AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1144380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1144380 MtrunA17_Chr4g0035951 96.000 400 14 2 1 398 1 400 0.0 781
Msa1144380 MtrunA17_Chr4g0028361 95.750 400 15 2 1 398 1 400 0.0 780
Msa1144380 MtrunA17_Chr1g0208981 83.146 356 59 1 43 398 37 391 0.0 617
Msa1144380 MtrunA17_Chr4g0035981 96.203 237 9 0 162 398 4 240 3.59e-170 475
Msa1144380 MtrunA17_Chr7g0265821 56.250 352 149 4 51 398 8 358 4.90e-135 390
Msa1144380 MtrunA17_Chr5g0429051 56.534 352 148 4 51 398 8 358 2.11e-134 389
Msa1144380 MtrunA17_Chr5g0447091 56.091 353 151 3 49 398 6 357 4.72e-133 385
Msa1144380 MtrunA17_Chr1g0179211 54.545 352 155 4 51 398 8 358 1.57e-128 374
Msa1144380 MtrunA17_Chr4g0035971 96.377 138 5 0 1 138 1 138 3.04e-89 266
Msa1144380 MtrunA17_Chr5g0429031 53.782 238 109 1 15 251 13 250 3.65e-79 244
Msa1144380 MtrunA17_Chr5g0429021 52.273 132 59 3 270 398 1 131 1.87e-36 129
Msa1144380 MtrunA17_Chr7g0265811 46.809 94 26 1 155 248 21 90 2.37e-20 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1144380 AT2G21330.1 83.333 402 60 5 1 398 1 399 0.0 682
Msa1144380 AT4G38970.1 83.166 398 63 3 4 398 2 398 0.0 674
Msa1144380 AT2G21330.3 80.846 402 60 6 1 398 1 389 0.0 653
Msa1144380 AT2G01140.1 75.949 395 90 2 4 398 2 391 0.0 619
Msa1144380 AT2G21330.2 83.226 310 45 5 1 306 1 307 0.0 519
Msa1144380 AT4G38970.2 78.947 323 57 4 4 316 2 323 0.0 512
Msa1144380 AT4G26530.1 57.062 354 147 4 49 398 6 358 6.42e-137 395
Msa1144380 AT4G26530.3 57.062 354 147 4 49 398 6 358 6.42e-137 395
Msa1144380 AT4G26530.2 57.062 354 147 4 49 398 6 358 6.42e-137 395
Msa1144380 AT2G36460.1 56.534 352 148 4 51 398 8 358 1.62e-134 389
Msa1144380 AT3G52930.1 55.398 352 152 4 51 398 8 358 5.65e-132 383
Msa1144380 AT5G03690.2 55.398 352 153 3 51 398 8 359 3.51e-129 376
Msa1144380 AT4G26520.1 55.398 352 152 4 51 398 8 358 3.22e-127 371
Msa1144380 AT4G26520.3 55.556 351 151 4 51 397 8 357 1.20e-126 369
Msa1144380 AT4G26520.2 55.271 351 152 4 52 398 6 355 2.93e-126 368
Msa1144380 AT4G26520.4 55.271 351 152 4 52 398 6 355 2.93e-126 368
Msa1144380 AT5G03690.1 55.301 349 152 3 54 398 45 393 4.11e-126 369
Msa1144380 AT2G36460.3 55.970 268 113 4 135 398 1 267 3.06e-98 294
Msa1144380 AT2G36460.2 55.970 268 113 4 135 398 1 267 3.06e-98 294
Msa1144380 AT5G03690.3 54.307 267 118 3 136 398 1 267 1.63e-91 276
Msa1144380 AT5G03690.4 54.307 267 118 3 136 398 1 267 1.63e-91 276

Find 152 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTTTATGTTCTATCATTT+TGG 0.179738 7_4:-20315484 None:intergenic
TTTGACAAACAATTCCTTCT+TGG 0.220264 7_4:-20315236 None:intergenic
TTCTGCATTGCTGGTTTAAA+TGG 0.221504 7_4:-20312371 None:intergenic
TTGTCCTTGCACTCAGCTCC+TGG 0.246307 7_4:-20314762 None:intergenic
GTCACCAGGTCGTGGTATTT+TGG 0.250260 7_4:+20313554 Msa1144380:CDS
TAGGGTTTGGTGCCCCTTGC+TGG 0.266781 7_4:+20314002 Msa1144380:intron
TGCTTGGTATTCTGCATTGC+TGG 0.303849 7_4:-20312380 None:intergenic
GGGAAGCGTTTGGCTTCAAT+TGG 0.313845 7_4:+20313603 Msa1144380:CDS
CCAAGCATGGCGTACCCTTC+TGG 0.314758 7_4:+20313650 Msa1144380:CDS
TTGAAGTAGCACAAAAGGTT+TGG 0.329064 7_4:+20314664 Msa1144380:CDS
CGTGCCATGGGTTTGGAGAT+TGG 0.341879 7_4:-20315051 None:intergenic
ACCATGATACCAGGGACAGC+TGG 0.345678 7_4:-20314843 None:intergenic
ATTGAGCAAAACATTGTTCC+TGG 0.351278 7_4:+20313774 Msa1144380:CDS
AAGATCTCTGGTTCCACAAT+TGG 0.357070 7_4:-20314609 None:intergenic
TGAGGAGAATGCCCTCAAAT+TGG 0.371449 7_4:-20314722 None:intergenic
CTCTGGTGCCATTCTCTTTG+AGG 0.372847 7_4:+20313701 Msa1144380:CDS
TGAAGTAGCACAAAAGGTTT+GGG 0.375792 7_4:+20314665 Msa1144380:CDS
CTGGTGACAGTTCCATCTCT+TGG 0.383065 7_4:+20313669 Msa1144380:CDS
TGGCAAAACGAGCACCTTGC+TGG 0.386451 7_4:-20314088 None:intergenic
AACGACACGTGCCATGGGTT+TGG 0.390092 7_4:-20315058 None:intergenic
TGCTACTTGTGGGAAGCGTT+TGG 0.390936 7_4:+20313593 Msa1144380:CDS
CCCAGCTGTCCCTGGTATCA+TGG 0.393404 7_4:+20314842 Msa1144380:CDS
CAAGGAAGCAGCCTGGGGTC+TGG 0.397653 7_4:+20314288 Msa1144380:CDS
TGGGTTTGGAGATTGGTTCA+TGG 0.399088 7_4:-20315044 None:intergenic
ATGTCTTCAAAGCGGTGTTT+TGG 0.400162 7_4:-20315099 None:intergenic
GCTCTGATAGTGAGACTTGA+TGG 0.402824 7_4:-20312706 None:intergenic
GTATAGTCAGCAACTGTTGC+AGG 0.413690 7_4:-20314792 None:intergenic
