Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0442270 | XP_039687610.1 | 97.115 | 624 | 12 | 1 | 1 | 624 | 1 | 618 | 0.0 | 1267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0442270 | sp|Q501H5|SFH13_ARATH | 60.918 | 632 | 232 | 9 | 1 | 624 | 1 | 625 | 0.0 | 715 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0442270 | A0A396IIN5 | 97.115 | 624 | 12 | 1 | 1 | 624 | 1 | 618 | 0.0 | 1267 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005270 | Msa0442270 | 0.805091 | 1.577982e-49 | -8.615850e-47 |
| Msa0040620 | Msa0442270 | 0.819788 | 9.660788e-53 | -8.615850e-47 |
| Msa0059890 | Msa0442270 | 0.800331 | 1.515331e-48 | -8.615850e-47 |
| Msa0068430 | Msa0442270 | 0.823112 | 1.650685e-53 | -8.615850e-47 |
| Msa0085370 | Msa0442270 | 0.836772 | 7.693243e-57 | -8.615850e-47 |
| Msa0085720 | Msa0442270 | 0.805884 | 1.076045e-49 | -8.615850e-47 |
| Msa0090030 | Msa0442270 | 0.804202 | 2.418696e-49 | -8.615850e-47 |
| Msa0092440 | Msa0442270 | 0.835215 | 1.910178e-56 | -8.615850e-47 |
| Msa0096580 | Msa0442270 | 0.812772 | 3.583797e-51 | -8.615850e-47 |
| Msa0126230 | Msa0442270 | 0.802319 | 5.935364e-49 | -8.615850e-47 |
| Msa0138210 | Msa0442270 | 0.808377 | 3.190639e-50 | -8.615850e-47 |
| Msa0138500 | Msa0442270 | 0.817500 | 3.193381e-52 | -8.615850e-47 |
| Msa0138520 | Msa0442270 | 0.821047 | 4.970283e-53 | -8.615850e-47 |
| Msa0140510 | Msa0442270 | -0.803387 | 3.571103e-49 | -8.615850e-47 |
| Msa0145150 | Msa0442270 | 0.816750 | 4.707143e-52 | -8.615850e-47 |
| Msa0169820 | Msa0442270 | 0.801976 | 6.984342e-49 | -8.615850e-47 |
| Msa0185510 | Msa0442270 | 0.807269 | 5.489072e-50 | -8.615850e-47 |
| Msa0187060 | Msa0442270 | 0.816961 | 4.222372e-52 | -8.615850e-47 |
| Msa0193540 | Msa0442270 | 0.821171 | 4.652798e-53 | -8.615850e-47 |
| Msa0219240 | Msa0442270 | 0.815440 | 9.233007e-52 | -8.615850e-47 |
| Msa0235470 | Msa0442270 | 0.808897 | 2.470685e-50 | -8.615850e-47 |
| Msa0236770 | Msa0442270 | 0.827622 | 1.413283e-54 | -8.615850e-47 |
| Msa0377440 | Msa0442270 | 0.812228 | 4.712653e-51 | -8.615850e-47 |
| Msa0381000 | Msa0442270 | 0.819930 | 8.964720e-53 | -8.615850e-47 |
| Msa0381080 | Msa0442270 | 0.813327 | 2.707338e-51 | -8.615850e-47 |
| Msa0390960 | Msa0442270 | 0.836609 | 8.463021e-57 | -8.615850e-47 |
| Msa0394390 | Msa0442270 | 0.901708 | 2.037979e-78 | -8.615850e-47 |
| Msa0417650 | Msa0442270 | 0.829395 | 5.273314e-55 | -8.615850e-47 |
| Msa0417730 | Msa0442270 | 0.811686 | 6.183763e-51 | -8.615850e-47 |
| Msa0430870 | Msa0442270 | 0.828211 | 1.019611e-54 | -8.615850e-47 |
| Msa0430950 | Msa0442270 | 0.816762 | 4.677526e-52 | -8.615850e-47 |
| Msa0436190 | Msa0442270 | 0.800454 | 1.430323e-48 | -8.615850e-47 |
| Msa0436370 | Msa0442270 | 0.801996 | 6.918055e-49 | -8.615850e-47 |
| Msa0437400 | Msa0442270 | 0.807323 | 5.345904e-50 | -8.615850e-47 |
| Msa0442270 | Msa0473980 | 0.802981 | 4.334963e-49 | -8.615850e-47 |
| Msa0442270 | Msa0554380 | -0.812070 | 5.100391e-51 | -8.615850e-47 |
| Msa0442270 | Msa0585900 | 0.822316 | 2.528736e-53 | -8.615850e-47 |
| Msa0442270 | Msa0588240 | 0.804231 | 2.385222e-49 | -8.615850e-47 |
| Msa0442270 | Msa0621650 | 0.823197 | 1.576443e-53 | -8.615850e-47 |
| Msa0442270 | Msa0621840 | 0.814651 | 1.382040e-51 | -8.615850e-47 |
| Msa0442270 | Msa0625790 | 0.807143 | 5.836833e-50 | -8.615850e-47 |
| Msa0442270 | Msa0682090 | 0.804502 | 2.094751e-49 | -8.615850e-47 |
| Msa0442270 | Msa0682140 | 0.806628 | 7.500451e-50 | -8.615850e-47 |
| Msa0442270 | Msa0698440 | 0.812767 | 3.592910e-51 | -8.615850e-47 |
| Msa0442270 | Msa0716860 | 0.800307 | 1.532648e-48 | -8.615850e-47 |
| Msa0442270 | Msa0751210 | 0.808720 | 2.696114e-50 | -8.615850e-47 |
| Msa0442270 | Msa0791240 | 0.807008 | 6.234438e-50 | -8.615850e-47 |
| Msa0442270 | Msa0794320 | 0.809244 | 2.082364e-50 | -8.615850e-47 |
| Msa0442270 | Msa0803590 | 0.800697 | 1.276075e-48 | -8.615850e-47 |
| Msa0442270 | Msa0861830 | 0.811759 | 5.961568e-51 | -8.615850e-47 |
| Msa0442270 | Msa0866400 | 0.809202 | 2.126123e-50 | -8.615850e-47 |
| Msa0442270 | Msa0866410 | 0.804071 | 2.575639e-49 | -8.615850e-47 |
| Msa0442270 | Msa0909010 | 0.832187 | 1.090426e-55 | -8.615850e-47 |
| Msa0442270 | Msa0930140 | 0.809515 | 1.821777e-50 | -8.615850e-47 |
| Msa0442270 | Msa0945100 | 0.802257 | 6.113763e-49 | -8.615850e-47 |
| Msa0442270 | Msa0959010 | 0.802134 | 6.478858e-49 | -8.615850e-47 |
| Msa0442270 | Msa0981310 | 0.839326 | 1.694222e-57 | -8.615850e-47 |
| Msa0442270 | Msa0982240 | 0.830224 | 3.312609e-55 | -8.615850e-47 |
| Msa0442270 | Msa1021510 | 0.804298 | 2.310209e-49 | -8.615850e-47 |
| Msa0442270 | Msa1035930 | 0.800428 | 1.447758e-48 | -8.615850e-47 |
| Msa0442270 | Msa1036740 | 0.813279 | 2.773664e-51 | -8.615850e-47 |
| Msa0442270 | Msa1056460 | 0.804926 | 1.708132e-49 | -8.615850e-47 |
| Msa0442270 | Msa1065610 | 0.801462 | 8.903728e-49 | -8.615850e-47 |
| Msa0442270 | Msa1122780 | 0.800493 | 1.404361e-48 | -8.615850e-47 |
| Msa0442270 | Msa1144970 | 0.803294 | 3.733415e-49 | -8.615850e-47 |
| Msa0442270 | Msa1163870 | 0.805045 | 1.613489e-49 | -8.615850e-47 |
| Msa0442270 | Msa1170800 | 0.823361 | 1.443575e-53 | -8.615850e-47 |
| Msa0442270 | Msa1174310 | 0.806437 | 8.231501e-50 | -8.615850e-47 |
| Msa0442270 | Msa1174850 | 0.807929 | 3.975410e-50 | -8.615850e-47 |
| Msa0442270 | Msa1176360 | 0.811194 | 7.907082e-51 | -8.615850e-47 |
| Msa0442270 | Msa1263290 | -0.803886 | 2.814000e-49 | -8.615850e-47 |
| Msa0442270 | Msa1314770 | 0.804973 | 1.670241e-49 | -8.615850e-47 |
| Msa0442270 | Msa1320820 | 0.807229 | 5.598067e-50 | -8.615850e-47 |
| Msa0442270 | Msa1369490 | 0.808170 | 3.533243e-50 | -8.615850e-47 |
| Msa0442270 | Msa1379850 | 0.802217 | 6.228683e-49 | -8.615850e-47 |
| Msa0442270 | Msa1410390 | 0.803247 | 3.818166e-49 | -8.615850e-47 |
| Msa0442270 | Msa1417810 | -0.805906 | 1.064433e-49 | -8.615850e-47 |
| Msa0442270 | Msa1431060 | 0.802851 | 4.610932e-49 | -8.615850e-47 |
| Msa0442270 | Msa1433220 | 0.803044 | 4.206945e-49 | -8.615850e-47 |
| Msa0442270 | Msa1435400 | 0.803267 | 3.783061e-49 | -8.615850e-47 |
| Msa0442270 | Msa1445400 | -0.806526 | 7.881657e-50 | -8.615850e-47 |
| Msa0442270 | Msa1447150 | 0.836098 | 1.141767e-56 | -8.615850e-47 |
| Msa0442270 | Msa1449350 | -0.815851 | 7.479626e-52 | -8.615850e-47 |
| Msa0269520 | Msa0442270 | 0.827094 | 1.891131e-54 | -8.615850e-47 |
| Msa0274630 | Msa0442270 | 0.813210 | 2.872515e-51 | -8.615850e-47 |
| Msa0299580 | Msa0442270 | 0.810788 | 9.685125e-51 | -8.615850e-47 |
| Msa0314060 | Msa0442270 | 0.811165 | 8.025829e-51 | -8.615850e-47 |
| Msa0347670 | Msa0442270 | 0.894063 | 3.505346e-75 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0442270 | MtrunA17_Chr3g0080051 | 97.115 | 624 | 12 | 1 | 1 | 624 | 1 | 618 | 0.0 | 1267 |
| Msa0442270 | MtrunA17_Chr8g0369291 | 65.025 | 589 | 183 | 10 | 40 | 624 | 33 | 602 | 0.0 | 734 |
| Msa0442270 | MtrunA17_Chr1g0155521 | 45.946 | 629 | 311 | 15 | 4 | 624 | 13 | 620 | 8.38e-170 | 498 |
| Msa0442270 | MtrunA17_Chr3g0144911 | 54.369 | 412 | 180 | 4 | 4 | 414 | 13 | 417 | 3.09e-158 | 461 |
| Msa0442270 | MtrunA17_Chr7g0236461 | 43.548 | 620 | 305 | 9 | 1 | 616 | 1 | 579 | 9.48e-158 | 466 |
| Msa0442270 | MtrunA17_Chr4g0035391 | 41.587 | 630 | 332 | 13 | 4 | 624 | 13 | 615 | 1.81e-157 | 466 |
| Msa0442270 | MtrunA17_Chr3g0141821 | 43.072 | 599 | 290 | 11 | 9 | 605 | 7 | 556 | 8.60e-141 | 421 |
| Msa0442270 | MtrunA17_Chr5g0404711 | 57.742 | 310 | 128 | 2 | 34 | 343 | 10 | 316 | 6.30e-132 | 395 |
