTCCACATCGT+AGG | - | chr7_1:69435021-69435040 | None:intergenic | 40.0% | |
| GCACTGTCTTAAGTCGATTA+AGG | + | chr7_1:69435100-69435119 | Msa1034040:intron | 40.0% | |
| AACGATTTACTTGGTCCAGA+CGG | - | chr7_1:69435399-69435418 | None:intergenic | 40.0% | |
| GGACCAAGTAAATCGTTTGA+AGG | + | chr7_1:69435402-69435421 | Msa1034040:intron | 40.0% | |
| CTCCCTTCAAACGATTTACT+TGG | - | chr7_1:69435408-69435427 | None:intergenic | 40.0% | |
| TCATGATTTCAGCATGGTCT+GGG | - | chr7_1:69435599-69435618 | None:intergenic | 40.0% | |
| TTCATGATTTCAGCATGGTC+TGG | - | chr7_1:69435600-69435619 | None:intergenic | 40.0% | |
| TTACTAGTAGACAACGCTGA+TGG | - | chr7_1:69435674-69435693 | None:intergenic | 40.0% | |
| ACTGCCAAGAATATGAACGT+TGG | + | chr7_1:69435824-69435843 | Msa1034040:intron | 40.0% | |
| CTGCCAAGAATATGAACGTT+GGG | + | chr7_1:69435825-69435844 | Msa1034040:intron | 40.0% | |
| AGCGCATTCCATAACTCAAA+AGG | - | chr7_1:69436240-69436259 | None:intergenic | 40.0% | |
| TTGGAATAACATTGGGTCAG+GGG | - | chr7_1:69436649-69436668 | None:intergenic | 40.0% | |
| GTTGGAATAACATTGGGTCA+GGG | - | chr7_1:69436650-69436669 | None:intergenic | 40.0% | |
| AGTTGGAATAACATTGGGTC+AGG | - | chr7_1:69436651-69436670 | None:intergenic | 40.0% | |
| GGGTATTAGAAGTCCGATAT+TGG | - | chr7_1:69437405-69437424 | None:intergenic | 40.0% | |
| GCTCATTGTCCTTTATTGAG+AGG | + | chr7_1:69438037-69438056 | Msa1034040:intron | 40.0% | |
| CTTACTTGACAAATGCAAGG+AGG | - | chr7_1:69438248-69438267 | None:intergenic | 40.0% | |
| CAATGCAAGCATTTCAGATC+TGG | - | chr7_1:69438447-69438466 | None:intergenic | 40.0% | |
| ! | AGGGGTACAAACAATTGTGA+CGG | + | chr7_1:69439005-69439024 | Msa1034040:intron | 40.0% |
| GTACAAACAATTGTGACGGT+GGG | + | chr7_1:69439009-69439028 | Msa1034040:intron | 40.0% | |
| AGAAGATAGCTTCTCTGCTT+TGG | + | chr7_1:69439032-69439051 | Msa1034040:intron | 40.0% | |
| TCTCTGCTTTGGTCTGTTAA+AGG | + | chr7_1:69439043-69439062 | Msa1034040:intron | 40.0% | |
| GTCTGTTAAAGGAGGAAAGA+GGG | + | chr7_1:69439054-69439073 | Msa1034040:intron | 40.0% | |
| ! | GTTATGTATGTTGGTAGGTG+AGG | + | chr7_1:69439667-69439686 | Msa1034040:intron | 40.0% |
| TTGGAATAACATTGGGTCAG+GGG | - | chr7_1:69436649-69436668 | None:intergenic | 40.0% | |
| GTTGGAATAACATTGGGTCA+GGG | - | chr7_1:69436650-69436669 | None:intergenic | 40.0% | |
| AGTTGGAATAACATTGGGTC+AGG | - | chr7_1:69436651-69436670 | None:intergenic | 40.0% | |
| !!! | CATCTCTTCCTTTTTTTCGG+TGG | - | chr7_1:69442322-69442341 | None:intergenic | 40.0% |
| GTAGATGCATTACAACGAAG+TGG | + | chr7_1:69442344-69442363 | Msa1034040:CDS | 40.0% | |
| GATGATTGAATACTGAGGAC+TGG | + | chr7_1:69442468-69442487 | Msa1034040:intron | 40.0% | |