TGCAGTCAAGGAAGCAGCCT+GGG 0.414972 7_4:+20314282 Msa1144380:CDS
GCAAGAGCAGAGGGACCATT+GGG 0.415270 7_4:-20314262 None:intergenic
TGTCCTTGCACTCAGCTCCT+GGG 0.419395 7_4:-20314761 None:intergenic
TACAACTTAATAACATCTCT+TGG 0.423757 7_4:+20315420 Msa1144380:three_prime_UTR
GTAAAGAGGTTCATTGTTTG+AGG 0.425568 7_4:+20312527 Msa1144380:five_prime_UTR
TCCTTCCATCTGTTGTGGAT+TGG 0.437495 7_4:-20313734 None:intergenic
AGCACAAAAGGTTTGGGCTG+AGG 0.454604 7_4:+20314671 Msa1144380:CDS
AGTTGGACTTAGCACGGAAA+AGG 0.464478 7_4:-20315165 None:intergenic
TCCAACTCAATTGCTCAACT+TGG 0.471150 7_4:+20315181 Msa1144380:CDS
GAACCAGAGATCTTGCTTGA+TGG 0.472497 7_4:+20314618 Msa1144380:CDS
GTTCATGGCATTCAAGTTGA+GGG 0.472908 7_4:-20315029 None:intergenic
AATCTTCCTTCCATCTGTTG+TGG 0.472992 7_4:-20313739 None:intergenic
TGAGAACAATGTCCAATTTG+AGG 0.474283 7_4:+20314710 Msa1144380:CDS
AATTAATGACGGAAAATGAA+TGG 0.474522 7_4:+20315316 Msa1144380:three_prime_UTR
AGATCTCTGGTTCCACAATT+GGG 0.476937 7_4:-20314608 None:intergenic
TGCAAGAGCAGAGGGACCAT+TGG 0.484583 7_4:-20314263 None:intergenic
CCAGAAGGGTACGCCATGCT+TGG 0.485923 7_4:-20313650 None:intergenic
TCCCTCTGCTCTTGCAGTCA+AGG 0.489422 7_4:+20314270 Msa1144380:CDS
GCTCCTGGGGTAACCATGCT+AGG 0.489761 7_4:-20314747 None:intergenic
TTGGCACCATGACTCATCAT+TGG 0.492416 7_4:-20314027 None:intergenic
GTGAAGTGATGTCTCATTTG+AGG 0.492762 7_4:-20312453 None:intergenic
GCATTGCTGGTTTAAATGGA+TGG 0.494200 7_4:-20312367 None:intergenic
TCGCTACGCTGCAATTAGTC+AGG 0.494622 7_4:+20314312 Msa1144380:CDS
TTGCAGTCAAGGAAGCAGCC+TGG 0.495043 7_4:+20314281 Msa1144380:CDS
GTGAGACTTGATGGAGCGGC+GGG 0.496907 7_4:-20312697 None:intergenic
AGGCCGCATAGAGAACGTTC+AGG 0.498349 7_4:+20315126 Msa1144380:CDS
TCCACATGTCAAGTGATGAT+AGG 0.498626 7_4:+20312416 Msa1144380:five_prime_UTR
TCTCTTGGAGAGTACATCTC+TGG 0.498855 7_4:+20313684 Msa1144380:CDS
GGAAGCGTTTGGCTTCAATT+GGG 0.502252 7_4:+20313604 Msa1144380:CDS
GCATAAGTTGTGTGGTAAAG+AGG 0.506024 7_4:+20312513 Msa1144380:five_prime_UTR
AAGAAGGAATTGTTTGTCAA+AGG 0.507696 7_4:+20315238 Msa1144380:CDS
GAGAACAATGTCCAATTTGA+GGG 0.514083 7_4:+20314711 Msa1144380:CDS
CTCATCATTGGAACCAGCAA+GGG 0.517446 7_4:-20314015 None:intergenic
CCATGCTTGGCGGTTAACTT+CGG 0.520579 7_4:-20313637 None:intergenic
TCCTTGACTGCAAGAGCAGA+GGG 0.521193 7_4:-20314271 None:intergenic
ACCTTGTCAACTTTGATACC+AGG 0.524302 7_4:-20313792 None:intergenic
TTCTCCTGTGAAGGAGCTTG+AGG 0.524713 7_4:-20314815 None:intergenic
CTCTACCAATCCACAACAGA+TGG 0.525359 7_4:+20313729 Msa1144380:CDS
TTGTTCTTGACAAGTCTGAA+TGG 0.530442 7_4:+20312623 Msa1144380:CDS
GGTTCATGGCATTCAAGTTG+AGG 0.530771 7_4:-20315030 None:intergenic
TATGAGAACGACACGTGCCA+TGG 0.532775 7_4:-20315064 None:intergenic
CAACGGATTGGTCCCAATTG+TGG 0.534112 7_4:+20314596 Msa1144380:CDS
ATACCCTCAAGCTCCTTCAC+AGG 0.534468 7_4:+20314811 Msa1144380:CDS
AAAACACCGCTTTGAAGACA+TGG 0.536857 7_4:+20315101 Msa1144380:CDS
TAAAGAGGTTCATTGTTTGA+GGG 0.536953 7_4:+20312528 Msa1144380:five_prime_UTR
TCTCCATCAAGCAAGATCTC+TGG 0.540606 7_4:-20314621 None:intergenic
TCTCCTGTGAAGGAGCTTGA+GGG 0.542263 7_4:-20314814 None:intergenic
CAGAAAACAATTGCGTCACC+AGG 0.544188 7_4:+20313540 Msa1144380:intron
GTCAGCAACTGTTGCAGGAG+AGG 0.545139 7_4:-20314787 None:intergenic
CCATGATACCAGGGACAGCT+GGG 0.545501 7_4:-20314842 None:intergenic
ACGCTTCCCACAAGTAGCAT+TGG 0.547732 7_4:-20313589 None:intergenic
TGTTCTTGACAAGTCTGAAT+GGG 0.550387 7_4:+20312624 Msa1144380:CDS
GAGAGTCTCCTCAAAGAGAA+TGG 0.550591 7_4:-20313709 None:intergenic
TGAATCTGAGGAAGCCAAGA+AGG 0.552492 7_4:+20315222 Msa1144380:CDS
GTCCTTGCACTCAGCTCCTG+GGG 0.552893 7_4:-20314760 None:intergenic
CACTGGTGAGGGTGAATCTG+AGG 0.554064 7_4:+20315210 Msa1144380:CDS
GAAGGGTACGCCATGCTTGG+CGG 0.555457 7_4:-20313647 None:intergenic
TCCAAGTTGAGCAATTGAGT+TGG 0.559400 7_4:-20315182 None:intergenic
AGCGTAGCGAGCCAGACCCC+AGG 0.559466 7_4:-20314299 None:intergenic
TCAAGTCTCACTATCAGAGC+TGG 0.559579 7_4:+20312709 Msa1144380:CDS
GGATGATAACAATGCTTGCT+TGG 0.562542 7_4:-20312396 None:intergenic
AGGAGCTGAGTGCAAGGACA+AGG 0.565868 7_4:+20314764 Msa1144380:CDS
ATCTTGCTTGATGGAGAACA+TGG 0.567139 7_4:+20314627 Msa1144380:CDS
ACCTATCATCACTTGACATG+TGG 0.567903 7_4:-20312417 None:intergenic
