AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1410480


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1410480 MtrunA17_Chr4g0035951 96.000 400 14 2 1 398 1 400 0.0 782
Msa1410480 MtrunA17_Chr4g0028361 95.750 400 15 2 1 398 1 400 0.0 781
Msa1410480 MtrunA17_Chr1g0208981 83.146 356 59 1 43 398 37 391 0.0 617
Msa1410480 MtrunA17_Chr4g0035981 96.203 237 9 0 162 398 4 240 6.13e-170 474
Msa1410480 MtrunA17_Chr7g0265821 56.250 352 149 4 51 398 8 358 7.42e-135 390
Msa1410480 MtrunA17_Chr5g0429051 56.534 352 148 4 51 398 8 358 3.13e-134 388
Msa1410480 MtrunA17_Chr5g0447091 56.091 353 151 3 49 398 6 357 5.38e-133 385
Msa1410480 MtrunA17_Chr1g0179211 54.545 352 155 4 51 398 8 358 1.84e-128 374
Msa1410480 MtrunA17_Chr4g0035971 95.652 138 6 0 1 138 1 138 1.73e-88 264
Msa1410480 MtrunA17_Chr5g0429031 60.500 200 78 1 53 251 51 250 9.99e-79 243
Msa1410480 MtrunA17_Chr5g0429021 52.273 132 59 3 270 398 1 131 1.97e-36 129
Msa1410480 MtrunA17_Chr7g0265811 46.809 94 26 1 155 248 21 90 2.32e-20 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1410480 AT2G21330.1 83.333 402 60 5 1 398 1 399 0.0 682
Msa1410480 AT4G38970.1 83.417 398 62 3 4 398 2 398 0.0 678
Msa1410480 AT2G21330.3 80.846 402 60 6 1 398 1 389 0.0 654
Msa1410480 AT2G01140.1 75.949 395 90 2 4 398 2 391 0.0 618
Msa1410480 AT2G21330.2 83.226 310 45 5 1 306 1 307 0.0 520
Msa1410480 AT4G38970.2 79.257 323 56 4 4 316 2 323 0.0 515
Msa1410480 AT4G26530.1 57.062 354 147 4 49 398 6 358 7.09e-137 395
Msa1410480 AT4G26530.3 57.062 354 147 4 49 398 6 358 7.09e-137 395
Msa1410480 AT4G26530.2 57.062 354 147 4 49 398 6 358 7.09e-137 395
Msa1410480 AT2G36460.1 56.534 352 148 4 51 398 8 358 1.57e-134 389
Msa1410480 AT3G52930.1 55.398 352 152 4 51 398 8 358 5.12e-132 383
Msa1410480 AT5G03690.2 55.398 352 153 3 51 398 8 359 4.86e-129 375
Msa1410480 AT4G26520.1 55.398 352 152 4 51 398 8 358 8.50e-127 370
Msa1410480 AT4G26520.3 55.556 351 151 4 51 397 8 357 1.57e-126 369
Msa1410480 AT4G26520.2 55.271 351 152 4 52 398 6 355 3.07e-126 368
Msa1410480 AT4G26520.4 55.271 351 152 4 52 398 6 355 3.07e-126 368
Msa1410480 AT5G03690.1 55.301 349 152 3 54 398 45 393 4.24e-126 369
Msa1410480 AT2G36460.3 55.970 268 113 4 135 398 1 267 3.16e-98 294
Msa1410480 AT2G36460.2 55.970 268 113 4 135 398 1 267 3.16e-98 294
Msa1410480 AT5G03690.3 54.307 267 118 3 136 398 1 267 1.56e-91 276
Msa1410480 AT5G03690.4 54.307 267 118 3 136 398 1 267 1.56e-91 276

Find 153 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTTTATGTTCTATCATTT+TGG 0.179738 tig0023655:+70957 None:intergenic
TTTGACAAACAATTCCTTCT+TGG 0.220264 tig0023655:+71205 None:intergenic
TTCTGCATTGCTGGTTTAAA+TGG 0.221504 tig0023655:+74070 None:intergenic
TTGTCCTTGCACTCAGCTCC+TGG 0.246307 tig0023655:+71679 None:intergenic
GTCACCAGGTCGTGGTATTT+TGG 0.250260 tig0023655:-72887 Msa1410480:CDS
TAGGGTTTGGTGCCCCTTGC+TGG 0.266781 tig0023655:-72439 Msa1410480:CDS
TGCTTGGTATTCTGCATTGC+TGG 0.303849 tig0023655:+74061 None:intergenic
GGGAAGCGTTTGGCTTCAAT+TGG 0.313845 tig0023655:-72838 Msa1410480:CDS
CCAAGCATGGCGTACCCTTC+TGG 0.314758 tig0023655:-72791 Msa1410480:CDS
TTGAAGTAGCACAAAAGGTT+TGG 0.329064 tig0023655:-71777 Msa1410480:CDS
CGTGCCATGGGTTTGGAGAT+TGG 0.341879 tig0023655:+71390 None:intergenic
ACCATGATACCAGGGACAGC+TGG 0.345678 tig0023655:+71598 None:intergenic
ATTGAGCAAAACATTGTTCC+TGG 0.351278 tig0023655:-72667 Msa1410480:CDS
AAGATCTCTGGTTCCACAAT+TGG 0.357070 tig0023655:+71832 None:intergenic
TGAGGAGAATGCCCTCAAAT+TGG 0.371449 tig0023655:+71719 None:intergenic
CTCTGGTGCCATTCTCTTTG+AGG 0.372847 tig0023655:-72740 Msa1410480:CDS
TGAAGTAGCACAAAAGGTTT+GGG 0.375792 tig0023655:-71776 Msa1410480:CDS
CTGGTGACAGTTCCATCTCT+TGG 0.383065 tig0023655:-72772 Msa1410480:CDS
TGGCAAAACGAGCACCTTGC+TGG 0.386451 tig0023655:+72353 None:intergenic
AACGACACGTGCCATGGGTT+TGG 0.390092 tig0023655:+71383 None:intergenic
TGCTACTTGTGGGAAGCGTT+TGG 0.390936 tig0023655:-72848 Msa1410480:CDS
CCCAGCTGTCCCTGGTATCA+TGG 0.393404 tig0023655:-71599 Msa1410480:intron
CAAGGAAGCAGCCTGGGGTC+TGG 0.397653 tig0023655:-72153 Msa1410480:CDS
TGGGTTTGGAGATTGGTTCA+TGG 0.399088 tig0023655:+71397 None:intergenic
ATGTCTTCAAAGCGGTGTTT+TGG 0.400162 tig0023655:+71342 None:intergenic
GCTCTGATAGTGAGACTTGA+TGG 0.402824 tig0023655:+73735 None:intergenic
