AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1239190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239190 MtrunA17_Chr8g0350951 95.714 1050 41 3 1 1047 1 1049 0.0 1989
Msa1239190 MtrunA17_Chr7g0246481 74.976 1047 223 12 21 1047 87 1114 0.0 1568
Msa1239190 MtrunA17_Chr5g0398161 68.005 847 261 5 205 1047 14 854 0.0 1214
Msa1239190 MtrunA17_Chr5g0398171 67.887 847 256 6 205 1047 14 848 0.0 1201
Msa1239190 MtrunA17_Chr3g0143471 53.154 856 361 10 228 1046 13 865 0.0 923
Msa1239190 MtrunA17_Chr8g0380631 53.081 844 365 11 226 1046 13 848 0.0 894
Msa1239190 MtrunA17_Chr5g0406161 51.684 861 362 11 225 1040 13 864 0.0 884
Msa1239190 MtrunA17_Chr4g0003411 47.348 792 384 12 257 1036 26 796 0.0 731
Msa1239190 MtrunA17_Chr2g0333021 45.884 826 406 14 223 1036 1 797 0.0 729
Msa1239190 MtrunA17_Chr3g0137791 45.107 838 407 18 227 1037 4 815 0.0 709
Msa1239190 MtrunA17_Chr3g0137821 43.442 831 427 17 227 1037 4 811 0.0 661
Msa1239190 MtrunA17_Chr2g0330431 41.330 767 382 21 280 1036 36 744 2.24e-178 539
Msa1239190 MtrunA17_Chr8g0341931 40.000 775 375 23 280 1036 39 741 1.49e-170 518
Msa1239190 MtrunA17_Chr1g0192401 35.443 237 118 10 738 966 735 944 1.72e-24 110
Msa1239190 MtrunA17_Chr1g0192401 27.917 240 127 10 435 658 355 564 6.43e-17 86.3
Msa1239190 MtrunA17_Chr5g0406151 65.079 63 22 0 556 618 16 78 1.35e-23 95.9
Msa1239190 MtrunA17_Chr2g0295411 34.171 199 99 8 738 931 785 956 1.06e-17 89.0
Msa1239190 MtrunA17_Chr2g0295411 28.631 241 125 11 435 658 381 591 2.94e-14 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239190 AT2G42010.1 76.362 918 204 8 132 1047 177 1083 0.0 1458
Msa1239190 AT2G42010.2 74.337 943 204 9 132 1047 177 1108 0.0 1444
Msa1239190 AT4G00240.1 70.544 937 233 7 111 1047 34 927 0.0 1353
Msa1239190 AT4G00240.2 72.382 869 195 5 179 1047 69 892 0.0 1295
Msa1239190 AT4G00240.3 77.992 777 168 2 271 1047 2 775 0.0 1290
Msa1239190 AT4G11850.1 68.371 841 254 5 213 1047 24 858 0.0 1217
Msa1239190 AT4G11840.1 65.896 865 279 7 193 1047 8 866 0.0 1207
Msa1239190 AT4G11830.2 65.035 858 282 6 201 1047 6 856 0.0 1174
Msa1239190 AT4G11840.2 64.277 865 263 8 193 1047 8 836 0.0 1157
Msa1239190 AT4G11830.1 66.709 796 249 4 261 1047 36 824 0.0 1139
Msa1239190 AT4G35790.2 51.620 864 370 9 220 1046 4 856 0.0 892
Msa1239190 AT4G35790.1 50.971 875 370 10 220 1046 4 867 0.0 885
Msa1239190 AT4G11830.4 64.929 633 216 4 201 831 6 634 0.0 856
Msa1239190 AT4G11830.3 65.854 615 204 4 201 813 6 616 0.0 844
Msa1239190 AT3G15730.1 46.238 824 401 16 227 1037 5 799 0.0 731
Msa1239190 AT1G52570.1 45.763 826 408 15 223 1036 1 798 0.0 723
Msa1239190 AT1G52570.3 45.763 826 408 15 223 1036 1 798 0.0 723
Msa1239190 AT1G52570.2 45.763 826 408 15 223 1036 1 798 0.0 723
Msa1239190 AT4G35790.3 50.147 682 300 7 220 865 4 681 0.0 682
Msa1239190 AT5G25370.1 44.525 831 414 16 226 1036 5 808 0.0 667
Msa1239190 AT5G25370.3 44.525 831 414 16 226 1036 5 808 0.0 667
Msa1239190 AT5G25370.2 44.525 831 414 16 226 1036 5 808 0.0 667
Msa1239190 AT5G25370.4 46.809 752 359 14 302 1036 6 733 0.0 653
Msa1239190 AT1G55180.1 38.768 779 386 26 280 1036 41 750 2.14e-157 485
Msa1239190 AT1G55180.2 38.768 779 386 26 280 1036 19 728 2.46e-157 484
Msa1239190 AT3G05630.1 35.802 243 105 13 738 964 714 921 3.84e-22 103
Msa1239190 AT3G05630.1 28.378 222 114 9 447 653 381 572 1.21e-12 72.8
Msa1239190 AT3G16785.3 33.333 219 112 9 735 947 756 946 5.42e-19 93.6
Msa1239190 AT3G16785.3 31.224 237 114 11 451 673 390 591 8.48e-15 80.1
Msa1239190 AT3G16785.2 33.333 219 112 9 735 947 756 946 5.42e-19 93.6
Msa1239190 AT3G16785.2 31.224 237 114 11 451 673 390 591 8.48e-15 80.1
Msa1239190 AT3G16785.6 33.333 219 112 9 735 947 756 946 6.04e-19 93.6
Msa1239190 AT3G16785.6 31.224 237 114 11 451 673 390 591 9.20e-15 79.7
Msa1239190 AT3G16785.5 33.333 219 112 9 735 947 756 946 6.04e-19 93.6
Msa1239190 AT3G16785.5 31.224 237 114 11 451 673 390 591 9.20e-15 79.7
Msa1239190 AT3G16785.1 33.333 219 112 9 735 947 756 946 7.06e-19 93.2
Msa1239190 AT3G16785.1 31.224 237 114 11 451 673 390 591 8.71e-15 80.1
Msa1239190 AT3G16785.4 33.333 219 112 9 735 947 756 946 8.06e-19 93.2
Msa1239190 AT3G16785.4 31.224 237 114 11 451 673 390 591 8.00e-15 80.1

Find 323 sgRNAs with CRISPR-Local

Find 535 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTACCGATGTCCTTATTT+TGG 0.167559 8_2:+20432592 None:intergenic
GATATGTTTCATAAGACTTT+AGG 0.182948 8_2:-20435418 Msa1239190:CDS
AAGGCTTTCCATTGCTATTA+AGG 0.189314 8_2:+20435086 None:intergenic
CCACTCAAAGGATTCTATTT+TGG 0.190411 8_2:-20431245 Msa1239190:CDS
TGAGAGTGCTTCTTCTTGTT+TGG 0.243527 8_2:-20434670 Msa1239190:CDS
GTATCGACATTTCAGATTAA+AGG 0.247295 8_2:-20429438 Msa1239190:three_prime_UTR
TTATGAAACATATCCATATT+TGG 0.256140 8_2:+20435427 None:intergenic
CATGAGAATATTTCTGTATC+TGG 0.275594 8_2:-20430898 Msa1239190:CDS
CCTACCTCAAGAAGCATTCT+TGG 0.277370 8_2:-20434641 Msa1239190:CDS
AATTGATTCAATGATAAGTT+TGG 0.279648 8_2:-20428997 Msa1239190:three_prime_UTR
GATGGATTTGGAGGAGGATA+TGG 0.282118 8_2:+20436090 None:intergenic
AAGCGTTTGGTTTACATTAC+AGG 0.283048 8_2:-20434800 Msa1239190:CDS
ATACCCTTGGTGAGCTTCTA+AGG 0.294962 8_2:-20434712 Msa1239190:CDS
TGCTAAGAATCTTCCAAATA+TGG 0.296309 8_2:-20435440 Msa1239190:CDS
GAGAGTGCTTCTTCTTGTTT+GGG 0.298793 8_2:-20434669 Msa1239190:CDS
GATGATGAATATGTGATAAT+TGG 0.298861 8_2:-20430375 Msa1239190:CDS
GTAGGAAACTCTAAAGGTTT+TGG 0.302615 8_2:+20435976 None:intergenic
CATGGTTCTGCACCTCCTTA+TGG 0.304777 8_2:-20436144 Msa1239190:CDS
AATATTCTCATGCATATCTA+TGG 0.316257 8_2:+20430909 None:intergenic
TATTGGTGTTGTAGCGATTC+CGG 0.316730 8_2:-20435155 Msa1239190:CDS
TTTCTTGCCCATGTATATTC+AGG 0.321637 8_2:+20430282 None:intergenic
ATACAATTGGAGCCAAAATA+AGG 0.327510 8_2:-20432604 Msa1239190:CDS
TAGAAGGAATGTGAAGAATT+TGG 0.333420 8_2:+20436009 None:intergenic
GATGTGTTTGGTAAATTTCC+TGG 0.335995 8_2:-20435394 Msa1239190:CDS
GGGTTTGAACCATCACTAAT+TGG 0.336616 8_2:+20435850 None:intergenic
ATATGTTTCATAAGACTTTA+GGG 0.339016 8_2:-20435417 Msa1239190:CDS
TTTGGTGGATATGATTCATT+TGG 0.343332 8_2:+20436027 None:intergenic
TCATCGGTTCTTCATACAAT+TGG 0.344460 8_2:-20432617 Msa1239190:CDS
TACAAACTACTTATTTCATT+TGG 0.349179 8_2:-20429064 Msa1239190:three_prime_UTR
CCCTTTCTATCAACTTCTAC+AGG 0.353800 8_2:+20429668 None:intergenic
ACCTTTATTGATCCATCTCT+TGG 0.355946 8_2:+20432858 None:intergenic
CTCTTCATTTAAAACTGAAT+AGG 0.356330 8_2:+20435678 None:intergenic
CCATGATCAAGCATGACATT+AGG 0.363751 8_2:+20434881 None:intergenic
TGTATGTGTTTGTGCTTCAT+AGG 0.367122 8_2:-20429343 Msa1239190:three_prime_UTR
CTTTGTTACATATGCACAAA+AGG 0.376414 8_2:+20436307 None:intergenic
CTCCCCACCATCCCCTCTTT+AGG 0.378668 8_2:-20433860 Msa1239190:CDS
AAATTGTTTCCAGTTCATTT+CGG 0.380551 8_2:+20429736 None:intergenic
GGCACAAAGTTAGGTTGTTA+AGG 0.380637 8_2:-20434766 Msa1239190:CDS
ACATTGGTGGTCATTAGAAT+AGG 0.384231 8_2:-20429528 Msa1239190:three_prime_UTR
AAACATCAACCAGCGTTCTA+TGG 0.386031 8_2:-20430346 Msa1239190:CDS
CTCAATGGAAAATATGTTCC+CGG 0.386858 8_2:+20434959 None:intergenic
GGTTGTGATAGTCATCCTTA+TGG 0.388154 8_2:+20433823 None:intergenic
GCAATAGCGAAAATCCTGTT+TGG 0.388642 8_2:-20435264 Msa1239190:CDS
TACAAGGCATTGGTTGAAGT+TGG 0.391694 8_2:-20430994 Msa1239190:CDS
TGGACAGTGTTGGCGTGATA+TGG 0.393113 8_2:-20434843 Msa1239190:CDS
ATGGATATAGGATGTCACTA+TGG 0.393442 8_2:-20429838 Msa1239190:CDS
TCTTCTAATTCTCAGGAAGT+TGG 0.393929 8_2:-20433999 Msa1239190:intron
CATGATCAAGCATGACATTA+GGG 0.394000 8_2:+20434882 None:intergenic
GTTCATACCTGTGGAGTATT+CGG 0.394127 8_2:+20430862 None:intergenic
CACCGAGTCATCATTTGAAC+CGG 0.394903 8_2:+20435555 None:intergenic
ATTGGAGGGTATTGTTGGTA+AGG 0.395824 8_2:+20435925 None:intergenic
TAAATGATCAGTTTCTCTAT+TGG 0.398159 8_2:+20435022 None:intergenic
TTTGGATAAGGAGCAGATAC+TGG 0.400990 8_2:+20436045 None:intergenic
TTTAAATGAAGAGAAGAAAG+AGG 0.401479 8_2:-20435668 Msa1239190:CDS
GGTCCGTGTGGCACAAAGTT+AGG 0.402600 8_2:-20434775 Msa1239190:CDS
ATGTTCAGATATCTGATAAC+AGG 0.405284 8_2:-20435726 Msa1239190:CDS
GCATGAGATGGTTGAGAAGT+AGG 0.408266 8_2:+20435958 None:intergenic
ACTTAATGGCAGGGTAATAC+TGG 0.408891 8_2:-20433281 Msa1239190:intron
TATGGATCATGAGATGGATT+TGG 0.409896 8_2:+20436078 None:intergenic
CTTCCGCCTTAGCGAGGTCC+AGG 0.412129 8_2:-20429477 Msa1239190:three_prime_UTR
AATGGTTAGATTCTCTTGAA+TGG 0.413213 8_2:+20429574 None:intergenic
GGAGCAGGACCGAACTATAT+TGG 0.413862 8_2:-20434986 Msa1239190:CDS
CATTGATTGGAGGGTATTGT+TGG 0.417731 8_2:+20435920 None:intergenic
CAATAGCGAAAATCCTGTTT+GGG 0.418333 8_2:-20435263 Msa1239190:CDS
CTCACACAGTCGAGGCTCTC+TGG 0.418763 8_2:+20429776 None:intergenic
GGAGGATATGCATAAGGGTT+TGG 0.419596 8_2:+20436117 None:intergenic
GGAGGGTATTGGTGAGGGTA+AGG 0.421455 8_2:+20435814 None:intergenic
GGAGGGTATTGGTGAGGGTA+AGG 0.421455 8_2:+20435871 None:intergenic
CATTGGTGGTCATTAGAATA+GGG 0.421927 8_2:-20429527 Msa1239190:three_prime_UTR
CCTAATGTCATGCTTGATCA+TGG 0.423373 8_2:-20434881 Msa1239190:CDS
TACAGCATTCAATAAAGAAA+TGG 0.425064 8_2:+20435309 None:intergenic
ATTGTTCCAGCTCAGTATAA+AGG 0.425839 8_2:-20435514 Msa1239190:CDS
GATACTGGTGGAGGTGCATA+TGG 0.426408 8_2:+20436060 None:intergenic
ATCATTTATCATCAAGGAGT+TGG 0.426597 8_2:-20435007 Msa1239190:CDS