GGTTTATTAGGACAACGGAT+TGG 0.572758 7_4:+20314584 Msa1144380:intron
TACCCCAGGAGCTGAGTGCA+AGG 0.573997 7_4:+20314758 Msa1144380:CDS
ACAATTGCGTCACCAGGTCG+TGG 0.577031 7_4:+20313546 Msa1144380:CDS
CAATTGAGTTGGACTTAGCA+CGG 0.579344 7_4:-20315171 None:intergenic
TTTGTCTGGTGGACAATCTG+AGG 0.579742 7_4:+20314997 Msa1144380:CDS
GTGTCACATACCATGATACC+AGG 0.579988 7_4:-20314852 None:intergenic
TGACAAGTCTGAATGGGTGA+AGG 0.580261 7_4:+20312630 Msa1144380:CDS
AAGCCTAGCATGGTTACCCC+AGG 0.582649 7_4:+20314744 Msa1144380:CDS
AGTAGCATTGGACTCATCCA+TGG 0.582662 7_4:-20313577 None:intergenic
CGCGGTCTTAACGAGCTCAT+CGG 0.585953 7_4:-20312740 None:intergenic
ACTCATCATTGGAACCAGCA+AGG 0.586276 7_4:-20314016 None:intergenic
ATGAGAACGACACGTGCCAT+GGG 0.588604 7_4:-20315063 None:intergenic
CTGGTTCCAATGATGAGTCA+TGG 0.590508 7_4:+20314021 Msa1144380:CDS
AATGATGAGTCATGGTGCCA+AGG 0.590718 7_4:+20314029 Msa1144380:CDS
CATTCTCCTCAAGCCTAGCA+TGG 0.591042 7_4:+20314734 Msa1144380:CDS
GACAAGTCTGAATGGGTGAA+GGG 0.591129 7_4:+20312631 Msa1144380:CDS
TTCCTTGACTGCAAGAGCAG+AGG 0.592530 7_4:-20314272 None:intergenic
CAGCGGACACAGAAGATTGA+CGG 0.592543 7_4:-20312663 None:intergenic
AGGCAAGACCGTCTAGACCT+TGG 0.593561 7_4:-20314046 None:intergenic
GAGATGGAACTGTCACCAGA+AGG 0.597318 7_4:-20313665 None:intergenic
TCATGGTGCCAAGGTCTAGA+CGG 0.600249 7_4:+20314038 Msa1144380:CDS
GAGATGTACTCTCCAAGAGA+TGG 0.600655 7_4:-20313681 None:intergenic
AAAGAAGTGCATAAGTTGTG+TGG 0.601057 7_4:+20312505 Msa1144380:five_prime_UTR
CCGAAGTTAACCGCCAAGCA+TGG 0.601093 7_4:+20313637 Msa1144380:CDS
ATGAGTCCAATGCTACTTGT+GGG 0.603827 7_4:+20313583 Msa1144380:CDS
ATTGGACATTGTTCTCAGCA+AGG 0.604841 7_4:-20314704 None:intergenic
TCCTGGTATCAAAGTTGACA+AGG 0.608575 7_4:+20313791 Msa1144380:CDS
TTAATGGTTTATTAGGACAA+CGG 0.610985 7_4:+20314579 Msa1144380:intron
GGGTAACCATGCTAGGCTTG+AGG 0.616311 7_4:-20314740 None:intergenic
CTTGGAAAGTACACTGGTGA+GGG 0.616339 7_4:+20315199 Msa1144380:CDS
GAAAAGAGATGCTGATGCAG+AGG 0.620632 7_4:-20312590 None:intergenic
AGTGAGACTTGATGGAGCGG+CGG 0.624081 7_4:-20312698 None:intergenic
AAACACCGCTTTGAAGACAT+GGG 0.624450 7_4:+20315102 Msa1144380:CDS
GCAGCATCAACAATTAATGA+CGG 0.626376 7_4:+20315305 Msa1144380:three_prime_UTR
ACCAATCCACAACAGATGGA+AGG 0.626896 7_4:+20313733 Msa1144380:CDS
ACTTGGAAAGTACACTGGTG+AGG 0.631708 7_4:+20315198 Msa1144380:CDS
GATGAGTCCAATGCTACTTG+TGG 0.631942 7_4:+20313582 Msa1144380:CDS
ACCGCTTTGAAGACATGGGG+AGG 0.635657 7_4:+20315106 Msa1144380:CDS
ACTGTTGTGAGCATCCCCAA+TGG 0.641479 7_4:+20314247 Msa1144380:CDS
AGATGGAACTGTCACCAGAA+GGG 0.643682 7_4:-20313664 None:intergenic
GTAGTATGCAGCTGAACGAG+AGG 0.646365 7_4:-20314066 None:intergenic
GCAGTCAAGGAAGCAGCCTG+GGG 0.647968 7_4:+20314283 Msa1144380:CDS
TGAACCAATCTCCAAACCCA+TGG 0.649676 7_4:+20315047 Msa1144380:CDS
GGCGGGGCTGCATCGTACAG+CGG 0.653649 7_4:-20312680 None:intergenic
GCTCAACTTGGAAAGTACAC+TGG 0.658104 7_4:+20315193 Msa1144380:CDS
GCCTCCCCATGTCTTCAAAG+CGG 0.661856 7_4:-20315107 None:intergenic
CATGATACCAGGGACAGCTG+GGG 0.665632 7_4:-20314841 None:intergenic
TCATCATTGGAACCAGCAAG+GGG 0.668545 7_4:-20314014 None:intergenic
TCAGCTGCATACTACCAGCA+AGG 0.670241 7_4:+20314074 Msa1144380:CDS
ATGATACCAGGGACAGCTGG+GGG 0.672628 7_4:-20314840 None:intergenic
ATGGCCAAAATACCACGACC+TGG 0.675188 7_4:-20313558 None:intergenic
GATAGTGAGACTTGATGGAG+CGG 0.675319 7_4:-20312701 None:intergenic
TCTTGTTAGACAGTAAACAA+TGG 0.685628 7_4:+20312567 Msa1144380:exon
CGGACACAGAAGATTGACGG+AGG 0.692714 7_4:-20312660 None:intergenic
TGAGACTTGATGGAGCGGCG+GGG 0.708924 7_4:-20312696 None:intergenic
CAAGAGCAGAGGGACCATTG+GGG 0.710291 7_4:-20314261 None:intergenic
AACACCGCTTTGAAGACATG+GGG 0.711193 7_4:+20315103 Msa1144380:CDS
CTGCCTGAACGTTCTCTATG+CGG 0.711654 7_4:-20315129 None:intergenic
GGACACAGAAGATTGACGGA+GGG 0.715557 7_4:-20312659 None:intergenic
CGATGAGCTCGTTAAGACCG+CGG 0.717465 7_4:+20312741 Msa1144380:CDS
TGTCACATACCATGATACCA+GGG 0.730745 7_4:-20314851 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAATGAACTATAATT+TGG - chr7_4:20312332-20312351 None:intergenic 10.0%
!!! ATTATAGTTCATTTTTTAAA+CGG + chr7_4:20312333-20312352 Msa1144380:five_prime_UTR 10.0%
!!! TTACATAAATAATTTTATCA+AGG + chr7_4:20314384-20314403 Msa1144380:intron 10.0%