GTATAGTCAGCAACTGTTGC+AGG 0.413690 tig0023655:+71649 None:intergenic
TGCAGTCAAGGAAGCAGCCT+GGG 0.414972 tig0023655:-72159 Msa1410480:CDS
GCAAGAGCAGAGGGACCATT+GGG 0.415270 tig0023655:+72179 None:intergenic
TGTCCTTGCACTCAGCTCCT+GGG 0.419395 tig0023655:+71680 None:intergenic
TACAACTTAATAACATCTCT+TGG 0.423757 tig0023655:-71021 Msa1410480:three_prime_UTR
GTAAAGAGGTTCATTGTTTG+AGG 0.425568 tig0023655:-73914 Msa1410480:five_prime_UTR
TCCTTCCATCTGTTGTGGAT+TGG 0.437495 tig0023655:+72707 None:intergenic
AGCACAAAAGGTTTGGGCTG+AGG 0.454604 tig0023655:-71770 Msa1410480:CDS
AGTTGGACTTAGCACGGAAA+AGG 0.464478 tig0023655:+71276 None:intergenic
TCCAACTCAATTGCTCAACT+TGG 0.471150 tig0023655:-71260 Msa1410480:CDS
GAACCAGAGATCTTGCTTGA+TGG 0.472497 tig0023655:-71823 Msa1410480:CDS
GTTCATGGCATTCAAGTTGA+GGG 0.472908 tig0023655:+71412 None:intergenic
AATCTTCCTTCCATCTGTTG+TGG 0.472992 tig0023655:+72702 None:intergenic
TGAGAACAATGTCCAATTTG+AGG 0.474283 tig0023655:-71731 Msa1410480:CDS
AATTAATGACGGAAAATGAA+TGG 0.474522 tig0023655:-71125 Msa1410480:three_prime_UTR
AGATCTCTGGTTCCACAATT+GGG 0.476937 tig0023655:+71833 None:intergenic
TGCAAGAGCAGAGGGACCAT+TGG 0.484583 tig0023655:+72178 None:intergenic
CCAGAAGGGTACGCCATGCT+TGG 0.485923 tig0023655:+72791 None:intergenic
TCCCTCTGCTCTTGCAGTCA+AGG 0.489422 tig0023655:-72171 Msa1410480:CDS
GCTCCTGGGGTAACCATGCT+AGG 0.489761 tig0023655:+71694 None:intergenic
TTGGCACCATGACTCATCAT+TGG 0.492416 tig0023655:+72414 None:intergenic
GTGAAGTGATGTCTCATTTG+AGG 0.492762 tig0023655:+73988 None:intergenic
TCGCTACGCTGCAATTAGTC+AGG 0.494622 tig0023655:-72129 Msa1410480:intron
TTGCAGTCAAGGAAGCAGCC+TGG 0.495043 tig0023655:-72160 Msa1410480:CDS
GTGAGACTTGATGGAGCGGC+GGG 0.496907 tig0023655:+73744 None:intergenic
AGGCCGCATAGAGAACGTTC+AGG 0.498349 tig0023655:-71315 Msa1410480:CDS
TCCACATGTCAAGTGATGAT+AGG 0.498626 tig0023655:-74025 Msa1410480:five_prime_UTR
TCTCTTGGAGAGTACATCTC+TGG 0.498855 tig0023655:-72757 Msa1410480:CDS
GGAAGCGTTTGGCTTCAATT+GGG 0.502252 tig0023655:-72837 Msa1410480:CDS
GCATAAGTTGTGTGGTAAAG+AGG 0.506024 tig0023655:-73928 Msa1410480:five_prime_UTR
AAGAAGGAATTGTTTGTCAA+AGG 0.507696 tig0023655:-71203 Msa1410480:CDS
GCATTGCTGGTTTAAATGGA+TGG 0.512547 tig0023655:+74074 None:intergenic
GAGAACAATGTCCAATTTGA+GGG 0.514083 tig0023655:-71730 Msa1410480:CDS
CTCATCATTGGAACCAGCAA+GGG 0.517446 tig0023655:+72426 None:intergenic
CCATGCTTGGCGGTTAACTT+CGG 0.520579 tig0023655:+72804 None:intergenic
TCCTTGACTGCAAGAGCAGA+GGG 0.521193 tig0023655:+72170 None:intergenic
ACCTTGTCAACTTTGATACC+AGG 0.524302 tig0023655:+72649 None:intergenic
TTCTCCTGTGAAGGAGCTTG+AGG 0.524713 tig0023655:+71626 None:intergenic
CTCTACCAATCCACAACAGA+TGG 0.525359 tig0023655:-72712 Msa1410480:CDS
TTGTTCTTGACAAGTCTGAA+TGG 0.530442 tig0023655:-73818 Msa1410480:CDS
GGTTCATGGCATTCAAGTTG+AGG 0.530771 tig0023655:+71411 None:intergenic
TATGAGAACGACACGTGCCA+TGG 0.532775 tig0023655:+71377 None:intergenic
CAACGGATTGGTCCCAATTG+TGG 0.534112 tig0023655:-71845 Msa1410480:CDS
ATACCCTCAAGCTCCTTCAC+AGG 0.534468 tig0023655:-71630 Msa1410480:CDS
AAAACACCGCTTTGAAGACA+TGG 0.536857 tig0023655:-71340 Msa1410480:CDS
TAAAGAGGTTCATTGTTTGA+GGG 0.536953 tig0023655:-73913 Msa1410480:five_prime_UTR
TCTCCATCAAGCAAGATCTC+TGG 0.540606 tig0023655:+71820 None:intergenic
TCTCCTGTGAAGGAGCTTGA+GGG 0.542263 tig0023655:+71627 None:intergenic
CAGAAAACAATTGCGTCACC+AGG 0.544188 tig0023655:-72901 Msa1410480:CDS
GTCAGCAACTGTTGCAGGAG+AGG 0.545139 tig0023655:+71654 None:intergenic
CCATGATACCAGGGACAGCT+GGG 0.545501 tig0023655:+71599 None:intergenic
ACGCTTCCCACAAGTAGCAT+TGG 0.547732 tig0023655:+72852 None:intergenic
TGTTCTTGACAAGTCTGAAT+GGG 0.550387 tig0023655:-73817 Msa1410480:CDS
GAGAGTCTCCTCAAAGAGAA+TGG 0.550591 tig0023655:+72732 None:intergenic
TGAATCTGAGGAAGCCAAGA+AGG 0.552492 tig0023655:-71219 Msa1410480:CDS
GTCCTTGCACTCAGCTCCTG+GGG 0.552893 tig0023655:+71681 None:intergenic
CACTGGTGAGGGTGAATCTG+AGG 0.554064 tig0023655:-71231 Msa1410480:CDS
GAAGGGTACGCCATGCTTGG+CGG 0.555457 tig0023655:+72794 None:intergenic
TCCAAGTTGAGCAATTGAGT+TGG 0.559400 tig0023655:+71259 None:intergenic
AGCGTAGCGAGCCAGACCCC+AGG 0.559466 tig0023655:+72142 None:intergenic
TCAAGTCTCACTATCAGAGC+TGG 0.559579 tig0023655:-73732 Msa1410480:CDS