| TTGTTGTGTGGTAGAGAGAA+AGG | + | chr7_1:69442659-69442678 | Msa1034040:CDS | 40.0% | |
| TGTTGTGTGGTAGAGAGAAA+GGG | + | chr7_1:69442660-69442679 | Msa1034040:CDS | 40.0% | |
| ! | TCGGGTGATTGCATGACTTT+TGG | - | chr7_1:69434278-69434297 | None:intergenic | 45.0% |
| TGCTTGACATCAGTGTTCTC+GGG | - | chr7_1:69434296-69434315 | None:intergenic | 45.0% | |
| !! | CGTAGGGACTCCTTTAAAGT+TGG | - | chr7_1:69435004-69435023 | None:intergenic | 45.0% |
| TTAAAGGAGTCCCTACGATG+TGG | + | chr7_1:69435007-69435026 | Msa1034040:intron | 45.0% | |
| TGCATTCTAACTCCTGCGAA+TGG | + | chr7_1:69435133-69435152 | Msa1034040:intron | 45.0% | |
| CAGCCCAACGTTCATATTCT+TGG | - | chr7_1:69435831-69435850 | None:intergenic | 45.0% | |
| AATTAGCTAGGAGACATGGC+CGG | - | chr7_1:69436179-69436198 | None:intergenic | 45.0% | |
| !!! | GTGCGTAGCCTTTTGAGTTA+TGG | + | chr7_1:69436229-69436248 | Msa1034040:intron | 45.0% |
| TGGTGTCTCATGGTCAGAAA+TGG | + | chr7_1:69438925-69438944 | Msa1034040:intron | 45.0% | |
| TGCTAGAGATAAGCTGTAGC+AGG | + | chr7_1:69438953-69438972 | Msa1034040:intron | 45.0% | |
| GCTAGAGATAAGCTGTAGCA+GGG | + | chr7_1:69438954-69438973 | Msa1034040:intron | 45.0% | |
| AGCTGTAGCAGGGAGTTTAT+TGG | + | chr7_1:69438964-69438983 | Msa1034040:intron | 45.0% | |
| ! | CAGGGAGTTTATTGGCTGAT+AGG | + | chr7_1:69438972-69438991 | Msa1034040:intron | 45.0% |
| !! | GCTGATAGGTTTGTTGTGCA+GGG | + | chr7_1:69438986-69439005 | Msa1034040:intron | 45.0% |
| !! | CTGATAGGTTTGTTGTGCAG+GGG | + | chr7_1:69438987-69439006 | Msa1034040:intron | 45.0% |
| GGTACAAACAATTGTGACGG+TGG | + | chr7_1:69439008-69439027 | Msa1034040:intron | 45.0% | |
| CTGCTTTGGTCTGTTAAAGG+AGG | + | chr7_1:69439046-69439065 | Msa1034040:intron | 45.0% | |
| GGTCTGTTAAAGGAGGAAAG+AGG | + | chr7_1:69439053-69439072 | Msa1034040:intron | 45.0% | |
| CACACAGGTAAACACAACAC+AGG | - | chr7_1:69439180-69439199 | None:intergenic | 45.0% | |
| CTGTGTTGTGTTTACCTGTG+TGG | + | chr7_1:69439178-69439197 | Msa1034040:intron | 45.0% | |
| TTGCACACAAATACACCCTC+CGG | + | chr7_1:69439407-69439426 | Msa1034040:intron | 45.0% | |
| AGTCATGCACCTTCCTTTAG+TGG | + | chr7_1:69439809-69439828 | Msa1034040:intron | 45.0% | |
| GTCATGCACCTTCCTTTAGT+GGG | + | chr7_1:69439810-69439829 | Msa1034040:intron | 45.0% | |
| GAAAAGACACAGGATGCAGA+TGG | + | chr7_1:69441568-69441587 | Msa1034040:intron | 45.0% | |
| TGCTGCAAGTATGACAGTAG+TGG | + | chr7_1:69442287-69442306 | Msa1034040:intron | 45.0% | |
| GATGCATTACAACGAAGTGG+AGG | + | chr7_1:69442347-69442366 | Msa1034040:CDS | 45.0% | |
| !! | TAAATAAAAAATAAATAAAG+AGG | - | chr7_1:69434207-69434226 | None:intergenic | 5.0% |
| !!! | AAAATAATTTATTTAAAATC+AGG | - | chr7_1:69434637-69434656 | None:intergenic | 5.0% |