GGTAAGGTTAGACCTCTTCC+TGG 0.426834 8_2:-20429647 Msa1239190:CDS
GGGTTAGAACCATCACTAAC+TGG 0.428784 8_2:+20435793 None:intergenic
GAATAGGAATGTGTCATTAC+TGG 0.430913 8_2:+20435694 None:intergenic
CATACGTCAAGCGAAGCGTT+TGG 0.432042 8_2:-20434813 Msa1239190:CDS
TAAGATATTACCGTGAAAGT+AGG 0.435210 8_2:+20433801 None:intergenic
TTTGGAGGAGGATATGGATA+TGG 0.435229 8_2:+20436096 None:intergenic
ACAAGGCATTGGTTGAAGTT+GGG 0.435453 8_2:-20430993 Msa1239190:CDS
TGCTAATAATTTAATTCCAA+TGG 0.435805 8_2:-20431367 Msa1239190:CDS
TCAGCAGCATGATGCGCAAC+AGG 0.436587 8_2:+20435223 None:intergenic
ACATAGCTGGGCTAAGCAAC+AGG 0.437268 8_2:-20434320 Msa1239190:intron
TTGTTCCAGCTCAGTATAAA+GGG 0.438417 8_2:-20435513 Msa1239190:CDS
GGGTTTGAACCATCATTGAT+TGG 0.439578 8_2:+20435907 None:intergenic
GCCAAGAGATGGATCAATAA+AGG 0.440241 8_2:-20432859 Msa1239190:intron
GCACAAAGTTAGGTTGTTAA+GGG 0.442700 8_2:-20434765 Msa1239190:CDS
ACAGTTCCACCTTTCCTCAA+TGG 0.443351 8_2:+20434944 None:intergenic
AATGGAAAGCCTTGTAAGCC+AGG 0.443422 8_2:-20435076 Msa1239190:CDS
GAACATTCTTACTCTGGTGT+GGG 0.443763 8_2:-20435604 Msa1239190:CDS
GAAACTCCTATGTAGGTTCA+TGG 0.443955 8_2:-20429857 Msa1239190:intron
TTAAGAGCTGCGAAACCTAC+AGG 0.446159 8_2:-20433167 Msa1239190:CDS
GATCCATCTCTTGGCTCCTT+CGG 0.448291 8_2:+20432867 None:intergenic
GGATCATGAGATGGATTTGG+AGG 0.448578 8_2:+20436081 None:intergenic
GAACAATGTCCGAAATGAAC+TGG 0.448762 8_2:-20429745 Msa1239190:CDS
GCTCAAGATAGAAAGAATTC+CGG 0.449637 8_2:-20433108 Msa1239190:CDS
GGATATGATTCATTTGGATA+AGG 0.451985 8_2:+20436033 None:intergenic
GGATATGGAGGATATGCATA+AGG 0.452165 8_2:+20436111 None:intergenic
GACTTGCATTCTAAAATTGA+CGG 0.452345 8_2:-20433233 Msa1239190:CDS
CATCACTAATTGGAGGGTAT+TGG 0.452496 8_2:+20435860 None:intergenic
GTGGTAGGTTCACAGCTTAT+TGG 0.454045 8_2:-20435172 Msa1239190:CDS
GTGTCGACATGTGTCGTATT+TGG 0.455742 8_2:-20429366 Msa1239190:three_prime_UTR
TTCCATTGCTATTAAGGATA+GGG 0.456177 8_2:+20435092 None:intergenic
TCAGATACACGGAGAATATC+CGG 0.456785 8_2:+20433089 None:intergenic
GCACCTGTTGGAACACCCTC+TGG 0.456870 8_2:+20431270 None:intergenic
AAGACTTTAGGGGATGTGTT+TGG 0.458184 8_2:-20435406 Msa1239190:CDS
TCCTGCAGCTTGGCATGCTC+AGG 0.459522 8_2:-20433042 Msa1239190:intron
CCCTGTAGAAGTTGATAGAA+AGG 0.459627 8_2:-20429669 Msa1239190:CDS
CATGGGATGCATTATGTTCA+TGG 0.459721 8_2:-20434863 Msa1239190:CDS
TTTCCATTGCTATTAAGGAT+AGG 0.460310 8_2:+20435091 None:intergenic
TGGCCAGAGGGTGTTCCAAC+AGG 0.460902 8_2:-20431273 Msa1239190:CDS
GCTTCTAAGGTCTAAGTCTC+AGG 0.460955 8_2:-20434699 Msa1239190:CDS
ATCTTTAGCGCAATTTCCAT+TGG 0.466239 8_2:+20431351 None:intergenic
CTATGTAGGTTCATGGATAT+AGG 0.466420 8_2:-20429850 Msa1239190:intron
TCTTTATTGAATGCTGTAGT+TGG 0.468089 8_2:-20435304 Msa1239190:CDS
TTGAAATATTTGCTCTTGCA+TGG 0.468097 8_2:-20435487 Msa1239190:CDS
GTATAATCCGATGCCTTACC+AGG 0.470375 8_2:+20434731 None:intergenic
CATCACTAACTGGAGGGTAT+TGG 0.470839 8_2:+20435803 None:intergenic
TGAAAGTGTTGCTCCCAAAC+AGG 0.472685 8_2:+20435250 None:intergenic
CTATCACAACCCTACTTTCA+CGG 0.473663 8_2:-20433811 Msa1239190:intron
ACTATCTTTCCTCCCACATC+AGG 0.473862 8_2:+20429611 None:intergenic
TTCATTTGGTCTTTGTCCGC+CGG 0.479025 8_2:-20429050 Msa1239190:three_prime_UTR
AGAACGCTGGTTGATGTTTG+CGG 0.480859 8_2:+20430350 None:intergenic
AATGACCCTTTATACTGAGC+TGG 0.480884 8_2:+20435508 None:intergenic
ACCGAACTATATTGGTGTGC+CGG 0.482130 8_2:-20434978 Msa1239190:CDS
AAAACAGCACCTGGCTTACA+AGG 0.482429 8_2:+20435067 None:intergenic
ATGATTTATGTTCATTCGAA+AGG 0.484248 8_2:-20430408 Msa1239190:CDS
CTCTATTGGTAGGAACTGAA+TGG 0.487662 8_2:+20435036 None:intergenic
CCTGAGTATAATTGTTCGAC+CGG 0.487902 8_2:+20435136 None:intergenic
GGCTATGAACATTCTTACTC+TGG 0.488188 8_2:-20435610 Msa1239190:CDS
TCATGAGATGGATTTGGAGG+AGG 0.488501 8_2:+20436084 None:intergenic
CCTACCAACCTGAATATACA+TGG 0.489487 8_2:-20430290 Msa1239190:CDS
TGAACATTCTTACTCTGGTG+TGG 0.491028 8_2:-20435605 Msa1239190:CDS
AATAAAGAAATGGACACATA+AGG 0.491292 8_2:+20435319 None:intergenic
GTCAAAACATCATAAGCTGC+TGG 0.491386 8_2:+20433209 None:intergenic
ACCTGAGCATGCCAAGCTGC+AGG 0.492275 8_2:+20433041 None:intergenic
CGAGACAGTTTACAAGGCAT+TGG 0.494872 8_2:-20431004 Msa1239190:CDS
ATTGATTCAAATTCTGTCAA+GGG 0.495463 8_2:-20432894 Msa1239190:CDS
CAAACGCTTCGCTTGACGTA+TGG 0.496371 8_2:+20434814 None:intergenic
GGACGCTGTTGGACCTGGTA+AGG 0.497063 8_2:-20434744 Msa1239190:CDS
CCATGTATATTCAGGTTGGT+AGG 0.504855 8_2:+20430290 None:intergenic
GGAGGAGGATATGGATATGG+AGG 0.505300 8_2:+20436099 None:intergenic
AATGTGAGTAATAAGATTGA+GGG 0.506928 8_2:-20435370 Msa1239190:CDS
AGAAGTTGATAGAAAGGGTA+AGG 0.508470 8_2:-20429663 Msa1239190:CDS
CTCATAAGATCATTCAAATG+AGG 0.508836 8_2:+20435751 None:intergenic
TGTCCTAAAGAGGGGATGGT+GGG 0.510058 8_2:+20433857 None:intergenic
AAGGCATCGGATTATACCCT+TGG 0.512333 8_2:-20434725 Msa1239190:CDS
CCCGGCACACCAATATAGTT+CGG 0.512639 8_2:+20434977 None:intergenic
TACCCTATCCTTAATAGCAA+TGG 0.512742 8_2:-20435094 Msa1239190:CDS
AACATTCTTACTCTGGTGTG+GGG 0.512770 8_2:-20435603 Msa1239190:CDS
GTAATTGTAGATGCTGATGC+TGG 0.513557 8_2:-20433948 Msa1239190:CDS
ATCTTATTACTCACATTACC+AGG 0.515749 8_2:+20435376 None:intergenic
AATTGATTCAAATTCTGTCA+AGG 0.515799 8_2:-20432895 Msa1239190:CDS
TATTGAATGCTGTAGTTGGT+AGG 0.515974 8_2:-20435300 Msa1239190:CDS
TGGAATCTTAAGTTCGAACC+TGG 0.517092 8_2:+20429135 None:intergenic
GGGTATTGTTGGTAAGGGTA+AGG 0.517750 8_2:+20435931 None:intergenic
TTGGAGGGTATTGTTGGTAA+GGG 0.519129 8_2:+20435926 None:intergenic
CTTTGAGTGGCAGCACCTGT+TGG 0.520449 8_2:+20431258 None:intergenic
CAAAATGTTTCAGCTTATCC+CGG 0.520633 8_2:-20435574 Msa1239190:CDS
TTAAGGGACGCTGTTGGACC+TGG 0.523363 8_2:-20434749 Msa1239190:CDS
CTTTGTTGCATATGAACACA+AGG 0.523385 8_2:+20436255 None:intergenic
GTATGTGTTTGTGCTTCATA+GGG 0.524121 8_2:-20429342 Msa1239190:three_prime_UTR
AACTCTTCTTGACCAGGAAG+AGG 0.525086 8_2:+20429635 None:intergenic
AGGGACACTGAGATTGCAAT+GGG 0.525724 8_2:-20430315 Msa1239190:CDS
ACTACATCATAACTCTTCCC+TGG 0.525985 8_2:+20429459 None:intergenic
TAATGTGAGTAATAAGATTG+AGG 0.526007 8_2:-20435371 Msa1239190:CDS
CCAAGAATGCTTCTTGAGGT+AGG 0.526097 8_2:+20434641 None:intergenic
CTGTCTGCAGTGTCCTAAAG+AGG 0.526835 8_2:+20433847 None:intergenic
AGTGTTACTTTGTCCTCGCA+TGG 0.527308 8_2:-20434353 Msa1239190:CDS
ACATTCTTACTCTGGTGTGG+GGG 0.527901 8_2:-20435602 Msa1239190:CDS
AAAATTGTAGCATTTGTTGG+AGG 0.528231 8_2:-20433912 Msa1239190:CDS
AAGATATTACCGTGAAAGTA+GGG 0.529154 8_2:+20433802 None:intergenic
TTACTTTGTCCTCGCATGGC+CGG 0.529499 8_2:-20434349 Msa1239190:CDS
GACACTGCAGACAGTCCATA+AGG 0.530024 8_2:-20433838 Msa1239190:CDS
GGAGGGCTTGATTTGTGTGA+CGG 0.530764 8_2:-20433894 Msa1239190:CDS
CCGAACTATATTGGTGTGCC+GGG 0.531404 8_2:-20434977 Msa1239190:CDS
GATATGGAGGATATGCATAA+GGG 0.532623 8_2:+20436112 None:intergenic
CATTCTTACTCTGGTGTGGG+GGG 0.533044 8_2:-20435601 Msa1239190:CDS
CAAGAATGCTTCTTGAGGTA+GGG 0.533945 8_2:+20434642 None:intergenic
GTACATTCTTCCCACATACA+AGG 0.534684 8_2:+20432721 None:intergenic
TTGAACCATCATTGATTGGA+GGG 0.535519 8_2:+20435911 None:intergenic
TATCATCAAGGAGTTGGAGC+AGG 0.535716 8_2:-20435001 Msa1239190:CDS
TGAGAAGTAGGAAACTCTAA+AGG 0.536004 8_2:+20435970 None:intergenic
TTTGTTACATATGCACAAAA+GGG 0.536174 8_2:+20436308 None:intergenic
TGACAAACTTTGAGGAGCGC+TGG 0.536495 8_2:-20433190 Msa1239190:CDS
TAAGGGTTTGGATATCCATA+AGG 0.536548 8_2:+20436129 None:intergenic
TGATCAGTTTCTCTATTGGT+AGG 0.538674 8_2:+20435026 None:intergenic
TGTGTCATTACTGGTGCACT+TGG 0.538843 8_2:+20435703 None:intergenic
TCACTATGGGCAGAACATAC+AGG 0.539487 8_2:-20429824 Msa1239190:CDS
AGCGTTTGGTTTACATTACA+GGG 0.540578 8_2:-20434799 Msa1239190:CDS
CAATACCCTCCAATCAATGA+TGG 0.540902 8_2:-20435916 Msa1239190:CDS
CTCTTCCCTGGACCTCGCTA+AGG 0.542162 8_2:+20429471 None:intergenic
AAAATGTGTGCAGGCGAGAA+CGG 0.542348 8_2:-20429109 Msa1239190:three_prime_UTR
TTGCCCATGTATATTCAGGT+TGG 0.543355 8_2:+20430286 None:intergenic
ATAGAGAATCAATATTTCAT+CGG 0.543982 8_2:-20432633 Msa1239190:CDS
AAATTGTAGCATTTGTTGGA+GGG 0.546801 8_2:-20433911 Msa1239190:CDS
AAACTGATCATTTATCATCA+AGG 0.547611 8_2:-20435013 Msa1239190:CDS
CTGGAACAATCTGCAAACTC+TGG 0.547794 8_2:+20435527 None:intergenic
CCTGTAGAAGTTGATAGAAA+GGG 0.549119 8_2:-20429668 Msa1239190:CDS
GGAACACCCTCTGGCCACAT+TGG 0.550542 8_2:+20431279 None:intergenic
GGTAAGGAGAACTATGAGGA+GGG 0.552391 8_2:+20435830 None:intergenic
GGTAAGGAGAACTATGAGGA+GGG 0.552391 8_2:+20435887 None:intergenic
TTTCCGAAGGAGCCAAGAGA+TGG 0.552961 8_2:-20432870 Msa1239190:CDS
GTAATACTGGTGGTTGTCCA+CGG 0.553468 8_2:-20433268 Msa1239190:CDS
CTCCGTGTGTTTATTTGAGT+AGG 0.555611 8_2:+20429176 None:intergenic
CAACCTAACTTTGTGCCACA+CGG 0.557240 8_2:+20434772 None:intergenic
CCTTTCTATCAACTTCTACA+GGG 0.557489 8_2:+20429669 None:intergenic
CAAGATGCTCATGTTCCAGA+TGG 0.558067 8_2:-20434911 Msa1239190:CDS
ATTCCACATAAAATGTGTGC+AGG 0.560036 8_2:-20429118 Msa1239190:three_prime_UTR
TCAAGAAGAGTTTCCTGATG+TGG 0.560822 8_2:-20429624 Msa1239190:CDS
ACATTAGGGAGACATCCATC+TGG 0.560998 8_2:+20434896 None:intergenic
AGAGCCTCGACTGTGTGAGA+AGG 0.561093 8_2:-20429772 Msa1239190:CDS
TGAGGGTAAGGAGAACTATG+AGG 0.565689 8_2:+20435826 None:intergenic
TGAGGGTAAGGAGAACTATG+AGG 0.565689 8_2:+20435883 None:intergenic
ATCAACCAGCGTTCTATGGA+AGG 0.565763 8_2:-20430342 Msa1239190:CDS
