AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1020490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1020490 MtrunA17_Chr7g0220721 94.541 403 14 3 1 402 1 396 0.0 785
Msa1020490 MtrunA17_Chr4g0072871 40.541 407 163 12 24 402 20 375 1.28e-80 252
Msa1020490 MtrunA17_Chr1g0150471 38.520 392 147 15 24 401 4 315 3.04e-73 231
Msa1020490 MtrunA17_Chr3g0136701 39.487 390 122 12 23 401 3 289 6.95e-69 219
Msa1020490 MtrunA17_Chr4g0033641 43.478 92 43 1 26 108 5 96 1.47e-18 84.3
Msa1020490 MtrunA17_Chr4g0033641 39.474 76 40 1 69 138 5 80 3.00e-11 63.2
Msa1020490 MtrunA17_Chr1g0155811 41.935 93 44 1 26 108 5 97 5.53e-18 83.6
Msa1020490 MtrunA17_Chr5g0405151 48.750 80 33 1 26 97 5 84 7.84e-18 80.9
Msa1020490 MtrunA17_Chr5g0429341 42.857 91 52 0 26 116 5 95 2.43e-17 83.2
Msa1020490 MtrunA17_Chr2g0314671 43.011 93 44 1 26 109 5 97 2.71e-17 81.6
Msa1020490 MtrunA17_Chr7g0268691 35.088 114 66 3 23 132 17 126 4.35e-17 82.0
Msa1020490 MtrunA17_Chr2g0329511 40.217 92 46 1 26 108 5 96 1.53e-16 78.6
Msa1020490 MtrunA17_Chr2g0329511 50.000 50 25 0 69 118 5 54 6.05e-11 62.4
Msa1020490 MtrunA17_Chr3g0142221 33.333 111 63 1 26 125 5 115 2.62e-15 74.7
Msa1020490 MtrunA17_Chr4g0035651 38.710 93 47 1 26 108 5 97 1.43e-14 72.4
Msa1020490 MtrunA17_Chr3g0120711 41.758 91 52 1 26 116 5 94 2.09e-14 74.3
Msa1020490 MtrunA17_Chr3g0145061 35.417 96 52 1 26 111 5 100 1.45e-13 69.7
Msa1020490 MtrunA17_Chr1g0209071 37.838 74 46 0 24 97 3 76 1.05e-11 65.9
Msa1020490 MtrunA17_Chr2g0322951 64.444 45 16 0 330 374 89 133 1.33e-11 62.4
Msa1020490 MtrunA17_Chr8g0390971 68.182 44 14 0 333 376 358 401 1.59e-11 65.5
Msa1020490 MtrunA17_Chr7g0251781 68.293 41 13 0 337 377 345 385 3.74e-11 64.3
Msa1020490 MtrunA17_Chr2g0322941 35.165 91 59 0 16 106 34 124 5.01e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1020490 AT3G02380.1 54.250 400 106 11 19 402 9 347 5.23e-129 375
Msa1020490 AT5G15840.1 52.020 396 135 13 23 402 17 373 8.83e-117 345
Msa1020490 AT5G15850.1 51.980 404 127 10 16 402 2 355 4.30e-115 340
Msa1020490 AT5G57660.1 42.967 391 158 13 23 402 19 355 3.86e-76 240
Msa1020490 AT5G24930.1 39.303 402 180 11 23 402 3 362 1.19e-72 231
Msa1020490 AT2G24790.1 39.889 361 125 12 20 377 2 273 5.05e-71 225
Msa1020490 AT5G15840.2 47.482 278 100 9 23 291 17 257 5.41e-63 204
Msa1020490 AT2G24790.2 42.857 182 78 5 20 198 2 160 7.16e-41 144
Msa1020490 AT5G48250.1 28.912 377 216 16 26 374 5 357 1.94e-24 103
Msa1020490 AT1G78600.1 44.565 92 42 1 26 108 5 96 2.04e-18 85.5
Msa1020490 AT1G78600.2 44.565 92 42 1 26 108 5 96 2.13e-18 85.9
Msa1020490 AT1G06040.1 43.478 92 43 1 26 108 5 96 2.86e-17 81.3
Msa1020490 AT2G21320.1 47.500 80 34 1 26 97 5 84 5.45e-17 78.6
Msa1020490 AT2G47890.3 38.710 93 55 1 24 116 11 101 6.92e-17 81.3
Msa1020490 AT1G06040.2 43.478 92 43 1 26 108 5 96 9.47e-17 78.2
Msa1020490 AT2G47890.1 38.710 93 55 1 24 116 11 101 1.09e-16 80.9
Msa1020490 AT2G47890.1 51.852 54 26 0 324 377 278 331 8.22e-11 63.2
Msa1020490 AT2G47890.2 38.710 93 55 1 24 116 11 101 1.27e-16 79.3
Msa1020490 AT4G38960.1 45.000 80 36 1 26 97 5 84 1.55e-16 77.8
Msa1020490 AT4G38960.6 45.000 80 36 1 26 97 5 84 1.55e-16 77.8
Msa1020490 AT2G33500.2 34.127 126 75 2 25 150 11 128 4.93e-16 79.7
Msa1020490 AT2G33500.2 63.043 46 17 0 332 377 355 400 1.14e-11 66.2
Msa1020490 AT2G33500.1 34.127 126 75 2 25 150 11 128 4.96e-16 79.7
Msa1020490 AT2G33500.1 63.043 46 17 0 332 377 356 401 1.15e-11 66.2
Msa1020490 AT2G31380.1 40.217 92 46 1 26 108 5 96 7.88e-16 77.0
Msa1020490 AT1G75540.1 37.895 95 47 1 26 108 5 99 1.20e-15 77.8
Msa1020490 AT1G28050.1 35.922 103 63 1 26 128 9 108 1.62e-14 75.1
Msa1020490 AT1G68520.1 36.290 124 73 3 258 378 282 402 4.29e-13 70.9
Msa1020490 AT3G07650.3 43.056 72 41 0 26 97 5 76 1.07e-12 69.3
Msa1020490 AT3G07650.2 43.056 72 41 0 26 97 5 76 1.07e-12 69.3
Msa1020490 AT3G07650.4 43.056 72 41 0 26 97 5 76 1.07e-12 69.3
Msa1020490 AT3G07650.1 43.056 72 41 0 26 97 5 76 1.07e-12 69.3
Msa1020490 AT1G68190.2 34.000 100 61 2 24 123 41 135 1.08e-12 69.3
Msa1020490 AT1G68190.1 34.000 100 61 2 24 123 12 106 1.39e-12 68.9
Msa1020490 AT1G68190.3 34.000 100 61 2 24 123 12 106 1.39e-12 68.9