GGATGATAACAATGCTTGCT+TGG 0.562542 tig0023655:+74045 None:intergenic
AGGAGCTGAGTGCAAGGACA+AGG 0.565868 tig0023655:-71677 Msa1410480:CDS
ATCTTGCTTGATGGAGAACA+TGG 0.567139 tig0023655:-71814 Msa1410480:CDS
ACCTATCATCACTTGACATG+TGG 0.567903 tig0023655:+74024 None:intergenic
GGTTTATTAGGACAACGGAT+TGG 0.572758 tig0023655:-71857 Msa1410480:intron
TACCCCAGGAGCTGAGTGCA+AGG 0.573997 tig0023655:-71683 Msa1410480:CDS
ACAATTGCGTCACCAGGTCG+TGG 0.577031 tig0023655:-72895 Msa1410480:CDS
CAATTGAGTTGGACTTAGCA+CGG 0.579344 tig0023655:+71270 None:intergenic
TTTGTCTGGTGGACAATCTG+AGG 0.579742 tig0023655:-71444 Msa1410480:CDS
GTGTCACATACCATGATACC+AGG 0.579988 tig0023655:+71589 None:intergenic
TGACAAGTCTGAATGGGTGA+AGG 0.580261 tig0023655:-73811 Msa1410480:CDS
AAGCCTAGCATGGTTACCCC+AGG 0.582649 tig0023655:-71697 Msa1410480:CDS
AGTAGCATTGGACTCATCCA+TGG 0.582662 tig0023655:+72864 None:intergenic
CGCGGTCTTAACGAGCTCAT+CGG 0.585953 tig0023655:+73701 None:intergenic
ACTCATCATTGGAACCAGCA+AGG 0.586276 tig0023655:+72425 None:intergenic
CAGCGGACACAGAAGGTTGA+CGG 0.588273 tig0023655:+73778 None:intergenic
ATGAGAACGACACGTGCCAT+GGG 0.588604 tig0023655:+71378 None:intergenic
CTGGTTCCAATGATGAGTCA+TGG 0.590508 tig0023655:-72420 Msa1410480:CDS
AATGATGAGTCATGGTGCCA+AGG 0.590718 tig0023655:-72412 Msa1410480:CDS
CATTCTCCTCAAGCCTAGCA+TGG 0.591042 tig0023655:-71707 Msa1410480:CDS
GACAAGTCTGAATGGGTGAA+GGG 0.591129 tig0023655:-73810 Msa1410480:CDS
TTCCTTGACTGCAAGAGCAG+AGG 0.592530 tig0023655:+72169 None:intergenic
AGGCAAGACCGTCTAGACCT+TGG 0.593561 tig0023655:+72395 None:intergenic
GAGATGGAACTGTCACCAGA+AGG 0.597318 tig0023655:+72776 None:intergenic
TCATGGTGCCAAGGTCTAGA+CGG 0.600249 tig0023655:-72403 Msa1410480:CDS
GAGATGTACTCTCCAAGAGA+TGG 0.600655 tig0023655:+72760 None:intergenic
AAAGAAGTGCATAAGTTGTG+TGG 0.601057 tig0023655:-73936 Msa1410480:five_prime_UTR
CCGAAGTTAACCGCCAAGCA+TGG 0.601093 tig0023655:-72804 Msa1410480:CDS
ATGAGTCCAATGCTACTTGT+GGG 0.603827 tig0023655:-72858 Msa1410480:CDS
ATTGGACATTGTTCTCAGCA+AGG 0.604841 tig0023655:+71737 None:intergenic
CATCGTACAGCGGACACAGA+AGG 0.607413 tig0023655:+73771 None:intergenic
TCCTGGTATCAAAGTTGACA+AGG 0.608575 tig0023655:-72650 Msa1410480:intron
TTAATGGTTTATTAGGACAA+CGG 0.610985 tig0023655:-71862 Msa1410480:intron
GGGTAACCATGCTAGGCTTG+AGG 0.616311 tig0023655:+71701 None:intergenic
CTTGGAAAGTACACTGGTGA+GGG 0.616339 tig0023655:-71242 Msa1410480:CDS
GAAAAGAGATGCTGATGCAG+AGG 0.620632 tig0023655:+73851 None:intergenic
AGTGAGACTTGATGGAGCGG+CGG 0.624081 tig0023655:+73743 None:intergenic
AAACACCGCTTTGAAGACAT+GGG 0.624450 tig0023655:-71339 Msa1410480:CDS
GCAGCATCAACAATTAATGA+CGG 0.626376 tig0023655:-71136 Msa1410480:three_prime_UTR
ACCAATCCACAACAGATGGA+AGG 0.626896 tig0023655:-72708 Msa1410480:CDS
ACTTGGAAAGTACACTGGTG+AGG 0.631708 tig0023655:-71243 Msa1410480:CDS
GATGAGTCCAATGCTACTTG+TGG 0.631942 tig0023655:-72859 Msa1410480:CDS
ACCGCTTTGAAGACATGGGG+AGG 0.635657 tig0023655:-71335 Msa1410480:CDS
ACTGTTGTGAGCATCCCCAA+TGG 0.641479 tig0023655:-72194 Msa1410480:CDS
AGATGGAACTGTCACCAGAA+GGG 0.643682 tig0023655:+72777 None:intergenic
GTAGTATGCAGCTGAACGAG+AGG 0.646365 tig0023655:+72375 None:intergenic
GCAGTCAAGGAAGCAGCCTG+GGG 0.647968 tig0023655:-72158 Msa1410480:CDS
TGAACCAATCTCCAAACCCA+TGG 0.649676 tig0023655:-71394 Msa1410480:CDS
GGCGGGGCTGCATCGTACAG+CGG 0.653649 tig0023655:+73761 None:intergenic
GCTCAACTTGGAAAGTACAC+TGG 0.658104 tig0023655:-71248 Msa1410480:CDS
GCCTCCCCATGTCTTCAAAG+CGG 0.661856 tig0023655:+71334 None:intergenic
CATGATACCAGGGACAGCTG+GGG 0.665632 tig0023655:+71600 None:intergenic
TCATCATTGGAACCAGCAAG+GGG 0.668545 tig0023655:+72427 None:intergenic
TCAGCTGCATACTACCAGCA+AGG 0.670241 tig0023655:-72367 Msa1410480:CDS
ATGATACCAGGGACAGCTGG+GGG 0.672628 tig0023655:+71601 None:intergenic
ATGGCCAAAATACCACGACC+TGG 0.675188 tig0023655:+72883 None:intergenic
GATAGTGAGACTTGATGGAG+CGG 0.675319 tig0023655:+73740 None:intergenic
CGGACACAGAAGGTTGACGG+AGG 0.684513 tig0023655:+73781 None:intergenic
TCTTGTTAGACAGTAAACAA+TGG 0.685628 tig0023655:-73874 Msa1410480:exon
GGACACAGAAGGTTGACGGA+GGG 0.697401 tig0023655:+73782 None:intergenic
TGAGACTTGATGGAGCGGCG+GGG 0.708924 tig0023655:+73745 None:intergenic
