Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030280 | sp|P32294|AX22B_VIGRR | 70.833 | 192 | 42 | 3 | 1 | 178 | 1 | 192 | 5.91e-95 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0030280 | TR | AUX/IAA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa0030280 | 0.800753 | 1.242928e-48 | -8.615850e-47 |
| Msa0006880 | Msa0030280 | 0.800377 | 1.483063e-48 | -8.615850e-47 |
| Msa0008220 | Msa0030280 | 0.801707 | 7.928907e-49 | -8.615850e-47 |
| Msa0011930 | Msa0030280 | 0.817110 | 3.908244e-52 | -8.615850e-47 |
| Msa0012940 | Msa0030280 | 0.802544 | 5.335859e-49 | -8.615850e-47 |
| Msa0014570 | Msa0030280 | 0.810855 | 9.367187e-51 | -8.615850e-47 |
| Msa0017390 | Msa0030280 | 0.804394 | 2.206533e-49 | -8.615850e-47 |
| Msa0030280 | Msa0031820 | 0.820050 | 8.417094e-53 | -8.615850e-47 |
| Msa0030280 | Msa0032320 | 0.823895 | 1.082546e-53 | -8.615850e-47 |
| Msa0030280 | Msa0039250 | 0.837229 | 5.878443e-57 | -8.615850e-47 |
| Msa0030280 | Msa0041690 | 0.805811 | 1.114897e-49 | -8.615850e-47 |
| Msa0030280 | Msa0047280 | 0.807100 | 5.960692e-50 | -8.615850e-47 |
| Msa0030280 | Msa0052610 | 0.817952 | 2.525214e-52 | -8.615850e-47 |
| Msa0030280 | Msa0057370 | 0.802319 | 5.934663e-49 | -8.615850e-47 |
| Msa0030280 | Msa0057590 | 0.814580 | 1.432824e-51 | -8.615850e-47 |
| Msa0030280 | Msa0057610 | 0.829240 | 5.749108e-55 | -8.615850e-47 |
| Msa0030280 | Msa0057710 | 0.810608 | 1.059374e-50 | -8.615850e-47 |
| Msa0030280 | Msa0070430 | 0.811437 | 7.005608e-51 | -8.615850e-47 |
| Msa0030280 | Msa0077880 | 0.956078 | 6.872313e-114 | -8.615850e-47 |
| Msa0030280 | Msa0094010 | 0.819592 | 1.071371e-52 | -8.615850e-47 |
| Msa0030280 | Msa0097850 | 0.835145 | 1.989226e-56 | -8.615850e-47 |
| Msa0030280 | Msa0097950 | 0.803934 | 2.750291e-49 | -8.615850e-47 |
| Msa0030280 | Msa0098470 | 0.819401 | 1.183870e-52 | -8.615850e-47 |
| Msa0030280 | Msa0100800 | 0.816958 | 4.227642e-52 | -8.615850e-47 |
| Msa0030280 | Msa0101180 | 0.804395 | 2.205200e-49 | -8.615850e-47 |
| Msa0030280 | Msa0101880 | 0.814822 | 1.266687e-51 | -8.615850e-47 |
| Msa0030280 | Msa0103240 | 0.809583 | 1.761525e-50 | -8.615850e-47 |
| Msa0030280 | Msa0108870 | 0.830407 | 2.989154e-55 | -8.615850e-47 |
| Msa0030280 | Msa0109050 | 0.800546 | 1.370172e-48 | -8.615850e-47 |
| Msa0030280 | Msa0115090 | 0.817703 | 2.873181e-52 | -8.615850e-47 |
| Msa0030280 | Msa0116790 | 0.810643 | 1.040820e-50 | -8.615850e-47 |
| Msa0030280 | Msa0118000 | 0.813832 | 2.096654e-51 | -8.615850e-47 |
| Msa0030280 | Msa0125770 | 0.882029 | 1.466608e-70 | -8.615850e-47 |
| Msa0030280 | Msa0126770 | 0.834524 | 2.852247e-56 | -8.615850e-47 |
| Msa0030280 | Msa0130240 | 0.815747 | 7.890078e-52 | -8.615850e-47 |
| Msa0030280 | Msa0133720 | 0.841345 | 5.026671e-58 | -8.615850e-47 |
| Msa0030280 | Msa0133820 | 0.838726 | 2.423564e-57 | -8.615850e-47 |
| Msa0030280 | Msa0134000 | 0.829184 | 5.934025e-55 | -8.615850e-47 |
| Msa0030280 | Msa0138360 | 0.807993 | 3.852260e-50 | -8.615850e-47 |
| Msa0030280 | Msa0139990 | 0.806661 | 7.380356e-50 | -8.615850e-47 |
| Msa0030280 | Msa0144360 | 0.801363 | 9.326003e-49 | -8.615850e-47 |
| Msa0030280 | Msa0145070 | 0.803872 | 2.832713e-49 | -8.615850e-47 |
| Msa0030280 | Msa0145150 | 0.817192 | 3.745246e-52 | -8.615850e-47 |
| Msa0030280 | Msa0147980 | 0.819471 | 1.141626e-52 | -8.615850e-47 |
| Msa0030280 | Msa0154440 | 0.816312 | 5.900942e-52 | -8.615850e-47 |
| Msa0030280 | Msa0160670 | 0.802323 | 5.925091e-49 | -8.615850e-47 |
| Msa0030280 | Msa0165270 | 0.806894 | 6.590865e-50 | -8.615850e-47 |
| Msa0030280 | Msa0165300 | 0.800503 | 1.397738e-48 | -8.615850e-47 |
| Msa0030280 | Msa0165440 | 0.830165 | 3.424698e-55 | -8.615850e-47 |
| Msa0030280 | Msa0170410 | 0.875546 | 2.830173e-68 | -8.615850e-47 |
| Msa0030280 | Msa0171850 | 0.845873 | 3.095543e-59 | -8.615850e-47 |
| Msa0030280 | Msa0174000 | 0.805775 | 1.134080e-49 | -8.615850e-47 |
| Msa0030280 | Msa0181000 | 0.825046 | 5.801795e-54 | -8.615850e-47 |
| Msa0030280 | Msa0181230 | 0.839166 | 1.864596e-57 | -8.615850e-47 |
| Msa0030280 | Msa0187030 | 0.808080 | 3.691625e-50 | -8.615850e-47 |
| Msa0030280 | Msa0198520 | 0.824599 | 7.398663e-54 | -8.615850e-47 |
| Msa0030280 | Msa0198530 | 0.809531 | 1.806766e-50 | -8.615850e-47 |
| Msa0030280 | Msa0207350 | 0.835028 | 2.129352e-56 | -8.615850e-47 |
| Msa0030280 | Msa0221600 | 0.808249 | 3.397793e-50 | -8.615850e-47 |
| Msa0030280 | Msa0226460 | 0.817617 | 3.005810e-52 | -8.615850e-47 |
| Msa0030280 | Msa0230150 | 0.822287 | 2.567499e-53 | -8.615850e-47 |
| Msa0030280 | Msa0238230 | 0.823286 | 1.503102e-53 | -8.615850e-47 |
| Msa0030280 | Msa0241830 | 0.809730 | 1.637652e-50 | -8.615850e-47 |
| Msa0030280 | Msa0259160 | 0.802394 | 5.727960e-49 | -8.615850e-47 |
| Msa0030280 | Msa0296250 | 0.812325 | 4.488457e-51 | -8.615850e-47 |
| Msa0030280 | Msa0298950 | 0.818207 | 2.210497e-52 | -8.615850e-47 |
| Msa0030280 | Msa0311060 | 0.806209 | 9.190764e-50 | -8.615850e-47 |
| Msa0030280 | Msa0318720 | 0.802891 | 4.524196e-49 | -8.615850e-47 |
| Msa0030280 | Msa0322900 | 0.806651 | 7.418245e-50 | -8.615850e-47 |
| Msa0030280 | Msa0346990 | 0.815958 | 7.078434e-52 | -8.615850e-47 |
| Msa0030280 | Msa0358670 | 0.814258 | 1.688152e-51 | -8.615850e-47 |
| Msa0030280 | Msa0363060 | 0.812899 | 3.361118e-51 | -8.615850e-47 |
| Msa0030280 | Msa0363810 | 0.801308 | 9.572874e-49 | -8.615850e-47 |
| Msa0030280 | Msa0367470 | 0.802945 | 4.408258e-49 | -8.615850e-47 |