Msa1020490 AT1G73870.1 65.957 47 16 0 332 378 344 390 2.20e-12 68.6
Msa1020490 AT4G15250.1 35.714 84 54 0 26 109 5 88 2.70e-12 67.8
Msa1020490 AT1G25440.1 37.037 135 66 3 251 375 278 403 3.11e-12 68.2
Msa1020490 AT4G10240.1 34.694 98 45 2 26 108 5 98 6.37e-12 63.9
Msa1020490 AT3G21880.1 35.165 91 57 1 26 116 5 93 1.74e-11 65.5
Msa1020490 AT3G21880.3 35.165 91 57 1 26 116 9 97 1.95e-11 65.5
Msa1020490 AT3G21880.2 35.165 91 57 1 26 116 9 97 1.95e-11 65.5
Msa1020490 AT5G14370.1 47.619 63 33 0 315 377 276 338 3.88e-11 64.3
Msa1020490 AT4G39070.1 36.559 93 49 1 26 108 5 97 4.61e-11 63.2

Find 122 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGGTTTGTTTGTCAATTT+TGG 0.123201 7_1:-43913764 None:intergenic
GTCCCGATTCTTCCAATTTC+GGG 0.189546 7_1:+43914132 Msa1020490:CDS
TTGATGAAATTACAGTAATT+TGG 0.205735 7_1:-43916782 None:intergenic
CTCATCATGATGAGTATTAT+TGG 0.214592 7_1:-43914478 None:intergenic
TGAAATGATGTTACACAAAA+TGG 0.215020 7_1:+43916663 Msa1020490:exon
CTTCATCTTCGGCACCTAAA+AGG 0.221370 7_1:-43914179 None:intergenic
AATAGGTCAATTGTTCCTTT+TGG 0.247439 7_1:-43916384 None:intergenic
TGTCCCGATTCTTCCAATTT+CGG 0.284602 7_1:+43914131 Msa1020490:CDS
GAATAGGTCATGGTTGATTC+TGG 0.297791 7_1:-43916354 None:intergenic
GAAACTCGGCCGCGTATAAA+AGG 0.298232 7_1:+43916543 Msa1020490:CDS
ATATATTGACACAATATAAA+AGG 0.303540 7_1:+43917104 Msa1020490:three_prime_UTR
CCACGTTGCCGCAGACCTTA+TGG 0.314996 7_1:-43913851 None:intergenic
TTGTTATTGATGTTCTTTAG+AGG 0.325161 7_1:-43914315 None:intergenic
TAAGTGCATGTTTGAATTGA+TGG 0.328168 7_1:+43916695 Msa1020490:three_prime_UTR
CTAATTACAGATGTTGGATA+TGG 0.334569 7_1:+43916624 Msa1020490:CDS
CCAATTTCGGGTTACCTATA+CGG 0.340122 7_1:+43914144 Msa1020490:CDS
ATGAAAATGAAGCTGCTTCA+TGG 0.340820 7_1:+43914280 Msa1020490:CDS
CTCTATCCATTGGAGAGAAA+TGG 0.342666 7_1:-43916434 None:intergenic
GAAAATTTGAGAAAACAATT+AGG 0.345101 7_1:+43916496 Msa1020490:CDS
TGGTAATAGTAAAAGATAAA+TGG 0.346877 7_1:-43916871 None:intergenic
GGCTTTGTCGGCGGTGGTTG+TGG 0.350451 7_1:+43914201 Msa1020490:CDS
CATAATCAAGAGGGTAATAA+TGG 0.353323 7_1:+43914372 Msa1020490:CDS
TGTAACATCATTTCAGAAAG+AGG 0.365033 7_1:-43916655 None:intergenic
CCGTATAGGTAACCCGAAAT+TGG 0.367447 7_1:-43914144 None:intergenic
CTCTCTGTACCTTAGGACTT+TGG 0.375434 7_1:-43916460 None:intergenic
TGGGAAGACATTTGAATAGA+AGG 0.383605 7_1:-43916414 None:intergenic
GACACAATATAAAAGGATAA+TGG 0.398986 7_1:+43917111 Msa1020490:three_prime_UTR
CAACAACAAGAAGATCATTA+TGG 0.399289 7_1:+43914513 Msa1020490:CDS
GTCGGCGGTGGTTGTGGTGG+TGG 0.399578 7_1:+43914207 Msa1020490:CDS
GAATAGAAGGACCTGAAAAT+AGG 0.406008 7_1:-43916401 None:intergenic
TGGTTGTGAGGTGGAGGAAG+AGG 0.415419 7_1:+43914227 Msa1020490:CDS
TGGTGGTGGTTGTGAGGTGG+AGG 0.415856 7_1:+43914221 Msa1020490:CDS
TCAGGTTTCAGTTTCATCAA+TGG 0.420772 7_1:+43916317 Msa1020490:intron
TAACCCGAAATTGGAAGAAT+CGG 0.422897 7_1:-43914135 None:intergenic
ATTACTGTAATTTCATCAAA+CGG 0.424024 7_1:+43916786 Msa1020490:three_prime_UTR
GAGTTTGAGTCTTCCAAAGC+TGG 0.426808 7_1:+43914615 Msa1020490:CDS
GGTGGCTGTGGCTGAGGTGG+TGG 0.428121 7_1:-43913830 None:intergenic
GAAGAATCGGGACACGTTGA+TGG 0.431550 7_1:-43914122 None:intergenic
CAAACATGCACTTAGTTCTC+TGG 0.436340 7_1:-43916686 None:intergenic
CCTTATGGTGGCTGTGGCTG+AGG 0.436720 7_1:-43913836 None:intergenic
TATCCATGAGTGTATTACTT+TGG 0.436981 7_1:+43917156 Msa1020490:three_prime_UTR
AAATCTTGCTCCAACATTTG+TGG 0.438282 7_1:-43913802 None:intergenic
ATTGTAACTGAATCCAGCTT+TGG 0.441148 7_1:-43914628 None:intergenic
TGTACCTGCTGTTGTTGAAC+AGG 0.442029 7_1:-43914573 None:intergenic
TGAAGGTGTTGATCATGATA+TGG 0.443702 7_1:+43914254 Msa1020490:CDS
GATGAAGGCTTTGTCGGCGG+TGG 0.445280 7_1:+43914195 Msa1020490:CDS
TCTATCCATTGGAGAGAAAT+GGG 0.447374 7_1:-43916433 None:intergenic
GTCTTCCCATTTCTCTCCAA+TGG 0.450964 7_1:+43916428 Msa1020490:CDS
TTCATCTTCGGCACCTAAAA+GGG 0.458034 7_1:-43914178 None:intergenic
GCCGACAAAGCCTTCATCTT+CGG 0.465052 7_1:-43914190 None:intergenic
TTACTGTAATTTCATCAAAC+GGG 0.465161 7_1:+43916787 Msa1020490:three_prime_UTR
TGAGGCCTGCGAGCGTGCCC+CGG 0.465827 7_1:+43914014 Msa1020490:CDS
TTGTGGTGGTGGTTGTGAGG+TGG 0.465870 7_1:+43914218 Msa1020490:CDS