| !!! | TTCTTTTTTTTTTTTTTAAA+TGG | - | chr7_1:69435855-69435874 | None:intergenic | 5.0% |
| !!! | ATTTTTATAAAAAAAATACA+TGG | + | chr7_1:69441821-69441840 | Msa1034040:intron | 5.0% |
| !!! | TTTTTATAAAAAAAATACAT+GGG | + | chr7_1:69441822-69441841 | Msa1034040:intron | 5.0% |
| AAGCTGCCAAAACCACTCAG+TGG | + | chr7_1:69434438-69434457 | Msa1034040:intron | 50.0% | |
| ! | AGGAAGCCACTGAGTGGTTT+TGG | - | chr7_1:69434447-69434466 | None:intergenic | 50.0% |
| GAAACTTCTCTGCAGAAGGC+TGG | - | chr7_1:69434546-69434565 | None:intergenic | 50.0% | |
| TTCTTGGCAGTCGTTGTCTG+AGG | - | chr7_1:69435815-69435834 | None:intergenic | 50.0% | |
| GGGTAGTGTAAGTCCGAAGT+TGG | - | chr7_1:69436629-69436648 | None:intergenic | 50.0% | |
| TTTGGTGGGAACCATCATGC+TGG | - | chr7_1:69438695-69438714 | None:intergenic | 50.0% | |
| !! | GGCTGATAGGTTTGTTGTGC+AGG | + | chr7_1:69438985-69439004 | Msa1034040:intron | 50.0% |
| ! | CAGGAGGGTGTACAACTTTG+TGG | + | chr7_1:69439557-69439576 | Msa1034040:intron | 50.0% |
| GGGTAGTGTAAGTCCGAAGT+TGG | - | chr7_1:69436629-69436648 | None:intergenic | 50.0% | |
| GGCTATCAGAGACACTCTGT+CGG | - | chr7_1:69442406-69442425 | None:intergenic | 50.0% | |
| AATGAAGAGAGAAGGTGGGC+TGG | + | chr7_1:69442587-69442606 | Msa1034040:CDS | 50.0% | |
| GTGTGGTAGAGAAGAACCTG+AGG | + | chr7_1:69442619-69442638 | Msa1034040:CDS | 50.0% | |
| TGGTAGAGAAGAACCTGAGG+AGG | + | chr7_1:69442622-69442641 | Msa1034040:CDS | 50.0% | |
| GGTAGAGAAGAACCTGAGGA+GGG | + | chr7_1:69442623-69442642 | Msa1034040:CDS | 50.0% | |
| AACCTGAGGAGGGAAAGAGA+GGG | + | chr7_1:69442633-69442652 | Msa1034040:CDS | 50.0% | |
| AAGAGAGGGGAGTTGTTGTG+TGG | + | chr7_1:69442647-69442666 | Msa1034040:CDS | 50.0% | |
| ! | CTTCTGAGGAAGCCACTGAG+TGG | - | chr7_1:69434453-69434472 | None:intergenic | 55.0% |
| ACAAGAGCTCGACCATTCGC+AGG | - | chr7_1:69435148-69435167 | None:intergenic | 55.0% | |
| GTGTGTCAACATCTGCCGTC+TGG | + | chr7_1:69435381-69435400 | Msa1034040:intron | 55.0% | |
| CTTGTACCCGTGCATGGTAC+CGG | + | chr7_1:69436157-69436176 | Msa1034040:intron | 55.0% | |
| AGATACCCGTGCTACAGCAC+GGG | - | chr7_1:69440886-69440905 | None:intergenic | 55.0% | |
| GAGATACCCGTGCTACAGCA+CGG | - | chr7_1:69440887-69440906 | None:intergenic | 55.0% | |
| CAACGAAGTGGAGGCAACAG+TGG | + | chr7_1:69442356-69442375 | Msa1034040:CDS | 55.0% | |
| AGTGGAGGCAAATTCCAGCG+CGG | + | chr7_1:69442374-69442393 | Msa1034040:CDS | 55.0% | |
| GAACCTGAGGAGGGAAAGAG+AGG | + | chr7_1:69442632-69442651 | Msa1034040:CDS | 55.0% | |
| ACCTGAGGAGGGAAAGAGAG+GGG | + | chr7_1:69442634-69442653 | Msa1034040:CDS | 55.0% | |
| GCGCATCTTGTACCCGTGCA+TGG | + | chr7_1:69436151-69436170 | Msa1034040:intron | 60.0% | |