| Msa0030280 | Msa0384670 | 0.819249 | 1.282451e-52 | -8.615850e-47 |
| Msa0030280 | Msa0392200 | 0.811697 | 6.148755e-51 | -8.615850e-47 |
| Msa0030280 | Msa0411410 | 0.813071 | 3.080776e-51 | -8.615850e-47 |
| Msa0030280 | Msa0431770 | 0.836503 | 9.009575e-57 | -8.615850e-47 |
| Msa0030280 | Msa0434570 | 0.818563 | 1.836680e-52 | -8.615850e-47 |
| Msa0030280 | Msa0434770 | 0.823962 | 1.044222e-53 | -8.615850e-47 |
| Msa0030280 | Msa0437510 | 0.836301 | 1.014206e-56 | -8.615850e-47 |
| Msa0030280 | Msa0451070 | 0.815490 | 8.999430e-52 | -8.615850e-47 |
| Msa0030280 | Msa0462880 | 0.802411 | 5.681453e-49 | -8.615850e-47 |
| Msa0030280 | Msa0467100 | 0.817442 | 3.290793e-52 | -8.615850e-47 |
| Msa0030280 | Msa0474700 | 0.803193 | 3.917092e-49 | -8.615850e-47 |
| Msa0030280 | Msa0478580 | 0.815954 | 7.094487e-52 | -8.615850e-47 |
| Msa0030280 | Msa0479200 | 0.817383 | 3.393819e-52 | -8.615850e-47 |
| Msa0030280 | Msa0498450 | 0.803016 | 4.262811e-49 | -8.615850e-47 |
| Msa0030280 | Msa0506940 | 0.807398 | 5.153132e-50 | -8.615850e-47 |
| Msa0030280 | Msa0510290 | 0.800551 | 1.366694e-48 | -8.615850e-47 |
| Msa0030280 | Msa0511770 | 0.802309 | 5.963785e-49 | -8.615850e-47 |
| Msa0030280 | Msa0518030 | 0.801552 | 8.530730e-49 | -8.615850e-47 |
| Msa0030280 | Msa0527910 | 0.807750 | 4.339165e-50 | -8.615850e-47 |
| Msa0030280 | Msa0545060 | 0.816776 | 4.645445e-52 | -8.615850e-47 |
| Msa0030280 | Msa0547990 | 0.803285 | 3.749141e-49 | -8.615850e-47 |
| Msa0030280 | Msa0556010 | 0.822310 | 2.537262e-53 | -8.615850e-47 |
| Msa0030280 | Msa0561430 | 0.803293 | 3.734829e-49 | -8.615850e-47 |
| Msa0030280 | Msa0576680 | 0.804751 | 1.858217e-49 | -8.615850e-47 |
| Msa0030280 | Msa0578090 | 0.835304 | 1.813608e-56 | -8.615850e-47 |
| Msa0030280 | Msa0581690 | 0.847499 | 1.112868e-59 | -8.615850e-47 |
| Msa0030280 | Msa0583500 | 0.812901 | 3.356850e-51 | -8.615850e-47 |
| Msa0030280 | Msa0584550 | 0.847717 | 9.693325e-60 | -8.615850e-47 |
| Msa0030280 | Msa0585920 | 0.800670 | 1.292266e-48 | -8.615850e-47 |
| Msa0030280 | Msa0586850 | 0.819053 | 1.421228e-52 | -8.615850e-47 |
| Msa0030280 | Msa0593700 | 0.810758 | 9.830886e-51 | -8.615850e-47 |
| Msa0030280 | Msa0599900 | 0.806670 | 7.350420e-50 | -8.615850e-47 |
| Msa0030280 | Msa0602370 | 0.802027 | 6.815724e-49 | -8.615850e-47 |
| Msa0030280 | Msa0610090 | 0.809454 | 1.876944e-50 | -8.615850e-47 |
| Msa0030280 | Msa0619180 | 0.819229 | 1.296074e-52 | -8.615850e-47 |
| Msa0030280 | Msa0619510 | 0.819447 | 1.155747e-52 | -8.615850e-47 |
| Msa0030280 | Msa0619920 | 0.806166 | 9.387178e-50 | -8.615850e-47 |
| Msa0030280 | Msa0626680 | 0.806927 | 6.485044e-50 | -8.615850e-47 |
| Msa0030280 | Msa0633760 | 0.813599 | 2.358807e-51 | -8.615850e-47 |
| Msa0030280 | Msa0640500 | 0.845508 | 3.887836e-59 | -8.615850e-47 |
| Msa0030280 | Msa0644030 | 0.800717 | 1.264057e-48 | -8.615850e-47 |
| Msa0030280 | Msa0647430 | 0.808929 | 2.432366e-50 | -8.615850e-47 |
| Msa0030280 | Msa0648520 | 0.807806 | 4.223070e-50 | -8.615850e-47 |
| Msa0030280 | Msa0651150 | 0.802829 | 4.658119e-49 | -8.615850e-47 |
| Msa0030280 | Msa0658480 | 0.801684 | 8.015231e-49 | -8.615850e-47 |
| Msa0030280 | Msa0659600 | 0.818462 | 1.935608e-52 | -8.615850e-47 |
| Msa0030280 | Msa0659990 | 0.819022 | 1.444224e-52 | -8.615850e-47 |
| Msa0030280 | Msa0664760 | 0.827080 | 1.905994e-54 | -8.615850e-47 |
| Msa0030280 | Msa0679100 | 0.845273 | 4.500912e-59 | -8.615850e-47 |
| Msa0030280 | Msa0687230 | 0.809289 | 2.036434e-50 | -8.615850e-47 |
| Msa0030280 | Msa0704800 | 0.804720 | 1.886561e-49 | -8.615850e-47 |
| Msa0030280 | Msa0716410 | 0.802783 | 4.762478e-49 | -8.615850e-47 |
| Msa0030280 | Msa0716860 | 0.807852 | 4.127824e-50 | -8.615850e-47 |
| Msa0030280 | Msa0730640 | 0.805358 | 1.387102e-49 | -8.615850e-47 |
| Msa0030280 | Msa0742510 | 0.844157 | 8.996789e-59 | -8.615850e-47 |
| Msa0030280 | Msa0743530 | 0.801576 | 8.434902e-49 | -8.615850e-47 |
| Msa0030280 | Msa0744090 | 0.823869 | 1.098113e-53 | -8.615850e-47 |
| Msa0030280 | Msa0744100 | 0.814497 | 1.494936e-51 | -8.615850e-47 |
| Msa0030280 | Msa0753770 | 0.816977 | 4.186961e-52 | -8.615850e-47 |
| Msa0030280 | Msa0756530 | 0.800331 | 1.515446e-48 | -8.615850e-47 |
| Msa0030280 | Msa0757800 | 0.800605 | 1.332386e-48 | -8.615850e-47 |
| Msa0030280 | Msa0774750 | 0.802412 | 5.680945e-49 | -8.615850e-47 |
| Msa0030280 | Msa0779550 | 0.843373 | 1.458147e-58 | -8.615850e-47 |
| Msa0030280 | Msa0780930 | 0.800517 | 1.388680e-48 | -8.615850e-47 |
| Msa0030280 | Msa0788110 | 0.814832 | 1.260190e-51 | -8.615850e-47 |
| Msa0030280 | Msa0795660 | 0.830667 | 2.580620e-55 | -8.615850e-47 |
| Msa0030280 | Msa0798810 | -0.802274 | 6.063606e-49 | -8.615850e-47 |
| Msa0030280 | Msa0799000 | 0.804549 | 2.048397e-49 | -8.615850e-47 |
| Msa0030280 | Msa0800270 | 0.804894 | 1.735307e-49 | -8.615850e-47 |
| Msa0030280 | Msa0814630 | -0.801641 | 8.182906e-49 | -8.615850e-47 |
| Msa0030280 | Msa0818170 | 0.805020 | 1.633168e-49 | -8.615850e-47 |
| Msa0030280 | Msa0818770 | 0.814712 | 1.339518e-51 | -8.615850e-47 |
| Msa0030280 | Msa0819540 | 0.833205 | 6.095659e-56 | -8.615850e-47 |
| Msa0030280 | Msa0822170 | 0.804156 | 2.473318e-49 | -8.615850e-47 |
| Msa0030280 | Msa0824640 | 0.800196 | 1.614385e-48 | -8.615850e-47 |
| Msa0030280 | Msa0825270 | 0.819424 | 1.169902e-52 | -8.615850e-47 |
| Msa0030280 | Msa0825280 | 0.826398 | 2.773395e-54 | -8.615850e-47 |