!!! TTAAAAAGTTTGTTTAAAAA+TGG - chr7_4:20315530-20315549 None:intergenic 10.0%
!!! GTTTTTTAAGTTATACTAAT+CGG - chr7_4:20312792-20312811 None:intergenic 15.0%
!!! AACATTTTATTTTATTCCAA+TGG - chr7_4:20313235-20313254 None:intergenic 15.0%
!!! ATATTTTTTTCTAGAAAGTA+TGG + chr7_4:20313403-20313422 Msa1144380:intron 15.0%
!!! TATTTTTTTCTAGAAAGTAT+GGG + chr7_4:20313404-20313423 Msa1144380:intron 15.0%
!! GCTAAAATTTATTCATTTAA+TGG + chr7_4:20314563-20314582 Msa1144380:intron 15.0%
!! TATTCATTTAATGGTTTATT+AGG + chr7_4:20314572-20314591 Msa1144380:intron 15.0%
!! TATGAACAAAGATAAAAATT+TGG - chr7_4:20314904-20314923 None:intergenic 15.0%
!!! ATGTTAAAAAGAAATCATTT+TGG - chr7_4:20315507-20315526 None:intergenic 15.0%
!! AATCAATTGTATAATTTGAG+TGG - chr7_4:20314346-20314365 None:intergenic 20.0%
!! TTATAATATTATGTAACTGC+AGG - chr7_4:20314478-20314497 None:intergenic 20.0%
!! AATACAAAGAACAATGTATT+TGG - chr7_4:20314881-20314900 None:intergenic 20.0%
!! CAAAATACAATATACAACTT+TGG - chr7_4:20314965-20314984 None:intergenic 20.0%
! TTCTAGCATATGTGTTTAAT+CGG - chr7_4:20312818-20312837 None:intergenic 25.0%
!!! TAATTCTTTTTTTTGCGTAG+TGG + chr7_4:20312867-20312886 Msa1144380:intron 25.0%
!!! AATTCTTTTTTTTGCGTAGT+GGG + chr7_4:20312868-20312887 Msa1144380:intron 25.0%
! AAAAAGTAGACTTAAGAAAG+TGG + chr7_4:20313152-20313171 Msa1144380:intron 25.0%
! AAAAGTAGACTTAAGAAAGT+GGG + chr7_4:20313153-20313172 Msa1144380:intron 25.0%
! TGAAATTCTTAAAACTGATG+TGG + chr7_4:20313254-20313273 Msa1144380:intron 25.0%
! TTACATTGTTCATGTTTCTT+TGG + chr7_4:20313474-20313493 Msa1144380:intron 25.0%
!! ACTCTATGTAACTACATTTT+TGG + chr7_4:20313827-20313846 Msa1144380:intron 25.0%
!!! ATTTTAATTTTGCTTCCACA+GGG - chr7_4:20314137-20314156 None:intergenic 25.0%
!!! AATTTTAATTTTGCTTCCAC+AGG - chr7_4:20314138-20314157 None:intergenic 25.0%
! GGAAGCAAAATTAAAATTTC+AGG + chr7_4:20314140-20314159 Msa1144380:intron 25.0%
! ATATGTGATTGAAATTCACA+TGG - chr7_4:20314220-20314239 None:intergenic 25.0%
! GTGAATTTCAATCACATATT+AGG + chr7_4:20314221-20314240 Msa1144380:intron 25.0%
! ATGAGATTGATTAAAAACCT+CGG + chr7_4:20314541-20314560 Msa1144380:intron 25.0%
!!! AAATGAATAAATTTTAGCCG+AGG - chr7_4:20314561-20314580 None:intergenic 25.0%
! TTAATGGTTTATTAGGACAA+CGG + chr7_4:20314579-20314598 Msa1144380:intron 25.0%
!! TGTTATGTATAGTTTTTGTC+TGG + chr7_4:20314983-20315002 Msa1144380:intron 25.0%
!! AATTAATGACGGAAAATGAA+TGG + chr7_4:20315316-20315335 Msa1144380:three_prime_UTR 25.0%
!!! GTGTAATGTTTTTATAGTCT+TGG + chr7_4:20315365-20315384 Msa1144380:three_prime_UTR 25.0%
! TACAACTTAATAACATCTCT+TGG + chr7_4:20315420-20315439 Msa1144380:three_prime_UTR 25.0%
!! TGGTTTATGTTCTATCATTT+TGG - chr7_4:20315487-20315506 None:intergenic 25.0%
TAAAGAGGTTCATTGTTTGA+GGG + chr7_4:20312528-20312547 Msa1144380:five_prime_UTR 30.0%
TCTTGTTAGACAGTAAACAA+TGG + chr7_4:20312567-20312586 Msa1144380:exon 30.0%
TTAAGTTAAGTATCATACCG+CGG - chr7_4:20312761-20312780 None:intergenic 30.0%
!! TAGTTTTCAAACTAGCTTGT+TGG + chr7_4:20312895-20312914 Msa1144380:intron 30.0%
GTTAAACCATGTATACTAAG+TGG + chr7_4:20312917-20312936 Msa1144380:intron 30.0%
! ATGCTCTAAGTAGATAAACA+TGG - chr7_4:20313014-20313033 None:intergenic 30.0%
ATGGAAAGGGACATTAAAAA+TGG + chr7_4:20313278-20313297 Msa1144380:intron 30.0%
!!! TATTTTTTGTTGCTTGTGTG+TGG + chr7_4:20313514-20313533 Msa1144380:intron 30.0%
CAAAGTTGACAAGGTATATT+TGG + chr7_4:20313800-20313819 Msa1144380:intron 30.0%
TAATAGTATCAACTAGCACT+CGG - chr7_4:20313909-20313928 None:intergenic 30.0%
CATAAGTAGACACATAAGTA+TGG - chr7_4:20313958-20313977 None:intergenic 30.0%
TTCTGTGACTATGAACAATA+GGG + chr7_4:20313984-20314003 Msa1144380:intron 30.0%
TCAAATAGACACTAACCATT+TGG - chr7_4:20314111-20314130 None:intergenic 30.0%
!!! TTTTAATTTTGCTTCCACAG+GGG - chr7_4:20314136-20314155 None:intergenic 30.0%
CATTAAAAACCTTGATGTTG+CGG - chr7_4:20314440-20314459 None:intergenic 30.0%
! CATCAAGGTTTTTAATGTCT+TGG + chr7_4:20314443-20314462 Msa1144380:intron 30.0%
!!! AACTTTTGAAGTAGCACAAA+AGG + chr7_4:20314659-20314678 Msa1144380:CDS 30.0%
! TATGTATAGTTTTTGTCTGG+TGG + chr7_4:20314986-20315005 Msa1144380:intron 30.0%
TTTGACAAACAATTCCTTCT+TGG - chr7_4:20315239-20315258 None:intergenic 30.0%