ACTTTGGCTTCTCTATCCAT+TGG 0.469238 7_1:-43916444 None:intergenic
TGGAGAAGTTGATGAGTACT+TGG 0.471287 7_1:+43914407 Msa1020490:CDS
TGCTCCAACATTTGTGGAGA+GGG 0.475498 7_1:-43913796 None:intergenic
GCCGAAGATGAAGGCTTTGT+CGG 0.477058 7_1:+43914189 Msa1020490:CDS
GTGGAGGAAGAGGAGGATGA+AGG 0.479258 7_1:+43914237 Msa1020490:CDS
TGGAGCTCTTGAATAGGTCA+TGG 0.480322 7_1:-43916364 None:intergenic
TCAGTTTCATCAATGGATGT+TGG 0.481745 7_1:+43916324 Msa1020490:CDS
AGTGTTAAGGAAGTTCAAAT+AGG 0.491879 7_1:-43913735 None:intergenic
ACATCACTAATTACAGATGT+TGG 0.495016 7_1:+43916618 Msa1020490:CDS
CGCAGACCTTATGGTGGCTG+TGG 0.501654 7_1:-43913842 None:intergenic
AAACAATTAGGTATGCTTCA+AGG 0.513566 7_1:+43916508 Msa1020490:CDS
CCTCAGCCACAGCCACCATA+AGG 0.513892 7_1:+43913836 Msa1020490:CDS
AAAATACAAAAGCTATATGA+AGG 0.518299 7_1:-43917134 None:intergenic
AACCCGAAATTGGAAGAATC+GGG 0.527364 7_1:-43914134 None:intergenic
TGGTTGTGGTGGTGGTTGTG+AGG 0.528945 7_1:+43914215 Msa1020490:CDS
GGGTGGCCGGAGGACCGTAT+AGG 0.530363 7_1:-43914158 None:intergenic
CTTTACAAAGAAAAGCCGCC+GGG 0.532716 7_1:-43914032 None:intergenic
ACCTATTCAAGAGCTCCAAA+AGG 0.534176 7_1:+43916369 Msa1020490:CDS
TATGGTGGCTGTGGCTGAGG+TGG 0.539082 7_1:-43913833 None:intergenic
TTTGTCGGCGGTGGTTGTGG+TGG 0.539334 7_1:+43914204 Msa1020490:CDS
CTGTGGCTGAGGTGGTGGTG+AGG 0.545540 7_1:-43913825 None:intergenic
AACATCTGTAATTAGTGATG+TGG 0.546490 7_1:-43916616 None:intergenic
GCGCGGCAGAAAACCGCGCA+TGG 0.548669 7_1:-43913904 None:intergenic
CGTTGATGGCGGCTTGCAAG+AGG 0.550196 7_1:-43914108 None:intergenic
TCAAATATACACTAAGGAGA+AGG 0.556269 7_1:+43916818 Msa1020490:three_prime_UTR
GTAACATCATTTCAGAAAGA+GGG 0.558362 7_1:-43916654 None:intergenic
TTAGTGTATATTTGAAAGCA+CGG 0.559419 7_1:-43916810 None:intergenic
CTTGTTGATTGCAATTCTTG+TGG 0.560089 7_1:+43914432 Msa1020490:CDS
TTGTGAGGTGGAGGAAGAGG+AGG 0.565784 7_1:+43914230 Msa1020490:CDS
GTTGATTGCAATTCTTGTGG+TGG 0.567048 7_1:+43914435 Msa1020490:CDS
CTCCAACATTTGTGGAGAGG+GGG 0.567790 7_1:-43913794 None:intergenic
TCACCAAAGTAATACACTCA+TGG 0.568692 7_1:-43917159 None:intergenic
CATAAGGTCTGCGGCAACGT+GGG 0.569294 7_1:+43913852 Msa1020490:CDS
TGTTCCTGTTCAACAACAGC+AGG 0.577069 7_1:+43914569 Msa1020490:CDS
AGCATGTGACACGTGCCGCT+CGG 0.577146 7_1:+43913879 Msa1020490:CDS
GTGCTTTCAAATATACACTA+AGG 0.578909 7_1:+43916812 Msa1020490:three_prime_UTR
GTTCGTGCCTCGAGGCTACA+CGG 0.579119 7_1:-43913978 None:intergenic
GCGGCAGAAAACCGCGCATG+GGG 0.588981 7_1:-43913902 None:intergenic
GCTTTACAAAGAAAAGCCGC+CGG 0.590036 7_1:-43914033 None:intergenic
GGGTTACCTATACGGTCCTC+CGG 0.593643 7_1:+43914152 Msa1020490:CDS
ATAGAGAAGCCAAAGTCCTA+AGG 0.594326 7_1:+43916451 Msa1020490:CDS
AATAACAACAACATTAGCAA+TGG 0.607541 7_1:+43914348 Msa1020490:CDS
AAACCGCGCATGGGGCCGAG+CGG 0.610346 7_1:-43913894 None:intergenic
GCTCCAACATTTGTGGAGAG+GGG 0.610704 7_1:-43913795 None:intergenic
TTGCTCCAACATTTGTGGAG+AGG 0.611435 7_1:-43913797 None:intergenic
TAGCAATGGTCATAATCAAG+AGG 0.613653 7_1:+43914362 Msa1020490:CDS
ACGCGGCCGAGTTTCAGCAT+AGG 0.616320 7_1:-43916535 None:intergenic
CCATAAGGTCTGCGGCAACG+TGG 0.618452 7_1:+43913851 Msa1020490:CDS
GGAAAGCCTATGCTGAAACT+CGG 0.623923 7_1:+43916529 Msa1020490:CDS
AAAGCTGGATTCAGTTACAA+TGG 0.625769 7_1:+43914630 Msa1020490:CDS
AGCAATGGTCATAATCAAGA+GGG 0.627143 7_1:+43914363 Msa1020490:CDS
CACAGCCACCATAAGGTCTG+CGG 0.627512 7_1:+43913843 Msa1020490:CDS
GTTGATGGCGGCTTGCAAGA+GGG 0.631032 7_1:-43914107 None:intergenic
GTGGATATCAGCATCACAAG+TGG 0.632088 7_1:-43914076 None:intergenic
AGGCTACACGGTTTGCCGCG+TGG 0.644154 7_1:-43913966 None:intergenic
ATCTTCGGCACCTAAAAGGG+TGG 0.644787 7_1:-43914175 None:intergenic
GTGGATGCGTGCATCACACG+CGG 0.646833 7_1:-43913947 None:intergenic
TTGCAAGAGGGTTAGCAGAG+TGG 0.655218 7_1:-43914095 None:intergenic
GAAGATGAAGGCTTTGTCGG+CGG 0.655301 7_1:+43914192 Msa1020490:CDS
CACAAGAATTGCAATCAACA+AGG 0.655647 7_1:-43914431 None:intergenic
GCTGGATTCAGTTACAATGG+TGG 0.656212 7_1:+43914633 Msa1020490:CDS
GAATCGGGACACGTTGATGG+CGG 0.662257 7_1:-43914119 None:intergenic
ACAGTATTAGTAGAAAGACT+TGG 0.669242 7_1:-43916891 None:intergenic
CGTTGCCGCAGACCTTATGG+TGG 0.670034 7_1:-43913848 None:intergenic