| Msa0030280 | Msa0838260 | 0.813445 | 2.549883e-51 | -8.615850e-47 |
| Msa0030280 | Msa0851470 | 0.819408 | 1.180001e-52 | -8.615850e-47 |
| Msa0030280 | Msa0862650 | 0.812527 | 4.053137e-51 | -8.615850e-47 |
| Msa0030280 | Msa0864010 | 0.806873 | 6.659044e-50 | -8.615850e-47 |
| Msa0030280 | Msa0869010 | 0.807356 | 5.260672e-50 | -8.615850e-47 |
| Msa0030280 | Msa0870650 | 0.808862 | 2.514142e-50 | -8.615850e-47 |
| Msa0030280 | Msa0895310 | 0.813935 | 1.989178e-51 | -8.615850e-47 |
| Msa0030280 | Msa0937020 | 0.808678 | 2.751835e-50 | -8.615850e-47 |
| Msa0030280 | Msa0947530 | -0.832053 | 1.177380e-55 | -8.615850e-47 |
| Msa0030280 | Msa0955190 | 0.830689 | 2.549518e-55 | -8.615850e-47 |
| Msa0030280 | Msa0963020 | 0.818285 | 2.122756e-52 | -8.615850e-47 |
| Msa0030280 | Msa0970320 | 0.810479 | 1.129148e-50 | -8.615850e-47 |
| Msa0030280 | Msa0973320 | 0.805017 | 1.635164e-49 | -8.615850e-47 |
| Msa0030280 | Msa0975940 | 0.802357 | 5.829282e-49 | -8.615850e-47 |
| Msa0030280 | Msa0981430 | 0.803410 | 3.532688e-49 | -8.615850e-47 |
| Msa0030280 | Msa0990590 | 0.801541 | 8.576324e-49 | -8.615850e-47 |
| Msa0030280 | Msa1000930 | 0.805557 | 1.260463e-49 | -8.615850e-47 |
| Msa0030280 | Msa1004420 | 0.817670 | 2.923278e-52 | -8.615850e-47 |
| Msa0030280 | Msa1005820 | 0.803540 | 3.320127e-49 | -8.615850e-47 |
| Msa0030280 | Msa1033660 | 0.801737 | 7.818805e-49 | -8.615850e-47 |
| Msa0030280 | Msa1035930 | 0.806989 | 6.291624e-50 | -8.615850e-47 |
| Msa0030280 | Msa1040840 | 0.803629 | 3.181766e-49 | -8.615850e-47 |
| Msa0030280 | Msa1050700 | 0.800468 | 1.420854e-48 | -8.615850e-47 |
| Msa0030280 | Msa1051330 | 0.808845 | 2.535322e-50 | -8.615850e-47 |
| Msa0030280 | Msa1051600 | 0.814433 | 1.544646e-51 | -8.615850e-47 |
| Msa0030280 | Msa1070390 | 0.810314 | 1.225641e-50 | -8.615850e-47 |
| Msa0030280 | Msa1073490 | 0.810798 | 9.636777e-51 | -8.615850e-47 |
| Msa0030280 | Msa1076560 | 0.807984 | 3.868937e-50 | -8.615850e-47 |
| Msa0030280 | Msa1083880 | 0.823659 | 1.229870e-53 | -8.615850e-47 |
| Msa0030280 | Msa1093330 | 0.804286 | 2.323186e-49 | -8.615850e-47 |
| Msa0030280 | Msa1097820 | 0.802670 | 5.025345e-49 | -8.615850e-47 |
| Msa0030280 | Msa1098890 | 0.815696 | 8.099627e-52 | -8.615850e-47 |
| Msa0030280 | Msa1114040 | 0.821670 | 3.568857e-53 | -8.615850e-47 |
| Msa0030280 | Msa1127540 | 0.800628 | 1.318250e-48 | -8.615850e-47 |
| Msa0030280 | Msa1131560 | 0.801574 | 8.444939e-49 | -8.615850e-47 |
| Msa0030280 | Msa1145240 | 0.809927 | 1.485785e-50 | -8.615850e-47 |
| Msa0030280 | Msa1152510 | 0.803565 | 3.280605e-49 | -8.615850e-47 |
| Msa0030280 | Msa1158770 | 0.801489 | 8.788040e-49 | -8.615850e-47 |
| Msa0030280 | Msa1160310 | 0.823013 | 1.740221e-53 | -8.615850e-47 |
| Msa0030280 | Msa1169720 | 0.807983 | 3.871325e-50 | -8.615850e-47 |
| Msa0030280 | Msa1173900 | 0.800989 | 1.112734e-48 | -8.615850e-47 |
| Msa0030280 | Msa1182770 | 0.808152 | 3.564183e-50 | -8.615850e-47 |
| Msa0030280 | Msa1186530 | 0.800037 | 1.738883e-48 | -8.615850e-47 |
| Msa0030280 | Msa1188560 | 0.831747 | 1.401129e-55 | -8.615850e-47 |
| Msa0030280 | Msa1192850 | 0.802645 | 5.086132e-49 | -8.615850e-47 |
| Msa0030280 | Msa1198880 | 0.836866 | 7.279524e-57 | -8.615850e-47 |
| Msa0030280 | Msa1201810 | 0.824670 | 7.118526e-54 | -8.615850e-47 |
| Msa0030280 | Msa1205850 | 0.804938 | 1.698838e-49 | -8.615850e-47 |
| Msa0030280 | Msa1207730 | 0.802119 | 6.526564e-49 | -8.615850e-47 |
| Msa0030280 | Msa1211050 | -0.801260 | 9.791269e-49 | -8.615850e-47 |
| Msa0030280 | Msa1211340 | 0.804938 | 1.698838e-49 | -8.615850e-47 |
| Msa0030280 | Msa1214320 | 0.806119 | 9.601629e-50 | -8.615850e-47 |
| Msa0030280 | Msa1223330 | 0.835404 | 1.711439e-56 | -8.615850e-47 |
| Msa0030280 | Msa1226610 | 0.807927 | 3.980024e-50 | -8.615850e-47 |
| Msa0030280 | Msa1235250 | 0.810906 | 9.129169e-51 | -8.615850e-47 |
| Msa0030280 | Msa1242640 | 0.807270 | 5.485577e-50 | -8.615850e-47 |
| Msa0030280 | Msa1252850 | -0.830631 | 2.634500e-55 | -8.615850e-47 |
| Msa0030280 | Msa1253810 | 0.831327 | 1.777933e-55 | -8.615850e-47 |
| Msa0030280 | Msa1259640 | 0.805204 | 1.494709e-49 | -8.615850e-47 |
| Msa0030280 | Msa1262960 | 0.806251 | 9.005149e-50 | -8.615850e-47 |
| Msa0030280 | Msa1279140 | -0.824495 | 7.827450e-54 | -8.615850e-47 |
| Msa0030280 | Msa1294960 | 0.808160 | 3.550305e-50 | -8.615850e-47 |
| Msa0030280 | Msa1296300 | 0.810637 | 1.043761e-50 | -8.615850e-47 |
| Msa0030280 | Msa1299330 | 0.822473 | 2.324553e-53 | -8.615850e-47 |
| Msa0030280 | Msa1299700 | 0.814071 | 1.856406e-51 | -8.615850e-47 |
| Msa0030280 | Msa1302060 | 0.820041 | 8.458817e-53 | -8.615850e-47 |
| Msa0030280 | Msa1311960 | 0.818243 | 2.170095e-52 | -8.615850e-47 |
| Msa0030280 | Msa1320820 | 0.816393 | 5.660932e-52 | -8.615850e-47 |
| Msa0030280 | Msa1323990 | 0.803827 | 2.894538e-49 | -8.615850e-47 |
| Msa0030280 | Msa1329450 | 0.831103 | 2.017319e-55 | -8.615850e-47 |
| Msa0030280 | Msa1329790 | 0.804415 | 2.183979e-49 | -8.615850e-47 |
| Msa0030280 | Msa1332220 | 0.804144 | 2.487236e-49 | -8.615850e-47 |
| Msa0030280 | Msa1333890 | 0.817861 | 2.647474e-52 | -8.615850e-47 |
| Msa0030280 | Msa1333970 | 0.808249 | 3.398341e-50 | -8.615850e-47 |
| Msa0030280 | Msa1338830 | 0.804900 | 1.730013e-49 | -8.615850e-47 |
| Msa0030280 | Msa1340510 | 0.800455 | 1.429478e-48 | -8.615850e-47 |
| Msa0030280 | Msa1344310 | 0.817069 | 3.992324e-52 | -8.615850e-47 |