AAGAAGGAATTGTTTGTCAA+AGG + chr7_4:20315238-20315257 Msa1144380:CDS 30.0%
!!! TTGGAGACTATTTTTGTTTG+TGG + chr7_4:20315384-20315403 Msa1144380:three_prime_UTR 30.0%
!! TTCTGCATTGCTGGTTTAAA+TGG - chr7_4:20312374-20312393 None:intergenic 35.0%
! AAAGAAGTGCATAAGTTGTG+TGG + chr7_4:20312505-20312524 Msa1144380:five_prime_UTR 35.0%
GTAAAGAGGTTCATTGTTTG+AGG + chr7_4:20312527-20312546 Msa1144380:five_prime_UTR 35.0%
TTGTTCTTGACAAGTCTGAA+TGG + chr7_4:20312623-20312642 Msa1144380:CDS 35.0%
TGTTCTTGACAAGTCTGAAT+GGG + chr7_4:20312624-20312643 Msa1144380:CDS 35.0%
GTTAGGAACAGGTTCTTATT+TGG + chr7_4:20313063-20313082 Msa1144380:intron 35.0%
TTTGGTTATACCACTAGAGT+TGG + chr7_4:20313081-20313100 Msa1144380:intron 35.0%
TGAAATTCAACCAACTCTAG+TGG - chr7_4:20313094-20313113 None:intergenic 35.0%
! AGAGTTGGTTGAATTTCATG+TGG + chr7_4:20313096-20313115 Msa1144380:intron 35.0%
AAGGAGTTGAAAGTGAGATA+AGG + chr7_4:20313184-20313203 Msa1144380:intron 35.0%
TGAGATACATGTTACACCAT+TGG + chr7_4:20313216-20313235 Msa1144380:intron 35.0%
TTCTTAAAACTGATGTGGCA+TGG + chr7_4:20313259-20313278 Msa1144380:intron 35.0%
ATTGAGCAAAACATTGTTCC+TGG + chr7_4:20313774-20313793 Msa1144380:CDS 35.0%
TGGATGGTAGTAGAAATAAG+CGG - chr7_4:20313938-20313957 None:intergenic 35.0%
AGTAGACACATAAGTATGGA+TGG - chr7_4:20313954-20313973 None:intergenic 35.0%
GTTCTGTGACTATGAACAAT+AGG + chr7_4:20313983-20314002 Msa1144380:intron 35.0%
TGACTATGAACAATAGGGTT+TGG + chr7_4:20313989-20314008 Msa1144380:intron 35.0%
!! TTTAATTTTGCTTCCACAGG+GGG - chr7_4:20314135-20314154 None:intergenic 35.0%
! GTTTTTAATGTCTTGGCAGT+TGG + chr7_4:20314450-20314469 Msa1144380:intron 35.0%
TTGAAGTAGCACAAAAGGTT+TGG + chr7_4:20314664-20314683 Msa1144380:CDS 35.0%
TGAAGTAGCACAAAAGGTTT+GGG + chr7_4:20314665-20314684 Msa1144380:CDS 35.0%
TGAGAACAATGTCCAATTTG+AGG + chr7_4:20314710-20314729 Msa1144380:CDS 35.0%
GAGAACAATGTCCAATTTGA+GGG + chr7_4:20314711-20314730 Msa1144380:CDS 35.0%
GCAGCATCAACAATTAATGA+CGG + chr7_4:20315305-20315324 Msa1144380:three_prime_UTR 35.0%
!! GCATTGCTGGTTTAAATGGA+TGG - chr7_4:20312370-20312389 None:intergenic 40.0%
GGATGATAACAATGCTTGCT+TGG - chr7_4:20312399-20312418 None:intergenic 40.0%
TCCACATGTCAAGTGATGAT+AGG + chr7_4:20312416-20312435 Msa1144380:five_prime_UTR 40.0%
ACCTATCATCACTTGACATG+TGG - chr7_4:20312420-20312439 None:intergenic 40.0%
GTGAAGTGATGTCTCATTTG+AGG - chr7_4:20312456-20312475 None:intergenic 40.0%
GCATAAGTTGTGTGGTAAAG+AGG + chr7_4:20312513-20312532 Msa1144380:five_prime_UTR 40.0%
CTAGTTGAGCTCTTGAAGTT+AGG + chr7_4:20313046-20313065 Msa1144380:intron 40.0%
AGACTTAAGAAAGTGGGTGA+AGG + chr7_4:20313159-20313178 Msa1144380:intron 40.0%
AAGAAAGTGGGTGAAGGAAA+AGG + chr7_4:20313165-20313184 Msa1144380:intron 40.0%
AAAACTGATGTGGCATGGAA+AGG + chr7_4:20313264-20313283 Msa1144380:intron 40.0%
AAACTGATGTGGCATGGAAA+GGG + chr7_4:20313265-20313284 Msa1144380:intron 40.0%
! ATGAGTCCAATGCTACTTGT+GGG + chr7_4:20313583-20313602 Msa1144380:CDS 40.0%
AATCTTCCTTCCATCTGTTG+TGG - chr7_4:20313742-20313761 None:intergenic 40.0%
TCCTGGTATCAAAGTTGACA+AGG + chr7_4:20313791-20313810 Msa1144380:CDS 40.0%
ACCTTGTCAACTTTGATACC+AGG - chr7_4:20313795-20313814 None:intergenic 40.0%
TTGATGTTGCGGTTAAAGTC+GGG - chr7_4:20314429-20314448 None:intergenic 40.0%
CTTGATGTTGCGGTTAAAGT+CGG - chr7_4:20314430-20314449 None:intergenic 40.0%
GGTTTATTAGGACAACGGAT+TGG + chr7_4:20314584-20314603 Msa1144380:intron 40.0%
! AGATCTCTGGTTCCACAATT+GGG - chr7_4:20314611-20314630 None:intergenic 40.0%
! AAGATCTCTGGTTCCACAAT+TGG - chr7_4:20314612-20314631 None:intergenic 40.0%
ATCTTGCTTGATGGAGAACA+TGG + chr7_4:20314627-20314646 Msa1144380:CDS 40.0%
ATTGGACATTGTTCTCAGCA+AGG - chr7_4:20314707-20314726 None:intergenic 40.0%
TGTCACATACCATGATACCA+GGG - chr7_4:20314854-20314873 None:intergenic 40.0%
!! GTTCATGGCATTCAAGTTGA+GGG - chr7_4:20315032-20315051 None:intergenic 40.0%
! ATGTCTTCAAAGCGGTGTTT+TGG - chr7_4:20315102-20315121 None:intergenic 40.0%
!! AAAACACCGCTTTGAAGACA+TGG + chr7_4:20315101-20315120 Msa1144380:CDS 40.0%
!! AAACACCGCTTTGAAGACAT+GGG + chr7_4:20315102-20315121 Msa1144380:CDS 40.0%
!! CAATTGAGTTGGACTTAGCA+CGG - chr7_4:20315174-20315193 None:intergenic 40.0%
TCCAACTCAATTGCTCAACT+TGG + chr7_4:20315181-20315200 Msa1144380:CDS 40.0%