GTGTCCTAAAGAGGGGATGG+TGG 0.566785 8_2:+20433856 None:intergenic
CAACAGGTGCTGCCACTCAA+AGG 0.567707 8_2:-20431257 Msa1239190:CDS
GGGTAAGGATAAGCATGAGA+TGG 0.567738 8_2:+20435946 None:intergenic
TGGGAGAAATGTGGTGACCC+AGG 0.571139 8_2:-20429153 Msa1239190:three_prime_UTR
GATGTGGGAGGAAAGATAGT+AGG 0.571855 8_2:-20429608 Msa1239190:CDS
GTCCTAAAGAGGGGATGGTG+GGG 0.571946 8_2:+20433858 None:intergenic
TGGATATAGGATGTCACTAT+GGG 0.572239 8_2:-20429837 Msa1239190:CDS
TTCTGTCAAGGGATTTCCGA+AGG 0.572502 8_2:-20432883 Msa1239190:CDS
AAGGAATGTGAAGAATTTGG+TGG 0.573044 8_2:+20436012 None:intergenic
TTACATTCAGGATGGTGTCA+TGG 0.573090 8_2:-20434425 Msa1239190:intron
TGCGAGGACAAAGTAACACT+TGG 0.573966 8_2:+20434356 None:intergenic
TGAGGGTAAGCAGAACTAAG+AGG 0.574302 8_2:+20435769 None:intergenic
GAGCCTCGACTGTGTGAGAA+GGG 0.574653 8_2:-20429771 Msa1239190:CDS
CATACACACAGCGTATGTAA+AGG 0.575473 8_2:-20432685 Msa1239190:CDS
TAATACTGGTGGTTGTCCAC+GGG 0.576294 8_2:-20433267 Msa1239190:CDS
ACCTGTGGAGTATTCGGAGG+GGG 0.576650 8_2:+20430868 None:intergenic
CTAATGTCATGCTTGATCAT+GGG 0.578880 8_2:-20434880 Msa1239190:CDS
GATGGTGGGGAGTATCATAT+CGG 0.579406 8_2:+20433871 None:intergenic
CAAGAAGAGTTTCCTGATGT+GGG 0.579713 8_2:-20429623 Msa1239190:CDS
TCCCGGTTCAAATGATGACT+CGG 0.582675 8_2:-20435557 Msa1239190:CDS
CACTAGGAGCATCAGATACA+CGG 0.584785 8_2:+20433078 None:intergenic
GATGTACGAGACAGTTTACA+AGG 0.587050 8_2:-20431010 Msa1239190:CDS
TTTGAACCATCATTGATTGG+AGG 0.588603 8_2:+20435910 None:intergenic
TTCCCTGGACCTCGCTAAGG+CGG 0.590283 8_2:+20429474 None:intergenic
CTTGTGTTCATATGCAACAA+AGG 0.591222 8_2:-20436254 Msa1239190:five_prime_UTR
GCAGTGTCCTAAAGAGGGGA+TGG 0.591611 8_2:+20433853 None:intergenic
CTCAAATAAACACACGGAGT+GGG 0.592494 8_2:-20429172 Msa1239190:three_prime_UTR
TAAGGAGCAGATACTGGTGG+AGG 0.594194 8_2:+20436051 None:intergenic
TGTTGGACCTGGTAAGGCAT+CGG 0.595065 8_2:-20434738 Msa1239190:CDS
GGGTAAGGAGAACTATGAGG+AGG 0.596096 8_2:+20435829 None:intergenic
GGGTAAGGAGAACTATGAGG+AGG 0.596096 8_2:+20435886 None:intergenic
TTGTTCCTTCCATAGAACGC+TGG 0.598034 8_2:+20430337 None:intergenic
TTTGTACATATATACATGAA+AGG 0.598731 8_2:+20429081 None:intergenic
AGCGTTCTATGGAAGGAACA+AGG 0.599119 8_2:-20430335 Msa1239190:CDS
TTAGAATGCAAGTCGTGCCA+CGG 0.599340 8_2:+20433242 None:intergenic
GTGTTTATTTGAGTAGGTGT+TGG 0.599603 8_2:+20429182 None:intergenic
GTGGTTGTCCACGGGAACCG+TGG 0.601120 8_2:-20433259 Msa1239190:CDS
TGTCTGCAGTGTCCTAAAGA+GGG 0.601121 8_2:+20433848 None:intergenic
TTGAACCATCACTAATTGGA+GGG 0.602933 8_2:+20435854 None:intergenic
TCATAAGATCATTCAAATGA+GGG 0.604215 8_2:+20435752 None:intergenic
TATGTTTCATAAGACTTTAG+GGG 0.604232 8_2:-20435416 Msa1239190:CDS
CTAATTGGAGGGTATTGGTG+AGG 0.607381 8_2:+20435865 None:intergenic
ACGATGTGACAGAGATGAGA+GGG 0.609284 8_2:-20429706 Msa1239190:CDS
AAGGGACACTGAGATTGCAA+TGG 0.610636 8_2:-20430316 Msa1239190:CDS
GTTATTCCAATGTGGCCAGA+GGG 0.610992 8_2:-20431285 Msa1239190:CDS
TTTGAACCATCACTAATTGG+AGG 0.611046 8_2:+20435853 None:intergenic
CAATACCCTCCAATTAGTGA+TGG 0.611477 8_2:-20435859 Msa1239190:CDS
GTGATGATAATCCTGCAGCT+TGG 0.615264 8_2:-20433052 Msa1239190:CDS
AAGTCGTGCCACGGTTCCCG+TGG 0.615722 8_2:+20433251 None:intergenic
GTAATGTTGTGCAGCACGAA+TGG 0.616013 8_2:+20432662 None:intergenic
CACCTACTCAAATAAACACA+CGG 0.616664 8_2:-20429178 Msa1239190:three_prime_UTR
ATAACCAAGAATGCTTCTTG+AGG 0.616998 8_2:+20434637 None:intergenic
TCAGGAAACTCTTCTTGACC+AGG 0.617302 8_2:+20429629 None:intergenic
ATACCTGTGGAGTATTCGGA+GGG 0.617793 8_2:+20430866 None:intergenic
GAACATAAATCATGAACCGT+CGG 0.624586 8_2:+20430418 None:intergenic
CATACCTGTGGAGTATTCGG+AGG 0.626589 8_2:+20430865 None:intergenic
CCAAAATAGAATCCTTTGAG+TGG 0.627163 8_2:+20431245 None:intergenic
TAATTGGAGGGTATTGGTGA+GGG 0.628043 8_2:+20435866 None:intergenic
GTAACACTCAAAACAGCACC+TGG 0.629220 8_2:+20435058 None:intergenic
AGATTGAGGGAACAGTGACT+AGG 0.630110 8_2:-20435357 Msa1239190:CDS
TAACTGGAGGGTATTGGTGA+GGG 0.630157 8_2:+20435809 None:intergenic
AGTTATTCCAATGTGGCCAG+AGG 0.630514 8_2:-20431286 Msa1239190:CDS
CAATACCCTCCAGTTAGTGA+TGG 0.633274 8_2:-20435802 Msa1239190:CDS
TAAGAGCTGCGAAACCTACA+GGG 0.634099 8_2:-20433166 Msa1239190:CDS
TGGAGCCAAAATAAGGACAT+CGG 0.635144 8_2:-20432597 Msa1239190:intron
ACTCAAATAAACACACGGAG+TGG 0.635496 8_2:-20429173 Msa1239190:three_prime_UTR
GGTAAGCAGAACTAAGAGGA+GGG 0.636871 8_2:+20435773 None:intergenic
CCGGTCGAACAATTATACTC+AGG 0.636948 8_2:-20435136 Msa1239190:CDS
GTCTGCAGTGTCCTAAAGAG+GGG 0.637553 8_2:+20433849 None:intergenic
CTAACTGGAGGGTATTGGTG+AGG 0.637608 8_2:+20435808 None:intergenic
GGTGCATATGGATCATGAGA+TGG 0.637719 8_2:+20436072 None:intergenic
GTTAAGGATAGTGATGTGGT+AGG 0.641479 8_2:-20435187 Msa1239190:CDS
GAACCCTTCTCACACAGTCG+AGG 0.642720 8_2:+20429768 None:intergenic
TTCCGCCTTAGCGAGGTCCA+GGG 0.643087 8_2:-20429476 Msa1239190:three_prime_UTR
ACCGAGTCATCATTTGAACC+GGG 0.643148 8_2:+20435556 None:intergenic
GGAATCTTAAGTTCGAACCT+GGG 0.645159 8_2:+20429136 None:intergenic
GGGTAAGCAGAACTAAGAGG+AGG 0.645857 8_2:+20435772 None:intergenic
AACGATGTGACAGAGATGAG+AGG 0.649672 8_2:-20429707 Msa1239190:CDS
GGATTATCATCACAAACACT+AGG 0.653888 8_2:+20433062 None:intergenic
CACACGGAGTGGGAGAAATG+TGG 0.653927 8_2:-20429162 Msa1239190:three_prime_UTR
ACATTACAGGGTGGTCCGTG+TGG 0.656306 8_2:-20434787 Msa1239190:CDS
AGGTTGTTAAGGGACGCTGT+TGG 0.657123 8_2:-20434755 Msa1239190:CDS
GGCGGAAGCACTATAGCACT+AGG 0.658426 8_2:+20429492 None:intergenic
TTAGAACCATCACTAACTGG+AGG 0.658719 8_2:+20435796 None:intergenic
GGGTTTGGATATCCATAAGG+AGG 0.659972 8_2:+20436132 None:intergenic
GGTTGAAGTTGGGCTCGAAG+CGG 0.660762 8_2:-20430983 Msa1239190:CDS
AGACCTTAGAAGCTCACCAA+GGG 0.661724 8_2:+20434709 None:intergenic
ATAGTGCTTCCGCCTTAGCG+AGG 0.662077 8_2:-20429483 Msa1239190:three_prime_UTR
GAAGAGTTTCCTGATGTGGG+AGG 0.673312 8_2:-20429620 Msa1239190:CDS
CTAAGGTCTAAGTCTCAGGA+AGG 0.674224 8_2:-20434695 Msa1239190:CDS
CTACCAACCTGAATATACAT+GGG 0.675441 8_2:-20430289 Msa1239190:CDS
TGTTGTTAAGGATAGTGATG+TGG 0.675748 8_2:-20435191 Msa1239190:CDS
GCGTTCTATGGAAGGAACAA+GGG 0.677962 8_2:-20430334 Msa1239190:CDS
ATTATGTTCATGGACAGTGT+TGG 0.680055 8_2:-20434853 Msa1239190:CDS
TAATGGCAGGGTAATACTGG+TGG 0.680608 8_2:-20433278 Msa1239190:intron
TACCTGTGGAGTATTCGGAG+GGG 0.681467 8_2:+20430867 None:intergenic
TAGAACCATCACTAACTGGA+GGG 0.685088 8_2:+20435797 None:intergenic
AAAATGTATACTTGTCCGCG+TGG 0.686234 8_2:+20430249 None:intergenic
TATACATAGTTATTCCAATG+TGG 0.686510 8_2:-20431293 Msa1239190:CDS
TAGACCTTAGAAGCTCACCA+AGG 0.687177 8_2:+20434708 None:intergenic
TGTCATGGCAACGCATGATG+AGG 0.696801 8_2:-20434410 Msa1239190:CDS
CAAATAGTCGAAATAACCGA+CGG 0.698089 8_2:-20430434 Msa1239190:CDS
TGTTCAGTGTCTCAAACATG+TGG 0.700838 8_2:-20429413 Msa1239190:three_prime_UTR
GGATAAGGAGCAGATACTGG+TGG 0.708723 8_2:+20436048 None:intergenic
GTTTGGTTTACATTACAGGG+TGG 0.732011 8_2:-20434796 Msa1239190:CDS
TTTGTTGCATATGAACACAA+GGG 0.740785 8_2:+20436256 None:intergenic
AGAAAACATTCTTATCCACG+CGG 0.794756 8_2:-20430264 Msa1239190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr8_2:20434555-20434574 None:intergenic 0.0%
!! TTAATGTAATTTAAACAAAA+AGG + chr8_2:20430842-20430861 None:intergenic 10.0%
!!! AAAGATTAGAATTATTTTAA+CGG - chr8_2:20433710-20433729 Msa1239190:intron 10.0%
!! AGTCAATTATATATATAAAA+AGG + chr8_2:20435177-20435196 None:intergenic 10.0%
!!! TATATAATTGACTTATTTAA+CGG - chr8_2:20435184-20435203 Msa1239190:CDS 10.0%
!!! TTTACAAATTTGTACAATTT+TGG - chr8_2:20431252-20431271 Msa1239190:CDS 15.0%
!!! ATCAATCATTTTAAATTCTT+TGG - chr8_2:20431895-20431914 Msa1239190:intron 15.0%
!! TATGACTATTTATGTATATA+TGG - chr8_2:20432904-20432923 Msa1239190:CDS 15.0%
!! ATGACTATTTATGTATATAT+GGG - chr8_2:20432905-20432924 Msa1239190:CDS 15.0%
!!! TATGTTTGAAACTTTAAATT+TGG - chr8_2:20433132-20433151 Msa1239190:CDS 15.0%
!! AAAAATTGAAAAAAAATCCA+GGG + chr8_2:20434246-20434265 None:intergenic 15.0%
!!! GTATACATTTTATAAGTTAT+TGG - chr8_2:20435059-20435078 Msa1239190:CDS 15.0%
!! AATAGAAGAAAAAAAATGAA+AGG + chr8_2:20436084-20436103 None:intergenic 15.0%
!!! TTTCATTTTTTTTCTTCTAT+TGG - chr8_2:20436083-20436102 Msa1239190:CDS 15.0%
!!! AATTTTGAGTTTTTGATTCA+TGG - chr8_2:20429124-20429143 Msa1239190:three_prime_UTR 20.0%
!! TTATGAAACATATCCATATT+TGG + chr8_2:20429872-20429891 None:intergenic 20.0%
!! ATATGTTTCATAAGACTTTA+GGG - chr8_2:20429879-20429898 Msa1239190:intron 20.0%
!! TTAAAATTCATAAATCATGC+CGG + chr8_2:20430746-20430765 None:intergenic 20.0%
!! ATTCCTCTTTATATTCTAAT+CGG - chr8_2:20431043-20431062 Msa1239190:intron 20.0%
!! GAATTAGAAGAAATTTAATG+CGG + chr8_2:20431288-20431307 None:intergenic 20.0%
!! TTAAATTTCTTCTAATTCTC+AGG - chr8_2:20431290-20431309 Msa1239190:CDS 20.0%
!! TTTAAAAAATTGAAACCTGT+TGG + chr8_2:20431949-20431968 None:intergenic 20.0%
!!! ATCAATTTATTCTGATAATG+CGG - chr8_2:20431989-20432008 Msa1239190:intron 20.0%
!! ATAGAGAATCAATATTTCAT+CGG - chr8_2:20432663-20432682 Msa1239190:CDS 20.0%
!! CTAGGAAATTATATATAGTA+CGG - chr8_2:20432858-20432877 Msa1239190:intron 20.0%
!! GAAACTTTAAATTGAGTTAA+AGG + chr8_2:20432982-20433001 None:intergenic 20.0%
!! GTTGATGTATATAAACATAA+AGG + chr8_2:20433067-20433086 None:intergenic 20.0%