CAAGAGCAGAGGGACCATTG+GGG 0.710291 tig0023655:+72180 None:intergenic
AACACCGCTTTGAAGACATG+GGG 0.711193 tig0023655:-71338 Msa1410480:CDS
CTGCCTGAACGTTCTCTATG+CGG 0.711654 tig0023655:+71312 None:intergenic
CGATGAGCTCGTTAAGACCG+CGG 0.717465 tig0023655:-73700 Msa1410480:intron
TGTCACATACCATGATACCA+GGG 0.730745 tig0023655:+71590 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAATGAACTATAATT+TGG + tig0023655:70927-70946 None:intergenic 10.0%
!!! ATTATAGTTCATTTTTTAAA+CGG - tig0023655:70928-70947 Msa1410480:three_prime_UTR 10.0%
!!! TTACATAAATAATTTTATCA+AGG - tig0023655:72979-72998 Msa1410480:intron 10.0%
!!! TTAAAAAGTTTGTTTAAAAA+TGG + tig0023655:74125-74144 None:intergenic 10.0%
!!! GTTTTTTAAGTTATACTAAT+CGG + tig0023655:71387-71406 None:intergenic 15.0%
!!! AACATTTTATTTTATTCCAA+TGG + tig0023655:71830-71849 None:intergenic 15.0%
!!! ATATTTTTTTCTAGAAAGTA+TGG - tig0023655:71998-72017 Msa1410480:intron 15.0%
!!! TATTTTTTTCTAGAAAGTAT+GGG - tig0023655:71999-72018 Msa1410480:intron 15.0%
!! GCTAAAATTTATTCATTTAA+TGG - tig0023655:73158-73177 Msa1410480:intron 15.0%
!! TATTCATTTAATGGTTTATT+AGG - tig0023655:73167-73186 Msa1410480:intron 15.0%
!! TATGAACAAAGATAAAAATT+TGG + tig0023655:73499-73518 None:intergenic 15.0%
!!! ATGTTAAAAAGAAATCATTT+TGG + tig0023655:74102-74121 None:intergenic 15.0%
!! AATCAATTGTATAATTTGAG+TGG + tig0023655:72941-72960 None:intergenic 20.0%
!! TTATAATATTATGTAACTGC+AGG + tig0023655:73073-73092 None:intergenic 20.0%
!! AATACAAAGAACAATGTATT+TGG + tig0023655:73476-73495 None:intergenic 20.0%
!! CAAAATACAATATACAACTT+TGG + tig0023655:73560-73579 None:intergenic 20.0%
! TTCTAGCATATGTGTTTAAT+CGG + tig0023655:71413-71432 None:intergenic 25.0%
!!! TAATTCTTTTTTTTGCGTAG+TGG - tig0023655:71462-71481 Msa1410480:intron 25.0%
!!! AATTCTTTTTTTTGCGTAGT+GGG - tig0023655:71463-71482 Msa1410480:intron 25.0%
! AAAAAGTAGACTTAAGAAAG+TGG - tig0023655:71747-71766 Msa1410480:CDS 25.0%
! AAAAGTAGACTTAAGAAAGT+GGG - tig0023655:71748-71767 Msa1410480:CDS 25.0%
! TGAAATTCTTAAAACTGATG+TGG - tig0023655:71849-71868 Msa1410480:CDS 25.0%
! TTACATTGTTCATGTTTCTT+TGG - tig0023655:72069-72088 Msa1410480:intron 25.0%
!! ACTCTATGTAACTACATTTT+TGG - tig0023655:72422-72441 Msa1410480:CDS 25.0%
!!! ATTTTAATTTTGCTTCCACA+GGG + tig0023655:72732-72751 None:intergenic 25.0%
!!! AATTTTAATTTTGCTTCCAC+AGG + tig0023655:72733-72752 None:intergenic 25.0%
! GGAAGCAAAATTAAAATTTC+AGG - tig0023655:72735-72754 Msa1410480:CDS 25.0%
! ATATGTGATTGAAATTCACA+TGG + tig0023655:72815-72834 None:intergenic 25.0%
! GTGAATTTCAATCACATATT+AGG - tig0023655:72816-72835 Msa1410480:CDS 25.0%
! ATGAGATTGATTAAAAACCT+CGG - tig0023655:73136-73155 Msa1410480:intron 25.0%
!!! AAATGAATAAATTTTAGCCG+AGG + tig0023655:73156-73175 None:intergenic 25.0%
! TTAATGGTTTATTAGGACAA+CGG - tig0023655:73174-73193 Msa1410480:intron 25.0%
!! TGTTATGTATAGTTTTTGTC+TGG - tig0023655:73578-73597 Msa1410480:intron 25.0%
!! AATTAATGACGGAAAATGAA+TGG - tig0023655:73911-73930 Msa1410480:five_prime_UTR 25.0%
!!! GTGTAATGTTTTTATAGTCT+TGG - tig0023655:73960-73979 Msa1410480:five_prime_UTR 25.0%
! TACAACTTAATAACATCTCT+TGG - tig0023655:74015-74034 Msa1410480:five_prime_UTR 25.0%
!! TGGTTTATGTTCTATCATTT+TGG + tig0023655:74082-74101 None:intergenic 25.0%
TAAAGAGGTTCATTGTTTGA+GGG - tig0023655:71123-71142 Msa1410480:three_prime_UTR 30.0%
TCTTGTTAGACAGTAAACAA+TGG - tig0023655:71162-71181 Msa1410480:three_prime_UTR 30.0%
TTAAGTTAAGTATCATACCG+CGG + tig0023655:71356-71375 None:intergenic 30.0%
!! TAGTTTTCAAACTAGCTTGT+TGG - tig0023655:71490-71509 Msa1410480:intron 30.0%
GTTAAACCATGTATACTAAG+TGG - tig0023655:71512-71531 Msa1410480:intron 30.0%
! ATGCTCTAAGTAGATAAACA+TGG + tig0023655:71609-71628 None:intergenic 30.0%
ATGGAAAGGGACATTAAAAA+TGG - tig0023655:71873-71892 Msa1410480:intron 30.0%
!!! TATTTTTTGTTGCTTGTGTG+TGG - tig0023655:72109-72128 Msa1410480:intron 30.0%
CAAAGTTGACAAGGTATATT+TGG - tig0023655:72395-72414 Msa1410480:CDS 30.0%
TAATAGTATCAACTAGCACT+CGG + tig0023655:72504-72523 None:intergenic 30.0%
CATAAGTAGACACATAAGTA+TGG + tig0023655:72553-72572 None:intergenic 30.0%
TTCTGTGACTATGAACAATA+GGG - tig0023655:72579-72598 Msa1410480:intron 30.0%
TCAAATAGACACTAACCATT+TGG + tig0023655:72706-72725 None:intergenic 30.0%
!!! TTTTAATTTTGCTTCCACAG+GGG + tig0023655:72731-72750 None:intergenic 30.0%