! TCCAAGTTGAGCAATTGAGT+TGG - chr7_4:20315185-20315204 None:intergenic 40.0%
TGCTTGGTATTCTGCATTGC+TGG - chr7_4:20312383-20312402 None:intergenic 45.0%
GAAAAGAGATGCTGATGCAG+AGG - chr7_4:20312593-20312612 None:intergenic 45.0%
TGACAAGTCTGAATGGGTGA+AGG + chr7_4:20312630-20312649 Msa1144380:CDS 45.0%
GACAAGTCTGAATGGGTGAA+GGG + chr7_4:20312631-20312650 Msa1144380:CDS 45.0%
GATAGTGAGACTTGATGGAG+CGG - chr7_4:20312704-20312723 None:intergenic 45.0%
! GCTCTGATAGTGAGACTTGA+TGG - chr7_4:20312709-20312728 None:intergenic 45.0%
TCAAGTCTCACTATCAGAGC+TGG + chr7_4:20312709-20312728 Msa1144380:CDS 45.0%
TAAGTGGCCGACCACTTAAT+GGG + chr7_4:20312933-20312952 Msa1144380:intron 45.0%
GCCTTATCCCATTAAGTGGT+CGG - chr7_4:20312943-20312962 None:intergenic 45.0%
! CCAAGCCTTATCCCATTAAG+TGG - chr7_4:20312947-20312966 None:intergenic 45.0%
CCACTTAATGGGATAAGGCT+TGG + chr7_4:20312944-20312963 Msa1144380:intron 45.0%
GAGCTCTTGAAGTTAGGAAC+AGG + chr7_4:20313052-20313071 Msa1144380:intron 45.0%
CTGCATCAACAATGCGAAAG+TGG - chr7_4:20313367-20313386 None:intergenic 45.0%
CAGAAAACAATTGCGTCACC+AGG + chr7_4:20313540-20313559 Msa1144380:intron 45.0%
! AGTAGCATTGGACTCATCCA+TGG - chr7_4:20313580-20313599 None:intergenic 45.0%
! GATGAGTCCAATGCTACTTG+TGG + chr7_4:20313582-20313601 Msa1144380:CDS 45.0%
!! GGAAGCGTTTGGCTTCAATT+GGG + chr7_4:20313604-20313623 Msa1144380:CDS 45.0%
AGATGGAACTGTCACCAGAA+GGG - chr7_4:20313667-20313686 None:intergenic 45.0%
GAGATGTACTCTCCAAGAGA+TGG - chr7_4:20313684-20313703 None:intergenic 45.0%
! TCTCTTGGAGAGTACATCTC+TGG + chr7_4:20313684-20313703 Msa1144380:CDS 45.0%
GAGAGTCTCCTCAAAGAGAA+TGG - chr7_4:20313712-20313731 None:intergenic 45.0%
CTCTACCAATCCACAACAGA+TGG + chr7_4:20313729-20313748 Msa1144380:CDS 45.0%
ACCAATCCACAACAGATGGA+AGG + chr7_4:20313733-20313752 Msa1144380:CDS 45.0%
TCCTTCCATCTGTTGTGGAT+TGG - chr7_4:20313737-20313756 None:intergenic 45.0%
TCATCATTGGAACCAGCAAG+GGG - chr7_4:20314017-20314036 None:intergenic 45.0%
CTCATCATTGGAACCAGCAA+GGG - chr7_4:20314018-20314037 None:intergenic 45.0%
ACTCATCATTGGAACCAGCA+AGG - chr7_4:20314019-20314038 None:intergenic 45.0%
CTGGTTCCAATGATGAGTCA+TGG + chr7_4:20314021-20314040 Msa1144380:CDS 45.0%
TTGGCACCATGACTCATCAT+TGG - chr7_4:20314030-20314049 None:intergenic 45.0%
! AATGATGAGTCATGGTGCCA+AGG + chr7_4:20314029-20314048 Msa1144380:CDS 45.0%
!! AAGGTGCTCGTTTTGCCAAA+TGG + chr7_4:20314093-20314112 Msa1144380:CDS 45.0%
CGACTTTAACCGCAACATCA+AGG + chr7_4:20314428-20314447 Msa1144380:intron 45.0%
GAACCAGAGATCTTGCTTGA+TGG + chr7_4:20314618-20314637 Msa1144380:CDS 45.0%
TCTCCATCAAGCAAGATCTC+TGG - chr7_4:20314624-20314643 None:intergenic 45.0%
TGAGGAGAATGCCCTCAAAT+TGG - chr7_4:20314725-20314744 None:intergenic 45.0%
GTATAGTCAGCAACTGTTGC+AGG - chr7_4:20314795-20314814 None:intergenic 45.0%
GTGTCACATACCATGATACC+AGG - chr7_4:20314855-20314874 None:intergenic 45.0%
! TTTGTCTGGTGGACAATCTG+AGG + chr7_4:20314997-20315016 Msa1144380:CDS 45.0%
!! GGTTCATGGCATTCAAGTTG+AGG - chr7_4:20315033-20315052 None:intergenic 45.0%
! TGGGTTTGGAGATTGGTTCA+TGG - chr7_4:20315047-20315066 None:intergenic 45.0%
TGAACCAATCTCCAAACCCA+TGG + chr7_4:20315047-20315066 Msa1144380:CDS 45.0%
!! AACACCGCTTTGAAGACATG+GGG + chr7_4:20315103-20315122 Msa1144380:CDS 45.0%
AGTTGGACTTAGCACGGAAA+AGG - chr7_4:20315168-20315187 None:intergenic 45.0%
! GCTCAACTTGGAAAGTACAC+TGG + chr7_4:20315193-20315212 Msa1144380:CDS 45.0%
! ACTTGGAAAGTACACTGGTG+AGG + chr7_4:20315198-20315217 Msa1144380:CDS 45.0%
! CTTGGAAAGTACACTGGTGA+GGG + chr7_4:20315199-20315218 Msa1144380:CDS 45.0%
TGAATCTGAGGAAGCCAAGA+AGG + chr7_4:20315222-20315241 Msa1144380:CDS 45.0%
GGACACAGAAGATTGACGGA+GGG - chr7_4:20312662-20312681 None:intergenic 50.0%
CAGCGGACACAGAAGATTGA+CGG - chr7_4:20312666-20312685 None:intergenic 50.0%
GGTCGGCCACTTAGTATACA+TGG - chr7_4:20312926-20312945 None:intergenic 50.0%
CTAAGTGGCCGACCACTTAA+TGG + chr7_4:20312932-20312951 Msa1144380:intron 50.0%
GCCGACCACTTAATGGGATA+AGG + chr7_4:20312939-20312958 Msa1144380:intron 50.0%
! GTCACCAGGTCGTGGTATTT+TGG + chr7_4:20313554-20313573 Msa1144380:CDS 50.0%
ATGGCCAAAATACCACGACC+TGG - chr7_4:20313561-20313580 None:intergenic 50.0%
!!! AGGTCGTGGTATTTTGGCCA+TGG + chr7_4:20313560-20313579 Msa1144380:CDS 50.0%