!!! TTTTTCTTGACTATTCAAAA+AGG - chr8_2:20433193-20433212 Msa1239190:CDS 20.0%
!! AACATTTAAATCACATCAAA+AGG - chr8_2:20433279-20433298 Msa1239190:intron 20.0%
!! ATGACATGAAAAAAAGATAA+AGG - chr8_2:20433517-20433536 Msa1239190:intron 20.0%
!!! AAACTTTGAGTTAAGTTAAA+AGG - chr8_2:20433549-20433568 Msa1239190:intron 20.0%
!! TGCTAATAATTTAATTCCAA+TGG - chr8_2:20433929-20433948 Msa1239190:CDS 20.0%
!! GAAAAATTGAAAAAAAATCC+AGG + chr8_2:20434247-20434266 None:intergenic 20.0%
!! AAAAAGTTCAAATAATCTTG+TGG + chr8_2:20434347-20434366 None:intergenic 20.0%
!! TAAAAACTAAACTCATCAAA+TGG + chr8_2:20435743-20435762 None:intergenic 20.0%
!!! TTTAGTTTTTACATTCACAT+TGG - chr8_2:20435752-20435771 Msa1239190:CDS 20.0%
!! TTTGTACATATATACATGAA+AGG + chr8_2:20436218-20436237 None:intergenic 20.0%
!! TACAAACTACTTATTTCATT+TGG - chr8_2:20436232-20436251 Msa1239190:five_prime_UTR 20.0%
!! TTTCACAAAAAAAAAATGTC+CGG + chr8_2:20436268-20436287 None:intergenic 20.0%
!!! AATTGATTCAATGATAAGTT+TGG - chr8_2:20436299-20436318 Msa1239190:five_prime_UTR 20.0%
! TTTGTTACATATGCACAAAA+GGG + chr8_2:20428991-20429010 None:intergenic 25.0%
!!! TTTTGATTCATGGATAATCA+TGG - chr8_2:20429134-20429153 Msa1239190:three_prime_UTR 25.0%
! TCATAAGATCATTCAAATGA+GGG + chr8_2:20429547-20429566 None:intergenic 25.0%
!! CTCTTCATTTAAAACTGAAT+AGG + chr8_2:20429621-20429640 None:intergenic 25.0%
! TTTAAATGAAGAGAAGAAAG+AGG - chr8_2:20429628-20429647 Msa1239190:CDS 25.0%
!! TCTAGTAGTAATTCTTTTTC+AGG - chr8_2:20429665-20429684 Msa1239190:CDS 25.0%
! GATATGTTTCATAAGACTTT+AGG - chr8_2:20429878-20429897 Msa1239190:intron 25.0%
! TATGTTTCATAAGACTTTAG+GGG - chr8_2:20429880-20429899 Msa1239190:intron 25.0%
! TAATGTGAGTAATAAGATTG+AGG - chr8_2:20429925-20429944 Msa1239190:intron 25.0%
! AATGTGAGTAATAAGATTGA+GGG - chr8_2:20429926-20429945 Msa1239190:intron 25.0%
! AATAAAGAAATGGACACATA+AGG + chr8_2:20429980-20429999 None:intergenic 25.0%
! TACAGCATTCAATAAAGAAA+TGG + chr8_2:20429990-20430009 None:intergenic 25.0%
! TAAATGATCAGTTTCTCTAT+TGG + chr8_2:20430277-20430296 None:intergenic 25.0%
! AAACTGATCATTTATCATCA+AGG - chr8_2:20430283-20430302 Msa1239190:CDS 25.0%
! TTACATTTGATTATGTGATG+TGG - chr8_2:20430712-20430731 Msa1239190:intron 25.0%
! TAAACATCTGATTTACATTC+AGG - chr8_2:20430859-20430878 Msa1239190:intron 25.0%
! ATTCCTCTTTATATTCGAAT+TGG - chr8_2:20431092-20431111 Msa1239190:intron 25.0%
! GAATGTTAGAATTTGTGATA+AGG - chr8_2:20431204-20431223 Msa1239190:intron 25.0%
! AGAAAAATTGTAGCATTTGT+TGG - chr8_2:20431381-20431400 Msa1239190:intron 25.0%
! TGATGTTCATGTAATCAAAT+GGG + chr8_2:20431531-20431550 None:intergenic 25.0%
! ATTTGAATTCTACTGAAACT+TGG + chr8_2:20431620-20431639 None:intergenic 25.0%
! TATATAAGACTTACATATCG+TGG + chr8_2:20431762-20431781 None:intergenic 25.0%
!! ATTTTAAATTCTTTGGCGTT+TGG - chr8_2:20431902-20431921 Msa1239190:intron 25.0%
! AACTCTAAATATCTAGTATC+CGG + chr8_2:20432297-20432316 None:intergenic 25.0%
! TTCTCATTTACACTACTTAA+AGG - chr8_2:20432335-20432354 Msa1239190:intron 25.0%
!! ATTATTGATTGTGTATACCA+TGG - chr8_2:20432360-20432379 Msa1239190:intron 25.0%
!! AATTGATTCAAATTCTGTCA+AGG - chr8_2:20432401-20432420 Msa1239190:intron 25.0%
!! ATTGATTCAAATTCTGTCAA+GGG - chr8_2:20432402-20432421 Msa1239190:intron 25.0%
! AGTTTGGAGATAAATTAACA+GGG - chr8_2:20432771-20432790 Msa1239190:intron 25.0%
! AAACTCTCCATAAATTAACA+CGG + chr8_2:20432813-20432832 None:intergenic 25.0%
! TATACATAAATAGTCATAGC+TGG + chr8_2:20432902-20432921 None:intergenic 25.0%
!! TTTCTATGCTCTTTTTCTTT+TGG - chr8_2:20432939-20432958 Msa1239190:intron 25.0%
! CAATTCATCAAGATAACATA+AGG - chr8_2:20433229-20433248 Msa1239190:CDS 25.0%
! AAAAGTCATGTTAACTTTGA+TGG + chr8_2:20433323-20433342 None:intergenic 25.0%
! AAAGAAAAGCAAAACTACAT+TGG + chr8_2:20433579-20433598 None:intergenic 25.0%
!! CTTTTCTTTTCCTTTGATAA+AGG - chr8_2:20433590-20433609 Msa1239190:intron 25.0%
!!! TAAAACTTTCATGTTTTTGC+AGG - chr8_2:20433906-20433925 Msa1239190:CDS 25.0%
! TATACATAGTTATTCCAATG+TGG - chr8_2:20434003-20434022 Msa1239190:intron 25.0%
! AAATCTTAATTTACTACACG+TGG + chr8_2:20434137-20434156 None:intergenic 25.0%
! TACAAGAATTAAGCAATCAT+AGG + chr8_2:20434211-20434230 None:intergenic 25.0%
!!! TATTTGAACTTTTTCTGTCT+TGG - chr8_2:20434353-20434372 Msa1239190:CDS 25.0%
! AATATTCTCATGCATATCTA+TGG + chr8_2:20434390-20434409 None:intergenic 25.0%
!! TTACATTTTTCTGTTGCTAT+AGG - chr8_2:20434492-20434511 Msa1239190:intron 25.0%
!! TACATTTTTCTGTTGCTATA+GGG - chr8_2:20434493-20434512 Msa1239190:intron 25.0%
!! ATTTTCCATTATGAACTCAT+AGG + chr8_2:20434717-20434736 None:intergenic 25.0%
!!! TGCTTCTAGAATATATACTT+AGG - chr8_2:20434738-20434757 Msa1239190:CDS 25.0%
! AAGAATTAAGACACTTTGAT+AGG + chr8_2:20434767-20434786 None:intergenic 25.0%
!!! AGCCTTTGAATAATTTGTTT+TGG - chr8_2:20434790-20434809 Msa1239190:CDS 25.0%
! CTCCAAAACAAATTATTCAA+AGG + chr8_2:20434795-20434814 None:intergenic 25.0%
!!! AATGCGATTGATTTTTATGT+TGG - chr8_2:20434824-20434843 Msa1239190:CDS 25.0%
! ATGATTTATGTTCATTCGAA+AGG - chr8_2:20434888-20434907 Msa1239190:CDS 25.0%
! GATGATGAATATGTGATAAT+TGG - chr8_2:20434921-20434940 Msa1239190:CDS 25.0%
!! TTTGAAATAGAAAAGCTGAA+TGG - chr8_2:20435101-20435120 Msa1239190:CDS 25.0%
! GTTTATCAAGCAAAATATAG+TGG - chr8_2:20435334-20435353 Msa1239190:CDS 25.0%
! AAATTGTTTCCAGTTCATTT+CGG + chr8_2:20435563-20435582 None:intergenic 25.0%
! AAAATGAAAGGAAGAAAAGT+AGG + chr8_2:20436072-20436091 None:intergenic 25.0%
CTTTGTTACATATGCACAAA+AGG + chr8_2:20428992-20429011 None:intergenic 30.0%
TTTGTTGCATATGAACACAA+GGG + chr8_2:20429043-20429062 None:intergenic 30.0%
GGATATGATTCATTTGGATA+AGG + chr8_2:20429266-20429285 None:intergenic 30.0%
! TTTGGTGGATATGATTCATT+TGG + chr8_2:20429272-20429291 None:intergenic 30.0%
TAGAAGGAATGTGAAGAATT+TGG + chr8_2:20429290-20429309 None:intergenic 30.0%
CTCATAAGATCATTCAAATG+AGG + chr8_2:20429548-20429567 None:intergenic 30.0%
ATGTTCAGATATCTGATAAC+AGG - chr8_2:20429570-20429589 Msa1239190:exon 30.0%
TTGAAATATTTGCTCTTGCA+TGG - chr8_2:20429809-20429828 Msa1239190:CDS 30.0%
TGCTAAGAATCTTCCAAATA+TGG - chr8_2:20429856-20429875 Msa1239190:intron 30.0%
ATCTTATTACTCACATTACC+AGG + chr8_2:20429923-20429942 None:intergenic 30.0%
TCTTTATTGAATGCTGTAGT+TGG - chr8_2:20429992-20430011 Msa1239190:intron 30.0%
!!! TGAAGTGCATTTTGTTGTTA+AGG - chr8_2:20430093-20430112 Msa1239190:intron 30.0%
! TTCCATTGCTATTAAGGATA+GGG + chr8_2:20430207-20430226 None:intergenic 30.0%
! TTTCCATTGCTATTAAGGAT+AGG + chr8_2:20430208-20430227 None:intergenic 30.0%
ATCATTTATCATCAAGGAGT+TGG - chr8_2:20430289-20430308 Msa1239190:CDS 30.0%
! ACATATTTTCCATTGAGGAA+AGG - chr8_2:20430343-20430362 Msa1239190:CDS 30.0%
TTGATTAAGACTCTTGAACA+TGG - chr8_2:20430774-20430793 Msa1239190:intron 30.0%
! ACACCGATTAGAATATAAAG+AGG + chr8_2:20431049-20431068 None:intergenic 30.0%
ACACCAATTCGAATATAAAG+AGG + chr8_2:20431098-20431117 None:intergenic 30.0%
!! TGCACATATTAGTGTTGATT+CGG - chr8_2:20431145-20431164 Msa1239190:intron 30.0%
! AAAATTGTAGCATTTGTTGG+AGG - chr8_2:20431384-20431403 Msa1239190:intron 30.0%
! AAATTGTAGCATTTGTTGGA+GGG - chr8_2:20431385-20431404 Msa1239190:intron 30.0%
AAGATATTACCGTGAAAGTA+GGG + chr8_2:20431497-20431516 None:intergenic 30.0%
TAAGATATTACCGTGAAAGT+AGG + chr8_2:20431498-20431517 None:intergenic 30.0%
ATGTTCATGTAATCAAATGG+GGG + chr8_2:20431529-20431548 None:intergenic 30.0%
GATGTTCATGTAATCAAATG+GGG + chr8_2:20431530-20431549 None:intergenic 30.0%
GTGATGTTCATGTAATCAAA+TGG + chr8_2:20431532-20431551 None:intergenic 30.0%
! TTTCACAGTACATGTTTTCT+AGG - chr8_2:20431691-20431710 Msa1239190:intron 30.0%
TAATGTAGTTGTTAACTAGC+TGG - chr8_2:20431782-20431801 Msa1239190:intron 30.0%
GACATCTCTGATATATTTGT+AGG + chr8_2:20431859-20431878 None:intergenic 30.0%
!! GACTTGCATTCTAAAATTGA+CGG - chr8_2:20432063-20432082 Msa1239190:intron 30.0%
!!! TGATGTTTTGACAAACTTTG+AGG - chr8_2:20432098-20432117 Msa1239190:intron 30.0%
!!! TTCAACTTTTTTATCCCTGT+AGG + chr8_2:20432147-20432166 None:intergenic 30.0%
GGTATTTAGTCAATTAGTAC+CGG - chr8_2:20432275-20432294 Msa1239190:intron 30.0%
! TTTTTACAGAACCTTGTATG+TGG - chr8_2:20432564-20432583 Msa1239190:intron 30.0%
! TTTTACAGAACCTTGTATGT+GGG - chr8_2:20432565-20432584 Msa1239190:intron 30.0%
ATACAATTGGAGCCAAAATA+AGG - chr8_2:20432692-20432711 Msa1239190:CDS 30.0%
GAGTTTGGAGATAAATTAAC+AGG - chr8_2:20432770-20432789 Msa1239190:intron 30.0%
! TTTTGTGCCGTGTTAATTTA+TGG - chr8_2:20432803-20432822 Msa1239190:intron 30.0%
!!! ATTTTACCACTTAACTTGTG+TGG - chr8_2:20432835-20432854 Msa1239190:intron 30.0%
TCTAACTTGAAACGAGAAAA+AGG - chr8_2:20433102-20433121 Msa1239190:CDS 30.0%
TTGAAACGAGAAAAAGGTAA+AGG - chr8_2:20433108-20433127 Msa1239190:CDS 30.0%
CATAGCTGAATAATGAAGTT+TGG + chr8_2:20433159-20433178 None:intergenic 30.0%
! AGTCTAATTGTGTTGTTGAA+TGG - chr8_2:20433377-20433396 Msa1239190:intron 30.0%
ACTGAACTAAGAATGATAGT+TGG - chr8_2:20433456-20433475 Msa1239190:intron 30.0%
! AAGAATGATAGTTGGTTCAA+TGG - chr8_2:20433464-20433483 Msa1239190:intron 30.0%
CTTAACTCAAAGTTTCTAAC+AGG + chr8_2:20433544-20433563 None:intergenic 30.0%
!!! ATTATTTTAACGGTCTCTAG+AGG - chr8_2:20433720-20433739 Msa1239190:intron 30.0%
TAAAGAGTTGGATGGAAATA+TGG - chr8_2:20433797-20433816 Msa1239190:intron 30.0%