CATTAAAAACCTTGATGTTG+CGG + tig0023655:73035-73054 None:intergenic 30.0%
! CATCAAGGTTTTTAATGTCT+TGG - tig0023655:73038-73057 Msa1410480:intron 30.0%
!!! AACTTTTGAAGTAGCACAAA+AGG - tig0023655:73254-73273 Msa1410480:intron 30.0%
! TATGTATAGTTTTTGTCTGG+TGG - tig0023655:73581-73600 Msa1410480:intron 30.0%
TTTGACAAACAATTCCTTCT+TGG + tig0023655:73834-73853 None:intergenic 30.0%
AAGAAGGAATTGTTTGTCAA+AGG - tig0023655:73833-73852 Msa1410480:CDS 30.0%
!!! TTGGAGACTATTTTTGTTTG+TGG - tig0023655:73979-73998 Msa1410480:five_prime_UTR 30.0%
!! TTCTGCATTGCTGGTTTAAA+TGG + tig0023655:70969-70988 None:intergenic 35.0%
! AAAGAAGTGCATAAGTTGTG+TGG - tig0023655:71100-71119 Msa1410480:three_prime_UTR 35.0%
GTAAAGAGGTTCATTGTTTG+AGG - tig0023655:71122-71141 Msa1410480:three_prime_UTR 35.0%
TTGTTCTTGACAAGTCTGAA+TGG - tig0023655:71218-71237 Msa1410480:CDS 35.0%
TGTTCTTGACAAGTCTGAAT+GGG - tig0023655:71219-71238 Msa1410480:CDS 35.0%
GTTAGGAACAGGTTCTTATT+TGG - tig0023655:71658-71677 Msa1410480:CDS 35.0%
TTTGGTTATACCACTAGAGT+TGG - tig0023655:71676-71695 Msa1410480:CDS 35.0%
TGAAATTCAACCAACTCTAG+TGG + tig0023655:71689-71708 None:intergenic 35.0%
! AGAGTTGGTTGAATTTCATG+TGG - tig0023655:71691-71710 Msa1410480:CDS 35.0%
AAGGAGTTGAAAGTGAGATA+AGG - tig0023655:71779-71798 Msa1410480:CDS 35.0%
TGAGATACATGTTACACCAT+TGG - tig0023655:71811-71830 Msa1410480:CDS 35.0%
TTCTTAAAACTGATGTGGCA+TGG - tig0023655:71854-71873 Msa1410480:intron 35.0%
ATTGAGCAAAACATTGTTCC+TGG - tig0023655:72369-72388 Msa1410480:CDS 35.0%
TGGATGGTAGTAGAAATAAG+CGG + tig0023655:72533-72552 None:intergenic 35.0%
AGTAGACACATAAGTATGGA+TGG + tig0023655:72549-72568 None:intergenic 35.0%
GTTCTGTGACTATGAACAAT+AGG - tig0023655:72578-72597 Msa1410480:intron 35.0%
TGACTATGAACAATAGGGTT+TGG - tig0023655:72584-72603 Msa1410480:intron 35.0%
!! TTTAATTTTGCTTCCACAGG+GGG + tig0023655:72730-72749 None:intergenic 35.0%
! GTTTTTAATGTCTTGGCAGT+TGG - tig0023655:73045-73064 Msa1410480:intron 35.0%
TTGAAGTAGCACAAAAGGTT+TGG - tig0023655:73259-73278 Msa1410480:intron 35.0%
TGAAGTAGCACAAAAGGTTT+GGG - tig0023655:73260-73279 Msa1410480:intron 35.0%
TGAGAACAATGTCCAATTTG+AGG - tig0023655:73305-73324 Msa1410480:intron 35.0%
GAGAACAATGTCCAATTTGA+GGG - tig0023655:73306-73325 Msa1410480:intron 35.0%
GCAGCATCAACAATTAATGA+CGG - tig0023655:73900-73919 Msa1410480:five_prime_UTR 35.0%
!! GCATTGCTGGTTTAAATGGA+TGG + tig0023655:70965-70984 None:intergenic 40.0%
GGATGATAACAATGCTTGCT+TGG + tig0023655:70994-71013 None:intergenic 40.0%
TCCACATGTCAAGTGATGAT+AGG - tig0023655:71011-71030 Msa1410480:three_prime_UTR 40.0%
ACCTATCATCACTTGACATG+TGG + tig0023655:71015-71034 None:intergenic 40.0%
GTGAAGTGATGTCTCATTTG+AGG + tig0023655:71051-71070 None:intergenic 40.0%
GCATAAGTTGTGTGGTAAAG+AGG - tig0023655:71108-71127 Msa1410480:three_prime_UTR 40.0%
CTAGTTGAGCTCTTGAAGTT+AGG - tig0023655:71641-71660 Msa1410480:CDS 40.0%
AGACTTAAGAAAGTGGGTGA+AGG - tig0023655:71754-71773 Msa1410480:CDS 40.0%
AAGAAAGTGGGTGAAGGAAA+AGG - tig0023655:71760-71779 Msa1410480:CDS 40.0%
AAAACTGATGTGGCATGGAA+AGG - tig0023655:71859-71878 Msa1410480:intron 40.0%
AAACTGATGTGGCATGGAAA+GGG - tig0023655:71860-71879 Msa1410480:intron 40.0%
! ATGAGTCCAATGCTACTTGT+GGG - tig0023655:72178-72197 Msa1410480:CDS 40.0%
AATCTTCCTTCCATCTGTTG+TGG + tig0023655:72337-72356 None:intergenic 40.0%
TCCTGGTATCAAAGTTGACA+AGG - tig0023655:72386-72405 Msa1410480:CDS 40.0%
ACCTTGTCAACTTTGATACC+AGG + tig0023655:72390-72409 None:intergenic 40.0%
TTGATGTTGCGGTTAAAGTC+GGG + tig0023655:73024-73043 None:intergenic 40.0%
CTTGATGTTGCGGTTAAAGT+CGG + tig0023655:73025-73044 None:intergenic 40.0%
GGTTTATTAGGACAACGGAT+TGG - tig0023655:73179-73198 Msa1410480:intron 40.0%
! AGATCTCTGGTTCCACAATT+GGG + tig0023655:73206-73225 None:intergenic 40.0%
! AAGATCTCTGGTTCCACAAT+TGG + tig0023655:73207-73226 None:intergenic 40.0%
ATCTTGCTTGATGGAGAACA+TGG - tig0023655:73222-73241 Msa1410480:intron 40.0%
ATTGGACATTGTTCTCAGCA+AGG + tig0023655:73302-73321 None:intergenic 40.0%
TGTCACATACCATGATACCA+GGG + tig0023655:73449-73468 None:intergenic 40.0%
!! GTTCATGGCATTCAAGTTGA+GGG + tig0023655:73627-73646 None:intergenic 40.0%
! ATGTCTTCAAAGCGGTGTTT+TGG + tig0023655:73697-73716 None:intergenic 40.0%