GTGTGATGCACGCATCCACG+CGG 0.684344 7_1:+43913951 Msa1020490:CDS
CGGCAAACCGTGTAGCCTCG+AGG 0.686538 7_1:+43913971 Msa1020490:CDS
ATAAATATGCCGAATCTGCG+CGG 0.687353 7_1:-43913921 None:intergenic
TTTACAAAGAAAAGCCGCCG+GGG 0.712447 7_1:-43914031 None:intergenic
CCAGACGCGTTCGTGCCTCG+AGG 0.721870 7_1:-43913986 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTGAAATATTTATCTTTA+AGG + chr7_1:43915777-43915796 Msa1020490:intron 10.0%
!! ATTGAAATATTTATCTTTAA+GGG + chr7_1:43915778-43915797 Msa1020490:intron 10.0%
!!! TTTTTTTTTAATTGAAAATC+AGG + chr7_1:43916299-43916318 Msa1020490:intron 10.0%
!! TTACTTAAAAGTGAAAATAA+TGG + chr7_1:43914879-43914898 Msa1020490:intron 15.0%
!! TTAAAATTCATAAAGTTTGA+GGG - chr7_1:43915043-43915062 None:intergenic 15.0%
!!! TTTTATGAAATTGTTGAAAA+TGG - chr7_1:43915288-43915307 None:intergenic 15.0%
!!! TGATTTTCTCAAATTATTAA+CGG + chr7_1:43915446-43915465 Msa1020490:intron 15.0%
!! ATATTAGTGATAAAAAAAGT+AGG - chr7_1:43916270-43916289 None:intergenic 15.0%
!! ATATATTGACACAATATAAA+AGG + chr7_1:43917104-43917123 Msa1020490:three_prime_UTR 15.0%
!!! AATAATGGATTTTTGTTTAG+TGG + chr7_1:43914387-43914406 Msa1020490:CDS 20.0%
!! GTTAAAATTCATAAAGTTTG+AGG - chr7_1:43915044-43915063 None:intergenic 20.0%
!! AAATACCTATTTGTAAACTA+AGG - chr7_1:43915103-43915122 None:intergenic 20.0%
!!! AGAAAAAGTGTAAAGAAAAA+GGG - chr7_1:43915521-43915540 None:intergenic 20.0%
!!! AAGAAAAAGTGTAAAGAAAA+AGG - chr7_1:43915522-43915541 None:intergenic 20.0%
!!! TATTCTAGAAAATTGATACT+TGG - chr7_1:43915655-43915674 None:intergenic 20.0%
!! GAAAATTTGAGAAAACAATT+AGG + chr7_1:43916496-43916515 Msa1020490:CDS 20.0%
!! TTGATGAAATTACAGTAATT+TGG - chr7_1:43916785-43916804 None:intergenic 20.0%
!! ATTACTGTAATTTCATCAAA+CGG + chr7_1:43916786-43916805 Msa1020490:three_prime_UTR 20.0%
!! TGGTAATAGTAAAAGATAAA+TGG - chr7_1:43916874-43916893 None:intergenic 20.0%
!!! ATTTTTCTCAATTTGTATTG+TGG + chr7_1:43917062-43917081 Msa1020490:three_prime_UTR 20.0%
!! AAAATACAAAAGCTATATGA+AGG - chr7_1:43917137-43917156 None:intergenic 20.0%
!!! AATGGTTTGTTTGTCAATTT+TGG - chr7_1:43913767-43913786 None:intergenic 25.0%
!! TTGTTATTGATGTTCTTTAG+AGG - chr7_1:43914318-43914337 None:intergenic 25.0%
! AATAACAACAACATTAGCAA+TGG + chr7_1:43914348-43914367 Msa1020490:CDS 25.0%
!!! TTGTTTTGTTTGCAATTGTT+TGG + chr7_1:43914737-43914756 Msa1020490:intron 25.0%
!! GGACAAATTTTAAATCTTGT+CGG - chr7_1:43914922-43914941 None:intergenic 25.0%
! TATTTGTAAACTAAGGTTCT+GGG - chr7_1:43915096-43915115 None:intergenic 25.0%
! TTTGAATTTGATATGCTTTG+TGG + chr7_1:43915143-43915162 Msa1020490:intron 25.0%
! TTCAGTGTAATTATATGTGT+CGG - chr7_1:43915421-43915440 None:intergenic 25.0%
! AAAAAGGGTAAAGAGTTATA+CGG - chr7_1:43915506-43915525 None:intergenic 25.0%
!!! TCTTTACACTTTTTCTTTAG+TGG + chr7_1:43915525-43915544 Msa1020490:intron 25.0%
!! AATCTACAGAAGTCAATTTT+GGG - chr7_1:43915842-43915861 None:intergenic 25.0%
! TCAGGTCTAATATTGTAAAT+TGG + chr7_1:43915925-43915944 Msa1020490:intron 25.0%
! AAAAAAGTAGGAGATATCAA+AGG - chr7_1:43916258-43916277 None:intergenic 25.0%
! TGAAATGATGTTACACAAAA+TGG + chr7_1:43916663-43916682 Msa1020490:exon 25.0%
!!! TGTAGCTTTTAGAAAAATGA+CGG - chr7_1:43916748-43916767 None:intergenic 25.0%
!!! TTTTTCTAAAAGCTACACTT+TGG + chr7_1:43916751-43916770 Msa1020490:three_prime_UTR 25.0%
! TTACTGTAATTTCATCAAAC+GGG + chr7_1:43916787-43916806 Msa1020490:three_prime_UTR 25.0%
! TTAGTGTATATTTGAAAGCA+CGG - chr7_1:43916813-43916832 None:intergenic 25.0%
! GACACAATATAAAAGGATAA+TGG + chr7_1:43917111-43917130 Msa1020490:three_prime_UTR 25.0%
AGTGTTAAGGAAGTTCAAAT+AGG - chr7_1:43913738-43913757 None:intergenic 30.0%
CATAATCAAGAGGGTAATAA+TGG + chr7_1:43914372-43914391 Msa1020490:CDS 30.0%
CTCATCATGATGAGTATTAT+TGG - chr7_1:43914481-43914500 None:intergenic 30.0%
CAACAACAAGAAGATCATTA+TGG + chr7_1:43914513-43914532 Msa1020490:CDS 30.0%
! AGGTACAGAATTTTCAACTT+GGG + chr7_1:43914589-43914608 Msa1020490:CDS 30.0%
TTGTTTGCAATTGTTTGGAA+AGG + chr7_1:43914742-43914761 Msa1020490:intron 30.0%
TGTTTGCAATTGTTTGGAAA+GGG + chr7_1:43914743-43914762 Msa1020490:intron 30.0%