! CATGAGAATATTTCTGTATC+TGG - chr8_2:20434398-20434417 Msa1239190:CDS 30.0%
AGCAACAGAAAAATGTAACT+GGG + chr8_2:20434490-20434509 None:intergenic 30.0%
TAGCAACAGAAAAATGTAAC+TGG + chr8_2:20434491-20434510 None:intergenic 30.0%
!!! TATGTTGGTGATTTTTTACC+AGG - chr8_2:20434839-20434858 Msa1239190:CDS 30.0%
! TCTAATTTTCACCCACTATT+CGG - chr8_2:20435138-20435157 Msa1239190:CDS 30.0%
AATGGTTAGATTCTCTTGAA+TGG + chr8_2:20435725-20435744 None:intergenic 30.0%
! AGTTTTTACATTCACATTGG+TGG - chr8_2:20435755-20435774 Msa1239190:CDS 30.0%
! GTATCGACATTTCAGATTAA+AGG - chr8_2:20435858-20435877 Msa1239190:CDS 30.0%
!!! TTTTGAAATGCAATGCATGT+TGG - chr8_2:20436032-20436051 Msa1239190:CDS 30.0%
!!! TTTTTCTTCTATTGGCTTAG+TGG - chr8_2:20436091-20436110 Msa1239190:CDS 30.0%
CTTTGTTGCATATGAACACA+AGG + chr8_2:20429044-20429063 None:intergenic 35.0%
CTTGTGTTCATATGCAACAA+AGG - chr8_2:20429042-20429061 Msa1239190:three_prime_UTR 35.0%
TAAGGGTTTGGATATCCATA+AGG + chr8_2:20429170-20429189 None:intergenic 35.0%
GATATGGAGGATATGCATAA+GGG + chr8_2:20429187-20429206 None:intergenic 35.0%
! TATGGATCATGAGATGGATT+TGG + chr8_2:20429221-20429240 None:intergenic 35.0%
AAGGAATGTGAAGAATTTGG+TGG + chr8_2:20429287-20429306 None:intergenic 35.0%
!! CTAAAGGTTTTGGTGGATAA+GGG + chr8_2:20429313-20429332 None:intergenic 35.0%
!! TCTAAAGGTTTTGGTGGATA+AGG + chr8_2:20429314-20429333 None:intergenic 35.0%
!! GTAGGAAACTCTAAAGGTTT+TGG + chr8_2:20429323-20429342 None:intergenic 35.0%
TGAGAAGTAGGAAACTCTAA+AGG + chr8_2:20429329-20429348 None:intergenic 35.0%
! TTGAACCATCATTGATTGGA+GGG + chr8_2:20429388-20429407 None:intergenic 35.0%
! TTTGAACCATCATTGATTGG+AGG + chr8_2:20429389-20429408 None:intergenic 35.0%
TTGAACCATCACTAATTGGA+GGG + chr8_2:20429445-20429464 None:intergenic 35.0%
TTTGAACCATCACTAATTGG+AGG + chr8_2:20429446-20429465 None:intergenic 35.0%
! GAATAGGAATGTGTCATTAC+TGG + chr8_2:20429605-20429624 None:intergenic 35.0%
! GAGAAGAAAGAGGAGTTTTA+TGG - chr8_2:20429638-20429657 Msa1239190:CDS 35.0%
CAAAATGTTTCAGCTTATCC+CGG - chr8_2:20429722-20429741 Msa1239190:CDS 35.0%
ATTGTTCCAGCTCAGTATAA+AGG - chr8_2:20429782-20429801 Msa1239190:CDS 35.0%
TTGTTCCAGCTCAGTATAAA+GGG - chr8_2:20429783-20429802 Msa1239190:CDS 35.0%
GATGTGTTTGGTAAATTTCC+TGG - chr8_2:20429902-20429921 Msa1239190:intron 35.0%
TATTGAATGCTGTAGTTGGT+AGG - chr8_2:20429996-20430015 Msa1239190:intron 35.0%
CAATAGCGAAAATCCTGTTT+GGG - chr8_2:20430033-20430052 Msa1239190:intron 35.0%
TGTTGTTAAGGATAGTGATG+TGG - chr8_2:20430105-20430124 Msa1239190:intron 35.0%
! TACTCAGGTGAAAAAGTACA+AGG - chr8_2:20430175-20430194 Msa1239190:intron 35.0%
! ACTCAGGTGAAAAAGTACAA+GGG - chr8_2:20430176-20430195 Msa1239190:intron 35.0%
TACCCTATCCTTAATAGCAA+TGG - chr8_2:20430202-20430221 Msa1239190:intron 35.0%
! AAGGCTTTCCATTGCTATTA+AGG + chr8_2:20430213-20430232 None:intergenic 35.0%
TGATCAGTTTCTCTATTGGT+AGG + chr8_2:20430273-20430292 None:intergenic 35.0%
CTCAATGGAAAATATGTTCC+CGG + chr8_2:20430340-20430359 None:intergenic 35.0%
! TATTTTCCATTGAGGAAAGG+TGG - chr8_2:20430346-20430365 Msa1239190:CDS 35.0%
CATGATCAAGCATGACATTA+GGG + chr8_2:20430417-20430436 None:intergenic 35.0%
CTAATGTCATGCTTGATCAT+GGG - chr8_2:20430416-20430435 Msa1239190:CDS 35.0%
ATTATGTTCATGGACAGTGT+TGG - chr8_2:20430443-20430462 Msa1239190:intron 35.0%
! AAGCGTTTGGTTTACATTAC+AGG - chr8_2:20430496-20430515 Msa1239190:intron 35.0%
! AGCGTTTGGTTTACATTACA+GGG - chr8_2:20430497-20430516 Msa1239190:intron 35.0%
! GCACAAAGTTAGGTTGTTAA+GGG - chr8_2:20430531-20430550 Msa1239190:intron 35.0%
ATAACCAAGAATGCTTCTTG+AGG + chr8_2:20430662-20430681 None:intergenic 35.0%
!!! ATGTGATGTGGTACTTTTTC+CGG - chr8_2:20430724-20430743 Msa1239190:intron 35.0%
CATCTGATTTACATTCAGGA+TGG - chr8_2:20430863-20430882 Msa1239190:intron 35.0%
! TAAGGTTCAGTTTTGCTACT+TGG - chr8_2:20431222-20431241 Msa1239190:intron 35.0%
TCTTCTAATTCTCAGGAAGT+TGG - chr8_2:20431297-20431316 Msa1239190:CDS 35.0%
! TGATAATGCGGACTACTTAA+TGG - chr8_2:20432001-20432020 Msa1239190:intron 35.0%
GCTCAAGATAGAAAGAATTC+CGG - chr8_2:20432188-20432207 Msa1239190:intron 35.0%
GGATTATCATCACAAACACT+AGG + chr8_2:20432237-20432256 None:intergenic 35.0%
AACGAAATATCTGCATTCCA+TGG + chr8_2:20432380-20432399 None:intergenic 35.0%
ACCTTTATTGATCCATCTCT+TGG + chr8_2:20432441-20432460 None:intergenic 35.0%
GATGGATCAATAAAGGTGAA+CGG - chr8_2:20432444-20432463 Msa1239190:intron 35.0%
ATGGATCAATAAAGGTGAAC+GGG - chr8_2:20432445-20432464 Msa1239190:intron 35.0%
!! TCATCGGTTCTTCATACAAT+TGG - chr8_2:20432679-20432698 Msa1239190:CDS 35.0%
TTGACACGAGAAAAAGGTAA+AGG + chr8_2:20433013-20433032 None:intergenic 35.0%
TCTAACTTGACACGAGAAAA+AGG + chr8_2:20433019-20433038 None:intergenic 35.0%
! CTAATTGTGTTGTTGAATGG+TGG - chr8_2:20433380-20433399 Msa1239190:intron 35.0%
AATCTTTGTCCTCACTTAGT+AGG + chr8_2:20433697-20433716 None:intergenic 35.0%
AGACCTAGAGATTAAAGAGT+TGG - chr8_2:20433785-20433804 Msa1239190:intron 35.0%
CATCCAACTCTTTAATCTCT+AGG + chr8_2:20433791-20433810 None:intergenic 35.0%
CTAGAGATTAAAGAGTTGGA+TGG - chr8_2:20433789-20433808 Msa1239190:intron 35.0%
ATCTTTAGCGCAATTTCCAT+TGG + chr8_2:20433948-20433967 None:intergenic 35.0%
CCAAAATAGAATCCTTTGAG+TGG + chr8_2:20434054-20434073 None:intergenic 35.0%
! CCACTCAAAGGATTCTATTT+TGG - chr8_2:20434051-20434070 Msa1239190:intron 35.0%
!!! TCAAAGGATTCTATTTTGGC+AGG - chr8_2:20434055-20434074 Msa1239190:intron 35.0%
TTGTATTGCATTTCTTACCC+TGG - chr8_2:20434226-20434245 Msa1239190:intron 35.0%
GTAAGCGTATTCCTGTAAAA+CGG - chr8_2:20434524-20434543 Msa1239190:intron 35.0%
AGTGGATGTATCTAGTGATA+CGG - chr8_2:20434606-20434625 Msa1239190:intron 35.0%
TGATCATTGTTGAAGAGTGA+TGG - chr8_2:20434689-20434708 Msa1239190:CDS 35.0%
TGGAACCTATGAGTTCATAA+TGG - chr8_2:20434709-20434728 Msa1239190:CDS 35.0%
CAAATAGTCGAAATAACCGA+CGG - chr8_2:20434862-20434881 Msa1239190:CDS 35.0%
GAACATAAATCATGAACCGT+CGG + chr8_2:20434881-20434900 None:intergenic 35.0%
CTACCAACCTGAATATACAT+GGG - chr8_2:20435007-20435026 Msa1239190:CDS 35.0%
TTTCTTGCCCATGTATATTC+AGG + chr8_2:20435017-20435036 None:intergenic 35.0%
AGAAAACATTCTTATCCACG+CGG - chr8_2:20435032-20435051 Msa1239190:CDS 35.0%
!! AGTGGATTGCGGAAAATATA+GGG + chr8_2:20435264-20435283 None:intergenic 35.0%
!! TAGTGGATTGCGGAAAATAT+AGG + chr8_2:20435265-20435284 None:intergenic 35.0%
!! GTGTAATCAATAGTGGATTG+CGG + chr8_2:20435275-20435294 None:intergenic 35.0%
GACAACAGTGTAATCAATAG+TGG + chr8_2:20435282-20435301 None:intergenic 35.0%
!!! GTTTTCTGAAACTCCTATGT+AGG - chr8_2:20435432-20435451 Msa1239190:CDS 35.0%
CTATATCCATGAACCTACAT+AGG + chr8_2:20435448-20435467 None:intergenic 35.0%
CTATGTAGGTTCATGGATAT+AGG - chr8_2:20435446-20435465 Msa1239190:CDS 35.0%
ATGGATATAGGATGTCACTA+TGG - chr8_2:20435458-20435477 Msa1239190:CDS 35.0%
TGGATATAGGATGTCACTAT+GGG - chr8_2:20435459-20435478 Msa1239190:CDS 35.0%
CCTTTCTATCAACTTCTACA+GGG + chr8_2:20435630-20435649 None:intergenic 35.0%
!! CCTGTAGAAGTTGATAGAAA+GGG - chr8_2:20435628-20435647 Msa1239190:CDS 35.0%
!! AGAAGTTGATAGAAAGGGTA+AGG - chr8_2:20435633-20435652 Msa1239190:CDS 35.0%
! ACATTGGTGGTCATTAGAAT+AGG - chr8_2:20435768-20435787 Msa1239190:CDS 35.0%
! CATTGGTGGTCATTAGAATA+GGG - chr8_2:20435769-20435788 Msa1239190:CDS 35.0%
TGTATGTGTTTGTGCTTCAT+AGG - chr8_2:20435953-20435972 Msa1239190:CDS 35.0%
GTATGTGTTTGTGCTTCATA+GGG - chr8_2:20435954-20435973 Msa1239190:CDS 35.0%
AAAGGAAGAAAAGTAGGTGT+TGG + chr8_2:20436066-20436085 None:intergenic 35.0%
GTGTTTATTTGAGTAGGTGT+TGG + chr8_2:20436117-20436136 None:intergenic 35.0%
CACCTACTCAAATAAACACA+CGG - chr8_2:20436118-20436137 Msa1239190:CDS 35.0%
ATTCCACATAAAATGTGTGC+AGG - chr8_2:20436178-20436197 Msa1239190:five_prime_UTR 35.0%
CACAAAAAAAAAATGTCCGG+CGG + chr8_2:20436265-20436284 None:intergenic 35.0%
GGATATGGAGGATATGCATA+AGG + chr8_2:20429188-20429207 None:intergenic 40.0%
TTTGGAGGAGGATATGGATA+TGG + chr8_2:20429203-20429222 None:intergenic 40.0%
TTTGGATAAGGAGCAGATAC+TGG + chr8_2:20429254-20429273 None:intergenic 40.0%
!! TTTTGGTGGATAAGGGTAGA+AGG + chr8_2:20429306-20429325 None:intergenic 40.0%
!! GGAAACTCTAAAGGTTTTGG+TGG + chr8_2:20429320-20429339 None:intergenic 40.0%
!! TTGGAGGGTATTGTTGGTAA+GGG + chr8_2:20429373-20429392 None:intergenic 40.0%
!! ATTGGAGGGTATTGTTGGTA+AGG + chr8_2:20429374-20429393 None:intergenic 40.0%
!! CATTGATTGGAGGGTATTGT+TGG + chr8_2:20429379-20429398 None:intergenic 40.0%
CAATACCCTCCAATCAATGA+TGG - chr8_2:20429380-20429399 Msa1239190:three_prime_UTR 40.0%
GGGTTTGAACCATCATTGAT+TGG + chr8_2:20429392-20429411 None:intergenic 40.0%
!! TAATTGGAGGGTATTGGTGA+GGG + chr8_2:20429433-20429452 None:intergenic 40.0%
! CATCACTAATTGGAGGGTAT+TGG + chr8_2:20429439-20429458 None:intergenic 40.0%
CAATACCCTCCAATTAGTGA+TGG - chr8_2:20429437-20429456 Msa1239190:three_prime_UTR 40.0%
GGGTTTGAACCATCACTAAT+TGG + chr8_2:20429449-20429468 None:intergenic 40.0%
TAGAACCATCACTAACTGGA+GGG + chr8_2:20429502-20429521 None:intergenic 40.0%
TTAGAACCATCACTAACTGG+AGG + chr8_2:20429503-20429522 None:intergenic 40.0%
GGCTATGAACATTCTTACTC+TGG - chr8_2:20429686-20429705 Msa1239190:CDS 40.0%
TGAACATTCTTACTCTGGTG+TGG - chr8_2:20429691-20429710 Msa1239190:CDS 40.0%