| Msa0030280 | Msa1372310 | 0.808939 | 2.420321e-50 | -8.615850e-47 |
| Msa0030280 | Msa1373820 | 0.828452 | 8.920931e-55 | -8.615850e-47 |
| Msa0030280 | Msa1373880 | 0.804345 | 2.259240e-49 | -8.615850e-47 |
| Msa0030280 | Msa1380970 | 0.827433 | 1.568631e-54 | -8.615850e-47 |
| Msa0030280 | Msa1390230 | 0.813903 | 2.022480e-51 | -8.615850e-47 |
| Msa0030280 | Msa1411950 | 0.804124 | 2.510913e-49 | -8.615850e-47 |
| Msa0030280 | Msa1422910 | 0.824764 | 6.762900e-54 | -8.615850e-47 |
| Msa0030280 | Msa1424780 | 0.817339 | 3.471793e-52 | -8.615850e-47 |
| Msa0030280 | Msa1433600 | 0.815401 | 9.419519e-52 | -8.615850e-47 |
| Msa0030280 | Msa1443930 | 0.809241 | 2.085123e-50 | -8.615850e-47 |
| Msa0030280 | Msa1449910 | 0.838586 | 2.633702e-57 | -8.615850e-47 |
| Msa0030280 | Msa1461490 | 0.801549 | 8.542848e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030280 | MtrunA17_Chr1g0187961 | 98.315 | 178 | 3 | 0 | 1 | 178 | 1 | 178 | 5.70e-129 | 359 |
| Msa0030280 | MtrunA17_Chr1g0166011 | 73.626 | 182 | 34 | 3 | 11 | 178 | 1 | 182 | 3.92e-92 | 266 |
| Msa0030280 | MtrunA17_Chr1g0184801 | 59.701 | 201 | 58 | 5 | 1 | 178 | 1 | 201 | 4.75e-80 | 236 |
| Msa0030280 | MtrunA17_Chr7g0260621 | 56.477 | 193 | 57 | 5 | 11 | 178 | 11 | 201 | 2.02e-72 | 217 |
| Msa0030280 | MtrunA17_Chr6g0486121 | 42.609 | 230 | 72 | 5 | 9 | 178 | 13 | 242 | 4.09e-53 | 169 |
| Msa0030280 | MtrunA17_Chr1g0187921 | 45.161 | 217 | 70 | 6 | 11 | 178 | 8 | 224 | 6.12e-51 | 163 |
| Msa0030280 | MtrunA17_Chr1g0190711 | 42.291 | 227 | 72 | 6 | 11 | 178 | 15 | 241 | 1.74e-49 | 160 |
| Msa0030280 | MtrunA17_Chr7g0260641 | 53.642 | 151 | 44 | 4 | 53 | 178 | 89 | 238 | 3.90e-48 | 156 |
| Msa0030280 | MtrunA17_Chr5g0411501 | 45.304 | 181 | 68 | 4 | 29 | 178 | 143 | 323 | 9.85e-48 | 158 |
| Msa0030280 | MtrunA17_Chr1g0184791 | 41.441 | 222 | 65 | 6 | 16 | 178 | 18 | 233 | 1.47e-46 | 152 |
| Msa0030280 | MtrunA17_Chr8g0366881 | 47.159 | 176 | 64 | 5 | 29 | 178 | 164 | 336 | 1.10e-45 | 153 |
| Msa0030280 | MtrunA17_Chr5g0428141 | 47.126 | 174 | 62 | 5 | 30 | 178 | 167 | 335 | 1.27e-45 | 153 |
| Msa0030280 | MtrunA17_Chr2g0331411 | 53.020 | 149 | 43 | 4 | 57 | 178 | 166 | 314 | 1.87e-45 | 152 |
| Msa0030280 | MtrunA17_Chr8g0390281 | 47.802 | 182 | 66 | 6 | 26 | 178 | 100 | 281 | 5.80e-44 | 147 |
| Msa0030280 | MtrunA17_Chr4g0004181 | 47.337 | 169 | 80 | 4 | 11 | 178 | 6 | 166 | 7.19e-42 | 138 |
| Msa0030280 | MtrunA17_Chr2g0332141 | 58.065 | 93 | 30 | 3 | 87 | 170 | 8 | 100 | 4.73e-30 | 106 |
| Msa0030280 | MtrunA17_Chr1g0183251 | 33.333 | 177 | 57 | 4 | 62 | 178 | 81 | 256 | 2.38e-26 | 101 |
| Msa0030280 | MtrunA17_Chr4g0069561 | 37.984 | 129 | 77 | 2 | 48 | 175 | 58 | 184 | 3.78e-25 | 95.9 |
| Msa0030280 | MtrunA17_Chr8g0340731 | 36.420 | 162 | 57 | 5 | 55 | 174 | 103 | 260 | 3.80e-25 | 97.8 |
| Msa0030280 | MtrunA17_Chr2g0330951 | 32.558 | 172 | 67 | 3 | 50 | 174 | 85 | 254 | 1.39e-24 | 96.7 |
| Msa0030280 | MtrunA17_Chr1g0193861 | 43.820 | 89 | 49 | 1 | 84 | 171 | 82 | 170 | 1.31e-19 | 81.3 |
| Msa0030280 | MtrunA17_Chr7g0270851 | 40.426 | 94 | 55 | 1 | 79 | 171 | 62 | 155 | 9.66e-19 | 78.6 |
| Msa0030280 | MtrunA17_Chr3g0137601 | 31.538 | 130 | 69 | 3 | 64 | 178 | 89 | 213 | 1.26e-18 | 79.7 |
| Msa0030280 | MtrunA17_Chr4g0064131 | 30.579 | 121 | 63 | 3 | 64 | 171 | 93 | 205 | 2.72e-16 | 73.2 |
| Msa0030280 | MtrunA17_Chr1g0209181 | 37.607 | 117 | 62 | 4 | 64 | 171 | 54 | 168 | 2.26e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030280 | AT1G04240.1 | 61.326 | 181 | 57 | 4 | 11 | 178 | 5 | 185 | 2.36e-77 | 229 |
| Msa0030280 | AT1G04240.2 | 61.326 | 181 | 57 | 4 | 11 | 178 | 105 | 285 | 1.25e-76 | 231 |
| Msa0030280 | AT5G43700.1 | 62.295 | 183 | 62 | 3 | 1 | 178 | 1 | 181 | 1.65e-76 | 227 |
| Msa0030280 | AT3G23030.1 | 60.112 | 178 | 53 | 4 | 5 | 175 | 1 | 167 | 7.62e-69 | 207 |
| Msa0030280 | AT3G23030.2 | 59.777 | 179 | 54 | 4 | 4 | 175 | 87 | 254 | 2.28e-68 | 209 |
| Msa0030280 | AT4G14560.1 | 61.677 | 167 | 57 | 3 | 9 | 175 | 5 | 164 | 2.42e-65 | 198 |
| Msa0030280 | AT3G04730.1 | 45.089 | 224 | 66 | 6 | 11 | 178 | 2 | 224 | 1.80e-53 | 170 |
| Msa0030280 | AT4G14550.2 | 45.833 | 216 | 69 | 7 | 11 | 178 | 1 | 216 | 1.08e-52 | 168 |
| Msa0030280 | AT4G14550.1 | 46.759 | 216 | 67 | 8 | 11 | 178 | 1 | 216 | 1.54e-52 | 167 |
| Msa0030280 | AT3G23050.1 | 44.889 | 225 | 67 | 8 | 11 | 178 | 6 | 230 | 2.31e-51 | 165 |
| Msa0030280 | AT1G04250.1 | 43.256 | 215 | 73 | 5 | 10 | 178 | 6 | 217 | 8.85e-51 | 163 |
| Msa0030280 | AT4G29080.1 | 42.248 | 258 | 61 | 8 | 9 | 178 | 36 | 293 | 1.36e-50 | 165 |
| Msa0030280 | AT3G15540.1 | 45.989 | 187 | 76 | 5 | 11 | 177 | 6 | 187 | 4.64e-45 | 147 |
| Msa0030280 | AT1G15580.1 | 49.419 | 172 | 70 | 6 | 9 | 177 | 6 | 163 | 7.29e-44 | 143 |
| Msa0030280 | AT2G22670.5 | 47.468 | 158 | 56 | 4 | 48 | 178 | 150 | 307 | 2.35e-42 | 144 |
| Msa0030280 | AT2G22670.2 | 47.468 | 158 | 56 | 4 | 48 | 178 | 150 | 307 | 2.35e-42 | 144 |
| Msa0030280 | AT2G22670.3 | 47.468 | 158 | 56 | 4 | 48 | 178 | 150 | 307 | 2.71e-42 | 144 |
| Msa0030280 | AT2G22670.1 | 47.468 | 158 | 56 | 4 | 48 | 178 | 150 | 307 | 2.71e-42 | 144 |
| Msa0030280 | AT2G22670.4 | 47.468 | 158 | 56 | 4 | 48 | 178 | 167 | 324 | 2.89e-42 | 144 |
| Msa0030280 | AT1G52830.1 | 45.556 | 180 | 83 | 5 | 11 | 177 | 6 | 183 | 3.33e-42 | 140 |
| Msa0030280 | AT5G65670.1 | 50.345 | 145 | 46 | 4 | 60 | 178 | 180 | 324 | 2.49e-41 | 142 |