! ATTTTAAATCTTGTCGGAGA+CGG - chr7_1:43914916-43914935 None:intergenic 30.0%
TCAAACTCTTACTACTAAAG+TGG + chr7_1:43914964-43914983 Msa1020490:intron 30.0%
TACTACTAAAGTGGACAAAT+CGG + chr7_1:43914973-43914992 Msa1020490:intron 30.0%
CTATTTGTAAACTAAGGTTC+TGG - chr7_1:43915097-43915116 None:intergenic 30.0%
CAGAACCTTAGTTTACAAAT+AGG + chr7_1:43915095-43915114 Msa1020490:intron 30.0%
!! TGCTGTTGTTAATTTGCATT+TGG + chr7_1:43915217-43915236 Msa1020490:intron 30.0%
TCTAGGAAACAGATTATGTA+GGG - chr7_1:43915253-43915272 None:intergenic 30.0%
TATAAAGCTCGAATACTCAT+CGG + chr7_1:43915354-43915373 Msa1020490:intron 30.0%
TCTCAAATTATTAACGGTGT+CGG + chr7_1:43915452-43915471 Msa1020490:intron 30.0%
!!! TACACTTTTTCTTTAGTGGA+AGG + chr7_1:43915529-43915548 Msa1020490:intron 30.0%
! ATCTACAGAAGTCAATTTTG+GGG - chr7_1:43915841-43915860 None:intergenic 30.0%
! GAATCTACAGAAGTCAATTT+TGG - chr7_1:43915843-43915862 None:intergenic 30.0%
GGATCGCAATATTTAAACAA+AGG + chr7_1:43915946-43915965 Msa1020490:intron 30.0%
ATCGGTAAGAACATAAATCT+TGG - chr7_1:43916158-43916177 None:intergenic 30.0%
TATGTTCTTACCGATAAGAA+TGG + chr7_1:43916163-43916182 Msa1020490:intron 30.0%
CCAATAATTGCCATTCTTAT+CGG - chr7_1:43916176-43916195 None:intergenic 30.0%
CAGTTTCAATTAGTGATACA+TGG + chr7_1:43916202-43916221 Msa1020490:intron 30.0%
! AATAGGTCAATTGTTCCTTT+TGG - chr7_1:43916387-43916406 None:intergenic 30.0%
AAACAATTAGGTATGCTTCA+AGG + chr7_1:43916508-43916527 Msa1020490:CDS 30.0%
AACATCTGTAATTAGTGATG+TGG - chr7_1:43916619-43916638 None:intergenic 30.0%
ACATCACTAATTACAGATGT+TGG + chr7_1:43916618-43916637 Msa1020490:CDS 30.0%
CTAATTACAGATGTTGGATA+TGG + chr7_1:43916624-43916643 Msa1020490:CDS 30.0%
GTAACATCATTTCAGAAAGA+GGG - chr7_1:43916657-43916676 None:intergenic 30.0%
TGTAACATCATTTCAGAAAG+AGG - chr7_1:43916658-43916677 None:intergenic 30.0%
TAAGTGCATGTTTGAATTGA+TGG + chr7_1:43916695-43916714 Msa1020490:three_prime_UTR 30.0%
GTGCTTTCAAATATACACTA+AGG + chr7_1:43916812-43916831 Msa1020490:three_prime_UTR 30.0%
TCAAATATACACTAAGGAGA+AGG + chr7_1:43916818-43916837 Msa1020490:three_prime_UTR 30.0%
! AAATGGTTGCAATTTTCTGT+TGG - chr7_1:43916857-43916876 None:intergenic 30.0%
ACAGTATTAGTAGAAAGACT+TGG - chr7_1:43916894-43916913 None:intergenic 30.0%
TATCCATGAGTGTATTACTT+TGG + chr7_1:43917156-43917175 Msa1020490:three_prime_UTR 30.0%
! ATTTTGGACAGACAGTGTTA+AGG - chr7_1:43913751-43913770 None:intergenic 35.0%
AAATCTTGCTCCAACATTTG+TGG - chr7_1:43913805-43913824 None:intergenic 35.0%
TAACCCGAAATTGGAAGAAT+CGG - chr7_1:43914138-43914157 None:intergenic 35.0%
!! TGAAGGTGTTGATCATGATA+TGG + chr7_1:43914254-43914273 Msa1020490:CDS 35.0%
ATGAAAATGAAGCTGCTTCA+TGG + chr7_1:43914280-43914299 Msa1020490:CDS 35.0%
TAGCAATGGTCATAATCAAG+AGG + chr7_1:43914362-43914381 Msa1020490:CDS 35.0%
AGCAATGGTCATAATCAAGA+GGG + chr7_1:43914363-43914382 Msa1020490:CDS 35.0%
CACAAGAATTGCAATCAACA+AGG - chr7_1:43914434-43914453 None:intergenic 35.0%
! CTTGTTGATTGCAATTCTTG+TGG + chr7_1:43914432-43914451 Msa1020490:CDS 35.0%
TGTTCCTCAAAAAAGCTATG+TGG + chr7_1:43914536-43914555 Msa1020490:CDS 35.0%
GTTCCTCAAAAAAGCTATGT+GGG + chr7_1:43914537-43914556 Msa1020490:CDS 35.0%
! CAGGTACAGAATTTTCAACT+TGG + chr7_1:43914588-43914607 Msa1020490:CDS 35.0%
! ACAGAATTTTCAACTTGGGT+TGG + chr7_1:43914593-43914612 Msa1020490:CDS 35.0%
ATTGTAACTGAATCCAGCTT+TGG - chr7_1:43914631-43914650 None:intergenic 35.0%
AAAGCTGGATTCAGTTACAA+TGG + chr7_1:43914630-43914649 Msa1020490:CDS 35.0%
TGTTTGGAAAGGGTTGAAAT+TGG + chr7_1:43914753-43914772 Msa1020490:intron 35.0%
TTCCTCAATACCAATTCAAG+AGG - chr7_1:43914845-43914864 None:intergenic 35.0%
! TCTTGAATTGGTATTGAGGA+AGG + chr7_1:43914844-43914863 Msa1020490:intron 35.0%
! CTTGAATTGGTATTGAGGAA+GGG + chr7_1:43914845-43914864 Msa1020490:intron 35.0%
! AGTGGACAAATCGGTATTTT+TGG + chr7_1:43914982-43915001 Msa1020490:intron 35.0%
GTCTAGGAAACAGATTATGT+AGG - chr7_1:43915254-43915273 None:intergenic 35.0%
AATGGCAAACAATCTAGTCT+AGG - chr7_1:43915270-43915289 None:intergenic 35.0%
TCTTTAGTGGAAGGAATCTA+AGG + chr7_1:43915538-43915557 Msa1020490:intron 35.0%
! TAGCAAGAAAGCATGATACT+TGG - chr7_1:43915565-43915584 None:intergenic 35.0%