GAACATTCTTACTCTGGTGT+GGG - chr8_2:20429692-20429711 Msa1239190:CDS 40.0%
AACATTCTTACTCTGGTGTG+GGG - chr8_2:20429693-20429712 Msa1239190:CDS 40.0%
AATGACCCTTTATACTGAGC+TGG + chr8_2:20429791-20429810 None:intergenic 40.0%
! AAGACTTTAGGGGATGTGTT+TGG - chr8_2:20429890-20429909 Msa1239190:intron 40.0%
GCAATAGCGAAAATCCTGTT+TGG - chr8_2:20430032-20430051 Msa1239190:intron 40.0%
GTTAAGGATAGTGATGTGGT+AGG - chr8_2:20430109-20430128 Msa1239190:intron 40.0%
!! TATTGGTGTTGTAGCGATTC+CGG - chr8_2:20430141-20430160 Msa1239190:intron 40.0%
CCTGAGTATAATTGTTCGAC+CGG + chr8_2:20430163-20430182 None:intergenic 40.0%
CTCTATTGGTAGGAACTGAA+TGG + chr8_2:20430263-20430282 None:intergenic 40.0%
! CGGGAACATATTTTCCATTG+AGG - chr8_2:20430338-20430357 Msa1239190:CDS 40.0%
CCATGATCAAGCATGACATT+AGG + chr8_2:20430418-20430437 None:intergenic 40.0%
CCTAATGTCATGCTTGATCA+TGG - chr8_2:20430415-20430434 Msa1239190:CDS 40.0%
CATGGGATGCATTATGTTCA+TGG - chr8_2:20430433-20430452 Msa1239190:CDS 40.0%
! GTTTGGTTTACATTACAGGG+TGG - chr8_2:20430500-20430519 Msa1239190:intron 40.0%
! GGCACAAAGTTAGGTTGTTA+AGG - chr8_2:20430530-20430549 Msa1239190:intron 40.0%
!! TGAGAGTGCTTCTTCTTGTT+TGG - chr8_2:20430626-20430645 Msa1239190:intron 40.0%
!! GAGAGTGCTTCTTCTTGTTT+GGG - chr8_2:20430627-20430646 Msa1239190:intron 40.0%
CAAGAATGCTTCTTGAGGTA+GGG + chr8_2:20430657-20430676 None:intergenic 40.0%
! TTACATTCAGGATGGTGTCA+TGG - chr8_2:20430871-20430890 Msa1239190:CDS 40.0%
GTAATTGTAGATGCTGATGC+TGG - chr8_2:20431348-20431367 Msa1239190:CDS 40.0%
GGTTGTGATAGTCATCCTTA+TGG + chr8_2:20431476-20431495 None:intergenic 40.0%
CTATCACAACCCTACTTTCA+CGG - chr8_2:20431485-20431504 Msa1239190:intron 40.0%
!! GTAGGAAAATTTTAGCCGCA+CGG + chr8_2:20431841-20431860 None:intergenic 40.0%
! TTGGTAGCTAGGAAATAGGA+AGG - chr8_2:20431921-20431940 Msa1239190:intron 40.0%
ACTTAATGGCAGGGTAATAC+TGG - chr8_2:20432015-20432034 Msa1239190:intron 40.0%
GTCAAAACATCATAAGCTGC+TGG + chr8_2:20432090-20432109 None:intergenic 40.0%
TCAGATACACGGAGAATATC+CGG + chr8_2:20432210-20432229 None:intergenic 40.0%
GCCAAGAGATGGATCAATAA+AGG - chr8_2:20432437-20432456 Msa1239190:intron 40.0%
ATCAATAAAGGTGAACGGGA+AGG - chr8_2:20432449-20432468 Msa1239190:intron 40.0%
TCAATAAAGGTGAACGGGAA+GGG - chr8_2:20432450-20432469 Msa1239190:intron 40.0%
CACATATGGTGGCTTAAATC+TGG + chr8_2:20432505-20432524 None:intergenic 40.0%
AACACTCGTTGTCACACATA+TGG + chr8_2:20432519-20432538 None:intergenic 40.0%
GTACATTCTTCCCACATACA+AGG + chr8_2:20432578-20432597 None:intergenic 40.0%
CATACACACAGCGTATGTAA+AGG - chr8_2:20432611-20432630 Msa1239190:CDS 40.0%
TGGAGCCAAAATAAGGACAT+CGG - chr8_2:20432699-20432718 Msa1239190:CDS 40.0%
!! CCTTACCGATGTCCTTATTT+TGG + chr8_2:20432707-20432726 None:intergenic 40.0%
CCAAAATAAGGACATCGGTA+AGG - chr8_2:20432704-20432723 Msa1239190:CDS 40.0%
! TGCTTGCTTGTTGAAGAGTT+TGG - chr8_2:20432755-20432774 Msa1239190:intron 40.0%
!! TCCTTTGATAAAGGCACTGA+AGG - chr8_2:20433599-20433618 Msa1239190:intron 40.0%
ACCTTCAGTGCCTTTATCAA+AGG + chr8_2:20433603-20433622 None:intergenic 40.0%
!! TTGATAAAGGCACTGAAGGT+TGG - chr8_2:20433603-20433622 Msa1239190:intron 40.0%
!! GGACAATTTGCTGTAGGTTA+AGG + chr8_2:20433632-20433651 None:intergenic 40.0%
!! TGAGTTGGACAATTTGCTGT+AGG + chr8_2:20433638-20433657 None:intergenic 40.0%
ATCGAGAAAAGCCACTAAAG+TGG + chr8_2:20433672-20433691 None:intergenic 40.0%
CTTATCCCACTAAGTGAGAT+CGG + chr8_2:20433862-20433881 None:intergenic 40.0%
GCAATCATAGGCGCTATAAT+AGG + chr8_2:20434199-20434218 None:intergenic 40.0%
GATGTACGAGACAGTTTACA+AGG - chr8_2:20434286-20434305 Msa1239190:intron 40.0%
!! TACAAGGCATTGGTTGAAGT+TGG - chr8_2:20434302-20434321 Msa1239190:intron 40.0%
!! ACAAGGCATTGGTTGAAGTT+GGG - chr8_2:20434303-20434322 Msa1239190:intron 40.0%
! GTTCATACCTGTGGAGTATT+CGG + chr8_2:20434437-20434456 None:intergenic 40.0%
GAACATAGAGTTCATACCTG+TGG + chr8_2:20434446-20434465 None:intergenic 40.0%
CAGGAATACGCTTACAATCA+TGG + chr8_2:20434519-20434538 None:intergenic 40.0%
! ATATGGACTCACCGTTTTAC+AGG + chr8_2:20434538-20434557 None:intergenic 40.0%
! ACAGTTTTCCACCTTCTGAT+TGG + chr8_2:20434667-20434686 None:intergenic 40.0%
! GGTTATTTCGACTATTTGCC+TGG + chr8_2:20434860-20434879 None:intergenic 40.0%
AAACATCAACCAGCGTTCTA+TGG - chr8_2:20434950-20434969 Msa1239190:CDS 40.0%
!! CCATGTATATTCAGGTTGGT+AGG + chr8_2:20435009-20435028 None:intergenic 40.0%
CCTACCAACCTGAATATACA+TGG - chr8_2:20435006-20435025 Msa1239190:CDS 40.0%
TTGCCCATGTATATTCAGGT+TGG + chr8_2:20435013-20435032 None:intergenic 40.0%
AAAATGTATACTTGTCCGCG+TGG + chr8_2:20435050-20435069 None:intergenic 40.0%
TAACGGCATGAACTAATTGC+CGG - chr8_2:20435201-20435220 Msa1239190:CDS 40.0%
GAAACTCCTATGTAGGTTCA+TGG - chr8_2:20435439-20435458 Msa1239190:CDS 40.0%
GAACAATGTCCGAAATGAAC+TGG - chr8_2:20435551-20435570 Msa1239190:CDS 40.0%
!! CCCTGTAGAAGTTGATAGAA+AGG - chr8_2:20435627-20435646 Msa1239190:CDS 40.0%
CCCTTTCTATCAACTTCTAC+AGG + chr8_2:20435631-20435650 None:intergenic 40.0%
TCAAGAAGAGTTTCCTGATG+TGG - chr8_2:20435672-20435691 Msa1239190:CDS 40.0%
CAAGAAGAGTTTCCTGATGT+GGG - chr8_2:20435673-20435692 Msa1239190:CDS 40.0%
ACTACATCATAACTCTTCCC+TGG + chr8_2:20435840-20435859 None:intergenic 40.0%
TGTTCAGTGTCTCAAACATG+TGG - chr8_2:20435883-20435902 Msa1239190:CDS 40.0%
CTCCGTGTGTTTATTTGAGT+AGG + chr8_2:20436123-20436142 None:intergenic 40.0%
ACTCAAATAAACACACGGAG+TGG - chr8_2:20436123-20436142 Msa1239190:CDS 40.0%
CTCAAATAAACACACGGAGT+GGG - chr8_2:20436124-20436143 Msa1239190:CDS 40.0%
GGAATCTTAAGTTCGAACCT+GGG + chr8_2:20436163-20436182 None:intergenic 40.0%
TGGAATCTTAAGTTCGAACC+TGG + chr8_2:20436164-20436183 None:intergenic 40.0%
GGGTTTGGATATCCATAAGG+AGG + chr8_2:20429167-20429186 None:intergenic 45.0%
GGAGGATATGCATAAGGGTT+TGG + chr8_2:20429182-20429201 None:intergenic 45.0%
! GATGGATTTGGAGGAGGATA+TGG + chr8_2:20429209-20429228 None:intergenic 45.0%
! TCATGAGATGGATTTGGAGG+AGG + chr8_2:20429215-20429234 None:intergenic 45.0%
! GGATCATGAGATGGATTTGG+AGG + chr8_2:20429218-20429237 None:intergenic 45.0%
GGTGCATATGGATCATGAGA+TGG + chr8_2:20429227-20429246 None:intergenic 45.0%
GCATGAGATGGTTGAGAAGT+AGG + chr8_2:20429341-20429360 None:intergenic 45.0%
GGGTAAGGATAAGCATGAGA+TGG + chr8_2:20429353-20429372 None:intergenic 45.0%
! GGGTATTGTTGGTAAGGGTA+AGG + chr8_2:20429368-20429387 None:intergenic 45.0%
GGTAAGGAGAACTATGAGGA+GGG + chr8_2:20429412-20429431 None:intergenic 45.0%
TGAGGGTAAGGAGAACTATG+AGG + chr8_2:20429416-20429435 None:intergenic 45.0%
!! CTAATTGGAGGGTATTGGTG+AGG + chr8_2:20429434-20429453 None:intergenic 45.0%
GGTAAGGAGAACTATGAGGA+GGG + chr8_2:20429412-20429431 None:intergenic 45.0%
TGAGGGTAAGGAGAACTATG+AGG + chr8_2:20429416-20429435 None:intergenic 45.0%
!! TAACTGGAGGGTATTGGTGA+GGG + chr8_2:20429490-20429509 None:intergenic 45.0%
! CATCACTAACTGGAGGGTAT+TGG + chr8_2:20429496-20429515 None:intergenic 45.0%
CAATACCCTCCAGTTAGTGA+TGG - chr8_2:20429494-20429513 Msa1239190:three_prime_UTR 45.0%
GGGTTAGAACCATCACTAAC+TGG + chr8_2:20429506-20429525 None:intergenic 45.0%
GGTAAGCAGAACTAAGAGGA+GGG + chr8_2:20429526-20429545 None:intergenic 45.0%
TGAGGGTAAGCAGAACTAAG+AGG + chr8_2:20429530-20429549 None:intergenic 45.0%
! TGTGTCATTACTGGTGCACT+TGG + chr8_2:20429596-20429615 None:intergenic 45.0%
ACATTCTTACTCTGGTGTGG+GGG - chr8_2:20429694-20429713 Msa1239190:CDS 45.0%
TCCCGGTTCAAATGATGACT+CGG - chr8_2:20429739-20429758 Msa1239190:CDS 45.0%
ACCGAGTCATCATTTGAACC+GGG + chr8_2:20429743-20429762 None:intergenic 45.0%
CACCGAGTCATCATTTGAAC+CGG + chr8_2:20429744-20429763 None:intergenic 45.0%
CTGGAACAATCTGCAAACTC+TGG + chr8_2:20429772-20429791 None:intergenic 45.0%
AGATTGAGGGAACAGTGACT+AGG - chr8_2:20429939-20429958 Msa1239190:intron 45.0%
!! TGAAAGTGTTGCTCCCAAAC+AGG + chr8_2:20430049-20430068 None:intergenic 45.0%
GTGGTAGGTTCACAGCTTAT+TGG - chr8_2:20430124-20430143 Msa1239190:intron 45.0%
CCGGTCGAACAATTATACTC+AGG - chr8_2:20430160-20430179 Msa1239190:intron 45.0%
! AATGGAAAGCCTTGTAAGCC+AGG - chr8_2:20430220-20430239 Msa1239190:intron 45.0%
AAAACAGCACCTGGCTTACA+AGG + chr8_2:20430232-20430251 None:intergenic 45.0%
GTAACACTCAAAACAGCACC+TGG + chr8_2:20430241-20430260 None:intergenic 45.0%
TATCATCAAGGAGTTGGAGC+AGG - chr8_2:20430295-20430314 Msa1239190:CDS 45.0%
ACCGAACTATATTGGTGTGC+CGG - chr8_2:20430318-20430337 Msa1239190:CDS 45.0%
ACAGTTCCACCTTTCCTCAA+TGG + chr8_2:20430355-20430374 None:intergenic 45.0%
CAAGATGCTCATGTTCCAGA+TGG - chr8_2:20430385-20430404 Msa1239190:CDS 45.0%
ACATTAGGGAGACATCCATC+TGG + chr8_2:20430403-20430422 None:intergenic 45.0%
CAACCTAACTTTGTGCCACA+CGG + chr8_2:20430527-20430546 None:intergenic 45.0%
GTATAATCCGATGCCTTACC+AGG + chr8_2:20430568-20430587 None:intergenic 45.0%
!! AAGGCATCGGATTATACCCT+TGG - chr8_2:20430571-20430590 Msa1239190:intron 45.0%
ATACCCTTGGTGAGCTTCTA+AGG - chr8_2:20430584-20430603 Msa1239190:intron 45.0%
AGACCTTAGAAGCTCACCAA+GGG + chr8_2:20430590-20430609 None:intergenic 45.0%
TAGACCTTAGAAGCTCACCA+AGG + chr8_2:20430591-20430610 None:intergenic 45.0%
!! GCTTCTAAGGTCTAAGTCTC+AGG - chr8_2:20430597-20430616 Msa1239190:intron 45.0%
CTAAGGTCTAAGTCTCAGGA+AGG - chr8_2:20430601-20430620 Msa1239190:intron 45.0%
CCAAGAATGCTTCTTGAGGT+AGG + chr8_2:20430658-20430677 None:intergenic 45.0%