ACGCTTCCCACAAGTAGCAT+TGG - chr7_4:20313592-20313611 None:intergenic 50.0%
!! TGCTACTTGTGGGAAGCGTT+TGG + chr7_4:20313593-20313612 Msa1144380:CDS 50.0%
!! GGGAAGCGTTTGGCTTCAAT+TGG + chr7_4:20313603-20313622 Msa1144380:CDS 50.0%
CCATGCTTGGCGGTTAACTT+CGG - chr7_4:20313640-20313659 None:intergenic 50.0%
GAGATGGAACTGTCACCAGA+AGG - chr7_4:20313668-20313687 None:intergenic 50.0%
CTGGTGACAGTTCCATCTCT+TGG + chr7_4:20313669-20313688 Msa1144380:CDS 50.0%
!! CTCTGGTGCCATTCTCTTTG+AGG + chr7_4:20313701-20313720 Msa1144380:CDS 50.0%
! TCATGGTGCCAAGGTCTAGA+CGG + chr7_4:20314038-20314057 Msa1144380:CDS 50.0%
GTAGTATGCAGCTGAACGAG+AGG - chr7_4:20314069-20314088 None:intergenic 50.0%
TCAGCTGCATACTACCAGCA+AGG + chr7_4:20314074-20314093 Msa1144380:CDS 50.0%
GTGTCTATTTGATCCCCCTG+TGG + chr7_4:20314119-20314138 Msa1144380:intron 50.0%
ACTGTTGTGAGCATCCCCAA+TGG + chr7_4:20314247-20314266 Msa1144380:CDS 50.0%
TCCTTGACTGCAAGAGCAGA+GGG - chr7_4:20314274-20314293 None:intergenic 50.0%
TTCCTTGACTGCAAGAGCAG+AGG - chr7_4:20314275-20314294 None:intergenic 50.0%
TCGCTACGCTGCAATTAGTC+AGG + chr7_4:20314312-20314331 Msa1144380:CDS 50.0%
!! CAACGGATTGGTCCCAATTG+TGG + chr7_4:20314596-20314615 Msa1144380:CDS 50.0%
AGCACAAAAGGTTTGGGCTG+AGG + chr7_4:20314671-20314690 Msa1144380:CDS 50.0%
CATTCTCCTCAAGCCTAGCA+TGG + chr7_4:20314734-20314753 Msa1144380:CDS 50.0%
ATACCCTCAAGCTCCTTCAC+AGG + chr7_4:20314811-20314830 Msa1144380:CDS 50.0%
TCTCCTGTGAAGGAGCTTGA+GGG - chr7_4:20314817-20314836 None:intergenic 50.0%
TTCTCCTGTGAAGGAGCTTG+AGG - chr7_4:20314818-20314837 None:intergenic 50.0%
ATGAGAACGACACGTGCCAT+GGG - chr7_4:20315066-20315085 None:intergenic 50.0%
TATGAGAACGACACGTGCCA+TGG - chr7_4:20315067-20315086 None:intergenic 50.0%
CTGCCTGAACGTTCTCTATG+CGG - chr7_4:20315132-20315151 None:intergenic 50.0%
CGGACACAGAAGATTGACGG+AGG - chr7_4:20312663-20312682 None:intergenic 55.0%
AGTGAGACTTGATGGAGCGG+CGG - chr7_4:20312701-20312720 None:intergenic 55.0%
CGCGGTCTTAACGAGCTCAT+CGG - chr7_4:20312743-20312762 None:intergenic 55.0%
CGATGAGCTCGTTAAGACCG+CGG + chr7_4:20312741-20312760 Msa1144380:CDS 55.0%
ACAATTGCGTCACCAGGTCG+TGG + chr7_4:20313546-20313565 Msa1144380:CDS 55.0%
CCGAAGTTAACCGCCAAGCA+TGG + chr7_4:20313637-20313656 Msa1144380:CDS 55.0%
AGGCAAGACCGTCTAGACCT+TGG - chr7_4:20314049-20314068 None:intergenic 55.0%
TGGCAAAACGAGCACCTTGC+TGG - chr7_4:20314091-20314110 None:intergenic 55.0%
CAAGAGCAGAGGGACCATTG+GGG - chr7_4:20314264-20314283 None:intergenic 55.0%
GCAAGAGCAGAGGGACCATT+GGG - chr7_4:20314265-20314284 None:intergenic 55.0%
TGCAAGAGCAGAGGGACCAT+TGG - chr7_4:20314266-20314285 None:intergenic 55.0%
TCCCTCTGCTCTTGCAGTCA+AGG + chr7_4:20314270-20314289 Msa1144380:CDS 55.0%
TTGCAGTCAAGGAAGCAGCC+TGG + chr7_4:20314281-20314300 Msa1144380:CDS 55.0%
TGCAGTCAAGGAAGCAGCCT+GGG + chr7_4:20314282-20314301 Msa1144380:CDS 55.0%
GGGTAACCATGCTAGGCTTG+AGG - chr7_4:20314743-20314762 None:intergenic 55.0%
AAGCCTAGCATGGTTACCCC+AGG + chr7_4:20314744-20314763 Msa1144380:CDS 55.0%
TGTCCTTGCACTCAGCTCCT+GGG - chr7_4:20314764-20314783 None:intergenic 55.0%
TTGTCCTTGCACTCAGCTCC+TGG - chr7_4:20314765-20314784 None:intergenic 55.0%
AGGAGCTGAGTGCAAGGACA+AGG + chr7_4:20314764-20314783 Msa1144380:CDS 55.0%
GTCAGCAACTGTTGCAGGAG+AGG - chr7_4:20314790-20314809 None:intergenic 55.0%
CTGGGGGAATTCTCCTGTGA+AGG - chr7_4:20314827-20314846 None:intergenic 55.0%
ATGATACCAGGGACAGCTGG+GGG - chr7_4:20314843-20314862 None:intergenic 55.0%
CATGATACCAGGGACAGCTG+GGG - chr7_4:20314844-20314863 None:intergenic 55.0%
CCATGATACCAGGGACAGCT+GGG - chr7_4:20314845-20314864 None:intergenic 55.0%
ACCATGATACCAGGGACAGC+TGG - chr7_4:20314846-20314865 None:intergenic 55.0%
CGTGCCATGGGTTTGGAGAT+TGG - chr7_4:20315054-20315073 None:intergenic 55.0%
AACGACACGTGCCATGGGTT+TGG - chr7_4:20315061-20315080 None:intergenic 55.0%
!! ACCGCTTTGAAGACATGGGG+AGG + chr7_4:20315106-20315125 Msa1144380:CDS 55.0%
GCCTCCCCATGTCTTCAAAG+CGG - chr7_4:20315110-20315129 None:intergenic 55.0%
AGGCCGCATAGAGAACGTTC+AGG + chr7_4:20315126-20315145 Msa1144380:CDS 55.0%
CACTGGTGAGGGTGAATCTG+AGG + chr7_4:20315210-20315229 Msa1144380:CDS 55.0%
TGAGACTTGATGGAGCGGCG+GGG - chr7_4:20312699-20312718 None:intergenic 60.0%