AAGTATCATGCTTTCTTGCT+AGG + chr7_1:43915564-43915583 Msa1020490:intron 35.0%
CTTGAAGCCATTTACTAGTA+CGG + chr7_1:43915677-43915696 Msa1020490:intron 35.0%
TGTTGTTCCGTACTAGTAAA+TGG - chr7_1:43915687-43915706 None:intergenic 35.0%
! ACAAGTACAAGTAGTGTTGA+AGG + chr7_1:43915704-43915723 Msa1020490:intron 35.0%
!! ATTTTGGGGGAATTAGATTC+TGG - chr7_1:43915827-43915846 None:intergenic 35.0%
! TCTACAGAAGTCAATTTTGG+GGG - chr7_1:43915840-43915859 None:intergenic 35.0%
ACTCAGAGTTTACTGATAAG+TGG + chr7_1:43915889-43915908 Msa1020490:intron 35.0%
! TACTACAGTCACTTTGCAAT+AGG + chr7_1:43915984-43916003 Msa1020490:intron 35.0%
CCGATAAGAATGGCAATTAT+TGG + chr7_1:43916173-43916192 Msa1020490:intron 35.0%
TCAGGTTTCAGTTTCATCAA+TGG + chr7_1:43916317-43916336 Msa1020490:intron 35.0%
TCAGTTTCATCAATGGATGT+TGG + chr7_1:43916324-43916343 Msa1020490:CDS 35.0%
! GGAACAATTGACCTATTTTC+AGG + chr7_1:43916390-43916409 Msa1020490:CDS 35.0%
GAATAGAAGGACCTGAAAAT+AGG - chr7_1:43916404-43916423 None:intergenic 35.0%
TGGGAAGACATTTGAATAGA+AGG - chr7_1:43916417-43916436 None:intergenic 35.0%
TCTATCCATTGGAGAGAAAT+GGG - chr7_1:43916436-43916455 None:intergenic 35.0%
! TCTTTTTCTCTCTGTACCTT+AGG - chr7_1:43916470-43916489 None:intergenic 35.0%
ATAAATATGCCGAATCTGCG+CGG - chr7_1:43913924-43913943 None:intergenic 40.0%
TGTCCCGATTCTTCCAATTT+CGG + chr7_1:43914131-43914150 Msa1020490:CDS 40.0%
AACCCGAAATTGGAAGAATC+GGG - chr7_1:43914137-43914156 None:intergenic 40.0%
!! CCAATTTCGGGTTACCTATA+CGG + chr7_1:43914144-43914163 Msa1020490:CDS 40.0%
TTCATCTTCGGCACCTAAAA+GGG - chr7_1:43914181-43914200 None:intergenic 40.0%
!! TGGAGAAGTTGATGAGTACT+TGG + chr7_1:43914407-43914426 Msa1020490:CDS 40.0%
GTTGATTGCAATTCTTGTGG+TGG + chr7_1:43914435-43914454 Msa1020490:CDS 40.0%
!!! TCACCCACATAGCTTTTTTG+AGG - chr7_1:43914543-43914562 None:intergenic 40.0%
TTGGAAAGGGTTGAAATTGG+TGG + chr7_1:43914756-43914775 Msa1020490:intron 40.0%
AGAGGCTCAAGATCTTGAAT+TGG - chr7_1:43914827-43914846 None:intergenic 40.0%
AGATCTTGAGCCTCTTGAAT+TGG + chr7_1:43914832-43914851 Msa1020490:intron 40.0%
AGCCTCTTGAATTGGTATTG+AGG + chr7_1:43914840-43914859 Msa1020490:intron 40.0%
GGTAAAGAGTTATACGGACA+CGG - chr7_1:43915500-43915519 None:intergenic 40.0%
CATGCTTTCTTGCTAGGAAA+CGG + chr7_1:43915570-43915589 Msa1020490:intron 40.0%
! GAATAGGTCATGGTTGATTC+TGG - chr7_1:43916357-43916376 None:intergenic 40.0%
ACCTATTCAAGAGCTCCAAA+AGG + chr7_1:43916369-43916388 Msa1020490:CDS 40.0%
!!! TCCTTTTGGAGCTCTTGAAT+AGG - chr7_1:43916373-43916392 None:intergenic 40.0%
CTCTATCCATTGGAGAGAAA+TGG - chr7_1:43916437-43916456 None:intergenic 40.0%
! ACTTTGGCTTCTCTATCCAT+TGG - chr7_1:43916447-43916466 None:intergenic 40.0%
ATAGAGAAGCCAAAGTCCTA+AGG + chr7_1:43916451-43916470 Msa1020490:CDS 40.0%
! CAAACATGCACTTAGTTCTC+TGG - chr7_1:43916689-43916708 None:intergenic 40.0%
TGCTCCAACATTTGTGGAGA+GGG - chr7_1:43913799-43913818 None:intergenic 45.0%
TTGCTCCAACATTTGTGGAG+AGG - chr7_1:43913800-43913819 None:intergenic 45.0%
TTTACAAAGAAAAGCCGCCG+GGG - chr7_1:43914034-43914053 None:intergenic 45.0%
CTTTACAAAGAAAAGCCGCC+GGG - chr7_1:43914035-43914054 None:intergenic 45.0%
GCTTTACAAAGAAAAGCCGC+CGG - chr7_1:43914036-43914055 None:intergenic 45.0%
GTGGATATCAGCATCACAAG+TGG - chr7_1:43914079-43914098 None:intergenic 45.0%
GTCCCGATTCTTCCAATTTC+GGG + chr7_1:43914132-43914151 Msa1020490:CDS 45.0%
CCGTATAGGTAACCCGAAAT+TGG - chr7_1:43914147-43914166 None:intergenic 45.0%
CTTCATCTTCGGCACCTAAA+AGG - chr7_1:43914182-43914201 None:intergenic 45.0%
!!! CTTTTAGGTGCCGAAGATGA+AGG + chr7_1:43914180-43914199 Msa1020490:CDS 45.0%
TGTTCCTGTTCAACAACAGC+AGG + chr7_1:43914569-43914588 Msa1020490:CDS 45.0%
TGTACCTGCTGTTGTTGAAC+AGG - chr7_1:43914576-43914595 None:intergenic 45.0%
GAGTTTGAGTCTTCCAAAGC+TGG + chr7_1:43914615-43914634 Msa1020490:CDS 45.0%
GCTGGATTCAGTTACAATGG+TGG + chr7_1:43914633-43914652 Msa1020490:CDS 45.0%
AACCACAGTTCGCGTAATTG+CGG + chr7_1:43915009-43915028 Msa1020490:intron 45.0%
ACAACAGCATGTCAGTCATG+TGG - chr7_1:43915206-43915225 None:intergenic 45.0%
GCTCGAATACTCATCGGATT+AGG + chr7_1:43915360-43915379 Msa1020490:intron 45.0%
!! TATTAACGGTGTCGGCATGT+CGG + chr7_1:43915460-43915479 Msa1020490:intron 45.0%