| Msa0030280 | AT5G65670.2 | 50.345 | 145 | 46 | 4 | 60 | 178 | 180 | 324 | 3.02e-41 | 142 |
| Msa0030280 | AT4G14550.3 | 43.590 | 195 | 62 | 8 | 11 | 157 | 1 | 195 | 5.03e-40 | 134 |
| Msa0030280 | AT3G23050.2 | 41.463 | 205 | 63 | 8 | 11 | 158 | 6 | 210 | 2.34e-38 | 130 |
| Msa0030280 | AT4G28640.1 | 39.881 | 168 | 63 | 5 | 48 | 177 | 73 | 240 | 1.79e-30 | 111 |
| Msa0030280 | AT4G28640.3 | 39.881 | 168 | 63 | 5 | 48 | 177 | 73 | 240 | 2.15e-30 | 111 |
| Msa0030280 | AT2G33310.3 | 38.587 | 184 | 64 | 6 | 44 | 178 | 47 | 230 | 2.41e-30 | 111 |
| Msa0030280 | AT2G33310.1 | 38.587 | 184 | 64 | 6 | 44 | 178 | 47 | 230 | 2.41e-30 | 111 |
| Msa0030280 | AT4G28640.2 | 39.881 | 168 | 63 | 5 | 48 | 177 | 73 | 240 | 1.22e-29 | 110 |
| Msa0030280 | AT2G33310.2 | 38.378 | 185 | 64 | 6 | 44 | 178 | 47 | 231 | 1.97e-29 | 108 |
| Msa0030280 | AT1G04550.2 | 35.754 | 179 | 74 | 4 | 40 | 178 | 46 | 223 | 4.84e-29 | 107 |
| Msa0030280 | AT3G16500.1 | 31.140 | 228 | 97 | 7 | 7 | 174 | 25 | 252 | 6.85e-27 | 102 |
| Msa0030280 | AT3G16500.2 | 31.336 | 217 | 93 | 6 | 14 | 174 | 36 | 252 | 7.03e-27 | 102 |
| Msa0030280 | AT5G25890.1 | 35.057 | 174 | 87 | 6 | 14 | 175 | 5 | 164 | 3.95e-26 | 98.6 |
| Msa0030280 | AT4G14550.4 | 42.384 | 151 | 51 | 7 | 11 | 125 | 1 | 151 | 8.07e-26 | 97.8 |
| Msa0030280 | AT1G51950.1 | 33.333 | 213 | 88 | 7 | 14 | 174 | 40 | 250 | 2.70e-25 | 98.6 |
| Msa0030280 | AT3G17600.1 | 36.232 | 138 | 74 | 3 | 42 | 171 | 23 | 154 | 2.80e-25 | 95.9 |
| Msa0030280 | AT3G23050.3 | 40.123 | 162 | 52 | 7 | 11 | 127 | 6 | 167 | 1.04e-24 | 94.7 |
| Msa0030280 | AT1G04100.1 | 38.788 | 165 | 50 | 4 | 65 | 178 | 95 | 259 | 2.87e-24 | 95.9 |
| Msa0030280 | AT2G46990.1 | 44.186 | 86 | 48 | 0 | 86 | 171 | 85 | 170 | 2.59e-20 | 83.6 |
| Msa0030280 | AT3G62100.1 | 45.349 | 86 | 47 | 0 | 86 | 171 | 83 | 168 | 2.60e-20 | 83.6 |
| Msa0030280 | AT1G80390.1 | 40.171 | 117 | 60 | 3 | 12 | 124 | 15 | 125 | 1.60e-18 | 77.4 |
| Msa0030280 | AT2G46990.2 | 45.205 | 73 | 40 | 0 | 86 | 158 | 85 | 157 | 3.09e-15 | 69.7 |
| Msa0030280 | AT3G62100.2 | 45.205 | 73 | 40 | 0 | 86 | 158 | 83 | 155 | 1.03e-14 | 68.2 |
| Msa0030280 | AT4G32280.2 | 34.884 | 86 | 51 | 2 | 86 | 171 | 118 | 198 | 2.98e-13 | 65.5 |
| Msa0030280 | AT4G32280.1 | 34.884 | 86 | 51 | 2 | 86 | 171 | 160 | 240 | 8.89e-13 | 64.7 |
| Msa0030280 | AT2G01200.2 | 38.614 | 101 | 59 | 2 | 76 | 175 | 89 | 187 | 1.70e-11 | 60.5 |
| Msa0030280 | AT2G01200.1 | 38.614 | 101 | 59 | 2 | 76 | 175 | 89 | 187 | 1.70e-11 | 60.5 |
| Msa0030280 | AT1G15050.2 | 37.778 | 90 | 53 | 2 | 87 | 175 | 62 | 149 | 6.20e-11 | 58.2 |
Find 56 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCAACATTAAATAATTTC+TGG | 0.172585 | 1_1:+56418322 | Msa0030280:three_prime_UTR |
| TTACAAGAGGCTGAGGCTTC+TGG | 0.222165 | 1_1:+56417694 | Msa0030280:CDS |
| AACCTTTCTGCTTGTGTTAT+CGG | 0.235448 | 1_1:+56418176 | Msa0030280:three_prime_UTR |
| TTCTTCCTGTAAGATCTTAT+TGG | 0.258525 | 1_1:-56417667 | None:intergenic |
| AAGATTGATTTGAGGGTCTA+TGG | 0.290855 | 1_1:+56417760 | Msa0030280:CDS |
| TGCACAACTTCTTAAAGCTT+TGG | 0.324497 | 1_1:+56417789 | Msa0030280:CDS |
| TCCTTTGAAGTTTCAGTCAA+TGG | 0.340316 | 1_1:-56417472 | None:intergenic |
| CTATCTGAAGTTGTGCTCTA+AGG | 0.354793 | 1_1:+56418263 | Msa0030280:three_prime_UTR |
| CTTCTGAATTATTTGAAAGA+TGG | 0.355127 | 1_1:+56417336 | Msa0030280:exon |
| TAAATTTCTTTGTTATTGAA+TGG | 0.358362 | 1_1:+56418560 | Msa0030280:three_prime_UTR |
| GAATGAAAAGTGAAGTGTTT+TGG | 0.375005 | 1_1:+56418133 | Msa0030280:three_prime_UTR |
| TATGTGAAAGTGAGTTTAGA+TGG | 0.375233 | 1_1:+56417721 | Msa0030280:CDS |
| CCTTAGGAAGATTGATTTGA+GGG | 0.380707 | 1_1:+56417753 | Msa0030280:CDS |
| GAGCTAAGATTAGGACTTCC+AGG | 0.382329 | 1_1:+56417403 | Msa0030280:CDS |
| ACTTGCAGGGCTAAGATAGT+AGG | 0.383062 | 1_1:+56417637 | Msa0030280:intron |
| TACAAGAGGCTGAGGCTTCT+GGG | 0.384427 | 1_1:+56417695 | Msa0030280:CDS |
| CCATCTTTATCTTCATATGT+AGG | 0.415484 | 1_1:-56417880 | None:intergenic |
| TTCTGGTTACTTTAGCATCT+AGG | 0.421644 | 1_1:+56418339 | Msa0030280:three_prime_UTR |
| GGCCACCAATAAGATCTTAC+AGG | 0.438714 | 1_1:+56417662 | Msa0030280:CDS |
| CTTAGAGCACAACTTCAGAT+AGG | 0.438793 | 1_1:-56418262 | None:intergenic |
| GATGGTGATTGGATGTTAGT+TGG | 0.443053 | 1_1:+56417898 | Msa0030280:CDS |
| TAGATGGAGCTCCTTACCTT+AGG | 0.462831 | 1_1:+56417737 | Msa0030280:CDS |
| TTCCTGTAAGATCTTATTGG+TGG | 0.463988 | 1_1:-56417664 | None:intergenic |
| TCAAATGAAAGAGATAGAAA+AGG | 0.479155 | 1_1:+56418453 | Msa0030280:three_prime_UTR |
| CCAGAAATTATTTAATGTTG+AGG | 0.479266 | 1_1:-56418322 | None:intergenic |
| ATGAAGATAAAGATGGTGAT+TGG | 0.480229 | 1_1:+56417887 | Msa0030280:CDS |
| CAAGAAAGAAAGTCCTTGTA+AGG | 0.484427 | 1_1:-56417313 | None:intergenic |
| TATCGGAAGAACTAAACAAA+TGG | 0.489024 | 1_1:+56418193 | Msa0030280:three_prime_UTR |
| ACCTTAGGAAGATTGATTTG+AGG | 0.502641 | 1_1:+56417752 | Msa0030280:CDS |
| AAGGCTACTGAGCTAAGATT+AGG | 0.511132 | 1_1:+56417394 | Msa0030280:CDS |
| CAAATGAAAGAGATAGAAAA+GGG | 0.511488 | 1_1:+56418454 | Msa0030280:three_prime_UTR |
| AAATCAATCTTCCTAAGGTA+AGG | 0.513222 | 1_1:-56417748 | None:intergenic |
| CTGAAGTTGTGCTCTAAGGA+AGG | 0.514838 | 1_1:+56418267 | Msa0030280:three_prime_UTR |
| CCCTCAAATCAATCTTCCTA+AGG | 0.515293 | 1_1:-56417753 | None:intergenic |
| TTCCGATAACACAAGCAGAA+AGG | 0.522135 | 1_1:-56418178 | None:intergenic |
| TGTGCTCTAAGGAAGGGAAA+TGG | 0.525813 | 1_1:+56418274 | Msa0030280:three_prime_UTR |
| TGAAGTTGTGCTCTAAGGAA+GGG | 0.550378 | 1_1:+56418268 | Msa0030280:three_prime_UTR |
| ACAAGTGAATCAACCTTACA+AGG | 0.550779 | 1_1:+56417300 | Msa0030280:five_prime_UTR |
| CTTGCAGGGCTAAGATAGTA+GGG | 0.554533 | 1_1:+56417638 | Msa0030280:intron |
| GAACAGTTTACAAGAGGCTG+AGG | 0.558668 | 1_1:+56417687 | Msa0030280:CDS |
| ATATATGATGATAAAGGAGA+AGG | 0.564955 | 1_1:-56417206 | None:intergenic |
| TGTTAGTTGGAGATGTTCCA+TGG | 0.566837 | 1_1:+56417911 | Msa0030280:CDS |
| CCTACATATGAAGATAAAGA+TGG | 0.572828 | 1_1:+56417880 | Msa0030280:CDS |
| ACCATTGACTGAAACTTCAA+AGG | 0.585923 | 1_1:+56417471 | Msa0030280:CDS |
| TGAGAATGATCTCAACATGA+AGG | 0.586923 | 1_1:+56417375 | Msa0030280:CDS |
| GATGGAAATACAAGAATGCA+AGG | 0.588783 | 1_1:-56417238 | None:intergenic |
| GATGTTAAAGAGATGTGAGA+TGG | 0.591561 | 1_1:-56417256 | None:intergenic |
| ATTGATTTGAGGGTCTATGG+TGG | 0.593128 | 1_1:+56417763 | Msa0030280:CDS |
| CAGGAAGAACAGTTTACAAG+AGG | 0.599653 | 1_1:+56417681 | Msa0030280:CDS |
| GTTAGTTGGAGATGTTCCAT+GGG | 0.617620 | 1_1:+56417912 | Msa0030280:CDS |
| AGCATGTTCAAGTTAACCAT+AGG | 0.640019 | 1_1:+56417814 | Msa0030280:CDS |
| AAAAGACTAAGAATCATGAA+AGG | 0.648151 | 1_1:+56418066 | Msa0030280:CDS |
| AGCTAAGATTAGGACTTCCA+GGG | 0.649383 | 1_1:+56417404 | Msa0030280:CDS |
| ATGAAAGGAACAGAAGCTAG+AGG | 0.651214 | 1_1:+56418081 | Msa0030280:CDS |
| ACTGAAACTTCAAAGGACAG+TGG | 0.678691 | 1_1:+56417478 | Msa0030280:CDS |
| GCAGGGCTAAGATAGTAGGG+TGG | 0.770265 | 1_1:+56417641 | Msa0030280:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATATATGATGATAA+AGG | - | chr1_1:56417215-56417234 | None:intergenic | 10.0% |
| !!! | TATTTTATATATGATGATAA+AGG | - | chr1_1:56417215-56417234 | None:intergenic | 10.0% |
| !! | AAAGTAAAAAAAAAAATCAG+TGG | - | chr1_1:56418396-56418415 | None:intergenic | 15.0% |
| !!! | TAAATTTCTTTGTTATTGAA+TGG | + | chr1_1:56418560-56418579 | Msa0030280:three_prime_UTR | 15.0% |
| !! | AAAGTAAAAAAAAAAATCAG+TGG | - | chr1_1:56418396-56418415 | None:intergenic | 15.0% |
| !!! | TAAATTTCTTTGTTATTGAA+TGG | + | chr1_1:56418560-56418579 | Msa0030280:three_prime_UTR | 15.0% |
| !!! | TTTTTCTTTCTACCTTATAA+AGG | + | chr1_1:56417574-56417593 | Msa0030280:intron | 20.0% |
| !!! | TTTTCTTTCTACCTTATAAA+GGG | + | chr1_1:56417575-56417594 | Msa0030280:intron | 20.0% |
| !!! | TTTTTCTTTCTACCTTATAA+AGG | + | chr1_1:56417574-56417593 | Msa0030280:intron | 20.0% |
| !!! | TTTTCTTTCTACCTTATAAA+GGG | + | chr1_1:56417575-56417594 | Msa0030280:intron | 20.0% |
| ! | CTTCTGAATTATTTGAAAGA+TGG | + | chr1_1:56417336-56417355 | Msa0030280:exon | 25.0% |
| !! | ATCTTTTGAACTTACTTTGA+AGG | - | chr1_1:56417532-56417551 | None:intergenic | 25.0% |
| !!! | AGAATATTTTTTTGACTTGC+AGG | + | chr1_1:56417623-56417642 | Msa0030280:intron | 25.0% |
| !!! | GAATATTTTTTTGACTTGCA+GGG | + | chr1_1:56417624-56417643 | Msa0030280:intron | 25.0% |
| !!! | TTTTTCAGAATAATCACCTA+TGG | - | chr1_1:56417833-56417852 | None:intergenic | 25.0% |
| ! | TCTGAAAAAGAAGGTTATAA+AGG | + | chr1_1:56417844-56417863 | Msa0030280:CDS | 25.0% |
| ! | GCATATATAGAGAGAAAAAA+AGG | - | chr1_1:56417945-56417964 | None:intergenic | 25.0% |
| ! | AAAAGACTAAGAATCATGAA+AGG | + | chr1_1:56418066-56418085 | Msa0030280:CDS | 25.0% |
| ! | CCAGAAATTATTTAATGTTG+AGG | - | chr1_1:56418325-56418344 | None:intergenic | 25.0% |
| ! | CCTCAACATTAAATAATTTC+TGG | + | chr1_1:56418322-56418341 | Msa0030280:three_prime_UTR | 25.0% |
| ! | TCAAATGAAAGAGATAGAAA+AGG | + | chr1_1:56418453-56418472 | Msa0030280:three_prime_UTR | 25.0% |
| ! | CAAATGAAAGAGATAGAAAA+GGG | + | chr1_1:56418454-56418473 | Msa0030280:three_prime_UTR | 25.0% |
| ! | CATCAATACAAGAAAAAACT+TGG | - | chr1_1:56418505-56418524 | None:intergenic | 25.0% |
| ! | CTTCTGAATTATTTGAAAGA+TGG | + | chr1_1:56417336-56417355 | Msa0030280:exon | 25.0% |
| !! | ATCTTTTGAACTTACTTTGA+AGG | - | chr1_1:56417532-56417551 | None:intergenic | 25.0% |
| !!! | AGAATATTTTTTTGACTTGC+AGG | + | chr1_1:56417623-56417642 | Msa0030280:intron | 25.0% |
| !!! | GAATATTTTTTTGACTTGCA+GGG | + | chr1_1:56417624-56417643 | Msa0030280:intron | 25.0% |
| !!! | TTTTTCAGAATAATCACCTA+TGG | - | chr1_1:56417833-56417852 | None:intergenic | 25.0% |
| ! | TCTGAAAAAGAAGGTTATAA+AGG | + | chr1_1:56417844-56417863 | Msa0030280:CDS | 25.0% |
| ! | GCATATATAGAGAGAAAAAA+AGG | - | chr1_1:56417945-56417964 | None:intergenic | 25.0% |
| ! | AAAAGACTAAGAATCATGAA+AGG | + | chr1_1:56418066-56418085 | Msa0030280:CDS | 25.0% |
| ! | CCAGAAATTATTTAATGTTG+AGG | - | chr1_1:56418325-56418344 | None:intergenic | 25.0% |
| ! | CCTCAACATTAAATAATTTC+TGG | + | chr1_1:56418322-56418341 | Msa0030280:three_prime_UTR | 25.0% |
| ! | TCAAATGAAAGAGATAGAAA+AGG | + | chr1_1:56418453-56418472 | Msa0030280:three_prime_UTR | 25.0% |
| ! | CAAATGAAAGAGATAGAAAA+GGG | + | chr1_1:56418454-56418473 | Msa0030280:three_prime_UTR | 25.0% |
| ! | CATCAATACAAGAAAAAACT+TGG | - | chr1_1:56418505-56418524 | None:intergenic | 25.0% |
| !! | TTTTGAACTTACTTTGAAGG+AGG | - | chr1_1:56417529-56417548 | None:intergenic | 30.0% |
| TTCTTCCTGTAAGATCTTAT+TGG | - | chr1_1:56417670-56417689 | None:intergenic | 30.0% | |
| TATGTGAAAGTGAGTTTAGA+TGG | + | chr1_1:56417721-56417740 | Msa0030280:CDS | 30.0% | |
| AAATCAATCTTCCTAAGGTA+AGG | - | chr1_1:56417751-56417770 | None:intergenic | 30.0% | |
| ! | GGTGATTATTCTGAAAAAGA+AGG | + | chr1_1:56417835-56417854 | Msa0030280:CDS | 30.0% |
| CCATCTTTATCTTCATATGT+AGG | - | chr1_1:56417883-56417902 | None:intergenic | 30.0% | |
| CCTACATATGAAGATAAAGA+TGG | + | chr1_1:56417880-56417899 | Msa0030280:CDS | 30.0% | |
| ATGAAGATAAAGATGGTGAT+TGG | + | chr1_1:56417887-56417906 | Msa0030280:CDS | 30.0% | |
| !! | GAATGAAAAGTGAAGTGTTT+TGG | + | chr1_1:56418133-56418152 | Msa0030280:three_prime_UTR | 30.0% |
| TATCGGAAGAACTAAACAAA+TGG | + | chr1_1:56418193-56418212 | Msa0030280:three_prime_UTR | 30.0% | |
| !! | TTTTGAACTTACTTTGAAGG+AGG | - | chr1_1:56417529-56417548 | None:intergenic | 30.0% |
| TTCTTCCTGTAAGATCTTAT+TGG | - | chr1_1:56417670-56417689 | None:intergenic | 30.0% | |
| TATGTGAAAGTGAGTTTAGA+TGG | + | chr1_1:56417721-56417740 | Msa0030280:CDS | 30.0% | |
| AAATCAATCTTCCTAAGGTA+AGG | - | chr1_1:56417751-56417770 | None:intergenic | 30.0% | |
| ! | GGTGATTATTCTGAAAAAGA+AGG | + | chr1_1:56417835-56417854 | Msa0030280:CDS | 30.0% |
| CCATCTTTATCTTCATATGT+AGG | - | chr1_1:56417883-56417902 | None:intergenic | 30.0% | |
| CCTACATATGAAGATAAAGA+TGG | + | chr1_1:56417880-56417899 | Msa0030280:CDS | 30.0% | |
| ATGAAGATAAAGATGGTGAT+TGG | + | chr1_1:56417887-56417906 | Msa0030280:CDS | 30.0% | |
| !! | GAATGAAAAGTGAAGTGTTT+TGG | + | chr1_1:56418133-56418152 | Msa0030280:three_prime_UTR | 30.0% |
| TATCGGAAGAACTAAACAAA+TGG | + | chr1_1:56418193-56418212 | Msa0030280:three_prime_UTR | 30.0% | |
| GATGGAAATACAAGAATGCA+AGG | - | chr1_1:56417241-56417260 | None:intergenic | 35.0% | |
| GATGTTAAAGAGATGTGAGA+TGG | - | chr1_1:56417259-56417278 | None:intergenic | 35.0% | |
| ACAAGTGAATCAACCTTACA+AGG | + | chr1_1:56417300-56417319 | Msa0030280:five_prime_UTR | 35.0% | |
| CAAGAAAGAAAGTCCTTGTA+AGG | - | chr1_1:56417316-56417335 | None:intergenic | 35.0% | |
| TGAGAATGATCTCAACATGA+AGG | + | chr1_1:56417375-56417394 | Msa0030280:CDS | 35.0% | |
| ! | TTCAGTCAATGGTCTTTTGT+TGG | - | chr1_1:56417464-56417483 | None:intergenic | 35.0% |
| ! | ACCATTGACTGAAACTTCAA+AGG | + | chr1_1:56417471-56417490 | Msa0030280:CDS | 35.0% |
| !! | TCCTTTGAAGTTTCAGTCAA+TGG | - | chr1_1:56417475-56417494 | None:intergenic | 35.0% |
| ACATCATGCAACCCTTTATA+AGG | - | chr1_1:56417589-56417608 | None:intergenic | 35.0% | |
| TTCCTGTAAGATCTTATTGG+TGG | - | chr1_1:56417667-56417686 | None:intergenic | 35.0% | |
| !! | ACCTTAGGAAGATTGATTTG+AGG | + | chr1_1:56417752-56417771 | Msa0030280:CDS | 35.0% |
| !! | CCTTAGGAAGATTGATTTGA+GGG | + | chr1_1:56417753-56417772 | Msa0030280:CDS | 35.0% |
| !! | AAGATTGATTTGAGGGTCTA+TGG | + | chr1_1:56417760-56417779 | Msa0030280:CDS | 35.0% |
| TGCACAACTTCTTAAAGCTT+TGG | + | chr1_1:56417789-56417808 | Msa0030280:CDS | 35.0% | |
| ! | AGCATGTTCAAGTTAACCAT+AGG | + | chr1_1:56417814-56417833 | Msa0030280:CDS | 35.0% |
| AAAAAAAGGACTTACTCCCA+TGG | - | chr1_1:56417931-56417950 | None:intergenic | 35.0% | |
| AACCTTTCTGCTTGTGTTAT+CGG | + | chr1_1:56418176-56418195 | Msa0030280:three_prime_UTR | 35.0% | |
| ! | TTCTGGTTACTTTAGCATCT+AGG | + | chr1_1:56418339-56418358 | Msa0030280:three_prime_UTR | 35.0% |
| GATGGAAATACAAGAATGCA+AGG | - | chr1_1:56417241-56417260 | None:intergenic | 35.0% | |
| GATGTTAAAGAGATGTGAGA+TGG | - | chr1_1:56417259-56417278 | None:intergenic | 35.0% | |
| ACAAGTGAATCAACCTTACA+AGG | + | chr1_1:56417300-56417319 | Msa0030280:five_prime_UTR | 35.0% | |
| CAAGAAAGAAAGTCCTTGTA+AGG | - | chr1_1:56417316-56417335 | None:intergenic | 35.0% | |
| TGAGAATGATCTCAACATGA+AGG | + | chr1_1:56417375-56417394 | Msa0030280:CDS | 35.0% | |
| ! | TTCAGTCAATGGTCTTTTGT+TGG | - | chr1_1:56417464-56417483 | None:intergenic | 35.0% |
| ! | ACCATTGACTGAAACTTCAA+AGG | + | chr1_1:56417471-56417490 | Msa0030280:CDS | 35.0% |
| !! | TCCTTTGAAGTTTCAGTCAA+TGG | - | chr1_1:56417475-56417494 | None:intergenic | 35.0% |
| ACATCATGCAACCCTTTATA+AGG | - | chr1_1:56417589-56417608 | None:intergenic | 35.0% | |
| TTCCTGTAAGATCTTATTGG+TGG | - | chr1_1:56417667-56417686 | None:intergenic | 35.0% | |
| !! | ACCTTAGGAAGATTGATTTG+AGG | + | chr1_1:56417752-56417771 | Msa0030280:CDS | 35.0% |
| !! | CCTTAGGAAGATTGATTTGA+GGG | + | chr1_1:56417753-56417772 | Msa0030280:CDS | 35.0% |
| !! | AAGATTGATTTGAGGGTCTA+TGG | + | chr1_1:56417760-56417779 | Msa0030280:CDS | 35.0% |
| TGCACAACTTCTTAAAGCTT+TGG | + | chr1_1:56417789-56417808 | Msa0030280:CDS | 35.0% | |
| ! | AGCATGTTCAAGTTAACCAT+AGG | + | chr1_1:56417814-56417833 | Msa0030280:CDS | 35.0% |
| AAAAAAAGGACTTACTCCCA+TGG | - | chr1_1:56417931-56417950 | None:intergenic | 35.0% | |
| AACCTTTCTGCTTGTGTTAT+CGG | + | chr1_1:56418176-56418195 | Msa0030280:three_prime_UTR | 35.0% | |
| ! | TTCTGGTTACTTTAGCATCT+AGG | + | chr1_1:56418339-56418358 | Msa0030280:three_prime_UTR | 35.0% |
| AAGGCTACTGAGCTAAGATT+AGG | + | chr1_1:56417394-56417413 | Msa0030280:CDS | 40.0% | |
| AGCTAAGATTAGGACTTCCA+GGG | + | chr1_1:56417404-56417423 | Msa0030280:CDS | 40.0% | |
| ! | TCTTCATTTTGTTCTGTCCC+TGG | - | chr1_1:56417424-56417443 | None:intergenic | 40.0% |
| ACTGAAACTTCAAAGGACAG+TGG | + | chr1_1:56417478-56417497 | Msa0030280:CDS | 40.0% | |
| CAGGAAGAACAGTTTACAAG+AGG | + | chr1_1:56417681-56417700 | Msa0030280:CDS | 40.0% | |
| CCCTCAAATCAATCTTCCTA+AGG | - | chr1_1:56417756-56417775 | None:intergenic | 40.0% | |
| !! | ATTGATTTGAGGGTCTATGG+TGG | + | chr1_1:56417763-56417782 | Msa0030280:CDS | 40.0% |
| GATGGTGATTGGATGTTAGT+TGG | + | chr1_1:56417898-56417917 | Msa0030280:CDS | 40.0% | |
| TGTTAGTTGGAGATGTTCCA+TGG | + | chr1_1:56417911-56417930 | Msa0030280:CDS | 40.0% | |
| GTTAGTTGGAGATGTTCCAT+GGG | + | chr1_1:56417912-56417931 | Msa0030280:CDS | 40.0% | |
| ATGAAAGGAACAGAAGCTAG+AGG | + | chr1_1:56418081-56418100 | Msa0030280:CDS | 40.0% | |
| !!! | AGTGAAGTGTTTTGGTGTGA+AGG | + | chr1_1:56418141-56418160 | Msa0030280:three_prime_UTR | 40.0% |
| !!! | GTGAAGTGTTTTGGTGTGAA+GGG | + | chr1_1:56418142-56418161 | Msa0030280:three_prime_UTR | 40.0% |
| TTCCGATAACACAAGCAGAA+AGG | - | chr1_1:56418181-56418200 | None:intergenic | 40.0% | |
| CTTAGAGCACAACTTCAGAT+AGG | - | chr1_1:56418265-56418284 | None:intergenic | 40.0% | |
| ! | CTATCTGAAGTTGTGCTCTA+AGG | + | chr1_1:56418263-56418282 | Msa0030280:three_prime_UTR | 40.0% |
| !! | TGAAGTTGTGCTCTAAGGAA+GGG | + | chr1_1:56418268-56418287 | Msa0030280:three_prime_UTR | 40.0% |
| AAGGCTACTGAGCTAAGATT+AGG | + | chr1_1:56417394-56417413 | Msa0030280:CDS | 40.0% | |
| AGCTAAGATTAGGACTTCCA+GGG | + | chr1_1:56417404-56417423 | Msa0030280:CDS | 40.0% | |
| ! | TCTTCATTTTGTTCTGTCCC+TGG | - | chr1_1:56417424-56417443 | None:intergenic | 40.0% |
| ACTGAAACTTCAAAGGACAG+TGG | + | chr1_1:56417478-56417497 | Msa0030280:CDS | 40.0% | |
| CAGGAAGAACAGTTTACAAG+AGG | + | chr1_1:56417681-56417700 | Msa0030280:CDS | 40.0% | |
| CCCTCAAATCAATCTTCCTA+AGG | - | chr1_1:56417756-56417775 | None:intergenic | 40.0% | |
| !! | ATTGATTTGAGGGTCTATGG+TGG | + | chr1_1:56417763-56417782 | Msa0030280:CDS | 40.0% |
| GATGGTGATTGGATGTTAGT+TGG | + | chr1_1:56417898-56417917 | Msa0030280:CDS | 40.0% | |
| TGTTAGTTGGAGATGTTCCA+TGG | + | chr1_1:56417911-56417930 | Msa0030280:CDS | 40.0% | |
| GTTAGTTGGAGATGTTCCAT+GGG | + | chr1_1:56417912-56417931 | Msa0030280:CDS | 40.0% | |
| ATGAAAGGAACAGAAGCTAG+AGG | + | chr1_1:56418081-56418100 | Msa0030280:CDS | 40.0% | |
| !!! | AGTGAAGTGTTTTGGTGTGA+AGG | + | chr1_1:56418141-56418160 | Msa0030280:three_prime_UTR | 40.0% |
| !!! | GTGAAGTGTTTTGGTGTGAA+GGG | + | chr1_1:56418142-56418161 | Msa0030280:three_prime_UTR | 40.0% |
| TTCCGATAACACAAGCAGAA+AGG | - | chr1_1:56418181-56418200 | None:intergenic | 40.0% | |
| CTTAGAGCACAACTTCAGAT+AGG | - | chr1_1:56418265-56418284 | None:intergenic | 40.0% | |
| ! | CTATCTGAAGTTGTGCTCTA+AGG | + | chr1_1:56418263-56418282 | Msa0030280:three_prime_UTR | 40.0% |
| !! | TGAAGTTGTGCTCTAAGGAA+GGG | + | chr1_1:56418268-56418287 | Msa0030280:three_prime_UTR | 40.0% |
| GAGCTAAGATTAGGACTTCC+AGG | + | chr1_1:56417403-56417422 | Msa0030280:CDS | 45.0% | |
| ACTTGCAGGGCTAAGATAGT+AGG | + | chr1_1:56417637-56417656 | Msa0030280:intron | 45.0% | |
| CTTGCAGGGCTAAGATAGTA+GGG | + | chr1_1:56417638-56417657 | Msa0030280:intron | 45.0% | |
| GGCCACCAATAAGATCTTAC+AGG | + | chr1_1:56417662-56417681 | Msa0030280:CDS | 45.0% | |
| GAACAGTTTACAAGAGGCTG+AGG | + | chr1_1:56417687-56417706 | Msa0030280:CDS | 45.0% | |
| TAGATGGAGCTCCTTACCTT+AGG | + | chr1_1:56417737-56417756 | Msa0030280:CDS | 45.0% | |
| !! | CTGAAGTTGTGCTCTAAGGA+AGG | + | chr1_1:56418267-56418286 | Msa0030280:three_prime_UTR | 45.0% |
| !! | TGTGCTCTAAGGAAGGGAAA+TGG | + | chr1_1:56418274-56418293 | Msa0030280:three_prime_UTR | 45.0% |
| GAGCTAAGATTAGGACTTCC+AGG | + | chr1_1:56417403-56417422 | Msa0030280:CDS | 45.0% | |
| ACTTGCAGGGCTAAGATAGT+AGG | + | chr1_1:56417637-56417656 | Msa0030280:intron | 45.0% | |
| CTTGCAGGGCTAAGATAGTA+GGG | + | chr1_1:56417638-56417657 | Msa0030280:intron | 45.0% | |
| GGCCACCAATAAGATCTTAC+AGG | + | chr1_1:56417662-56417681 | Msa0030280:CDS | 45.0% | |
| GAACAGTTTACAAGAGGCTG+AGG | + | chr1_1:56417687-56417706 | Msa0030280:CDS | 45.0% | |
| TAGATGGAGCTCCTTACCTT+AGG | + | chr1_1:56417737-56417756 | Msa0030280:CDS | 45.0% | |
| !! | CTGAAGTTGTGCTCTAAGGA+AGG | + | chr1_1:56418267-56418286 | Msa0030280:three_prime_UTR | 45.0% |
| !! | TGTGCTCTAAGGAAGGGAAA+TGG | + | chr1_1:56418274-56418293 | Msa0030280:three_prime_UTR | 45.0% |
| TTACAAGAGGCTGAGGCTTC+TGG | + | chr1_1:56417694-56417713 | Msa0030280:CDS | 50.0% | |
| TACAAGAGGCTGAGGCTTCT+GGG | + | chr1_1:56417695-56417714 | Msa0030280:CDS | 50.0% | |
| TTACAAGAGGCTGAGGCTTC+TGG | + | chr1_1:56417694-56417713 | Msa0030280:CDS | 50.0% | |
| TACAAGAGGCTGAGGCTTCT+GGG | + | chr1_1:56417695-56417714 | Msa0030280:CDS | 50.0% | |
| GCAGGGCTAAGATAGTAGGG+TGG | + | chr1_1:56417641-56417660 | Msa0030280:intron | 55.0% | |
| GCAGGGCTAAGATAGTAGGG+TGG | + | chr1_1:56417641-56417660 | Msa0030280:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 56417209 | 56418605 | 56417209 | ID=Msa0030280;Name=Msa0030280 |
| chr1_1 | mRNA | 56417209 | 56418605 | 56417209 | ID=Msa0030280-mRNA-1;Parent=Msa0030280;Name=Msa0030280-mRNA-1;_AED=0.08;_eAED=0.08;_QI=146|1|1|1|1|1|3|495|178 |
| chr1_1 | exon | 56417209 | 56417536 | 56417209 | ID=Msa0030280-mRNA-1:exon:16896;Parent=Msa0030280-mRNA-1 |
| chr1_1 | exon | 56417645 | 56417935 | 56417645 | ID=Msa0030280-mRNA-1:exon:16897;Parent=Msa0030280-mRNA-1 |
| chr1_1 | exon | 56418047 | 56418605 | 56418047 | ID=Msa0030280-mRNA-1:exon:16898;Parent=Msa0030280-mRNA-1 |
| chr1_1 | five_prime_UTR | 56417209 | 56417354 | 56417209 | ID=Msa0030280-mRNA-1:five_prime_utr;Parent=Msa0030280-mRNA-1 |
| chr1_1 | CDS | 56417355 | 56417536 | 56417355 | ID=Msa0030280-mRNA-1:cds;Parent=Msa0030280-mRNA-1 |
| chr1_1 | CDS | 56417645 | 56417935 | 56417645 | ID=Msa0030280-mRNA-1:cds;Parent=Msa0030280-mRNA-1 |
| chr1_1 | CDS | 56418047 | 56418110 | 56418047 | ID=Msa0030280-mRNA-1:cds;Parent=Msa0030280-mRNA-1 |
| chr1_1 | three_prime_UTR | 56418111 | 56418605 | 56418111 | ID=Msa0030280-mRNA-1:three_prime_utr;Parent=Msa0030280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