!! CCTACCTCAAGAAGCATTCT+TGG - chr8_2:20430655-20430674 Msa1239190:intron 45.0%
TGCGAGGACAAAGTAACACT+TGG + chr8_2:20430943-20430962 None:intergenic 45.0%
!! AGTGTTACTTTGTCCTCGCA+TGG - chr8_2:20430943-20430962 Msa1239190:CDS 45.0%
! AGCCCAGCTATGTCTTTTTC+CGG + chr8_2:20430969-20430988 None:intergenic 45.0%
!! GATGGTGGGGAGTATCATAT+CGG + chr8_2:20431428-20431447 None:intergenic 45.0%
TGTCTGCAGTGTCCTAAAGA+GGG + chr8_2:20431451-20431470 None:intergenic 45.0%
!! TAGTCATTTCTAGCACCGTG+CGG - chr8_2:20431823-20431842 Msa1239190:intron 45.0%
! TTCTTTGGCGTTTGGTAGCT+AGG - chr8_2:20431910-20431929 Msa1239190:intron 45.0%
! GCGTTTGGTAGCTAGGAAAT+AGG - chr8_2:20431917-20431936 Msa1239190:intron 45.0%
GGAAATAGGAAGGAACCAAC+AGG - chr8_2:20431931-20431950 Msa1239190:intron 45.0%
! AATGCGGACTACTTAATGGC+AGG - chr8_2:20432005-20432024 Msa1239190:intron 45.0%
! ATGCGGACTACTTAATGGCA+GGG - chr8_2:20432006-20432025 Msa1239190:intron 45.0%
TAATGGCAGGGTAATACTGG+TGG - chr8_2:20432018-20432037 Msa1239190:intron 45.0%
GTAATACTGGTGGTTGTCCA+CGG - chr8_2:20432028-20432047 Msa1239190:intron 45.0%
TAATACTGGTGGTTGTCCAC+GGG - chr8_2:20432029-20432048 Msa1239190:intron 45.0%
TTAGAATGCAAGTCGTGCCA+CGG + chr8_2:20432057-20432076 None:intergenic 45.0%
TTAAGAGCTGCGAAACCTAC+AGG - chr8_2:20432129-20432148 Msa1239190:intron 45.0%
TAAGAGCTGCGAAACCTACA+GGG - chr8_2:20432130-20432149 Msa1239190:intron 45.0%
!! CACTAGGAGCATCAGATACA+CGG + chr8_2:20432221-20432240 None:intergenic 45.0%
GTGATGATAATCCTGCAGCT+TGG - chr8_2:20432244-20432263 Msa1239190:intron 45.0%
TTCTGTCAAGGGATTTCCGA+AGG - chr8_2:20432413-20432432 Msa1239190:intron 45.0%
ACTCGTTGTCACACATATGG+TGG + chr8_2:20432516-20432535 None:intergenic 45.0%
GTAATGTTGTGCAGCACGAA+TGG + chr8_2:20432637-20432656 None:intergenic 45.0%
!! ACCACTTAACTTGTGTGGCT+AGG - chr8_2:20432840-20432859 Msa1239190:intron 45.0%
TCCTAGCCACACAAGTTAAG+TGG + chr8_2:20432844-20432863 None:intergenic 45.0%
ACACAATTAGACTCTCGTCG+AGG + chr8_2:20433370-20433389 None:intergenic 45.0%
ATTGTCCAACTCATCACCGT+TGG - chr8_2:20433645-20433664 Msa1239190:intron 45.0%
AAGCCACTAAAGTGGTCCAA+CGG + chr8_2:20433664-20433683 None:intergenic 45.0%
TCTCGATGACCTACTAAGTG+AGG - chr8_2:20433685-20433704 Msa1239190:intron 45.0%
CGGCTACATGGATCAAACAA+TGG + chr8_2:20433842-20433861 None:intergenic 45.0%
ACTAAGTGAGATCGGCTACA+TGG + chr8_2:20433854-20433873 None:intergenic 45.0%
ATGTAGCCGATCTCACTTAG+TGG - chr8_2:20433853-20433872 Msa1239190:CDS 45.0%
TGTAGCCGATCTCACTTAGT+GGG - chr8_2:20433854-20433873 Msa1239190:CDS 45.0%
CGATCTCACTTAGTGGGATA+AGG - chr8_2:20433860-20433879 Msa1239190:CDS 45.0%
TCACTTAGTGGGATAAGGCT+TGG - chr8_2:20433865-20433884 Msa1239190:CDS 45.0%
AGTTATTCCAATGTGGCCAG+AGG - chr8_2:20434010-20434029 Msa1239190:intron 45.0%
GTTATTCCAATGTGGCCAGA+GGG - chr8_2:20434011-20434030 Msa1239190:intron 45.0%
CGAGACAGTTTACAAGGCAT+TGG - chr8_2:20434292-20434311 Msa1239190:intron 45.0%
! ATACCTGTGGAGTATTCGGA+GGG + chr8_2:20434433-20434452 None:intergenic 45.0%
AACTGGGAAACCCAGAACTA+GGG + chr8_2:20434474-20434493 None:intergenic 45.0%
TAACTGGGAAACCCAGAACT+AGG + chr8_2:20434475-20434494 None:intergenic 45.0%
TTTCCACCTTCTGATTGGCA+GGG + chr8_2:20434662-20434681 None:intergenic 45.0%
! TTTTCCACCTTCTGATTGGC+AGG + chr8_2:20434663-20434682 None:intergenic 45.0%
! AGAACGCTGGTTGATGTTTG+CGG + chr8_2:20434949-20434968 None:intergenic 45.0%
ATCAACCAGCGTTCTATGGA+AGG - chr8_2:20434954-20434973 Msa1239190:CDS 45.0%
TTGTTCCTTCCATAGAACGC+TGG + chr8_2:20434962-20434981 None:intergenic 45.0%
AGCGTTCTATGGAAGGAACA+AGG - chr8_2:20434961-20434980 Msa1239190:CDS 45.0%
GCGTTCTATGGAAGGAACAA+GGG - chr8_2:20434962-20434981 Msa1239190:CDS 45.0%
AAGGGACACTGAGATTGCAA+TGG - chr8_2:20434980-20434999 Msa1239190:CDS 45.0%
AGGGACACTGAGATTGCAAT+GGG - chr8_2:20434981-20435000 Msa1239190:CDS 45.0%
TGTGAAACAGCAGAATGTGC+CGG + chr8_2:20435223-20435242 None:intergenic 45.0%
TCACTATGGGCAGAACATAC+AGG - chr8_2:20435472-20435491 Msa1239190:CDS 45.0%
AACGATGTGACAGAGATGAG+AGG - chr8_2:20435589-20435608 Msa1239190:CDS 45.0%
ACGATGTGACAGAGATGAGA+GGG - chr8_2:20435590-20435609 Msa1239190:CDS 45.0%
AACTCTTCTTGACCAGGAAG+AGG + chr8_2:20435664-20435683 None:intergenic 45.0%
TCAGGAAACTCTTCTTGACC+AGG + chr8_2:20435670-20435689 None:intergenic 45.0%
ACTATCTTTCCTCCCACATC+AGG + chr8_2:20435688-20435707 None:intergenic 45.0%
GATGTGGGAGGAAAGATAGT+AGG - chr8_2:20435688-20435707 Msa1239190:CDS 45.0%
! GTGTCGACATGTGTCGTATT+TGG - chr8_2:20435930-20435949 Msa1239190:CDS 45.0%
!! TGCAATGCATGTTGGCTTAG+TGG - chr8_2:20436040-20436059 Msa1239190:CDS 45.0%
! TCGCCTGCACACATTTTATG+TGG + chr8_2:20436184-20436203 None:intergenic 45.0%
AAAATGTGTGCAGGCGAGAA+CGG - chr8_2:20436187-20436206 Msa1239190:five_prime_UTR 45.0%
! TTCATTTGGTCTTTGTCCGC+CGG - chr8_2:20436246-20436265 Msa1239190:five_prime_UTR 45.0%
!! ATATATATATATATATATAG+TGG - chr8_2:20434588-20434607 Msa1239190:intron 5.0%
! CATGGTTCTGCACCTCCTTA+TGG - chr8_2:20429152-20429171 Msa1239190:three_prime_UTR 50.0%
GGAGGAGGATATGGATATGG+AGG + chr8_2:20429200-20429219 None:intergenic 50.0%
! GATACTGGTGGAGGTGCATA+TGG + chr8_2:20429239-20429258 None:intergenic 50.0%
TAAGGAGCAGATACTGGTGG+AGG + chr8_2:20429248-20429267 None:intergenic 50.0%
GGATAAGGAGCAGATACTGG+TGG + chr8_2:20429251-20429270 None:intergenic 50.0%
GGGTAAGGAGAACTATGAGG+AGG + chr8_2:20429413-20429432 None:intergenic 50.0%
GGGTAAGGAGAACTATGAGG+AGG + chr8_2:20429413-20429432 None:intergenic 50.0%
!! CTAACTGGAGGGTATTGGTG+AGG + chr8_2:20429491-20429510 None:intergenic 50.0%
GGGTAAGCAGAACTAAGAGG+AGG + chr8_2:20429527-20429546 None:intergenic 50.0%
CATTCTTACTCTGGTGTGGG+GGG - chr8_2:20429695-20429714 Msa1239190:CDS 50.0%
GGAGCAGGACCGAACTATAT+TGG - chr8_2:20430310-20430329 Msa1239190:CDS 50.0%
CCCGGCACACCAATATAGTT+CGG + chr8_2:20430322-20430341 None:intergenic 50.0%
CCGAACTATATTGGTGTGCC+GGG - chr8_2:20430319-20430338 Msa1239190:CDS 50.0%
!! TGGACAGTGTTGGCGTGATA+TGG - chr8_2:20430453-20430472 Msa1239190:intron 50.0%
CAAACGCTTCGCTTGACGTA+TGG + chr8_2:20430485-20430504 None:intergenic 50.0%
! CATACGTCAAGCGAAGCGTT+TGG - chr8_2:20430483-20430502 Msa1239190:intron 50.0%
AGGTTGTTAAGGGACGCTGT+TGG - chr8_2:20430541-20430560 Msa1239190:intron 50.0%
TGTTGGACCTGGTAAGGCAT+CGG - chr8_2:20430558-20430577 Msa1239190:intron 50.0%
TGTCATGGCAACGCATGATG+AGG - chr8_2:20430886-20430905 Msa1239190:CDS 50.0%
TTACTTTGTCCTCGCATGGC+CGG - chr8_2:20430947-20430966 Msa1239190:CDS 50.0%
TGGCCGGAAAAAGACATAGC+TGG - chr8_2:20430963-20430982 Msa1239190:CDS 50.0%
GGCCGGAAAAAGACATAGCT+GGG - chr8_2:20430964-20430983 Msa1239190:CDS 50.0%
ACATAGCTGGGCTAAGCAAC+AGG - chr8_2:20430976-20430995 Msa1239190:CDS 50.0%
!! GGAGGGCTTGATTTGTGTGA+CGG - chr8_2:20431402-20431421 Msa1239190:intron 50.0%
TGTCCTAAAGAGGGGATGGT+GGG + chr8_2:20431442-20431461 None:intergenic 50.0%
GTCTGCAGTGTCCTAAAGAG+GGG + chr8_2:20431450-20431469 None:intergenic 50.0%
CTGTCTGCAGTGTCCTAAAG+AGG + chr8_2:20431452-20431471 None:intergenic 50.0%
GACACTGCAGACAGTCCATA+AGG - chr8_2:20431458-20431477 Msa1239190:intron 50.0%
! TGACAAACTTTGAGGAGCGC+TGG - chr8_2:20432106-20432125 Msa1239190:intron 50.0%
TTTCCGAAGGAGCCAAGAGA+TGG - chr8_2:20432426-20432445 Msa1239190:intron 50.0%
GATCCATCTCTTGGCTCCTT+CGG + chr8_2:20432432-20432451 None:intergenic 50.0%
TCACCGTTGGACCACTTTAG+TGG - chr8_2:20433658-20433677 Msa1239190:intron 50.0%
! TTAACGGTCTCTAGAGGCAG+AGG - chr8_2:20433726-20433745 Msa1239190:intron 50.0%
! TACCTGTGGAGTATTCGGAG+GGG + chr8_2:20434432-20434451 None:intergenic 50.0%
! CATACCTGTGGAGTATTCGG+AGG + chr8_2:20434434-20434453 None:intergenic 50.0%
ATGTTCCCTCTCCCTAGTTC+TGG - chr8_2:20434460-20434479 Msa1239190:intron 50.0%
! TGTTCCCTCTCCCTAGTTCT+GGG - chr8_2:20434461-20434480 Msa1239190:intron 50.0%
GAAACCCAGAACTAGGGAGA+GGG + chr8_2:20434468-20434487 None:intergenic 50.0%
! GATTTTCGTAAGCGAGAGCG+AGG - chr8_2:20434628-20434647 Msa1239190:intron 50.0%
ACTCTTCCCTGCCAATCAGA+AGG - chr8_2:20434653-20434672 Msa1239190:CDS 50.0%
TTCCGCTAGAGCCGAATAGT+GGG + chr8_2:20435152-20435171 None:intergenic 50.0%
GGTAAGGTTAGACCTCTTCC+TGG - chr8_2:20435649-20435668 Msa1239190:CDS 50.0%
GAAGAGTTTCCTGATGTGGG+AGG - chr8_2:20435676-20435695 Msa1239190:CDS 50.0%
!! GGAGGGTATTGGTGAGGGTA+AGG + chr8_2:20429428-20429447 None:intergenic 55.0%
!! GGAGGGTATTGGTGAGGGTA+AGG + chr8_2:20429428-20429447 None:intergenic 55.0%
TCAGCAGCATGATGCGCAAC+AGG + chr8_2:20430076-20430095 None:intergenic 55.0%
ACATTACAGGGTGGTCCGTG+TGG - chr8_2:20430509-20430528 Msa1239190:intron 55.0%
GGTCCGTGTGGCACAAAGTT+AGG - chr8_2:20430521-20430540 Msa1239190:intron 55.0%
TTAAGGGACGCTGTTGGACC+TGG - chr8_2:20430547-20430566 Msa1239190:intron 55.0%
! TGTCTTTTTCCGGCCATGCG+AGG + chr8_2:20430959-20430978 None:intergenic 55.0%
GCTGGGCTAAGCAACAGGTT+TGG - chr8_2:20430981-20431000 Msa1239190:CDS 55.0%
GTCCTAAAGAGGGGATGGTG+GGG + chr8_2:20431441-20431460 None:intergenic 55.0%
GTGTCCTAAAGAGGGGATGG+TGG + chr8_2:20431443-20431462 None:intergenic 55.0%
GCAGTGTCCTAAAGAGGGGA+TGG + chr8_2:20431446-20431465 None:intergenic 55.0%
GTGGTCCAACGGTGATGAGT+TGG + chr8_2:20433653-20433672 None:intergenic 55.0%
CTTTGAGTGGCAGCACCTGT+TGG + chr8_2:20434041-20434060 None:intergenic 55.0%