GTGAGACTTGATGGAGCGGC+GGG - chr7_4:20312700-20312719 None:intergenic 60.0%
! GAAGGGTACGCCATGCTTGG+CGG - chr7_4:20313650-20313669 None:intergenic 60.0%
! CCAGAAGGGTACGCCATGCT+TGG - chr7_4:20313653-20313672 None:intergenic 60.0%
CCAAGCATGGCGTACCCTTC+TGG + chr7_4:20313650-20313669 Msa1144380:CDS 60.0%
!! TAGGGTTTGGTGCCCCTTGC+TGG + chr7_4:20314002-20314021 Msa1144380:intron 60.0%
GCAGTCAAGGAAGCAGCCTG+GGG + chr7_4:20314283-20314302 Msa1144380:CDS 60.0%
GCTCCTGGGGTAACCATGCT+AGG - chr7_4:20314750-20314769 None:intergenic 60.0%
TACCCCAGGAGCTGAGTGCA+AGG + chr7_4:20314758-20314777 Msa1144380:CDS 60.0%
GTCCTTGCACTCAGCTCCTG+GGG - chr7_4:20314763-20314782 None:intergenic 60.0%
AGAATTCCCCCAGCTGTCCC+TGG + chr7_4:20314834-20314853 Msa1144380:CDS 60.0%
CCCAGCTGTCCCTGGTATCA+TGG + chr7_4:20314842-20314861 Msa1144380:CDS 60.0%
CAAGGAAGCAGCCTGGGGTC+TGG + chr7_4:20314288-20314307 Msa1144380:CDS 65.0%
GGCGGGGCTGCATCGTACAG+CGG - chr7_4:20312683-20312702 None:intergenic 70.0%
AGCGTAGCGAGCCAGACCCC+AGG - chr7_4:20314302-20314321 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 20312308 20315560 20312308 ID=Msa1144380;Name=Msa1144380
chr7_4 mRNA 20312308 20315560 20312308 ID=Msa1144380-mRNA-1;Parent=Msa1144380;Name=Msa1144380-mRNA-1;_AED=0.09;_eAED=0.09;_QI=278|1|1|1|1|1|6|287|398
chr7_4 exon 20312308 20312762 20312308 ID=Msa1144380-mRNA-1:exon:4864;Parent=Msa1144380-mRNA-1
chr7_4 exon 20313543 20313812 20313543 ID=Msa1144380-mRNA-1:exon:4865;Parent=Msa1144380-mRNA-1
chr7_4 exon 20314005 20314114 20314005 ID=Msa1144380-mRNA-1:exon:4866;Parent=Msa1144380-mRNA-1
chr7_4 exon 20314243 20314333 20314243 ID=Msa1144380-mRNA-1:exon:4867;Parent=Msa1144380-mRNA-1
chr7_4 exon 20314594 20314863 20314594 ID=Msa1144380-mRNA-1:exon:4868;Parent=Msa1144380-mRNA-1
chr7_4 exon 20314995 20315560 20314995 ID=Msa1144380-mRNA-1:exon:4869;Parent=Msa1144380-mRNA-1
chr7_4 five_prime_UTR 20312308 20312585 20312308 ID=Msa1144380-mRNA-1:five_prime_utr;Parent=Msa1144380-mRNA-1
chr7_4 CDS 20312586 20312762 20312586 ID=Msa1144380-mRNA-1:cds;Parent=Msa1144380-mRNA-1
chr7_4 CDS 20313543 20313812 20313543 ID=Msa1144380-mRNA-1:cds;Parent=Msa1144380-mRNA-1
chr7_4 CDS 20314005 20314114 20314005 ID=Msa1144380-mRNA-1:cds;Parent=Msa1144380-mRNA-1
chr7_4 CDS 20314243 20314333 20314243 ID=Msa1144380-mRNA-1:cds;Parent=Msa1144380-mRNA-1
chr7_4 CDS 20314594 20314863 20314594 ID=Msa1144380-mRNA-1:cds;Parent=Msa1144380-mRNA-1
chr7_4 CDS 20314995 20315273 20314995 ID=Msa1144380-mRNA-1:cds;Parent=Msa1144380-mRNA-1
chr7_4 three_prime_UTR 20315274 20315560 20315274 ID=Msa1144380-mRNA-1:three_prime_utr;Parent=Msa1144380-mRNA-1
Gene Sequence

>Msa1144380

ATGGCCTCTGCATCAGCATCTCTTTTCAAGTCGTCGATTGTTCTTGACAAGTCTGAATGGGTGAAGGGACAGACCCTCCGTCAATCTTCTGTGTCCGCTGTACGATGCAGCCCCGCCGCTCCATCAAGTCTCACTATCAGAGCTGGTTCTTATGCCGATGAGCTCGTTAAGACCGCGAAAACAATTGCGTCACCAGGTCGTGGTATTTTGGCCATGGATGAGTCCAATGCTACTTGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAACACCGAAGTTAACCGCCAAGCATGGCGTACCCTTCTGGTGACAGTTCCATCTCTTGGAGAGTACATCTCTGGTGCCATTCTCTTTGAGGAGACTCTCTACCAATCCACAACAGATGGAAGGAAGATTGTCGATGTACTTATTGAGCAAAACATTGTTCCTGGTATCAAAGTTGACAAGGGTTTGGTGCCCCTTGCTGGTTCCAATGATGAGTCATGGTGCCAAGGTCTAGACGGTCTTGCCTCTCGTTCAGCTGCATACTACCAGCAAGGTGCTCGTTTTGCCAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTTGCAGTCAAGGAAGCAGCCTGGGGTCTGGCTCGCTACGCTGCAATTAGTCAGGACAACGGATTGGTCCCAATTGTGGAACCAGAGATCTTGCTTGATGGAGAACATGGTATTGACAGAACTTTTGAAGTAGCACAAAAGGTTTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCAATTTGAGGGCATTCTCCTCAAGCCTAGCATGGTTACCCCAGGAGCTGAGTGCAAGGACAAGGCCTCTCCTGCAACAGTTGCTGACTATACCCTCAAGCTCCTTCACAGGAGAATTCCCCCAGCTGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAATGCCATGAACCAATCTCCAAACCCATGGCACGTGTCGTTCTCATATGCAAGAGCTCTCCAAAACACCGCTTTGAAGACATGGGGAGGCCGCATAGAGAACGTTCAGGCAGCACAAGAAGCACTCCTTTTCCGTGCTAAGTCCAACTCAATTGCTCAACTTGGAAAGTACACTGGTGAGGGTGAATCTGAGGAAGCCAAGAAGGAATTGTTTGTCAAAGGATACTCTTATTAA

Protein sequence

>Msa1144380

MASASASLFKSSIVLDKSEWVKGQTLRQSSVSAVRCSPAAPSSLTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPSLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFFYLAENNVQFEGILLKPSMVTPGAECKDKASPATVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRIENVQAAQEALLFRAKSNSIAQLGKYTGEGESEEAKKELFVKGYSY*