| ACATGGCCGGTACCATGCAC+GGG | - | chr7_1:69436166-69436185 | None:intergenic | 60.0% | |
| GACATGGCCGGTACCATGCA+CGG | - | chr7_1:69436167-69436186 | None:intergenic | 60.0% | |
| CGAAGTGGAGGCAACAGTGG+AGG | + | chr7_1:69442359-69442378 | Msa1034040:CDS | 60.0% | |
| !! | GAAGAGAGAAGGTGGGCTGG+TGG | + | chr7_1:69442590-69442609 | Msa1034040:CDS | 60.0% |
| !! | TGGGCTGGTGGTGGTTTGTG+TGG | + | chr7_1:69442602-69442621 | Msa1034040:CDS | 60.0% |
| TCCCCTCTCTTTCCCTCCTC+AGG | - | chr7_1:69442638-69442657 | None:intergenic | 60.0% | |
| TGTCGCGTCTCGGCTGTGCT+TGG | - | chr7_1:69440821-69440840 | None:intergenic | 65.0% | |
| GTGCTACAGCACGGGTAGCG+CGG | - | chr7_1:69440878-69440897 | None:intergenic | 65.0% | |
| GCGCTACCCGTGCTGTAGCA+CGG | + | chr7_1:69440877-69440896 | Msa1034040:intron | 65.0% | |
| CGCTACCCGTGCTGTAGCAC+GGG | + | chr7_1:69440878-69440897 | Msa1034040:intron | 65.0% | |
| GGAGGCAAATTCCAGCGCGG+TGG | + | chr7_1:69442377-69442396 | Msa1034040:CDS | 65.0% | |
| !! | GAGAGAAGGTGGGCTGGTGG+TGG | + | chr7_1:69442593-69442612 | Msa1034040:CDS | 65.0% |
| CACAGCCGAGACGCGACACG+CGG | + | chr7_1:69440823-69440842 | Msa1034040:intron | 70.0% | |
| TTCGCCGCGCTGTATGGCCG+CGG | - | chr7_1:69440854-69440873 | None:intergenic | 70.0% | |
| TCTGTCGGCAACCACCGCGC+TGG | - | chr7_1:69442391-69442410 | None:intergenic | 70.0% | |
| AGCCGAGACGCGACACGCGG+CGG | + | chr7_1:69440826-69440845 | Msa1034040:intron | 75.0% | |
| CTCCGCCGCGTGTCGCGTCT+CGG | - | chr7_1:69440831-69440850 | None:intergenic | 75.0% | |
| GGAGCCGCGGCCATACAGCG+CGG | + | chr7_1:69440847-69440866 | Msa1034040:intron | 75.0% | |
| CGCGGCTTCGCCGCGCTGTA+TGG | - | chr7_1:69440860-69440879 | None:intergenic | 75.0% | |
| ! | CGCGACACGCGGCGGAGCCG+CGG | + | chr7_1:69440834-69440853 | Msa1034040:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 69433523 | 69442691 | 69433523 | ID=Msa1034040;Name=Msa1034040 |
| chr7_1 | mRNA | 69433523 | 69442691 | 69433523 | ID=Msa1034040-mRNA-1;Parent=Msa1034040;Name=Msa1034040-mRNA-1;_AED=0.66;_eAED=0.66;_QI=0|0|0|0.66|1|1|3|0|151 |
| chr7_1 | exon | 69433523 | 69433738 | 69433523 | ID=Msa1034040-mRNA-1:exon:16323;Parent=Msa1034040-mRNA-1 |
| chr7_1 | exon | 69442296 | 69442412 | 69442296 | ID=Msa1034040-mRNA-1:exon:16324;Parent=Msa1034040-mRNA-1 |
| chr7_1 | exon | 69442569 | 69442691 | 69442569 | ID=Msa1034040-mRNA-1:exon:16325;Parent=Msa1034040-mRNA-1 |
| chr7_1 | CDS | 69433523 | 69433738 | 69433523 | ID=Msa1034040-mRNA-1:cds;Parent=Msa1034040-mRNA-1 |
| chr7_1 | CDS | 69442296 | 69442412 | 69442296 | ID=Msa1034040-mRNA-1:cds;Parent=Msa1034040-mRNA-1 |
| chr7_1 | CDS | 69442569 | 69442691 | 69442569 | ID=Msa1034040-mRNA-1:cds;Parent=Msa1034040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