! CAACAGGTGCTGCCACTCAA+AGG - chr8_2:20434039-20434058 Msa1239190:intron 55.0%
GGTTGAAGTTGGGCTCGAAG+CGG - chr8_2:20434313-20434332 Msa1239190:intron 55.0%
! ACCTGTGGAGTATTCGGAGG+GGG + chr8_2:20434431-20434450 None:intergenic 55.0%
GGAAACCCAGAACTAGGGAG+AGG + chr8_2:20434469-20434488 None:intergenic 55.0%
CTTCCCTGCCAATCAGAAGG+TGG - chr8_2:20434656-20434675 Msa1239190:CDS 55.0%
! CACCCACTATTCGGCTCTAG+CGG - chr8_2:20435147-20435166 Msa1239190:CDS 55.0%
GTTCCGCTAGAGCCGAATAG+TGG + chr8_2:20435153-20435172 None:intergenic 55.0%
AGAGCCTCGACTGTGTGAGA+AGG - chr8_2:20435524-20435543 Msa1239190:CDS 55.0%
GAGCCTCGACTGTGTGAGAA+GGG - chr8_2:20435525-20435544 Msa1239190:CDS 55.0%
GAACCCTTCTCACACAGTCG+AGG + chr8_2:20435531-20435550 None:intergenic 55.0%
!! GGCGGAAGCACTATAGCACT+AGG + chr8_2:20435807-20435826 None:intergenic 55.0%
ATAGTGCTTCCGCCTTAGCG+AGG - chr8_2:20435813-20435832 Msa1239190:CDS 55.0%
CACACGGAGTGGGAGAAATG+TGG - chr8_2:20436134-20436153 Msa1239190:CDS 55.0%
TGGGAGAAATGTGGTGACCC+AGG - chr8_2:20436143-20436162 Msa1239190:CDS 55.0%
GGACGCTGTTGGACCTGGTA+AGG - chr8_2:20430552-20430571 Msa1239190:intron 60.0%
CTCCCCACCATCCCCTCTTT+AGG - chr8_2:20431436-20431455 Msa1239190:intron 60.0%
TCCTGCAGCTTGGCATGCTC+AGG - chr8_2:20432254-20432273 Msa1239190:intron 60.0%
ACCTGAGCATGCCAAGCTGC+AGG + chr8_2:20432258-20432277 None:intergenic 60.0%
GGAACACCCTCTGGCCACAT+TGG + chr8_2:20434020-20434039 None:intergenic 60.0%
!! TGGCCAGAGGGTGTTCCAAC+AGG - chr8_2:20434023-20434042 Msa1239190:intron 60.0%
GCACCTGTTGGAACACCCTC+TGG + chr8_2:20434029-20434048 None:intergenic 60.0%
! TGTGGAGTATTCGGAGGGGG+AGG + chr8_2:20434428-20434447 None:intergenic 60.0%
TCCCCCTCCGAATACTCCAC+AGG - chr8_2:20434427-20434446 Msa1239190:intron 60.0%
CTCACACAGTCGAGGCTCTC+TGG + chr8_2:20435523-20435542 None:intergenic 60.0%
TTCCGCCTTAGCGAGGTCCA+GGG - chr8_2:20435820-20435839 Msa1239190:CDS 60.0%
TTCCCTGGACCTCGCTAAGG+CGG + chr8_2:20435825-20435844 None:intergenic 60.0%
CTCTTCCCTGGACCTCGCTA+AGG + chr8_2:20435828-20435847 None:intergenic 60.0%
GTGGTTGTCCACGGGAACCG+TGG - chr8_2:20432037-20432056 Msa1239190:intron 65.0%
AAGTCGTGCCACGGTTCCCG+TGG + chr8_2:20432048-20432067 None:intergenic 65.0%
CTTCCGCCTTAGCGAGGTCC+AGG - chr8_2:20435819-20435838 Msa1239190:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 20428984 20436334 20428984 ID=Msa1239190;Name=Msa1239190
chr8_2 mRNA 20428984 20436334 20428984 ID=Msa1239190-mRNA-1;Parent=Msa1239190;Name=Msa1239190-mRNA-1;_AED=0.05;_eAED=0.05;_QI=159|1|1|1|0.9|0.81|11|536|1047
chr8_2 exon 20428984 20429212 20428984 ID=Msa1239190-mRNA-1:exon:7469;Parent=Msa1239190-mRNA-1
chr8_2 exon 20429264 20429864 20429264 ID=Msa1239190-mRNA-1:exon:7468;Parent=Msa1239190-mRNA-1
chr8_2 exon 20430260 20430457 20430260 ID=Msa1239190-mRNA-1:exon:7467;Parent=Msa1239190-mRNA-1
chr8_2 exon 20430870 20431049 20430870 ID=Msa1239190-mRNA-1:exon:7466;Parent=Msa1239190-mRNA-1
chr8_2 exon 20431242 20431390 20431242 ID=Msa1239190-mRNA-1:exon:7465;Parent=Msa1239190-mRNA-1
chr8_2 exon 20432598 20432745 20432598 ID=Msa1239190-mRNA-1:exon:7464;Parent=Msa1239190-mRNA-1
chr8_2 exon 20432860 20432928 20432860 ID=Msa1239190-mRNA-1:exon:7463;Parent=Msa1239190-mRNA-1
chr8_2 exon 20433043 20433291 20433043 ID=Msa1239190-mRNA-1:exon:7462;Parent=Msa1239190-mRNA-1
chr8_2 exon 20433812 20434006 20433812 ID=Msa1239190-mRNA-1:exon:7461;Parent=Msa1239190-mRNA-1
chr8_2 exon 20434321 20434437 20434321 ID=Msa1239190-mRNA-1:exon:7460;Parent=Msa1239190-mRNA-1
chr8_2 exon 20434631 20436334 20434631 ID=Msa1239190-mRNA-1:exon:7459;Parent=Msa1239190-mRNA-1
chr8_2 five_prime_UTR 20436176 20436334 20436176 ID=Msa1239190-mRNA-1:five_prime_utr;Parent=Msa1239190-mRNA-1
chr8_2 CDS 20434631 20436175 20434631 ID=Msa1239190-mRNA-1:cds;Parent=Msa1239190-mRNA-1
chr8_2 CDS 20434321 20434437 20434321 ID=Msa1239190-mRNA-1:cds;Parent=Msa1239190-mRNA-1
chr8_2 CDS 20433812 20434006 20433812 ID=Msa1239190-mRNA-1:cds;Parent=Msa1239190-mRNA-1
chr8_2 CDS 20433043 20433291 20433043 ID=Msa1239190-mRNA-1:cds;Parent=Msa1239190-mRNA-1
chr8_2 CDS 20432860 20432928 20432860 ID=Msa1239190-mRNA-1:cds;Parent=Msa1239190-mRNA-1
chr8_2 CDS 20432598 20432745 20432598 ID=Msa1239190-mRNA-1:cds;Parent=Msa1239190-mRNA-1
chr8_2 CDS 20431242 20431390 20431242 ID=Msa1239190-mRNA-1:cds;Parent=Msa1239190-mRNA-1
chr8_2 CDS 20430870 20431049 20430870 ID=Msa1239190-mRNA-1:cds;Parent=Msa1239190-mRNA-1
chr8_2 CDS 20430260 20430457 20430260 ID=Msa1239190-mRNA-1:cds;Parent=Msa1239190-mRNA-1
chr8_2 CDS 20429571 20429864 20429571 ID=Msa1239190-mRNA-1:cds;Parent=Msa1239190-mRNA-1
chr8_2 three_prime_UTR 20429264 20429570 20429264 ID=Msa1239190-mRNA-1:three_prime_utr;Parent=Msa1239190-mRNA-1
chr8_2 three_prime_UTR 20428984 20429212 20428984 ID=Msa1239190-mRNA-1:three_prime_utr;Parent=Msa1239190-mRNA-1
Gene Sequence

>Msa1239190

ATGGATAATCATGGTTCTGCACCTCCTTATGGATATCCAAACCCTTATGCATATCCTCCATATCCATATCCTCCTCCAAATCCATCTCATGATCCATATGCACCTCCACCAGTATCTGCTCCTTATCCAAATGAATCATATCCACCAAATTCTTCACATTCCTTCTACCCTTATCCACCAAAACCTTTAGAGTTTCCTACTTCTCAACCATCTCATGCTTATCCTTACCCTTACCAACAATACCCTCCAATCAATGATGGTTCAAACCCTCCTCATAGTTCTCCTTACCCTCACCAATACCCTCCAATTAGTGATGGTTCAAACCCTCCTCATAGTTCTCCTTACCCTCACCAATACCCTCCAGTTAGTGATGGTTCTAACCCTCCTCTTAGTTCTGCTTACCCTCATTTGAATGATCTTATGAGCAATGTTCAGATATCTGATAACAGGCCAAGTGCACCAGTAATGACACATTCCTATTCAGTTTTAAATGAAGAGAAGAAAGAGGAGTTTTATGGTCATTCTAGTAGTAATTCTTTTTCAGGCTATGAACATTCTTACTCTGGTGTGGGGGGTTCACAAAATGTTTCAGCTTATCCCGGTTCAAATGATGACTCGGTGCATAGCCAGAGTTTGCAGATTGTTCCAGCTCAGTATAAAGGGTCATTGAAATATTTGCTCTTGCATGGTAATTTAGATATTTATGTTCATAGTGCTAAGAATCTTCCAAATATGGATATGTTTCATAAGACTTTAGGGGATGTGTTTGGTAAATTTCCTGGTAATGTGAGTAATAAGATTGAGGGAACAGTGACTAGGAAGATCACTAGTGATCCTTATGTGTCCATTTCTTTATTGAATGCTGTAGTTGGTAGGACTTTTGTGATTAGCAATAGCGAAAATCCTGTTTGGGAGCAACACTTTCATGTTCCTGTTGCGCATCATGCTGCTGAAGTGCATTTTGTTGTTAAGGATAGTGATGTGGTAGGTTCACAGCTTATTGGTGTTGTAGCGATTCCGGTCGAACAATTATACTCAGGTGAAAAAGTACAAGGGACTTACCCTATCCTTAATAGCAATGGAAAGCCTTGTAAGCCAGGTGCTGTTTTGAGTGTTACCATTCAGTTCCTACCAATAGAGAAACTGATCATTTATCATCAAGGAGTTGGAGCAGGACCGAACTATATTGGTGTGCCGGGAACATATTTTCCATTGAGGAAAGGTGGAACTGTAACTCTATATCAAGATGCTCATGTTCCAGATGGATGTCTCCCTAATGTCATGCTTGATCATGGGATGCATTATGTTCATGGACAGTGTTGGCGTGATATGGTTGATGCCATACGTCAAGCGAAGCGTTTGGTTTACATTACAGGGTGGTCCGTGTGGCACAAAGTTAGGTTGTTAAGGGACGCTGTTGGACCTGGTAAGGCATCGGATTATACCCTTGGTGAGCTTCTAAGGTCTAAGTCTCAGGAAGGAGTGAGAGTGCTTCTTCTTGTTTGGGATGACCCTACCTCAAGAAGCATTCTTGGTTATAAAACAGATGGTGTCATGGCAACGCATGATGAGGAAACTCGACGATTTTTCAAGCACTCTTCTGTCCAAGTGTTACTTTGTCCTCGCATGGCCGGAAAAAGACATAGCTGGGCTAAGCAACAGGAAGTTGGAACAATATATACACATCATCAGAAGACTGTAATTGTAGATGCTGATGCTGGAAATAACTTCAGAAAAATTGTAGCATTTGTTGGAGGGCTTGATTTGTGTGACGGCCGATATGATACTCCCCACCATCCCCTCTTTAGGACACTGCAGACAGTCCATAAGGATGACTATCACAACCCTACTTTCACGGGTAATACTGGTGGTTGTCCACGGGAACCGTGGCACGACTTGCATTCTAAAATTGACGGTCCAGCAGCTTATGATGTTTTGACAAACTTTGAGGAGCGCTGGTTAAGAGCTGCGAAACCTACAGGGATAAAAAAGTTGAAGAGTTTATATGACGATGCATTGCTCAAGATAGAAAGAATTCCGGATATTCTCCGTGTATCTGATGCTCCTAGTGTTTGTGATGATAATCCTGCAGCTTGGCATGCTCAGATATTTCGTTCAATTGATTCAAATTCTGTCAAGGGATTTCCGAAGGAGCCAAGAGATGGATCAATAAAGAACCTTGTATGTGGGAAGAATGTACTGATTGACATGAGCATACACACAGCGTATGTAAAGGCCATTCGTGCTGCACAACATTACATTTATATAGAGAATCAATATTTCATCGGTTCTTCATACAATTGGAGCCAAAATAAGGACATCGGTGCTAATAATTTAATTCCAATGGAAATTGCGCTAAAGATTGCTGAAAAAATAAAGGCAAATGAGAGGTTTGCAGTATACATAGTTATTCCAATGTGGCCAGAGGGTGTTCCAACAGGTGCTGCCACTCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTACGAGACAGTTTACAAGGCATTGGTTGAAGTTGGGCTCGAAGCGGCATTCTCTCCACAAGATTATTTGAACTTTTTCTGTCTTGGAAATCGAGAAACCATAGATATGCATGAGAATATTTCTGTATCTGGAATTCCTCCCCCTCCGAATACTCCACAGGCAAATAGTCGAAATAACCGACGGTTCATGATTTATGTTCATTCGAAAGGCATGATAGTTGATGATGAATATGTGATAATTGGATCCGCAAACATCAACCAGCGTTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCCTACCAACCTGAATATACATGGGCAAGAAAACATTCTTATCCACGCGGACAAGTTCATGGATATAGGATGTCACTATGGGCAGAACATACAGGCACAATCGAAGACTGTTTCTTACAACCAGAGAGCCTCGACTGTGTGAGAAGGGTTCGAACAATGTCCGAAATGAACTGGAAACAATTTTCATCAAACGATGTGACAGAGATGAGAGGGCATTTACTAAAGTACCCTGTAGAAGTTGATAGAAAGGGTAAGGTTAGACCTCTTCCTGGTCAAGAAGAGTTTCCTGATGTGGGAGGAAAGATAGTAGGATCATTTATTGCCATTCAAGAGAATCTAACCATTTGA
Protein sequence

>Msa1239190

MDNHGSAPPYGYPNPYAYPPYPYPPPNPSHDPYAPPPVSAPYPNESYPPNSSHSFYPYPPKPLEFPTSQPSHAYPYPYQQYPPINDGSNPPHSSPYPHQYPPISDGSNPPHSSPYPHQYPPVSDGSNPPLSSAYPHLNDLMSNVQISDNRPSAPVMTHSYSVLNEEKKEEFYGHSSSNSFSGYEHSYSGVGGSQNVSAYPGSNDDSVHSQSLQIVPAQYKGSLKYLLLHGNLDIYVHSAKNLPNMDMFHKTLGDVFGKFPGNVSNKIEGTVTRKITSDPYVSISLLNAVVGRTFVISNSENPVWEQHFHVPVAHHAAEVHFVVKDSDVVGSQLIGVVAIPVEQLYSGEKVQGTYPILNSNGKPCKPGAVLSVTIQFLPIEKLIIYHQGVGAGPNYIGVPGTYFPLRKGGTVTLYQDAHVPDGCLPNVMLDHGMHYVHGQCWRDMVDAIRQAKRLVYITGWSVWHKVRLLRDAVGPGKASDYTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRMAGKRHSWAKQQEVGTIYTHHQKTVIVDADAGNNFRKIVAFVGGLDLCDGRYDTPHHPLFRTLQTVHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRAAKPTGIKKLKSLYDDALLKIERIPDILRVSDAPSVCDDNPAAWHAQIFRSIDSNSVKGFPKEPRDGSIKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQNKDIGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETVYKALVEVGLEAAFSPQDYLNFFCLGNRETIDMHENISVSGIPPPPNTPQANSRNNRRFMIYVHSKGMIVDDEYVIIGSANINQRSMEGTRDTEIAMGAYQPEYTWARKHSYPRGQVHGYRMSLWAEHTGTIEDCFLQPESLDCVRRVRTMSEMNWKQFSSNDVTEMRGHLLKYPVEVDRKGKVRPLPGQEEFPDVGGKIVGSFIAIQENLTI*