TTGGGGGAATTAGATTCTGG+AGG - chr7_1:43915824-43915843 None:intergenic 45.0%
AGTGGACAAGTCACTTGTTC+AGG + chr7_1:43915907-43915926 Msa1020490:intron 45.0%
TGGAGCTCTTGAATAGGTCA+TGG - chr7_1:43916367-43916386 None:intergenic 45.0%
GTCTTCCCATTTCTCTCCAA+TGG + chr7_1:43916428-43916447 Msa1020490:CDS 45.0%
CTCTCTGTACCTTAGGACTT+TGG - chr7_1:43916463-43916482 None:intergenic 45.0%
GGAAAGCCTATGCTGAAACT+CGG + chr7_1:43916529-43916548 Msa1020490:CDS 45.0%
! GCGAATCGACCTTTTATACG+CGG - chr7_1:43916555-43916574 None:intergenic 45.0%
AGAAAAATGACGGTGACACG+AGG - chr7_1:43916738-43916757 None:intergenic 45.0%
!! ATTATAAATTATAATCTAAA+AGG - chr7_1:43914943-43914962 None:intergenic 5.0%
!! AAAAAATTTATTATGTATAT+TGG - chr7_1:43915614-43915633 None:intergenic 5.0%
CTCCAACATTTGTGGAGAGG+GGG - chr7_1:43913797-43913816 None:intergenic 50.0%
GCTCCAACATTTGTGGAGAG+GGG - chr7_1:43913798-43913817 None:intergenic 50.0%
! TTGCAAGAGGGTTAGCAGAG+TGG - chr7_1:43914098-43914117 None:intergenic 50.0%
GAAGAATCGGGACACGTTGA+TGG - chr7_1:43914125-43914144 None:intergenic 50.0%
ATCTTCGGCACCTAAAAGGG+TGG - chr7_1:43914178-43914197 None:intergenic 50.0%
! GCCGAAGATGAAGGCTTTGT+CGG + chr7_1:43914189-43914208 Msa1020490:CDS 50.0%
GCCGACAAAGCCTTCATCTT+CGG - chr7_1:43914193-43914212 None:intergenic 50.0%
! GAAGATGAAGGCTTTGTCGG+CGG + chr7_1:43914192-43914211 Msa1020490:CDS 50.0%
CAGCATGTCAGTCATGTGGA+AGG - chr7_1:43915202-43915221 None:intergenic 50.0%
! TCATCGGATTAGGCGTGTCT+CGG + chr7_1:43915370-43915389 Msa1020490:intron 50.0%
! GGGGAATTAGATTCTGGAGG+TGG - chr7_1:43915821-43915840 None:intergenic 50.0%
GAAACTCGGCCGCGTATAAA+AGG + chr7_1:43916543-43916562 Msa1020490:CDS 50.0%
TGGAGAGGGGGAGTGATGAA+TGG - chr7_1:43913785-43913804 None:intergenic 55.0%
CTCCCCCTCTCCACAAATGT+TGG + chr7_1:43913792-43913811 Msa1020490:exon 55.0%
CACAGCCACCATAAGGTCTG+CGG + chr7_1:43913843-43913862 Msa1020490:CDS 55.0%
CATAAGGTCTGCGGCAACGT+GGG + chr7_1:43913852-43913871 Msa1020490:CDS 55.0%
! GGTTTTCTGCCGCGCAGATT+CGG + chr7_1:43913912-43913931 Msa1020490:CDS 55.0%
!! GTTGATGGCGGCTTGCAAGA+GGG - chr7_1:43914110-43914129 None:intergenic 55.0%
! GAATCGGGACACGTTGATGG+CGG - chr7_1:43914122-43914141 None:intergenic 55.0%
GGGTTACCTATACGGTCCTC+CGG + chr7_1:43914152-43914171 Msa1020490:CDS 55.0%
!! TGGTTGTGGTGGTGGTTGTG+AGG + chr7_1:43914215-43914234 Msa1020490:CDS 55.0%
!! TTGTGGTGGTGGTTGTGAGG+TGG + chr7_1:43914218-43914237 Msa1020490:CDS 55.0%
TGGTTGTGAGGTGGAGGAAG+AGG + chr7_1:43914227-43914246 Msa1020490:CDS 55.0%
TTGTGAGGTGGAGGAAGAGG+AGG + chr7_1:43914230-43914249 Msa1020490:CDS 55.0%
GTGGAGGAAGAGGAGGATGA+AGG + chr7_1:43914237-43914256 Msa1020490:CDS 55.0%
CTCCGCAATTACGCGAACTG+TGG - chr7_1:43915014-43915033 None:intergenic 55.0%
! GATTAGGCGTGTCTCGGTGT+CGG + chr7_1:43915376-43915395 Msa1020490:intron 55.0%
ATACGGACACGGACACGACT+CGG - chr7_1:43915489-43915508 None:intergenic 55.0%
TATGGTGGCTGTGGCTGAGG+TGG - chr7_1:43913836-43913855 None:intergenic 60.0%
CCTTATGGTGGCTGTGGCTG+AGG - chr7_1:43913839-43913858 None:intergenic 60.0%
CCTCAGCCACAGCCACCATA+AGG + chr7_1:43913836-43913855 Msa1020490:CDS 60.0%
CGCAGACCTTATGGTGGCTG+TGG - chr7_1:43913845-43913864 None:intergenic 60.0%
CGTTGCCGCAGACCTTATGG+TGG - chr7_1:43913851-43913870 None:intergenic 60.0%
CCACGTTGCCGCAGACCTTA+TGG - chr7_1:43913854-43913873 None:intergenic 60.0%
CCATAAGGTCTGCGGCAACG+TGG + chr7_1:43913851-43913870 Msa1020490:CDS 60.0%
! AGCATGTGACACGTGCCGCT+CGG + chr7_1:43913879-43913898 Msa1020490:CDS 60.0%
GTGGATGCGTGCATCACACG+CGG - chr7_1:43913950-43913969 None:intergenic 60.0%
GTGTGATGCACGCATCCACG+CGG + chr7_1:43913951-43913970 Msa1020490:CDS 60.0%
GTTCGTGCCTCGAGGCTACA+CGG - chr7_1:43913981-43914000 None:intergenic 60.0%
!! CGTTGATGGCGGCTTGCAAG+AGG - chr7_1:43914111-43914130 None:intergenic 60.0%
TCGGCACCTAAAAGGGTGGC+CGG - chr7_1:43914174-43914193 None:intergenic 60.0%
! GATGAAGGCTTTGTCGGCGG+TGG + chr7_1:43914195-43914214 Msa1020490:CDS 60.0%
TTTGTCGGCGGTGGTTGTGG+TGG + chr7_1:43914204-43914223 Msa1020490:CDS 60.0%
!! TGGTGGTGGTTGTGAGGTGG+AGG + chr7_1:43914221-43914240 Msa1020490:CDS 60.0%
ACGCGGCCGAGTTTCAGCAT+AGG - chr7_1:43916538-43916557 None:intergenic 60.0%