| Msa0442270 | MtrunA17_Chr3g0144891 | 39.085 | 568 | 290 | 10 | 40 | 605 | 37 | 550 | 3.59e-122 | 373 |
| Msa0442270 | MtrunA17_Chr8g0372651 | 38.929 | 560 | 267 | 12 | 62 | 606 | 39 | 538 | 1.19e-119 | 366 |
| Msa0442270 | MtrunA17_Chr4g0035361 | 39.139 | 511 | 245 | 11 | 103 | 605 | 2 | 454 | 7.72e-106 | 328 |
| Msa0442270 | MtrunA17_Chr5g0399151 | 46.753 | 308 | 159 | 2 | 37 | 344 | 54 | 356 | 1.75e-94 | 298 |
| Msa0442270 | MtrunA17_Chr4g0035381 | 50.558 | 269 | 132 | 1 | 78 | 346 | 60 | 327 | 1.90e-93 | 293 |
| Msa0442270 | MtrunA17_Chr4g0076441 | 27.917 | 240 | 158 | 6 | 97 | 332 | 26 | 254 | 1.20e-16 | 81.6 |
| Msa0442270 | MtrunA17_Chr3g0131581 | 28.800 | 250 | 156 | 8 | 67 | 315 | 36 | 264 | 1.43e-16 | 80.5 |
| Msa0442270 | MtrunA17_Chr3g0102691 | 30.180 | 222 | 135 | 6 | 97 | 310 | 26 | 235 | 1.95e-15 | 78.2 |
| Msa0442270 | MtrunA17_Chr2g0290661 | 28.910 | 211 | 141 | 5 | 102 | 310 | 38 | 241 | 3.95e-15 | 77.0 |
| Msa0442270 | MtrunA17_Chr8g0385681 | 26.613 | 248 | 160 | 8 | 73 | 317 | 21 | 249 | 1.41e-12 | 68.2 |
| Msa0442270 | MtrunA17_Chr8g0385691 | 26.693 | 251 | 156 | 8 | 73 | 317 | 18 | 246 | 3.32e-12 | 67.0 |
| Msa0442270 | MtrunA17_Chr4g0004981 | 30.045 | 223 | 126 | 11 | 103 | 313 | 126 | 330 | 8.18e-12 | 67.8 |
| Msa0442270 | MtrunA17_Chr1g0155071 | 27.016 | 248 | 152 | 10 | 72 | 313 | 15 | 239 | 4.18e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0442270 | AT1G55690.2 | 60.918 | 632 | 232 | 9 | 1 | 624 | 1 | 625 | 0.0 | 715 |
| Msa0442270 | AT1G55690.4 | 60.918 | 632 | 232 | 9 | 1 | 624 | 1 | 625 | 0.0 | 715 |
| Msa0442270 | AT1G55690.1 | 60.918 | 632 | 232 | 9 | 1 | 624 | 1 | 625 | 0.0 | 715 |
| Msa0442270 | AT1G55690.5 | 60.918 | 632 | 232 | 9 | 1 | 624 | 1 | 625 | 0.0 | 715 |
| Msa0442270 | AT1G55690.3 | 60.606 | 627 | 233 | 8 | 1 | 620 | 1 | 620 | 0.0 | 707 |
| Msa0442270 | AT5G56160.1 | 49.082 | 599 | 262 | 8 | 15 | 611 | 9 | 566 | 0.0 | 556 |
| Msa0442270 | AT5G56160.3 | 49.082 | 599 | 262 | 8 | 15 | 611 | 9 | 566 | 0.0 | 556 |
| Msa0442270 | AT2G21520.2 | 43.260 | 638 | 287 | 10 | 2 | 605 | 15 | 611 | 3.24e-172 | 504 |
| Msa0442270 | AT2G21520.3 | 43.260 | 638 | 287 | 10 | 2 | 605 | 15 | 611 | 3.24e-172 | 504 |
| Msa0442270 | AT2G21520.1 | 43.239 | 636 | 286 | 10 | 4 | 605 | 13 | 607 | 7.51e-171 | 501 |
| Msa0442270 | AT4G39170.2 | 43.810 | 630 | 314 | 13 | 4 | 624 | 13 | 611 | 1.83e-169 | 496 |
| Msa0442270 | AT4G39170.1 | 43.492 | 630 | 318 | 12 | 4 | 624 | 13 | 613 | 2.64e-169 | 496 |
| Msa0442270 | AT5G56160.2 | 66.000 | 350 | 115 | 3 | 15 | 363 | 9 | 355 | 3.13e-169 | 491 |
| Msa0442270 | AT1G19650.1 | 41.966 | 641 | 321 | 16 | 1 | 624 | 1 | 607 | 3.25e-149 | 444 |
| Msa0442270 | AT1G75370.1 | 41.838 | 631 | 325 | 12 | 4 | 624 | 13 | 611 | 2.65e-142 | 427 |
| Msa0442270 | AT1G75370.2 | 42.114 | 634 | 322 | 13 | 4 | 624 | 13 | 614 | 3.13e-141 | 426 |
| Msa0442270 | AT4G39180.3 | 55.587 | 349 | 151 | 3 | 14 | 362 | 11 | 355 | 9.75e-141 | 421 |
| Msa0442270 | AT4G39180.2 | 55.587 | 349 | 151 | 3 | 14 | 362 | 11 | 355 | 9.75e-141 | 421 |
| Msa0442270 | AT4G39180.1 | 55.587 | 349 | 151 | 3 | 14 | 362 | 11 | 355 | 1.04e-140 | 421 |
| Msa0442270 | AT3G24840.7 | 58.537 | 328 | 134 | 2 | 20 | 347 | 22 | 347 | 1.32e-137 | 414 |
| Msa0442270 | AT3G24840.7 | 46.575 | 73 | 39 | 0 | 542 | 614 | 487 | 559 | 6.61e-12 | 68.9 |
| Msa0442270 | AT3G24840.3 | 58.537 | 328 | 134 | 2 | 20 | 347 | 22 | 347 | 1.32e-137 | 414 |
| Msa0442270 | AT3G24840.3 | 46.575 | 73 | 39 | 0 | 542 | 614 | 487 | 559 | 6.61e-12 | 68.9 |
| Msa0442270 | AT3G24840.5 | 58.537 | 328 | 134 | 2 | 20 | 347 | 22 | 347 | 1.32e-137 | 414 |
| Msa0442270 | AT3G24840.5 | 46.575 | 73 | 39 | 0 | 542 | 614 | 487 | 559 | 6.61e-12 | 68.9 |
| Msa0442270 | AT3G24840.1 | 58.537 | 328 | 134 | 2 | 20 | 347 | 22 | 347 | 1.42e-137 | 414 |
| Msa0442270 | AT3G24840.1 | 46.575 | 73 | 39 | 0 | 542 | 614 | 486 | 558 | 6.78e-12 | 68.9 |
| Msa0442270 | AT3G24840.6 | 58.537 | 328 | 134 | 2 | 20 | 347 | 22 | 347 | 1.42e-137 | 414 |
| Msa0442270 | AT3G24840.6 | 46.575 | 73 | 39 | 0 | 542 | 614 | 486 | 558 | 6.78e-12 | 68.9 |
| Msa0442270 | AT3G24840.4 | 58.537 | 328 | 134 | 2 | 20 | 347 | 22 | 347 | 1.42e-137 | 414 |
| Msa0442270 | AT3G24840.4 | 46.575 | 73 | 39 | 0 | 542 | 614 | 486 | 558 | 6.78e-12 | 68.9 |
| Msa0442270 | AT3G24840.2 | 58.537 | 328 | 134 | 2 | 20 | 347 | 22 | 347 | 1.42e-137 | 414 |
| Msa0442270 | AT3G24840.2 | 46.575 | 73 | 39 | 0 | 542 | 614 | 486 | 558 | 6.78e-12 | 68.9 |
| Msa0442270 | AT1G19650.3 | 51.551 | 419 | 184 | 10 | 1 | 412 | 1 | 407 | 1.45e-137 | 409 |
| Msa0442270 | AT2G21540.6 | 49.875 | 401 | 181 | 5 | 14 | 405 | 11 | 400 | 1.63e-135 | 407 |
| Msa0442270 | AT2G21540.2 | 49.875 | 401 | 181 | 5 | 14 | 405 | 11 | 400 | 1.63e-135 | 407 |
| Msa0442270 | AT2G21540.1 | 49.875 | 401 | 181 | 5 | 14 | 405 | 11 | 400 | 1.63e-135 | 407 |
| Msa0442270 | AT2G21540.4 | 49.875 | 401 | 181 | 5 | 14 | 405 | 11 | 400 | 1.63e-135 | 407 |
| Msa0442270 | AT2G21540.3 | 55.786 | 337 | 144 | 3 | 14 | 350 | 11 | 342 | 1.93e-135 | 407 |
| Msa0442270 | AT2G21540.5 | 55.786 | 337 | 144 | 3 | 14 | 350 | 11 | 342 | 1.93e-135 | 407 |
| Msa0442270 | AT4G34580.2 | 54.655 | 333 | 148 | 3 | 13 | 345 | 1 | 330 | 2.01e-132 | 400 |
| Msa0442270 | AT4G34580.1 | 54.655 | 333 | 148 | 3 | 13 | 345 | 1 | 330 | 2.01e-132 | 400 |
| Msa0442270 | AT1G19650.2 | 41.481 | 540 | 269 | 12 | 99 | 624 | 29 | 535 | 5.93e-129 | 390 |
| Msa0442270 | AT2G18180.2 | 39.753 | 566 | 272 | 14 | 43 | 602 | 24 | 526 | 8.63e-128 | 387 |
| Msa0442270 | AT2G18180.1 | 39.753 | 566 | 272 | 14 | 43 | 602 | 24 | 526 | 1.79e-127 | 387 |
| Msa0442270 | AT4G36490.1 | 35.945 | 587 | 315 | 8 | 25 | 610 | 5 | 531 | 6.48e-127 | 385 |
| Msa0442270 | AT2G16380.2 | 52.888 | 329 | 152 | 3 | 19 | 347 | 7 | 332 | 5.05e-122 | 372 |
| Msa0442270 | AT2G16380.1 | 52.888 | 329 | 152 | 3 | 19 | 347 | 7 | 332 | 5.05e-122 | 372 |
| Msa0442270 | AT2G18180.4 | 39.223 | 515 | 246 | 13 | 102 | 610 | 10 | 463 | 8.43e-117 | 357 |
| Msa0442270 | AT2G18180.3 | 39.223 | 515 | 246 | 13 | 102 | 610 | 10 | 463 | 2.14e-116 | 356 |
| Msa0442270 | AT2G18180.5 | 38.632 | 497 | 238 | 13 | 120 | 610 | 1 | 436 | 8.01e-109 | 335 |
| Msa0442270 | AT2G16380.3 | 58.772 | 228 | 93 | 1 | 120 | 347 | 1 | 227 | 8.47e-99 | 309 |
| Msa0442270 | AT5G47510.2 | 50.769 | 260 | 127 | 1 | 77 | 336 | 26 | 284 | 9.27e-93 | 290 |
| Msa0442270 | AT5G47510.1 | 50.769 | 260 | 127 | 1 | 77 | 336 | 25 | 283 | 2.54e-92 | 290 |
| Msa0442270 | AT5G47510.4 | 50.769 | 260 | 127 | 1 | 77 | 336 | 26 | 284 | 3.21e-92 | 290 |
| Msa0442270 | AT5G47510.3 | 51.542 | 227 | 109 | 1 | 110 | 336 | 2 | 227 | 2.44e-82 | 262 |
| Msa0442270 | AT1G55840.1 | 29.528 | 254 | 159 | 7 | 77 | 321 | 6 | 248 | 1.21e-17 | 85.1 |
| Msa0442270 | AT1G55840.2 | 29.694 | 229 | 146 | 6 | 97 | 321 | 4 | 221 | 2.14e-17 | 83.6 |
| Msa0442270 | AT1G01630.1 | 30.400 | 250 | 141 | 9 | 71 | 313 | 22 | 245 | 8.02e-17 | 81.3 |
| Msa0442270 | AT5G47730.4 | 29.048 | 210 | 140 | 4 | 103 | 310 | 39 | 241 | 5.70e-16 | 80.1 |
| Msa0442270 | AT5G47730.1 | 29.048 | 210 | 140 | 4 | 103 | 310 | 39 | 241 | 5.70e-16 | 80.1 |
| Msa0442270 | AT1G72160.1 | 25.103 | 243 | 156 | 10 | 88 | 317 | 150 | 379 | 5.78e-11 | 65.9 |
Find 149 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGTATAAGATTTGAATTT+TGG | 0.180122 | 3_3:-11738713 | Msa0442270:CDS |
| CCTGTATCTTTGCAATAGTT+TGG | 0.232046 | 3_3:+11740073 | None:intergenic |
| CAATTTGCTTAGCATTATTA+AGG | 0.247877 | 3_3:-11738814 | Msa0442270:CDS |
| AATGTAGTAATGATGAAATT+AGG | 0.250418 | 3_3:-11742149 | Msa0442270:CDS |
| TGCCTCGCCTCGGGCTTCCT+TGG | 0.252176 | 3_3:+11737891 | None:intergenic |
| AAAGGGGATCTTTGCCTTCT+AGG | 0.258656 | 3_3:-11741903 | Msa0442270:CDS |
| CTGTATCTTTGCAATAGTTT+GGG | 0.262582 | 3_3:+11740074 | None:intergenic |
| GTCAAAATTGTTCTGTTCAT+TGG | 0.274378 | 3_3:+11739556 | None:intergenic |
| ACTAGAGTGACATGAGAATT+TGG | 0.278548 | 3_3:-11737829 | Msa0442270:three_prime_UTR |
| GATTTCCTGATTCAGAAATT+AGG | 0.278825 | 3_3:-11742510 | Msa0442270:five_prime_UTR |
| TTTATCCTAATTTCTGAATC+AGG | 0.287861 | 3_3:+11742505 | None:intergenic |
| TCAATGCTGGTACTGGCTTT+AGG | 0.289975 | 3_3:-11740134 | Msa0442270:CDS |
| GAAGGCAAGTTTAAGTCTTT+TGG | 0.290672 | 3_3:-11739513 | Msa0442270:intron |
| GAGATTGGATGTTGAGTATT+CGG | 0.297804 | 3_3:-11742121 | Msa0442270:CDS |
| GCTTGAAATTAATGATTTAC+TGG | 0.298005 | 3_3:-11738325 | Msa0442270:CDS |
| AAATTAGGATAAACTTTCTT+TGG | 0.301658 | 3_3:-11742495 | Msa0442270:five_prime_UTR |
| ATCCCCTTTCGACAAGTCTT+TGG | 0.312939 | 3_3:+11741917 | None:intergenic |
| AACATTACCTTCATGATATC+AGG | 0.313347 | 3_3:+11739744 | None:intergenic |
| GTCATTGCAAACTAATGATA+TGG | 0.327390 | 3_3:-11739076 | Msa0442270:CDS |
| GCCTCGCCTCGGGCTTCCTT+GGG | 0.328711 | 3_3:+11737892 | None:intergenic |
| ATTCTAAAATCGGAACTCTT+AGG | 0.336366 | 3_3:-11742080 | Msa0442270:CDS |
| GAAATCTCTATATAAATTAC+AGG | 0.365965 | 3_3:-11739947 | Msa0442270:CDS |
| GGCGAGGCATTCAAGTCTAA+TGG | 0.366040 | 3_3:-11737877 | Msa0442270:three_prime_UTR |
| GGAGAAGGAGCAAATGCTTA+TGG | 0.367860 | 3_3:-11738517 | Msa0442270:CDS |
| CTTACGTGGCGAAAGGAGTA+TGG | 0.370156 | 3_3:-11741601 | Msa0442270:CDS |
| CGCTTAAGAAAAGAGGAAAA+AGG | 0.373644 | 3_3:-11742020 | Msa0442270:CDS |
| AAACTTACTTCTTCACAAAC+TGG | 0.377431 | 3_3:+11739289 | None:intergenic |
| CGGTTTACATTGAGAGGCTT+GGG | 0.379178 | 3_3:-11740801 | Msa0442270:CDS |
| ACATGAACCACCAAGAAAAT+CGG | 0.380730 | 3_3:+11739821 | None:intergenic |
| CTGGCTTTAGGAAGATGCTT+TGG | 0.389604 | 3_3:-11740122 | Msa0442270:CDS |
| ATGTAGTAATGATGAAATTA+GGG | 0.392654 | 3_3:-11742148 | Msa0442270:CDS |
| ACAAGTGCTGACATCCTTCA+TGG | 0.393015 | 3_3:-11738757 | Msa0442270:CDS |
| TCCTTTAAAAGTCAGATATC+AGG | 0.394555 | 3_3:-11737944 | Msa0442270:three_prime_UTR |
| TGAAATTAGGGAGAGGAGAT+TGG | 0.397972 | 3_3:-11742136 | Msa0442270:CDS |
| CACCAAGAAAATCGGGCAAC+TGG | 0.403587 | 3_3:+11739829 | None:intergenic |
| CAAGTCTTTGGCGCAATTCA+AGG | 0.405426 | 3_3:+11741929 | None:intergenic |
| CTGGTGAAGGTGGATGTCTT+AGG | 0.410160 | 3_3:-11739791 | Msa0442270:CDS |
| TGATAATCATCATGCCTAGA+AGG | 0.422308 | 3_3:+11741889 | None:intergenic |
| TTCTCCAAAGGCATGCCATC+AGG | 0.423462 | 3_3:+11738534 | None:intergenic |
| CCGGTTTACATTGAGAGGCT+TGG | 0.426846 | 3_3:-11740802 | Msa0442270:CDS |
| AGCGACTCTTCAGCAGAATC+AGG | 0.433420 | 3_3:-11739376 | Msa0442270:CDS |
| AGGCGACAATATTCTAAAAT+CGG | 0.434917 | 3_3:-11742090 | Msa0442270:CDS |
| ACTCATTCGCTTAAGAAAAG+AGG | 0.445590 | 3_3:-11742027 | Msa0442270:CDS |
| CCAAACTATTGCAAAGATAC+AGG | 0.446618 | 3_3:-11740073 | Msa0442270:intron |
| GCAAATGCTTATGGAATCCT+TGG | 0.448250 | 3_3:-11738508 | Msa0442270:CDS |
| TTGAGTATTCGGAAGAAGAT+AGG | 0.449049 | 3_3:-11742110 | Msa0442270:CDS |
| AATGTGTTGAAAGGATTTGA+AGG | 0.450145 | 3_3:-11742174 | Msa0442270:intron |
| CTGTAGTAGCCATTCACATC+TGG | 0.454523 | 3_3:+11739168 | None:intergenic |
| AACAACAATACTGGATGTAC+AGG | 0.455740 | 3_3:-11740641 | Msa0442270:CDS |
| CAAACCTGATGGCATGCCTT+TGG | 0.456974 | 3_3:-11738538 | Msa0442270:CDS |
| GCAATGACTGCTCACGAGTA+AGG | 0.461203 | 3_3:+11739091 | None:intergenic |
| ACGCGTTCTGTGGAATTTGA+TGG | 0.465779 | 3_3:+11738669 | None:intergenic |
| TACATTGTCAATGCTGGTAC+TGG | 0.471435 | 3_3:-11740141 | Msa0442270:CDS |
| AGACTTGAATGCCTCGCCTC+GGG | 0.474212 | 3_3:+11737882 | None:intergenic |
| CCAAGCCTCTCAATGTAAAC+CGG | 0.476962 | 3_3:+11740802 | None:intergenic |
| AGGTTACCATGGAGTTGATA+AGG | 0.479015 | 3_3:-11740833 | Msa0442270:CDS |
| GCGAGGCATTCAAGTCTAAT+GGG | 0.479882 | 3_3:-11737876 | Msa0442270:three_prime_UTR |
| TAGTATTATTACCTCAAGAA+TGG | 0.481409 | 3_3:+11741570 | None:intergenic |
| TTCATTTGGACTGAAATGTC+AGG | 0.483942 | 3_3:-11742470 | Msa0442270:intron |
| CAACTCCATGGTAACCTTGA+GGG | 0.488317 | 3_3:+11740839 | None:intergenic |
| ATATGGAGAATATTGCTTGT+AGG | 0.489787 | 3_3:-11739059 | Msa0442270:CDS |
| GCGCCAAAGACTTGTCGAAA+GGG | 0.494515 | 3_3:-11741920 | Msa0442270:CDS |
| ATAACTACATCTCCTTTGTC+TGG | 0.496146 | 3_3:+11739324 | None:intergenic |
| TGAGAAAACAATTGAGATGT+GGG | 0.499593 | 3_3:-11741632 | Msa0442270:CDS |
| AATCTGTCTCTTCGCTGCAA+TGG | 0.499997 | 3_3:+11740672 | None:intergenic |
| AGCAAATCTCTTGGCTTCCA+TGG | 0.500376 | 3_3:-11740293 | Msa0442270:CDS |
| AATCGGAACTCTTAGGAAGA+AGG | 0.505874 | 3_3:-11742073 | Msa0442270:CDS |
| CTCTGAAGACGTTGTTCACA+AGG | 0.509978 | 3_3:+11738591 | None:intergenic |
| CTACATCTCCTTTGTCTGGT+AGG | 0.510607 | 3_3:+11739328 | None:intergenic |
| TAGACTTGAATGCCTCGCCT+CGG | 0.511560 | 3_3:+11737881 | None:intergenic |
| CATGAACCACCAAGAAAATC+GGG | 0.518291 | 3_3:+11739822 | None:intergenic |
| TCTATGAACTTCTGTGCAGC+AGG | 0.519372 | 3_3:+11740099 | None:intergenic |
| ACGTCTTCAGAGGCTAGAAA+AGG | 0.520954 | 3_3:-11738580 | Msa0442270:CDS |
| GGTTCCACCAGTGGCTATTG+AGG | 0.523124 | 3_3:-11741983 | Msa0442270:CDS |
| TATTATTCTTGCAGCAGAGA+AGG | 0.523932 | 3_3:-11738002 | Msa0442270:intron |
| TTTGGAGCAGCTACTAATGA+AGG | 0.528797 | 3_3:-11742550 | Msa0442270:five_prime_UTR |
| CTCTCTCAAACTCTTGTACA+TGG | 0.528841 | 3_3:+11740722 | None:intergenic |
| AACGGACTTTATTCTATCCA+AGG | 0.531191 | 3_3:+11738491 | None:intergenic |
| ATGAAGGATGTCAGCACTTG+TGG | 0.531732 | 3_3:+11738759 | None:intergenic |
| CAAATGTACATTGTCAATGC+TGG | 0.538652 | 3_3:-11740147 | Msa0442270:CDS |
| ATGTGTTGAAAGGATTTGAA+GGG | 0.538914 | 3_3:-11742173 | Msa0442270:intron |
| AATACTGGATGTACAGGGCT+TGG | 0.540642 | 3_3:-11740635 | Msa0442270:intron |
| GTTAATAATGACGCGTTCTG+TGG | 0.541907 | 3_3:+11738659 | None:intergenic |
| TTGAGAAAACAATTGAGATG+TGG | 0.543568 | 3_3:-11741633 | Msa0442270:CDS |
| TGATGGCATGCCTTTGGAGA+AGG | 0.546033 | 3_3:-11738532 | Msa0442270:CDS |
| CGCGTTCTGTGGAATTTGAT+GGG | 0.546574 | 3_3:+11738670 | None:intergenic |
| TTCGCTGCAATGGAACATGC+TGG | 0.547083 | 3_3:+11740682 | None:intergenic |
| TTAGGTCTAACAAGGGTCCA+TGG | 0.550541 | 3_3:-11739773 | Msa0442270:CDS |
| AAAGCTTGTAAAGTCTCAAA+CGG | 0.552509 | 3_3:-11743104 | Msa0442270:intron |
| ATACCCTCTTTGTCTTCTCA+AGG | 0.552784 | 3_3:+11738460 | None:intergenic |
| GCGTACTGCAGCAAATCTCT+TGG | 0.558703 | 3_3:-11740302 | Msa0442270:CDS |
| GATCAACTTACTCGACACTT+CGG | 0.560086 | 3_3:+11738288 | None:intergenic |
| CGCAGCGAGTCTTTCCATGA+AGG | 0.560463 | 3_3:+11738743 | None:intergenic |
| TTTCAAATATCGATCTATTG+TGG | 0.561616 | 3_3:+11740747 | None:intergenic |
| CTAAGACATCCACCTTCACC+AGG | 0.567033 | 3_3:+11739792 | None:intergenic |
| TGTATCTTTGCAATAGTTTG+GGG | 0.567207 | 3_3:+11740075 | None:intergenic |
| ACCCAAGGAAGCCCGAGGCG+AGG | 0.570186 | 3_3:-11737893 | Msa0442270:three_prime_UTR |
| GAACTCAATAACAAACCTGA+TGG | 0.570432 | 3_3:-11738549 | Msa0442270:CDS |
| GTAGGCCGGTTTACATTGAG+AGG | 0.571661 | 3_3:-11740807 | Msa0442270:CDS |
| TTGATTCAATAGCTGCGGAA+TGG | 0.576539 | 3_3:+11738637 | None:intergenic |
| GGTGGTTCATGTAAATGTCC+TGG | 0.577495 | 3_3:-11739810 | Msa0442270:CDS |
| GTAATGATGAAATTAGGGAG+AGG | 0.577986 | 3_3:-11742143 | Msa0442270:CDS |
| AGCATTTGCTCCTTCTCCAA+AGG | 0.579422 | 3_3:+11738522 | None:intergenic |
| CTTGTGAACAACGTCTTCAG+AGG | 0.580555 | 3_3:-11738590 | Msa0442270:CDS |
| CTAACATCCTCAATAGCCAC+TGG | 0.581497 | 3_3:+11741976 | None:intergenic |
| TGCGCCAAAGACTTGTCGAA+AGG | 0.582230 | 3_3:-11741921 | Msa0442270:CDS |
| TATTATGAAGAAGAAGAGAG+AGG | 0.587827 | 3_3:+11743292 | None:intergenic |
| AGTTGATAAGGAAGGTAGGC+CGG | 0.589330 | 3_3:-11740821 | Msa0442270:CDS |
| TACCTTCCTTATCAACTCCA+TGG | 0.591048 | 3_3:+11740827 | None:intergenic |
| GTATTGCAGTATTACCCTCA+AGG | 0.591530 | 3_3:-11740853 | Msa0442270:CDS |
| ATGATATCAGGATCATTCCA+TGG | 0.591683 | 3_3:+11739756 | None:intergenic |
| CTTCTCAAGGTCAAACTCAA+CGG | 0.592403 | 3_3:+11738473 | None:intergenic |
| GTTCTGTTCATTGGACGCCC+TGG | 0.594168 | 3_3:+11739565 | None:intergenic |
| GTGATGTGCATCAAGCGACT+TGG | 0.595132 | 3_3:+11740769 | None:intergenic |
| CGCCAAAGACTTGTCGAAAG+GGG | 0.597902 | 3_3:-11741919 | Msa0442270:CDS |
| TGGATGTCTTAGGTCTAACA+AGG | 0.599523 | 3_3:-11739781 | Msa0442270:CDS |
| CTTCAGTGAGTGTAACTGAA+AGG | 0.601782 | 3_3:+11739532 | None:intergenic |
| TGACTATAGGGTTCCACCAG+TGG | 0.601959 | 3_3:-11741992 | Msa0442270:CDS |
| GTCAGGGTACCAGATGTGAA+TGG | 0.604172 | 3_3:-11739177 | Msa0442270:CDS |
| GAATGATCCTGATATCATGA+AGG | 0.604709 | 3_3:-11739751 | Msa0442270:intron |
| TACAGGAAGTAATTGACTCT+AGG | 0.605900 | 3_3:-11739930 | Msa0442270:intron |
| AGAAGTTGATTCAATAGCTG+CGG | 0.612265 | 3_3:+11738632 | None:intergenic |
| TGTAAATGTCCTGGTGAAGG+TGG | 0.614422 | 3_3:-11739801 | Msa0442270:CDS |
| AGAAATGCTTACGTGGCGAA+AGG | 0.615480 | 3_3:-11741608 | Msa0442270:CDS |
| TGGAACTGATACCATTCTTG+AGG | 0.619938 | 3_3:-11741581 | Msa0442270:intron |
| TACCATGGAGTTGATAAGGA+AGG | 0.620910 | 3_3:-11740829 | Msa0442270:CDS |
| TCAACTCCATGGTAACCTTG+AGG | 0.621566 | 3_3:+11740838 | None:intergenic |
| GGATGTTAGAGATGCACGAG+AGG | 0.621739 | 3_3:-11741962 | Msa0442270:CDS |
| CTTTCAGTTACACTCACTGA+AGG | 0.625497 | 3_3:-11739531 | Msa0442270:CDS |
| AGATAGCTGTTACTATCCTG+AGG | 0.625896 | 3_3:-11740263 | Msa0442270:intron |
| ATGATTTACTGGAGAACATG+CGG | 0.627372 | 3_3:-11738314 | Msa0442270:CDS |
| TAGCGTTTGAGAATGCTAAG+TGG | 0.630269 | 3_3:-11743162 | Msa0442270:five_prime_UTR |
| ACATCCTCAATAGCCACTGG+TGG | 0.631828 | 3_3:+11741979 | None:intergenic |
| TATTACCCTCAAGGTTACCA+TGG | 0.632301 | 3_3:-11740844 | Msa0442270:CDS |
| TTGACCTTGAGAAGACAAAG+AGG | 0.633659 | 3_3:-11738464 | Msa0442270:CDS |
| ATGGAGTTGATAAGGAAGGT+AGG | 0.634219 | 3_3:-11740825 | Msa0442270:CDS |
| GCTTGTAGGACAAATTCAGA+AGG | 0.637235 | 3_3:-11739045 | Msa0442270:intron |
| ACTCATCTCCTACCAGACAA+AGG | 0.643406 | 3_3:-11739336 | Msa0442270:CDS |
| TCATGTAAATGTCCTGGTGA+AGG | 0.645326 | 3_3:-11739804 | Msa0442270:CDS |
| TGACCTTGAGAAGACAAAGA+GGG | 0.648508 | 3_3:-11738463 | Msa0442270:intron |
| ATGATTATCATACATTGCTG+AGG | 0.651082 | 3_3:-11741876 | Msa0442270:intron |
| TTGGCGCAATTCAAGGACTG+CGG | 0.653716 | 3_3:+11741936 | None:intergenic |
| TCGAGCGTTGATCAGACCCA+AGG | 0.670134 | 3_3:-11737908 | Msa0442270:three_prime_UTR |
| TCACAAACTGGTGCTAAACG+AGG | 0.682295 | 3_3:+11739301 | None:intergenic |
| ATCAGACCCAAGGAAGCCCG+AGG | 0.687395 | 3_3:-11737898 | Msa0442270:three_prime_UTR |
| ACAACAATACTGGATGTACA+GGG | 0.693937 | 3_3:-11740640 | Msa0442270:CDS |
| TGTGGGAAGAAATGCTTACG+TGG | 0.704198 | 3_3:-11741615 | Msa0442270:CDS |
| GGATGTCTTAGGTCTAACAA+GGG | 0.722635 | 3_3:-11739780 | Msa0442270:CDS |
| TTAGCTATCAGGTAACGCGG+AGG | 0.734505 | 3_3:-11739609 | Msa0442270:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAATTTTATAAAAAAAT+TGG | + | chr3_3:11739608-11739627 | None:intergenic | 0.0% |
| !!! | ATTTAAAATATTTATATATA+AGG | - | chr3_3:11742629-11742648 | Msa0442270:intron | 0.0% |
| !! | TAAGTTTATAATGAAAAAAA+AGG | + | chr3_3:11737632-11737651 | None:intergenic | 10.0% |
| !!! | ACTTAATTATTTAATTTTTG+TGG | + | chr3_3:11737700-11737719 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTCATCATTA+AGG | - | chr3_3:11738033-11738052 | Msa0442270:intron | 10.0% |
| !!! | ACACATTTTATTTTATTTTT+TGG | + | chr3_3:11738632-11738651 | None:intergenic | 10.0% |
| !!! | AAATTTTATAAAAAAATTGG+AGG | + | chr3_3:11739605-11739624 | None:intergenic | 10.0% |
| !! | TAATAATTTGAAAATGTTGA+AGG | + | chr3_3:11737840-11737859 | None:intergenic | 15.0% |
| !!! | ATTTTTATGTTTGTAGAATT+TGG | - | chr3_3:11738251-11738270 | Msa0442270:intron | 15.0% |
| !! | AAATAGTTTGAAAAAAAATG+AGG | + | chr3_3:11739039-11739058 | None:intergenic | 15.0% |
| !! | AAATCAGAAAAAAAAAATGA+AGG | + | chr3_3:11739419-11739438 | None:intergenic | 15.0% |
| !! | TATTGTTATAAAATTGTTGA+AGG | - | chr3_3:11741862-11741881 | Msa0442270:intron | 15.0% |
| !! | AGAATTTGGAGAATTTATTA+AGG | - | chr3_3:11738265-11738284 | Msa0442270:intron | 20.0% |
| !! | AAATTAGGATAAACTTTCTT+TGG | - | chr3_3:11738389-11738408 | Msa0442270:intron | 20.0% |
| !! | TTATTTGATATCTATCACTT+TGG | - | chr3_3:11738439-11738458 | Msa0442270:intron | 20.0% |
| !!! | TGTATTTAAAATGTGTTGAA+AGG | - | chr3_3:11738701-11738720 | Msa0442270:CDS | 20.0% |
| !! | AATGTAGTAATGATGAAATT+AGG | - | chr3_3:11738735-11738754 | Msa0442270:CDS | 20.0% |
| !! | ATGTAGTAATGATGAAATTA+GGG | - | chr3_3:11738736-11738755 | Msa0442270:CDS | 20.0% |
| !! | AAAAAGGAAAATTGACTATA+GGG | - | chr3_3:11738880-11738899 | Msa0442270:intron | 20.0% |
| !!! | TGTCATAAATAAAAAGTGTT+AGG | - | chr3_3:11739150-11739169 | Msa0442270:CDS | 20.0% |
| !!! | TTTTATAAAAAAATTGGAGG+TGG | + | chr3_3:11739602-11739621 | None:intergenic | 20.0% |
| !! | CTTATGCTATCAATAATTAT+TGG | + | chr3_3:11739887-11739906 | None:intergenic | 20.0% |
| !!! | ATGTTTCATTTTCTTCTAAT+TGG | - | chr3_3:11739961-11739980 | Msa0442270:CDS | 20.0% |
| !! | GAAATCTCTATATAAATTAC+AGG | - | chr3_3:11740937-11740956 | Msa0442270:intron | 20.0% |
| !! | AGGAAAAAAAAAAAGTTAGT+GGG | + | chr3_3:11742031-11742050 | None:intergenic | 20.0% |
| !! | AAGGAAAAAAAAAAAGTTAG+TGG | + | chr3_3:11742032-11742051 | None:intergenic | 20.0% |
| !! | TATTTGTATATGTTAGTCTC+TGG | - | chr3_3:11738108-11738127 | Msa0442270:intron | 25.0% |
| ! | CTTGAATCAGTAATTTATGA+AGG | - | chr3_3:11738195-11738214 | Msa0442270:intron | 25.0% |
| ! | GGAGAATTTATTAAGGAATT+TGG | - | chr3_3:11738272-11738291 | Msa0442270:intron | 25.0% |
| ! | TATTTGTATGTTGCAGAATT+TGG | - | chr3_3:11738316-11738335 | Msa0442270:CDS | 25.0% |
| ! | TTTATCCTAATTTCTGAATC+AGG | + | chr3_3:11738382-11738401 | None:intergenic | 25.0% |
| !!! | AACTTTCTTTGGTTTTCATT+TGG | - | chr3_3:11738400-11738419 | Msa0442270:intron | 25.0% |
| ! | AATAAAATGTGTGTTGTGAT+TGG | - | chr3_3:11738640-11738659 | Msa0442270:CDS | 25.0% |
| ! | GAAAAAGGAAAATTGACTAT+AGG | - | chr3_3:11738879-11738898 | Msa0442270:intron | 25.0% |
| !!! | ATTAGCACTTTTGTTGTTTA+AGG | - | chr3_3:11739100-11739119 | Msa0442270:CDS | 25.0% |
| !!! | TTAGCACTTTTGTTGTTTAA+GGG | - | chr3_3:11739101-11739120 | Msa0442270:CDS | 25.0% |
| ! | TAGTATTATTACCTCAAGAA+TGG | + | chr3_3:11739317-11739336 | None:intergenic | 25.0% |
| ! | TTTAAGTCATAGCCATAAAA+AGG | - | chr3_3:11739338-11739357 | Msa0442270:CDS | 25.0% |
| ! | TATAACTCTCTTATAAGCTT+GGG | + | chr3_3:11739736-11739755 | None:intergenic | 25.0% |
| ! | ATATAACTCTCTTATAAGCT+TGG | + | chr3_3:11739737-11739756 | None:intergenic | 25.0% |
| ! | GATTATAGTTATAGAGACTT+TGG | + | chr3_3:11739771-11739790 | None:intergenic | 25.0% |
| ! | ATGCTATCAATAATTATTGG+AGG | + | chr3_3:11739884-11739903 | None:intergenic | 25.0% |
| ! | TTCAAATTCAAAATCCTTCA+AGG | + | chr3_3:11739999-11740018 | None:intergenic | 25.0% |
| ! | TTTCAAATATCGATCTATTG+TGG | + | chr3_3:11740140-11740159 | None:intergenic | 25.0% |
| ! | CAAACCTGATATTAGTAATA+AGG | + | chr3_3:11740314-11740333 | None:intergenic | 25.0% |
| ! | AGTAGATTGTTTATGTGTTT+AGG | - | chr3_3:11740386-11740405 | Msa0442270:intron | 25.0% |
| !! | GTTTAGGATTCTATGAAATA+TGG | - | chr3_3:11740402-11740421 | Msa0442270:intron | 25.0% |
| ! | CCTAAAAATCAATCTCTTTA+GGG | - | chr3_3:11740431-11740450 | Msa0442270:intron | 25.0% |
| !! | CAAAAAAGTTTCTTTGGAAA+CGG | + | chr3_3:11740659-11740678 | None:intergenic | 25.0% |
| ! | AGTCAAGAATCTGAAAATTA+GGG | + | chr3_3:11740916-11740935 | None:intergenic | 25.0% |
| ! | GTTAAATAGAAACTAGAATG+CGG | + | chr3_3:11741003-11741022 | None:intergenic | 25.0% |
| ! | ATCAGAATATCTACATTAGT+TGG | + | chr3_3:11741254-11741273 | None:intergenic | 25.0% |
| !!! | ATATTCTGATTTTAGCTATC+AGG | - | chr3_3:11741264-11741283 | Msa0442270:intron | 25.0% |
| !! | TACGAGTGTTTACTATTTTA+TGG | - | chr3_3:11741414-11741433 | Msa0442270:intron | 25.0% |
| !! | AGTGTTTACTATTTTATGGT+AGG | - | chr3_3:11741418-11741437 | Msa0442270:intron | 25.0% |
| ! | CTAATTCTTATCTTAACACA+CGG | - | chr3_3:11741627-11741646 | Msa0442270:CDS | 25.0% |
| !!! | ACTTTTTTTTTTTCCTTTCC+AGG | - | chr3_3:11742035-11742054 | Msa0442270:CDS | 25.0% |
| !! | CAATTTGCTTAGCATTATTA+AGG | - | chr3_3:11742070-11742089 | Msa0442270:CDS | 25.0% |
| !! | GCAGTATAAGATTTGAATTT+TGG | - | chr3_3:11742171-11742190 | Msa0442270:intron | 25.0% |
| ! | TTTGATTAAGTTTGATCTGA+TGG | - | chr3_3:11742478-11742497 | Msa0442270:five_prime_UTR | 25.0% |
| !!! | AAAATTTGTGTTTTTTCTGC+AGG | - | chr3_3:11742511-11742530 | Msa0442270:five_prime_UTR | 25.0% |
| ! | GCTTGAAATTAATGATTTAC+TGG | - | chr3_3:11742559-11742578 | Msa0442270:intron | 25.0% |
| !!! | CAAAAAAGTTTCTACTTTTG+AGG | + | chr3_3:11742731-11742750 | None:intergenic | 25.0% |
| ! | TATAGGTTTACAAACATATG+CGG | + | chr3_3:11742785-11742804 | None:intergenic | 25.0% |
| AAAGCTTGTAAAGTCTCAAA+CGG | - | chr3_3:11737780-11737799 | Msa0442270:three_prime_UTR | 30.0% | |
| ! | GTGTATGATGATGATAAATC+TGG | + | chr3_3:11737876-11737895 | None:intergenic | 30.0% |
| GATGAATCTAACATTTGTGA+AGG | + | chr3_3:11737898-11737917 | None:intergenic | 30.0% | |
| GATTTCCTGATTCAGAAATT+AGG | - | chr3_3:11738374-11738393 | Msa0442270:intron | 30.0% | |
| AATGTGTTGAAAGGATTTGA+AGG | - | chr3_3:11738710-11738729 | Msa0442270:CDS | 30.0% | |
| ATGTGTTGAAAGGATTTGAA+GGG | - | chr3_3:11738711-11738730 | Msa0442270:CDS | 30.0% | |
| !! | AGGCGACAATATTCTAAAAT+CGG | - | chr3_3:11738794-11738813 | Msa0442270:CDS | 30.0% |
| !! | ATTCTAAAATCGGAACTCTT+AGG | - | chr3_3:11738804-11738823 | Msa0442270:CDS | 30.0% |
| ATGATTATCATACATTGCTG+AGG | - | chr3_3:11739008-11739027 | Msa0442270:intron | 30.0% | |
| !! | GATTTTTAACTAAGCTACCT+TGG | - | chr3_3:11739062-11739081 | Msa0442270:CDS | 30.0% |
| TTGAGAAAACAATTGAGATG+TGG | - | chr3_3:11739251-11739270 | Msa0442270:intron | 30.0% | |
| TGAGAAAACAATTGAGATGT+GGG | - | chr3_3:11739252-11739271 | Msa0442270:intron | 30.0% | |
| ! | AAAGCAAATCTGCCTTTTTA+TGG | + | chr3_3:11739353-11739372 | None:intergenic | 30.0% |
| ! | TAAAAAGGCAGATTTGCTTT+AGG | - | chr3_3:11739353-11739372 | Msa0442270:CDS | 30.0% |
| CAATGCTTATATTTGGCATA+TGG | + | chr3_3:11739636-11739655 | None:intergenic | 30.0% | |
| GCATAGACAATGCTTATATT+TGG | + | chr3_3:11739643-11739662 | None:intergenic | 30.0% | |
| GGATAATTATCTATCCTTGA+AGG | - | chr3_3:11739982-11740001 | Msa0442270:intron | 30.0% | |
| !! | TTTTTCGACAACAACAATAC+TGG | - | chr3_3:11740234-11740253 | Msa0442270:intron | 30.0% |
| AGCACCTTATTACTAATATC+AGG | - | chr3_3:11740307-11740326 | Msa0442270:CDS | 30.0% | |
| CTGTTAATTATTCTCTGTGT+CGG | - | chr3_3:11740338-11740357 | Msa0442270:intron | 30.0% | |
| GCCTAAAAATCAATCTCTTT+AGG | - | chr3_3:11740430-11740449 | Msa0442270:intron | 30.0% | |
| !! | CCCTAAAGAGATTGATTTTT+AGG | + | chr3_3:11740434-11740453 | None:intergenic | 30.0% |
| TAATTGAAATGTGTGATGCA+GGG | - | chr3_3:11740544-11740563 | Msa0442270:intron | 30.0% | |
| ACGCAACAAAAAAGTTTCTT+TGG | + | chr3_3:11740665-11740684 | None:intergenic | 30.0% | |
| TCATCACATAGAAACGAAAA+GGG | + | chr3_3:11740688-11740707 | None:intergenic | 30.0% | |
| ATCATCACATAGAAACGAAA+AGG | + | chr3_3:11740689-11740708 | None:intergenic | 30.0% | |
| GTAATGTCTGCAAATACAAA+CGG | + | chr3_3:11740715-11740734 | None:intergenic | 30.0% | |
| TGTATCTTTGCAATAGTTTG+GGG | + | chr3_3:11740812-11740831 | None:intergenic | 30.0% | |
| CTGTATCTTTGCAATAGTTT+GGG | + | chr3_3:11740813-11740832 | None:intergenic | 30.0% | |
| GAGTCAAGAATCTGAAAATT+AGG | + | chr3_3:11740917-11740936 | None:intergenic | 30.0% | |
| AACATTACCTTCATGATATC+AGG | + | chr3_3:11741143-11741162 | None:intergenic | 30.0% | |
| ! | CCATACATATTTTCAAAAGC+TGG | + | chr3_3:11741200-11741219 | None:intergenic | 30.0% |
| !! | CCAGCTTTTGAAAATATGTA+TGG | - | chr3_3:11741197-11741216 | Msa0442270:intron | 30.0% |
| GTCAAAATTGTTCTGTTCAT+TGG | + | chr3_3:11741331-11741350 | None:intergenic | 30.0% | |
| ! | TCTTTTGGTCATGAAAAAGT+TGG | - | chr3_3:11741386-11741405 | Msa0442270:intron | 30.0% |
| ! | CTTTTGGTCATGAAAAAGTT+GGG | - | chr3_3:11741387-11741406 | Msa0442270:intron | 30.0% |
| ! | CAATAAGATTGTCATTTGCA+AGG | + | chr3_3:11741452-11741471 | None:intergenic | 30.0% |
| AAACTTACTTCTTCACAAAC+TGG | + | chr3_3:11741598-11741617 | None:intergenic | 30.0% | |
| GTCATTGCAAACTAATGATA+TGG | - | chr3_3:11741808-11741827 | Msa0442270:intron | 30.0% | |
| ATATGGAGAATATTGCTTGT+AGG | - | chr3_3:11741825-11741844 | Msa0442270:intron | 30.0% | |
| GAAAGGAACGCAAATATAAT+TGG | + | chr3_3:11741894-11741913 | None:intergenic | 30.0% | |
| CTCTATATACGATATGTGAA+AGG | + | chr3_3:11741911-11741930 | None:intergenic | 30.0% | |
| ACATATCCCCTTGTAATATT+TGG | - | chr3_3:11741941-11741960 | Msa0442270:CDS | 30.0% | |
| TCGAAGTCCAAATATTACAA+GGG | + | chr3_3:11741951-11741970 | None:intergenic | 30.0% | |
| TTCGAAGTCCAAATATTACA+AGG | + | chr3_3:11741952-11741971 | None:intergenic | 30.0% | |
| TAATATTTGGACTTCGAAGT+TGG | - | chr3_3:11741954-11741973 | Msa0442270:CDS | 30.0% | |
| AAAAAAAAGTTAGTGGGAAG+TGG | + | chr3_3:11742025-11742044 | None:intergenic | 30.0% | |
| TATAAGGAACATACTTGAAG+AGG | - | chr3_3:11742645-11742664 | Msa0442270:intron | 30.0% | |
| AAGAAGTAAACTTGAAGAGA+AGG | - | chr3_3:11742700-11742719 | Msa0442270:intron | 30.0% | |
| ! | TCCTTTAAAAGTCAGATATC+AGG | - | chr3_3:11742940-11742959 | Msa0442270:intron | 30.0% |
| TTCATTTGGACTGAAATGTC+AGG | - | chr3_3:11738414-11738433 | Msa0442270:intron | 35.0% | |
| GTAATGATGAAATTAGGGAG+AGG | - | chr3_3:11738741-11738760 | Msa0442270:CDS | 35.0% | |
| GAGATTGGATGTTGAGTATT+CGG | - | chr3_3:11738763-11738782 | Msa0442270:CDS | 35.0% | |
| TTGAGTATTCGGAAGAAGAT+AGG | - | chr3_3:11738774-11738793 | Msa0442270:CDS | 35.0% | |
| ACTCATTCGCTTAAGAAAAG+AGG | - | chr3_3:11738857-11738876 | Msa0442270:intron | 35.0% | |
| CGCTTAAGAAAAGAGGAAAA+AGG | - | chr3_3:11738864-11738883 | Msa0442270:intron | 35.0% | |
| TGATAATCATCATGCCTAGA+AGG | + | chr3_3:11738998-11739017 | None:intergenic | 35.0% | |
| !!! | TACCTTGGAGAACTGTTTTT+TGG | - | chr3_3:11739077-11739096 | Msa0442270:CDS | 35.0% |
| ATCCAAAAAACAGTTCTCCA+AGG | + | chr3_3:11739082-11739101 | None:intergenic | 35.0% | |
| TCTTGTTGATCTGTATTTCC+CGG | - | chr3_3:11739199-11739218 | Msa0442270:intron | 35.0% | |
| !! | TCTAGCTTTAAGAAACCTAC+CGG | + | chr3_3:11739221-11739240 | None:intergenic | 35.0% |
| GGTGTAACAGAAGGATAATT+AGG | - | chr3_3:11739390-11739409 | Msa0442270:intron | 35.0% | |
| AGCTCATACTTGTACATGAA+TGG | - | chr3_3:11739518-11739537 | Msa0442270:CDS | 35.0% | |
| GCTCATACTTGTACATGAAT+GGG | - | chr3_3:11739519-11739538 | Msa0442270:CDS | 35.0% | |
| TGGGTTGTTGATACAGTATT+AGG | - | chr3_3:11739538-11739557 | Msa0442270:CDS | 35.0% | |
| GGGTTGTTGATACAGTATTA+GGG | - | chr3_3:11739539-11739558 | Msa0442270:CDS | 35.0% | |
| CAAGAGCTATTTATGCTTGA+TGG | + | chr3_3:11739836-11739855 | None:intergenic | 35.0% | |
| TCAAGCATAAATAGCTCTTG+CGG | - | chr3_3:11739836-11739855 | Msa0442270:intron | 35.0% | |
| ! | GGATTTTGAATTTGAAGAGC+TGG | - | chr3_3:11740003-11740022 | Msa0442270:intron | 35.0% |
| AACAACAATACTGGATGTAC+AGG | - | chr3_3:11740243-11740262 | Msa0442270:intron | 35.0% | |
| ACAACAATACTGGATGTACA+GGG | - | chr3_3:11740244-11740263 | Msa0442270:intron | 35.0% | |
| CGACACAGAGAATAATTAAC+AGG | + | chr3_3:11740340-11740359 | None:intergenic | 35.0% | |
| GTTTCAACAACTTGCAAACA+AGG | + | chr3_3:11740500-11740519 | None:intergenic | 35.0% | |
| GTAATTGAAATGTGTGATGC+AGG | - | chr3_3:11740543-11740562 | Msa0442270:intron | 35.0% | |
| !!! | ACAGCTATCTATTTTAGCCA+TGG | + | chr3_3:11740611-11740630 | None:intergenic | 35.0% |
| ! | AAAGTTTCTTTGGAAACGGA+CGG | + | chr3_3:11740655-11740674 | None:intergenic | 35.0% |
| CAAATGTACATTGTCAATGC+TGG | - | chr3_3:11740737-11740756 | Msa0442270:CDS | 35.0% | |
| CCTGTATCTTTGCAATAGTT+TGG | + | chr3_3:11740814-11740833 | None:intergenic | 35.0% | |
| CCAAACTATTGCAAAGATAC+AGG | - | chr3_3:11740811-11740830 | Msa0442270:CDS | 35.0% | |
| TATTGCAAAGATACAGGTGA+AGG | - | chr3_3:11740817-11740836 | Msa0442270:CDS | 35.0% | |
| ! | TACAGGAAGTAATTGACTCT+AGG | - | chr3_3:11740954-11740973 | Msa0442270:intron | 35.0% |
| ACTAGAATGCGGTATAATGA+AGG | + | chr3_3:11740992-11741011 | None:intergenic | 35.0% | |
| ACATGAACCACCAAGAAAAT+CGG | + | chr3_3:11741066-11741085 | None:intergenic | 35.0% | |
| ATGATATCAGGATCATTCCA+TGG | + | chr3_3:11741131-11741150 | None:intergenic | 35.0% | |
| GAATGATCCTGATATCATGA+AGG | - | chr3_3:11741133-11741152 | Msa0442270:intron | 35.0% | |
| TACCTTGTCAAACTAGCATT+TGG | - | chr3_3:11741228-11741247 | Msa0442270:intron | 35.0% | |
| !!! | ATTTTAGCTATCAGGTAACG+CGG | - | chr3_3:11741272-11741291 | Msa0442270:intron | 35.0% |
| ! | GAAGGCAAGTTTAAGTCTTT+TGG | - | chr3_3:11741371-11741390 | Msa0442270:intron | 35.0% |
| ! | TAACTATTTTCTCATCTCCC+AGG | - | chr3_3:11741477-11741496 | Msa0442270:intron | 35.0% |
| ! | AACTATTTTCTCATCTCCCA+GGG | - | chr3_3:11741478-11741497 | Msa0442270:intron | 35.0% |
| ATAACTACATCTCCTTTGTC+TGG | + | chr3_3:11741563-11741582 | None:intergenic | 35.0% | |
| ACAAGGGGATATGTACAATT+TGG | + | chr3_3:11741935-11741954 | None:intergenic | 35.0% | |
| CGAAGTCCAAATATTACAAG+GGG | + | chr3_3:11741950-11741969 | None:intergenic | 35.0% | |
| AGCTTAGCATGAATATTAGC+CGG | + | chr3_3:11741989-11742008 | None:intergenic | 35.0% | |
| ! | AGAAGTTGATTCAATAGCTG+CGG | + | chr3_3:11742255-11742274 | None:intergenic | 35.0% |
| GAACTCAATAACAAACCTGA+TGG | - | chr3_3:11742335-11742354 | Msa0442270:intron | 35.0% | |
| ! | AACGGACTTTATTCTATCCA+AGG | + | chr3_3:11742396-11742415 | None:intergenic | 35.0% |
| ! | TTAAGTTTGATCTGATGGTG+TGG | - | chr3_3:11742483-11742502 | Msa0442270:five_prime_UTR | 35.0% |
| ATGATTTACTGGAGAACATG+CGG | - | chr3_3:11742570-11742589 | Msa0442270:intron | 35.0% | |
| ! | CTGATGATGTTGCAACTTAT+AGG | + | chr3_3:11742802-11742821 | None:intergenic | 35.0% |
| !! | TGCTTGTGTGAGCTTTAAAT+TGG | - | chr3_3:11742834-11742853 | Msa0442270:intron | 35.0% |
| !! | GCTTGTGTGAGCTTTAAATT+GGG | - | chr3_3:11742835-11742854 | Msa0442270:intron | 35.0% |
| TATTATTCTTGCAGCAGAGA+AGG | - | chr3_3:11742882-11742901 | Msa0442270:intron | 35.0% | |
| ! | GCCTGATATCTGACTTTTAA+AGG | + | chr3_3:11742944-11742963 | None:intergenic | 35.0% |
| ACTAGAGTGACATGAGAATT+TGG | - | chr3_3:11743055-11743074 | Msa0442270:intron | 35.0% | |
| TAGCGTTTGAGAATGCTAAG+TGG | - | chr3_3:11737722-11737741 | Msa0442270:three_prime_UTR | 40.0% | |
| ! | TTTGGAGCAGCTACTAATGA+AGG | - | chr3_3:11738334-11738353 | Msa0442270:CDS | 40.0% |
| AGCCAGAATCTCGTTATTGT+GGG | - | chr3_3:11738566-11738585 | Msa0442270:CDS | 40.0% | |
| AACCCACAATAACGAGATTC+TGG | + | chr3_3:11738571-11738590 | None:intergenic | 40.0% | |
| ! | GTTATTGTGGGTTGAGTTTC+AGG | - | chr3_3:11738578-11738597 | Msa0442270:CDS | 40.0% |
| ! | ATGATTTTGTGCGTGTGTGT+GGG | - | chr3_3:11738664-11738683 | Msa0442270:CDS | 40.0% |
| TGAAATTAGGGAGAGGAGAT+TGG | - | chr3_3:11738748-11738767 | Msa0442270:CDS | 40.0% | |
| AATCGGAACTCTTAGGAAGA+AGG | - | chr3_3:11738811-11738830 | Msa0442270:CDS | 40.0% | |
| !! | CTAGCTTTAAGAAACCTACC+GGG | + | chr3_3:11739220-11739239 | None:intergenic | 40.0% |
| TGGAACTGATACCATTCTTG+AGG | - | chr3_3:11739303-11739322 | Msa0442270:CDS | 40.0% | |
| CTTTAGGCCACAGAATCTTT+CGG | - | chr3_3:11739369-11739388 | Msa0442270:CDS | 40.0% | |
| TGTTACACCGAAAGATTCTG+TGG | + | chr3_3:11739379-11739398 | None:intergenic | 40.0% | |
| ! | GAATCTTTCGGTGTAACAGA+AGG | - | chr3_3:11739381-11739400 | Msa0442270:CDS | 40.0% |
| ATGTACAAGTATGAGCTGTG+AGG | + | chr3_3:11739515-11739534 | None:intergenic | 40.0% | |
| TGAGTGTATGACTAAGCAAG+TGG | - | chr3_3:11739567-11739586 | Msa0442270:CDS | 40.0% | |
| ! | ACCTCAAGCAACAGTTGTTT+TGG | + | chr3_3:11739672-11739691 | None:intergenic | 40.0% |
| CTTATAAGCTTGGGCTGTTA+AGG | + | chr3_3:11739727-11739746 | None:intergenic | 40.0% | |
| !! | TGCTTGATGGTGTGCAAAAT+GGG | + | chr3_3:11739823-11739842 | None:intergenic | 40.0% |
| !! | ATGCTTGATGGTGTGCAAAA+TGG | + | chr3_3:11739824-11739843 | None:intergenic | 40.0% |
| CAAGCATAAATAGCTCTTGC+GGG | - | chr3_3:11739837-11739856 | Msa0442270:intron | 40.0% | |
| GTATTGCAGTATTACCCTCA+AGG | - | chr3_3:11740031-11740050 | Msa0442270:intron | 40.0% | |
| TATTACCCTCAAGGTTACCA+TGG | - | chr3_3:11740040-11740059 | Msa0442270:intron | 40.0% | |
| !! | AGGTTACCATGGAGTTGATA+AGG | - | chr3_3:11740051-11740070 | Msa0442270:intron | 40.0% |
| !! | TACCATGGAGTTGATAAGGA+AGG | - | chr3_3:11740055-11740074 | Msa0442270:intron | 40.0% |
| TACCTTCCTTATCAACTCCA+TGG | + | chr3_3:11740060-11740079 | None:intergenic | 40.0% | |
| !! | ATGGAGTTGATAAGGAAGGT+AGG | - | chr3_3:11740059-11740078 | Msa0442270:intron | 40.0% |
| CTCTCTCAAACTCTTGTACA+TGG | + | chr3_3:11740165-11740184 | None:intergenic | 40.0% | |
| ! | AATCTCTTTAGGGACTAGTG+AGG | - | chr3_3:11740441-11740460 | Msa0442270:intron | 40.0% |
| ! | ATCTCTTTAGGGACTAGTGA+GGG | - | chr3_3:11740442-11740461 | Msa0442270:intron | 40.0% |
| AGATAGCTGTTACTATCCTG+AGG | - | chr3_3:11740621-11740640 | Msa0442270:intron | 40.0% | |
| ! | AAGTTTCTTTGGAAACGGAC+GGG | + | chr3_3:11740654-11740673 | None:intergenic | 40.0% |
| TACATTGTCAATGCTGGTAC+TGG | - | chr3_3:11740743-11740762 | Msa0442270:CDS | 40.0% | |
| TATAAGATCAGTAACCTCGC+AGG | + | chr3_3:11740886-11740905 | None:intergenic | 40.0% | |
| CATGAACCACCAAGAAAATC+GGG | + | chr3_3:11741065-11741084 | None:intergenic | 40.0% | |
| TCATGTAAATGTCCTGGTGA+AGG | - | chr3_3:11741080-11741099 | Msa0442270:intron | 40.0% | |
| TGGATGTCTTAGGTCTAACA+AGG | - | chr3_3:11741103-11741122 | Msa0442270:intron | 40.0% | |
| GGATGTCTTAGGTCTAACAA+GGG | - | chr3_3:11741104-11741123 | Msa0442270:intron | 40.0% | |
| ! | TTTTGTGAGGCAAATCACCA+GGG | - | chr3_3:11741302-11741321 | Msa0442270:intron | 40.0% |
| CTTCAGTGAGTGTAACTGAA+AGG | + | chr3_3:11741355-11741374 | None:intergenic | 40.0% | |
| CTTTCAGTTACACTCACTGA+AGG | - | chr3_3:11741353-11741372 | Msa0442270:intron | 40.0% | |
| ! | ACTATTTTCTCATCTCCCAG+GGG | - | chr3_3:11741479-11741498 | Msa0442270:intron | 40.0% |
| GCTTGTAGGACAAATTCAGA+AGG | - | chr3_3:11741839-11741858 | Msa0442270:intron | 40.0% | |
| TCGAAGTTGGAAATACTTGC+CGG | - | chr3_3:11741967-11741986 | Msa0442270:CDS | 40.0% | |
| !! | TTTTTCCTTTCCAGGTACTG+CGG | - | chr3_3:11742043-11742062 | Msa0442270:CDS | 40.0% |
| GTTAATAATGACGCGTTCTG+TGG | + | chr3_3:11742228-11742247 | None:intergenic | 40.0% | |
| TTGATTCAATAGCTGCGGAA+TGG | + | chr3_3:11742250-11742269 | None:intergenic | 40.0% | |
| GCAAATGCTTATGGAATCCT+TGG | - | chr3_3:11742376-11742395 | Msa0442270:intron | 40.0% | |
| CTTCTCAAGGTCAAACTCAA+CGG | + | chr3_3:11742414-11742433 | None:intergenic | 40.0% | |
| TTGACCTTGAGAAGACAAAG+AGG | - | chr3_3:11742420-11742439 | Msa0442270:intron | 40.0% | |
| TGACCTTGAGAAGACAAAGA+GGG | - | chr3_3:11742421-11742440 | Msa0442270:intron | 40.0% | |
| ATACCCTCTTTGTCTTCTCA+AGG | + | chr3_3:11742427-11742446 | None:intergenic | 40.0% | |
| GATCAACTTACTCGACACTT+CGG | + | chr3_3:11742599-11742618 | None:intergenic | 40.0% | |
| GAGCCAGAATCTCGTTATTG+TGG | - | chr3_3:11738565-11738584 | Msa0442270:CDS | 45.0% | |
| GTTGAGTTTCAGGCAGTGAT+TGG | - | chr3_3:11738588-11738607 | Msa0442270:CDS | 45.0% | |
| ! | CATGATTTTGTGCGTGTGTG+TGG | - | chr3_3:11738663-11738682 | Msa0442270:CDS | 45.0% |
| CTAACATCCTCAATAGCCAC+TGG | + | chr3_3:11738911-11738930 | None:intergenic | 45.0% | |
| CAAGTCTTTGGCGCAATTCA+AGG | + | chr3_3:11738958-11738977 | None:intergenic | 45.0% | |
| ATCCCCTTTCGACAAGTCTT+TGG | + | chr3_3:11738970-11738989 | None:intergenic | 45.0% | |
| AAAGGGGATCTTTGCCTTCT+AGG | - | chr3_3:11738981-11739000 | Msa0442270:intron | 45.0% | |
| GTTGATCTGTATTTCCCGGT+AGG | - | chr3_3:11739203-11739222 | Msa0442270:intron | 45.0% | |
| TGTGGGAAGAAATGCTTACG+TGG | - | chr3_3:11739269-11739288 | Msa0442270:intron | 45.0% | |
| AGAAATGCTTACGTGGCGAA+AGG | - | chr3_3:11739276-11739295 | Msa0442270:intron | 45.0% | |
| TACAAGTATGAGCTGTGAGG+TGG | + | chr3_3:11739512-11739531 | None:intergenic | 45.0% | |
| ! | GCCAAAACAACTGTTGCTTG+AGG | - | chr3_3:11739668-11739687 | Msa0442270:intron | 45.0% |
| ATAAGCTTGGGCTGTTAAGG+TGG | + | chr3_3:11739724-11739743 | None:intergenic | 45.0% | |
| CAACTCCATGGTAACCTTGA+GGG | + | chr3_3:11740048-11740067 | None:intergenic | 45.0% | |
| TCAACTCCATGGTAACCTTG+AGG | + | chr3_3:11740049-11740068 | None:intergenic | 45.0% | |
| !! | AGTTGATAAGGAAGGTAGGC+CGG | - | chr3_3:11740063-11740082 | Msa0442270:intron | 45.0% |
| CCAAGCCTCTCAATGTAAAC+CGG | + | chr3_3:11740085-11740104 | None:intergenic | 45.0% | |
| CGGTTTACATTGAGAGGCTT+GGG | - | chr3_3:11740083-11740102 | Msa0442270:CDS | 45.0% | |
| AATCTGTCTCTTCGCTGCAA+TGG | + | chr3_3:11740215-11740234 | None:intergenic | 45.0% | |
| AATACTGGATGTACAGGGCT+TGG | - | chr3_3:11740249-11740268 | Msa0442270:intron | 45.0% | |
| ! | TCTCTTTAGGGACTAGTGAG+GGG | - | chr3_3:11740443-11740462 | Msa0442270:intron | 45.0% |
| AGCAAATCTCTTGGCTTCCA+TGG | - | chr3_3:11740591-11740610 | Msa0442270:intron | 45.0% | |
| !! | TCAATGCTGGTACTGGCTTT+AGG | - | chr3_3:11740750-11740769 | Msa0442270:CDS | 45.0% |
| !! | CTGGCTTTAGGAAGATGCTT+TGG | - | chr3_3:11740762-11740781 | Msa0442270:CDS | 45.0% |
| TCTATGAACTTCTGTGCAGC+AGG | + | chr3_3:11740788-11740807 | None:intergenic | 45.0% | |
| GCGGTATAATGAAGGAACAG+AGG | + | chr3_3:11740984-11741003 | None:intergenic | 45.0% | |
| GGTGGTTCATGTAAATGTCC+TGG | - | chr3_3:11741074-11741093 | Msa0442270:intron | 45.0% | |
| TGTAAATGTCCTGGTGAAGG+TGG | - | chr3_3:11741083-11741102 | Msa0442270:intron | 45.0% | |
| TTAGGTCTAACAAGGGTCCA+TGG | - | chr3_3:11741111-11741130 | Msa0442270:intron | 45.0% | |
| TCAAAAGCTGGCGCAAGTAA+GGG | + | chr3_3:11741188-11741207 | None:intergenic | 45.0% | |
| TTCAAAAGCTGGCGCAAGTA+AGG | + | chr3_3:11741189-11741208 | None:intergenic | 45.0% | |
| ! | GGCCAAATGCTAGTTTGACA+AGG | + | chr3_3:11741233-11741252 | None:intergenic | 45.0% |
| ! | CTTTTGTGAGGCAAATCACC+AGG | - | chr3_3:11741301-11741320 | Msa0442270:intron | 45.0% |
| ACTCATCTCCTACCAGACAA+AGG | - | chr3_3:11741548-11741567 | Msa0442270:intron | 45.0% | |
| CTACATCTCCTTTGTCTGGT+AGG | + | chr3_3:11741559-11741578 | None:intergenic | 45.0% | |
| ! | TCACAAACTGGTGCTAAACG+AGG | + | chr3_3:11741586-11741605 | None:intergenic | 45.0% |
| CTGTAGTAGCCATTCACATC+TGG | + | chr3_3:11741719-11741738 | None:intergenic | 45.0% | |
| ATGAAGGATGTCAGCACTTG+TGG | + | chr3_3:11742128-11742147 | None:intergenic | 45.0% | |
| !! | ACAAGTGCTGACATCCTTCA+TGG | - | chr3_3:11742127-11742146 | Msa0442270:CDS | 45.0% |
| CGCGTTCTGTGGAATTTGAT+GGG | + | chr3_3:11742217-11742236 | None:intergenic | 45.0% | |
| ACGCGTTCTGTGGAATTTGA+TGG | + | chr3_3:11742218-11742237 | None:intergenic | 45.0% | |
| ! | CTCTGAAGACGTTGTTCACA+AGG | + | chr3_3:11742296-11742315 | None:intergenic | 45.0% |
| CTTGTGAACAACGTCTTCAG+AGG | - | chr3_3:11742294-11742313 | Msa0442270:intron | 45.0% | |
| ACGTCTTCAGAGGCTAGAAA+AGG | - | chr3_3:11742304-11742323 | Msa0442270:intron | 45.0% | |
| AGCATTTGCTCCTTCTCCAA+AGG | + | chr3_3:11742365-11742384 | None:intergenic | 45.0% | |
| GGAGAAGGAGCAAATGCTTA+TGG | - | chr3_3:11742367-11742386 | Msa0442270:intron | 45.0% | |
| ! | GCGAGGCATTCAAGTCTAAT+GGG | - | chr3_3:11743008-11743027 | Msa0442270:intron | 45.0% |
| TCCGTAAGACCTAGCTCAAC+TGG | - | chr3_3:11738501-11738520 | Msa0442270:CDS | 50.0% | |
| GCCAGTTGAGCTAGGTCTTA+CGG | + | chr3_3:11738505-11738524 | None:intergenic | 50.0% | |
| CTGGCAATGCCGATATTGCT+AGG | - | chr3_3:11738520-11738539 | Msa0442270:CDS | 50.0% | |
| CAATGCCGATATTGCTAGGC+TGG | - | chr3_3:11738524-11738543 | Msa0442270:CDS | 50.0% | |
| GGTGTCCAGCCTAGCAATAT+CGG | + | chr3_3:11738532-11738551 | None:intergenic | 50.0% | |
| ! | ATTTTGTGCGTGTGTGTGGG+TGG | - | chr3_3:11738667-11738686 | Msa0442270:CDS | 50.0% |
| TGACTATAGGGTTCCACCAG+TGG | - | chr3_3:11738892-11738911 | Msa0442270:intron | 50.0% | |
| ACATCCTCAATAGCCACTGG+TGG | + | chr3_3:11738908-11738927 | None:intergenic | 50.0% | |
| GGATGTTAGAGATGCACGAG+AGG | - | chr3_3:11738922-11738941 | Msa0442270:intron | 50.0% | |
| TTGGCGCAATTCAAGGACTG+CGG | + | chr3_3:11738951-11738970 | None:intergenic | 50.0% | |
| TGCGCCAAAGACTTGTCGAA+AGG | - | chr3_3:11738963-11738982 | Msa0442270:intron | 50.0% | |
| GCGCCAAAGACTTGTCGAAA+GGG | - | chr3_3:11738964-11738983 | Msa0442270:intron | 50.0% | |
| CGCCAAAGACTTGTCGAAAG+GGG | - | chr3_3:11738965-11738984 | Msa0442270:intron | 50.0% | |
| CTTACGTGGCGAAAGGAGTA+TGG | - | chr3_3:11739283-11739302 | Msa0442270:intron | 50.0% | |
| AAGTATGAGCTGTGAGGTGG+AGG | + | chr3_3:11739509-11739528 | None:intergenic | 50.0% | |
| GCATAAATAGCTCTTGCGGG+AGG | - | chr3_3:11739840-11739859 | Msa0442270:intron | 50.0% | |
| TAAATAGCTCTTGCGGGAGG+CGG | - | chr3_3:11739843-11739862 | Msa0442270:intron | 50.0% | |
| ! | GTAGGCCGGTTTACATTGAG+AGG | - | chr3_3:11740077-11740096 | Msa0442270:CDS | 50.0% |
| CCGGTTTACATTGAGAGGCT+TGG | - | chr3_3:11740082-11740101 | Msa0442270:CDS | 50.0% | |
| GTGATGTGCATCAAGCGACT+TGG | + | chr3_3:11740118-11740137 | None:intergenic | 50.0% | |
| TTCGCTGCAATGGAACATGC+TGG | + | chr3_3:11740205-11740224 | None:intergenic | 50.0% | |
| ! | CTCTTTAGGGACTAGTGAGG+GGG | - | chr3_3:11740444-11740463 | Msa0442270:intron | 50.0% |
| GCGTACTGCAGCAAATCTCT+TGG | - | chr3_3:11740582-11740601 | Msa0442270:intron | 50.0% | |
| ACGGACGGGATAAAAACCTC+AGG | + | chr3_3:11740640-11740659 | None:intergenic | 50.0% | |
| TTACATGCTCTTCTCCTGCG+AGG | - | chr3_3:11740869-11740888 | Msa0442270:CDS | 50.0% | |
| ! | AGCCAGTTGCCCGATTTTCT+TGG | - | chr3_3:11741053-11741072 | Msa0442270:intron | 50.0% |
| CACCAAGAAAATCGGGCAAC+TGG | + | chr3_3:11741058-11741077 | None:intergenic | 50.0% | |
| ! | CAGTTGCCCGATTTTCTTGG+TGG | - | chr3_3:11741056-11741075 | Msa0442270:intron | 50.0% |
| CTAAGACATCCACCTTCACC+AGG | + | chr3_3:11741095-11741114 | None:intergenic | 50.0% | |
| CTGGTGAAGGTGGATGTCTT+AGG | - | chr3_3:11741093-11741112 | Msa0442270:intron | 50.0% | |
| TTAGCTATCAGGTAACGCGG+AGG | - | chr3_3:11741275-11741294 | Msa0442270:intron | 50.0% | |
| AGCGACTCTTCAGCAGAATC+AGG | - | chr3_3:11741508-11741527 | Msa0442270:intron | 50.0% | |
| ! | CACGGCATGTGCATTTTGTG+TGG | - | chr3_3:11741645-11741664 | Msa0442270:CDS | 50.0% |
| ! | ACCTAACCGCTGTCTTTTGC+AGG | - | chr3_3:11741685-11741704 | Msa0442270:intron | 50.0% |
| ACCTGCAAAAGACAGCGGTT+AGG | + | chr3_3:11741689-11741708 | None:intergenic | 50.0% | |
| ! | GTCAGGGTACCAGATGTGAA+TGG | - | chr3_3:11741707-11741726 | Msa0442270:intron | 50.0% |
| GCAATGACTGCTCACGAGTA+AGG | + | chr3_3:11741796-11741815 | None:intergenic | 50.0% | |
| AAATTGCTGACCGCAGTACC+TGG | + | chr3_3:11742056-11742075 | None:intergenic | 50.0% | |
| CAAACCTGATGGCATGCCTT+TGG | - | chr3_3:11742346-11742365 | Msa0442270:intron | 50.0% | |
| ! | TTCTCCAAAGGCATGCCATC+AGG | + | chr3_3:11742353-11742372 | None:intergenic | 50.0% |
| ! | TGATGGCATGCCTTTGGAGA+AGG | - | chr3_3:11742352-11742371 | Msa0442270:intron | 50.0% |
| TAGACTTGAATGCCTCGCCT+CGG | + | chr3_3:11743006-11743025 | None:intergenic | 50.0% | |
| ! | GGCGAGGCATTCAAGTCTAA+TGG | - | chr3_3:11743007-11743026 | Msa0442270:intron | 50.0% |
| TCGGCATTGCCAGTTGAGCT+AGG | + | chr3_3:11738513-11738532 | None:intergenic | 55.0% | |
| TAGGCTGGACACCTTCACCT+GGG | - | chr3_3:11738539-11738558 | Msa0442270:CDS | 55.0% | |
| GGTTCCACCAGTGGCTATTG+AGG | - | chr3_3:11738901-11738920 | Msa0442270:intron | 55.0% | |
| ! | GGACTAGTGAGGGGGTTCTT+TGG | - | chr3_3:11740452-11740471 | Msa0442270:intron | 55.0% |
| ! | ACGCGGAGGCAACTTTTGTG+AGG | - | chr3_3:11741289-11741308 | Msa0442270:intron | 55.0% |
| GTTCTGTTCATTGGACGCCC+TGG | + | chr3_3:11741322-11741341 | None:intergenic | 55.0% | |
| ! | ACCGCTGTCTTTTGCAGGTC+AGG | - | chr3_3:11741690-11741709 | Msa0442270:intron | 55.0% |
| CCCTGACCTGCAAAAGACAG+CGG | + | chr3_3:11741694-11741713 | None:intergenic | 55.0% | |
| ! | CCGCTGTCTTTTGCAGGTCA+GGG | - | chr3_3:11741691-11741710 | Msa0442270:intron | 55.0% |
| CGCAGCGAGTCTTTCCATGA+AGG | + | chr3_3:11742144-11742163 | None:intergenic | 55.0% | |
| !! | TCGAGCGTTGATCAGACCCA+AGG | - | chr3_3:11742976-11742995 | Msa0442270:intron | 55.0% |
| AGACTTGAATGCCTCGCCTC+GGG | + | chr3_3:11743005-11743024 | None:intergenic | 55.0% | |
| CTAGGCTGGACACCTTCACC+TGG | - | chr3_3:11738538-11738557 | Msa0442270:CDS | 60.0% | |
| ! | TCTGGCTCGAACCCAGGTGA+AGG | + | chr3_3:11738553-11738572 | None:intergenic | 60.0% |
| !! | CGAGATTCTGGCTCGAACCC+AGG | + | chr3_3:11738559-11738578 | None:intergenic | 60.0% |
| GCTGACCGCAGTACCTGGAA+AGG | + | chr3_3:11742051-11742070 | None:intergenic | 60.0% | |
| ATCAGACCCAAGGAAGCCCG+AGG | - | chr3_3:11742986-11743005 | Msa0442270:intron | 60.0% | |
| AGAGTCGCTGCATCGCCCCT+GGG | + | chr3_3:11741497-11741516 | None:intergenic | 65.0% | |
| AAGAGTCGCTGCATCGCCCC+TGG | + | chr3_3:11741498-11741517 | None:intergenic | 65.0% | |
| ACCCAAGGAAGCCCGAGGCG+AGG | - | chr3_3:11742991-11743010 | Msa0442270:intron | 70.0% | |
| GCCTCGCCTCGGGCTTCCTT+GGG | + | chr3_3:11742995-11743014 | None:intergenic | 70.0% | |
| TGCCTCGCCTCGGGCTTCCT+TGG | + | chr3_3:11742996-11743015 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 11737594 | 11743312 | 11737594 | ID=Msa0442270;Name=Msa0442270 |
| chr3_3 | mRNA | 11737594 | 11743312 | 11737594 | ID=Msa0442270-mRNA-1;Parent=Msa0442270;Name=Msa0442270-mRNA-1;_AED=0.08;_eAED=0.08;_QI=305|0.92|0.93|1|0.92|0.86|15|396|624 |
| chr3_3 | exon | 11737594 | 11738010 | 11737594 | ID=Msa0442270-mRNA-1:exon:2506;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11738299 | 11738373 | 11738299 | ID=Msa0442270-mRNA-1:exon:2505;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11738464 | 11738849 | 11738464 | ID=Msa0442270-mRNA-1:exon:2504;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11739046 | 11739199 | 11739046 | ID=Msa0442270-mRNA-1:exon:2503;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11739297 | 11739407 | 11739297 | ID=Msa0442270-mRNA-1:exon:2502;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11739514 | 11739627 | 11739514 | ID=Msa0442270-mRNA-1:exon:2501;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11739752 | 11739851 | 11739752 | ID=Msa0442270-mRNA-1:exon:2500;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11739931 | 11739980 | 11739931 | ID=Msa0442270-mRNA-1:exon:2499;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11740074 | 11740178 | 11740074 | ID=Msa0442270-mRNA-1:exon:2498;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11740264 | 11740341 | 11740264 | ID=Msa0442270-mRNA-1:exon:2497;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11740636 | 11740902 | 11740636 | ID=Msa0442270-mRNA-1:exon:2496;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11741582 | 11741681 | 11741582 | ID=Msa0442270-mRNA-1:exon:2495;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11741877 | 11742183 | 11741877 | ID=Msa0442270-mRNA-1:exon:2494;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11742471 | 11742574 | 11742471 | ID=Msa0442270-mRNA-1:exon:2493;Parent=Msa0442270-mRNA-1 |
| chr3_3 | exon | 11743105 | 11743312 | 11743105 | ID=Msa0442270-mRNA-1:exon:2492;Parent=Msa0442270-mRNA-1 |
| chr3_3 | five_prime_UTR | 11743105 | 11743312 | 11743105 | ID=Msa0442270-mRNA-1:five_prime_utr;Parent=Msa0442270-mRNA-1 |
| chr3_3 | five_prime_UTR | 11742478 | 11742574 | 11742478 | ID=Msa0442270-mRNA-1:five_prime_utr;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11742471 | 11742477 | 11742471 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11741877 | 11742183 | 11741877 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11741582 | 11741681 | 11741582 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11740636 | 11740902 | 11740636 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11740264 | 11740341 | 11740264 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11740074 | 11740178 | 11740074 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11739931 | 11739980 | 11739931 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11739752 | 11739851 | 11739752 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11739514 | 11739627 | 11739514 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11739297 | 11739407 | 11739297 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11739046 | 11739199 | 11739046 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11738464 | 11738849 | 11738464 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11738299 | 11738373 | 11738299 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | CDS | 11737990 | 11738010 | 11737990 | ID=Msa0442270-mRNA-1:cds;Parent=Msa0442270-mRNA-1 |
| chr3_3 | three_prime_UTR | 11737594 | 11737989 | 11737594 | ID=Msa0442270-mRNA-1:three_prime_utr;Parent=Msa0442270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