!! AAAACACCGCTTTGAAGACA+TGG - tig0023655:73696-73715 Msa1410480:intron 40.0%
!! AAACACCGCTTTGAAGACAT+GGG - tig0023655:73697-73716 Msa1410480:intron 40.0%
!! CAATTGAGTTGGACTTAGCA+CGG + tig0023655:73769-73788 None:intergenic 40.0%
TCCAACTCAATTGCTCAACT+TGG - tig0023655:73776-73795 Msa1410480:CDS 40.0%
! TCCAAGTTGAGCAATTGAGT+TGG + tig0023655:73780-73799 None:intergenic 40.0%
TGCTTGGTATTCTGCATTGC+TGG + tig0023655:70978-70997 None:intergenic 45.0%
GAAAAGAGATGCTGATGCAG+AGG + tig0023655:71188-71207 None:intergenic 45.0%
TGACAAGTCTGAATGGGTGA+AGG - tig0023655:71225-71244 Msa1410480:CDS 45.0%
GACAAGTCTGAATGGGTGAA+GGG - tig0023655:71226-71245 Msa1410480:CDS 45.0%
GATAGTGAGACTTGATGGAG+CGG + tig0023655:71299-71318 None:intergenic 45.0%
! GCTCTGATAGTGAGACTTGA+TGG + tig0023655:71304-71323 None:intergenic 45.0%
TCAAGTCTCACTATCAGAGC+TGG - tig0023655:71304-71323 Msa1410480:CDS 45.0%
TAAGTGGCCGACCACTTAAT+GGG - tig0023655:71528-71547 Msa1410480:intron 45.0%
GCCTTATCCCATTAAGTGGT+CGG + tig0023655:71538-71557 None:intergenic 45.0%
! CCAAGCCTTATCCCATTAAG+TGG + tig0023655:71542-71561 None:intergenic 45.0%
CCACTTAATGGGATAAGGCT+TGG - tig0023655:71539-71558 Msa1410480:intron 45.0%
GAGCTCTTGAAGTTAGGAAC+AGG - tig0023655:71647-71666 Msa1410480:CDS 45.0%
CTGCATCAACAATGCGAAAG+TGG + tig0023655:71962-71981 None:intergenic 45.0%
CAGAAAACAATTGCGTCACC+AGG - tig0023655:72135-72154 Msa1410480:CDS 45.0%
! AGTAGCATTGGACTCATCCA+TGG + tig0023655:72175-72194 None:intergenic 45.0%
! GATGAGTCCAATGCTACTTG+TGG - tig0023655:72177-72196 Msa1410480:CDS 45.0%
!! GGAAGCGTTTGGCTTCAATT+GGG - tig0023655:72199-72218 Msa1410480:CDS 45.0%
AGATGGAACTGTCACCAGAA+GGG + tig0023655:72262-72281 None:intergenic 45.0%
GAGATGTACTCTCCAAGAGA+TGG + tig0023655:72279-72298 None:intergenic 45.0%
! TCTCTTGGAGAGTACATCTC+TGG - tig0023655:72279-72298 Msa1410480:intron 45.0%
GAGAGTCTCCTCAAAGAGAA+TGG + tig0023655:72307-72326 None:intergenic 45.0%
CTCTACCAATCCACAACAGA+TGG - tig0023655:72324-72343 Msa1410480:intron 45.0%
ACCAATCCACAACAGATGGA+AGG - tig0023655:72328-72347 Msa1410480:intron 45.0%
TCCTTCCATCTGTTGTGGAT+TGG + tig0023655:72332-72351 None:intergenic 45.0%
TCATCATTGGAACCAGCAAG+GGG + tig0023655:72612-72631 None:intergenic 45.0%
CTCATCATTGGAACCAGCAA+GGG + tig0023655:72613-72632 None:intergenic 45.0%
ACTCATCATTGGAACCAGCA+AGG + tig0023655:72614-72633 None:intergenic 45.0%
CTGGTTCCAATGATGAGTCA+TGG - tig0023655:72616-72635 Msa1410480:intron 45.0%
TTGGCACCATGACTCATCAT+TGG + tig0023655:72625-72644 None:intergenic 45.0%
! AATGATGAGTCATGGTGCCA+AGG - tig0023655:72624-72643 Msa1410480:intron 45.0%
!! AAGGTGCTCGTTTTGCCAAA+TGG - tig0023655:72688-72707 Msa1410480:CDS 45.0%
CGACTTTAACCGCAACATCA+AGG - tig0023655:73023-73042 Msa1410480:intron 45.0%
GAACCAGAGATCTTGCTTGA+TGG - tig0023655:73213-73232 Msa1410480:intron 45.0%
TCTCCATCAAGCAAGATCTC+TGG + tig0023655:73219-73238 None:intergenic 45.0%
TGAGGAGAATGCCCTCAAAT+TGG + tig0023655:73320-73339 None:intergenic 45.0%
GTATAGTCAGCAACTGTTGC+AGG + tig0023655:73390-73409 None:intergenic 45.0%
GTGTCACATACCATGATACC+AGG + tig0023655:73450-73469 None:intergenic 45.0%
! TTTGTCTGGTGGACAATCTG+AGG - tig0023655:73592-73611 Msa1410480:intron 45.0%
!! GGTTCATGGCATTCAAGTTG+AGG + tig0023655:73628-73647 None:intergenic 45.0%
! TGGGTTTGGAGATTGGTTCA+TGG + tig0023655:73642-73661 None:intergenic 45.0%
TGAACCAATCTCCAAACCCA+TGG - tig0023655:73642-73661 Msa1410480:intron 45.0%
!! AACACCGCTTTGAAGACATG+GGG - tig0023655:73698-73717 Msa1410480:intron 45.0%
AGTTGGACTTAGCACGGAAA+AGG + tig0023655:73763-73782 None:intergenic 45.0%
! GCTCAACTTGGAAAGTACAC+TGG - tig0023655:73788-73807 Msa1410480:CDS 45.0%
! ACTTGGAAAGTACACTGGTG+AGG - tig0023655:73793-73812 Msa1410480:CDS 45.0%
! CTTGGAAAGTACACTGGTGA+GGG - tig0023655:73794-73813 Msa1410480:CDS 45.0%
TGAATCTGAGGAAGCCAAGA+AGG - tig0023655:73817-73836 Msa1410480:CDS 45.0%
GGTCGGCCACTTAGTATACA+TGG + tig0023655:71521-71540 None:intergenic 50.0%
CTAAGTGGCCGACCACTTAA+TGG - tig0023655:71527-71546 Msa1410480:intron 50.0%
GCCGACCACTTAATGGGATA+AGG - tig0023655:71534-71553 Msa1410480:intron 50.0%
! GTCACCAGGTCGTGGTATTT+TGG - tig0023655:72149-72168 Msa1410480:CDS 50.0%
ATGGCCAAAATACCACGACC+TGG + tig0023655:72156-72175 None:intergenic 50.0%
!!! AGGTCGTGGTATTTTGGCCA+TGG - tig0023655:72155-72174 Msa1410480:CDS 50.0%
ACGCTTCCCACAAGTAGCAT+TGG + tig0023655:72187-72206 None:intergenic 50.0%
!! TGCTACTTGTGGGAAGCGTT+TGG - tig0023655:72188-72207 Msa1410480:CDS 50.0%
!! GGGAAGCGTTTGGCTTCAAT+TGG - tig0023655:72198-72217 Msa1410480:CDS 50.0%
CCATGCTTGGCGGTTAACTT+CGG + tig0023655:72235-72254 None:intergenic 50.0%
GAGATGGAACTGTCACCAGA+AGG + tig0023655:72263-72282 None:intergenic 50.0%
CTGGTGACAGTTCCATCTCT+TGG - tig0023655:72264-72283 Msa1410480:intron 50.0%
!! CTCTGGTGCCATTCTCTTTG+AGG - tig0023655:72296-72315 Msa1410480:intron 50.0%
! TCATGGTGCCAAGGTCTAGA+CGG - tig0023655:72633-72652 Msa1410480:intron 50.0%
GTAGTATGCAGCTGAACGAG+AGG + tig0023655:72664-72683 None:intergenic 50.0%
TCAGCTGCATACTACCAGCA+AGG - tig0023655:72669-72688 Msa1410480:CDS 50.0%
GTGTCTATTTGATCCCCCTG+TGG - tig0023655:72714-72733 Msa1410480:CDS 50.0%
ACTGTTGTGAGCATCCCCAA+TGG - tig0023655:72842-72861 Msa1410480:CDS 50.0%
TCCTTGACTGCAAGAGCAGA+GGG + tig0023655:72869-72888 None:intergenic 50.0%
TTCCTTGACTGCAAGAGCAG+AGG + tig0023655:72870-72889 None:intergenic 50.0%
TCGCTACGCTGCAATTAGTC+AGG - tig0023655:72907-72926 Msa1410480:intron 50.0%
!! CAACGGATTGGTCCCAATTG+TGG - tig0023655:73191-73210 Msa1410480:intron 50.0%
AGCACAAAAGGTTTGGGCTG+AGG - tig0023655:73266-73285 Msa1410480:intron 50.0%
CATTCTCCTCAAGCCTAGCA+TGG - tig0023655:73329-73348 Msa1410480:intron 50.0%
ATACCCTCAAGCTCCTTCAC+AGG - tig0023655:73406-73425 Msa1410480:intron 50.0%
TCTCCTGTGAAGGAGCTTGA+GGG + tig0023655:73412-73431 None:intergenic 50.0%
TTCTCCTGTGAAGGAGCTTG+AGG + tig0023655:73413-73432 None:intergenic 50.0%
ATGAGAACGACACGTGCCAT+GGG + tig0023655:73661-73680 None:intergenic 50.0%
TATGAGAACGACACGTGCCA+TGG + tig0023655:73662-73681 None:intergenic 50.0%
CTGCCTGAACGTTCTCTATG+CGG + tig0023655:73727-73746 None:intergenic 50.0%
GGACACAGAAGGTTGACGGA+GGG + tig0023655:71257-71276 None:intergenic 55.0%
CAGCGGACACAGAAGGTTGA+CGG + tig0023655:71261-71280 None:intergenic 55.0%
CATCGTACAGCGGACACAGA+AGG + tig0023655:71268-71287 None:intergenic 55.0%
AGTGAGACTTGATGGAGCGG+CGG + tig0023655:71296-71315 None:intergenic 55.0%
CGCGGTCTTAACGAGCTCAT+CGG + tig0023655:71338-71357 None:intergenic 55.0%
CGATGAGCTCGTTAAGACCG+CGG - tig0023655:71336-71355 Msa1410480:CDS 55.0%
ACAATTGCGTCACCAGGTCG+TGG - tig0023655:72141-72160 Msa1410480:CDS 55.0%
CCGAAGTTAACCGCCAAGCA+TGG - tig0023655:72232-72251 Msa1410480:intron 55.0%
AGGCAAGACCGTCTAGACCT+TGG + tig0023655:72644-72663 None:intergenic 55.0%
TGGCAAAACGAGCACCTTGC+TGG + tig0023655:72686-72705 None:intergenic 55.0%
CAAGAGCAGAGGGACCATTG+GGG + tig0023655:72859-72878 None:intergenic 55.0%
GCAAGAGCAGAGGGACCATT+GGG + tig0023655:72860-72879 None:intergenic 55.0%
TGCAAGAGCAGAGGGACCAT+TGG + tig0023655:72861-72880 None:intergenic 55.0%
TCCCTCTGCTCTTGCAGTCA+AGG - tig0023655:72865-72884 Msa1410480:CDS 55.0%
TTGCAGTCAAGGAAGCAGCC+TGG - tig0023655:72876-72895 Msa1410480:CDS 55.0%
TGCAGTCAAGGAAGCAGCCT+GGG - tig0023655:72877-72896 Msa1410480:CDS 55.0%
GGGTAACCATGCTAGGCTTG+AGG + tig0023655:73338-73357 None:intergenic 55.0%
AAGCCTAGCATGGTTACCCC+AGG - tig0023655:73339-73358 Msa1410480:intron 55.0%
TGTCCTTGCACTCAGCTCCT+GGG + tig0023655:73359-73378 None:intergenic 55.0%
TTGTCCTTGCACTCAGCTCC+TGG + tig0023655:73360-73379 None:intergenic 55.0%
AGGAGCTGAGTGCAAGGACA+AGG - tig0023655:73359-73378 Msa1410480:intron 55.0%
GTCAGCAACTGTTGCAGGAG+AGG + tig0023655:73385-73404 None:intergenic 55.0%
CTGGGGGAATTCTCCTGTGA+AGG + tig0023655:73422-73441 None:intergenic 55.0%
ATGATACCAGGGACAGCTGG+GGG + tig0023655:73438-73457 None:intergenic 55.0%
CATGATACCAGGGACAGCTG+GGG + tig0023655:73439-73458 None:intergenic 55.0%
CCATGATACCAGGGACAGCT+GGG + tig0023655:73440-73459 None:intergenic 55.0%
ACCATGATACCAGGGACAGC+TGG + tig0023655:73441-73460 None:intergenic 55.0%
CGTGCCATGGGTTTGGAGAT+TGG + tig0023655:73649-73668 None:intergenic 55.0%
AACGACACGTGCCATGGGTT+TGG + tig0023655:73656-73675 None:intergenic 55.0%
!! ACCGCTTTGAAGACATGGGG+AGG - tig0023655:73701-73720 Msa1410480:CDS 55.0%
GCCTCCCCATGTCTTCAAAG+CGG + tig0023655:73705-73724 None:intergenic 55.0%
AGGCCGCATAGAGAACGTTC+AGG - tig0023655:73721-73740 Msa1410480:CDS 55.0%
CACTGGTGAGGGTGAATCTG+AGG - tig0023655:73805-73824 Msa1410480:CDS 55.0%
CGGACACAGAAGGTTGACGG+AGG + tig0023655:71258-71277 None:intergenic 60.0%
TGAGACTTGATGGAGCGGCG+GGG + tig0023655:71294-71313 None:intergenic 60.0%
GTGAGACTTGATGGAGCGGC+GGG + tig0023655:71295-71314 None:intergenic 60.0%
! GAAGGGTACGCCATGCTTGG+CGG + tig0023655:72245-72264 None:intergenic 60.0%
! CCAGAAGGGTACGCCATGCT+TGG + tig0023655:72248-72267 None:intergenic 60.0%
CCAAGCATGGCGTACCCTTC+TGG - tig0023655:72245-72264 Msa1410480:intron 60.0%
!! TAGGGTTTGGTGCCCCTTGC+TGG - tig0023655:72597-72616 Msa1410480:intron 60.0%
GCAGTCAAGGAAGCAGCCTG+GGG - tig0023655:72878-72897 Msa1410480:CDS 60.0%
GCTCCTGGGGTAACCATGCT+AGG + tig0023655:73345-73364 None:intergenic 60.0%
TACCCCAGGAGCTGAGTGCA+AGG - tig0023655:73353-73372 Msa1410480:intron 60.0%
GTCCTTGCACTCAGCTCCTG+GGG + tig0023655:73358-73377 None:intergenic 60.0%
AGAATTCCCCCAGCTGTCCC+TGG - tig0023655:73429-73448 Msa1410480:intron 60.0%
CCCAGCTGTCCCTGGTATCA+TGG - tig0023655:73437-73456 Msa1410480:intron 60.0%
CAAGGAAGCAGCCTGGGGTC+TGG - tig0023655:72883-72902 Msa1410480:CDS 65.0%
GGCGGGGCTGCATCGTACAG+CGG + tig0023655:71278-71297 None:intergenic 70.0%
AGCGTAGCGAGCCAGACCCC+AGG + tig0023655:72897-72916 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0023655 gene 70903 74155 70903 ID=Msa1410480;Name=Msa1410480
tig0023655 mRNA 70903 74155 70903 ID=Msa1410480-mRNA-1;Parent=Msa1410480;Name=Msa1410480-mRNA-1;_AED=0.29;_eAED=0.29;_QI=278|1|1|1|1|1|6|287|398
tig0023655 exon 70903 71468 70903 ID=Msa1410480-mRNA-1:exon:26601;Parent=Msa1410480-mRNA-1
tig0023655 exon 71600 71869 71600 ID=Msa1410480-mRNA-1:exon:26600;Parent=Msa1410480-mRNA-1
tig0023655 exon 72130 72220 72130 ID=Msa1410480-mRNA-1:exon:26599;Parent=Msa1410480-mRNA-1
tig0023655 exon 72349 72458 72349 ID=Msa1410480-mRNA-1:exon:26598;Parent=Msa1410480-mRNA-1
tig0023655 exon 72651 72920 72651 ID=Msa1410480-mRNA-1:exon:26597;Parent=Msa1410480-mRNA-1
tig0023655 exon 73701 74155 73701 ID=Msa1410480-mRNA-1:exon:26596;Parent=Msa1410480-mRNA-1
tig0023655 five_prime_UTR 73878 74155 73878 ID=Msa1410480-mRNA-1:five_prime_utr;Parent=Msa1410480-mRNA-1
tig0023655 CDS 73701 73877 73701 ID=Msa1410480-mRNA-1:cds;Parent=Msa1410480-mRNA-1
tig0023655 CDS 72651 72920 72651 ID=Msa1410480-mRNA-1:cds;Parent=Msa1410480-mRNA-1
tig0023655 CDS 72349 72458 72349 ID=Msa1410480-mRNA-1:cds;Parent=Msa1410480-mRNA-1
tig0023655 CDS 72130 72220 72130 ID=Msa1410480-mRNA-1:cds;Parent=Msa1410480-mRNA-1
tig0023655 CDS 71600 71869 71600 ID=Msa1410480-mRNA-1:cds;Parent=Msa1410480-mRNA-1
tig0023655 CDS 71190 71468 71190 ID=Msa1410480-mRNA-1:cds;Parent=Msa1410480-mRNA-1
tig0023655 three_prime_UTR 70903 71189 70903 ID=Msa1410480-mRNA-1:three_prime_utr;Parent=Msa1410480-mRNA-1
Gene Sequence

>Msa1410480

ATGGCCTCTGCATCAGCATCTCTTTTCAAGTCGTCGATTGTTCTTGACAAGTCTGAATGGGTGAAGGGACAGACCCTCCGTCAACCTTCTGTGTCCGCTGTACGATGCAGCCCCGCCGCTCCATCAAGTCTCACTATCAGAGCTGGTTCTTATGCCGATGAGCTCGTTAAGACCGCGAAAACAATTGCGTCACCAGGTCGTGGTATTTTGGCCATGGATGAGTCCAATGCTACTTGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAACACCGAAGTTAACCGCCAAGCATGGCGTACCCTTCTGGTGACAGTTCCATCTCTTGGAGAGTACATCTCTGGTGCCATTCTCTTTGAGGAGACTCTCTACCAATCCACAACAGATGGAAGGAAGATTGTCGATGTACTTATTGAGCAAAACATTGTTCCTGGTATCAAAGTTGACAAGGGTTTGGTGCCCCTTGCTGGTTCCAATGATGAGTCATGGTGCCAAGGTCTAGACGGTCTTGCCTCTCGTTCAGCTGCATACTACCAGCAAGGTGCTCGTTTTGCCAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTTGCAGTCAAGGAAGCAGCCTGGGGTCTGGCTCGCTACGCTGCAATTAGTCAGGACAACGGATTGGTCCCAATTGTGGAACCAGAGATCTTGCTTGATGGAGAACATGGTATTGACAGAACTTTTGAAGTAGCACAAAAGGTTTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCAATTTGAGGGCATTCTCCTCAAGCCTAGCATGGTTACCCCAGGAGCTGAGTGCAAGGACAAGGCCTCTCCTGCAACAGTTGCTGACTATACCCTCAAGCTCCTTCACAGGAGAATTCCCCCAGCTGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAATGCCATGAACCAATCTCCAAACCCATGGCACGTGTCGTTCTCATATGCAAGAGCTCTCCAAAACACCGCTTTGAAGACATGGGGAGGCCGCATAGAGAACGTTCAGGCAGCACAAGAAGCACTCCTTTTCCGTGCTAAGTCCAACTCAATTGCTCAACTTGGAAAGTACACTGGTGAGGGTGAATCTGAGGAAGCCAAGAAGGAATTGTTTGTCAAAGGATACTCTTATTAA

Protein sequence

>Msa1410480

MASASASLFKSSIVLDKSEWVKGQTLRQPSVSAVRCSPAAPSSLTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPSLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFFYLAENNVQFEGILLKPSMVTPGAECKDKASPATVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRIENVQAAQEALLFRAKSNSIAQLGKYTGEGESEEAKKELFVKGYSY*