! CTGTGGCTGAGGTGGTGGTG+AGG - chr7_1:43913828-43913847 None:intergenic 65.0%
GCGGCAGAAAACCGCGCATG+GGG - chr7_1:43913905-43913924 None:intergenic 65.0%
CGCGGCAGAAAACCGCGCAT+GGG - chr7_1:43913906-43913925 None:intergenic 65.0%
AGGCTACACGGTTTGCCGCG+TGG - chr7_1:43913969-43913988 None:intergenic 65.0%
CGGCAAACCGTGTAGCCTCG+AGG + chr7_1:43913971-43913990 Msa1020490:CDS 65.0%
CTCGAGGCACGAACGCGTCT+GGG + chr7_1:43913987-43914006 Msa1020490:CDS 65.0%
CGAACGCGTCTGGGTCTGTG+AGG + chr7_1:43913996-43914015 Msa1020490:CDS 65.0%
! GGTCCTCCGGCCACCCTTTT+AGG + chr7_1:43914165-43914184 Msa1020490:CDS 65.0%
GCACCTAAAAGGGTGGCCGG+AGG - chr7_1:43914171-43914190 None:intergenic 65.0%
! GGCTTTGTCGGCGGTGGTTG+TGG + chr7_1:43914201-43914220 Msa1020490:CDS 65.0%
GGTGGCTGTGGCTGAGGTGG+TGG - chr7_1:43913833-43913852 None:intergenic 70.0%
AAACCGCGCATGGGGCCGAG+CGG - chr7_1:43913897-43913916 None:intergenic 70.0%
GCGCGGCAGAAAACCGCGCA+TGG - chr7_1:43913907-43913926 None:intergenic 70.0%
CCAGACGCGTTCGTGCCTCG+AGG - chr7_1:43913989-43914008 None:intergenic 70.0%
CCTCGAGGCACGAACGCGTC+TGG + chr7_1:43913986-43914005 Msa1020490:CDS 70.0%
GGGTGGCCGGAGGACCGTAT+AGG - chr7_1:43914161-43914180 None:intergenic 70.0%
GTCGGCGGTGGTTGTGGTGG+TGG + chr7_1:43914207-43914226 Msa1020490:CDS 70.0%
TGAGGCCTGCGAGCGTGCCC+CGG + chr7_1:43914014-43914033 Msa1020490:CDS 75.0%
!! GTGCCGCTCGGCCCCATGCG+CGG + chr7_1:43913891-43913910 Msa1020490:CDS 80.0%
! GGCCTGCGAGCGTGCCCCGG+CGG + chr7_1:43914017-43914036 Msa1020490:CDS 85.0%
! AGCCGCCGGGGCACGCTCGC+AGG - chr7_1:43914022-43914041 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 43913702 43917179 43913702 ID=Msa1020490;Name=Msa1020490
chr7_1 mRNA 43913702 43917179 43913702 ID=Msa1020490-mRNA-1;Parent=Msa1020490;Name=Msa1020490-mRNA-1;_AED=0.00;_eAED=0.00;_QI=106|1|1|1|1|1|2|514|402
chr7_1 exon 43913702 43914671 43913702 ID=Msa1020490-mRNA-1:exon:8518;Parent=Msa1020490-mRNA-1
chr7_1 exon 43916321 43917179 43916321 ID=Msa1020490-mRNA-1:exon:8519;Parent=Msa1020490-mRNA-1
chr7_1 five_prime_UTR 43913702 43913807 43913702 ID=Msa1020490-mRNA-1:five_prime_utr;Parent=Msa1020490-mRNA-1
chr7_1 CDS 43913808 43914671 43913808 ID=Msa1020490-mRNA-1:cds;Parent=Msa1020490-mRNA-1
chr7_1 CDS 43916321 43916665 43916321 ID=Msa1020490-mRNA-1:cds;Parent=Msa1020490-mRNA-1
chr7_1 three_prime_UTR 43916666 43917179 43916666 ID=Msa1020490-mRNA-1:three_prime_utr;Parent=Msa1020490-mRNA-1
Gene Sequence

>Msa1020490

ATGTTGGAGCAAGATTTCCTCACCACCACCTCAGCCACAGCCACCATAAGGTCTGCGGCAACGTGGGCACGAGCATGTGACACGTGCCGCTCGGCCCCATGCGCGGTTTTCTGCCGCGCAGATTCGGCATATTTATGTGCCGCGTGTGATGCACGCATCCACGCGGCAAACCGTGTAGCCTCGAGGCACGAACGCGTCTGGGTCTGTGAGGCCTGCGAGCGTGCCCCGGCGGCTTTTCTTTGTAAAGCTGATGCTGCTTCTCTTTGCTCCACTTGTGATGCTGATATCCACTCTGCTAACCCTCTTGCAAGCCGCCATCAACGTGTCCCGATTCTTCCAATTTCGGGTTACCTATACGGTCCTCCGGCCACCCTTTTAGGTGCCGAAGATGAAGGCTTTGTCGGCGGTGGTTGTGGTGGTGGTTGTGAGGTGGAGGAAGAGGAGGATGAAGGTGTTGATCATGATATGGAAGATGAAAATGAAGCTGCTTCATGGCTTTTGTTGAATCCTCTAAAGAACATCAATAACAATAGTAACAACAATAACAACAACATTAGCAATGGTCATAATCAAGAGGGTAATAATGGATTTTTGTTTAGTGGAGAAGTTGATGAGTACTTGGACCTTGTTGATTGCAATTCTTGTGGTGGTGATGAAAACACTTTCAATACCAATAATACTCATCATGATGAGTATAGTCAACAACAACAACAAGAAGATCATTATGGTGTTCCTCAAAAAAGCTATGTGGGTGATAGTGTTGTTCCTGTTCAACAACAGCAGGTACAGAATTTTCAACTTGGGTTGGAGTTTGAGTCTTCCAAAGCTGGATTCAGTTACAATGGTGGTTCTATTAGTCAAAGTGTTTCAGTTTCATCAATGGATGTTGGTGTTGTACCAGAATCAACCATGACCTATTCAAGAGCTCCAAAAGGAACAATTGACCTATTTTCAGGTCCTTCTATTCAAATGTCTTCCCATTTCTCTCCAATGGATAGAGAAGCCAAAGTCCTAAGGTACAGAGAGAAAAAGAAGACAAGAAAATTTGAGAAAACAATTAGGTATGCTTCAAGGAAAGCCTATGCTGAAACTCGGCCGCGTATAAAAGGTCGATTCGCGAAGAGAACAGATGTAGAAGCTGAAGTTGATCAAATGTTTTCCACATCACTAATTACAGATGTTGGATATGGAATTGTTCCCTCTTTCTGA

Protein sequence

>Msa1020490

MLEQDFLTTTSATATIRSAATWARACDTCRSAPCAVFCRADSAYLCAACDARIHAANRVASRHERVWVCEACERAPAAFLCKADAASLCSTCDADIHSANPLASRHQRVPILPISGYLYGPPATLLGAEDEGFVGGGCGGGCEVEEEEDEGVDHDMEDENEAASWLLLNPLKNINNNSNNNNNNISNGHNQEGNNGFLFSGEVDEYLDLVDCNSCGGDENTFNTNNTHHDEYSQQQQQEDHYGVPQKSYVGDSVVPVQQQQVQNFQLGLEFESSKAGFSYNGGSISQSVSVSSMDVGVVPESTMTYSRAPKGTIDLFSGPSIQMSSHFSPMDREAKVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTSLITDVGYGIVPSF*