Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506400 | XP_013460480.1 | 98.519 | 270 | 3 | 1 | 1 | 270 | 1 | 269 | 0.0 | 540 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506400 | sp|P55871|IF2B_MALDO | 79.336 | 271 | 52 | 4 | 1 | 268 | 1 | 270 | 1.93e-141 | 401 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506400 | A0A072UZG4 | 98.519 | 270 | 3 | 1 | 1 | 270 | 1 | 269 | 0.0 | 540 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004950 | Msa0506400 | 0.807979 | 3.879573e-50 | -8.615850e-47 |
| Msa0004980 | Msa0506400 | 0.804564 | 2.033089e-49 | -8.615850e-47 |
| Msa0020390 | Msa0506400 | 0.816005 | 6.910995e-52 | -8.615850e-47 |
| Msa0024710 | Msa0506400 | 0.803988 | 2.679723e-49 | -8.615850e-47 |
| Msa0027260 | Msa0506400 | 0.831736 | 1.409217e-55 | -8.615850e-47 |
| Msa0029260 | Msa0506400 | 0.835979 | 1.224385e-56 | -8.615850e-47 |
| Msa0032260 | Msa0506400 | 0.811247 | 7.700954e-51 | -8.615850e-47 |
| Msa0032580 | Msa0506400 | 0.801278 | 9.707872e-49 | -8.615850e-47 |
| Msa0032810 | Msa0506400 | 0.802578 | 5.250157e-49 | -8.615850e-47 |
| Msa0033880 | Msa0506400 | 0.803228 | 3.853899e-49 | -8.615850e-47 |
| Msa0043860 | Msa0506400 | 0.808035 | 3.773935e-50 | -8.615850e-47 |
| Msa0047160 | Msa0506400 | 0.828507 | 8.652041e-55 | -8.615850e-47 |
| Msa0048180 | Msa0506400 | 0.824540 | 7.638812e-54 | -8.615850e-47 |
| Msa0049390 | Msa0506400 | 0.804889 | 1.739562e-49 | -8.615850e-47 |
| Msa0059040 | Msa0506400 | 0.811049 | 8.501887e-51 | -8.615850e-47 |
| Msa0059110 | Msa0506400 | 0.805531 | 1.276112e-49 | -8.615850e-47 |
| Msa0061970 | Msa0506400 | 0.806890 | 6.602161e-50 | -8.615850e-47 |
| Msa0068020 | Msa0506400 | 0.834395 | 3.072114e-56 | -8.615850e-47 |
| Msa0073670 | Msa0506400 | 0.801545 | 8.559127e-49 | -8.615850e-47 |
| Msa0090520 | Msa0506400 | 0.803482 | 3.413902e-49 | -8.615850e-47 |
| Msa0094470 | Msa0506400 | 0.822063 | 2.893910e-53 | -8.615850e-47 |
| Msa0097610 | Msa0506400 | 0.801500 | 8.746126e-49 | -8.615850e-47 |
| Msa0097850 | Msa0506400 | 0.814053 | 1.873761e-51 | -8.615850e-47 |
| Msa0100740 | Msa0506400 | 0.820767 | 5.762299e-53 | -8.615850e-47 |
| Msa0109050 | Msa0506400 | 0.800007 | 1.763423e-48 | -8.615850e-47 |
| Msa0115370 | Msa0506400 | 0.805075 | 1.590020e-49 | -8.615850e-47 |
| Msa0115390 | Msa0506400 | 0.836257 | 1.040486e-56 | -8.615850e-47 |
| Msa0118540 | Msa0506400 | 0.824843 | 6.478845e-54 | -8.615850e-47 |
| Msa0121590 | Msa0506400 | 0.803268 | 3.779731e-49 | -8.615850e-47 |
| Msa0121820 | Msa0506400 | 0.821652 | 3.603816e-53 | -8.615850e-47 |
| Msa0122160 | Msa0506400 | 0.810127 | 1.345067e-50 | -8.615850e-47 |
| Msa0126770 | Msa0506400 | 0.806563 | 7.742090e-50 | -8.615850e-47 |
| Msa0126840 | Msa0506400 | 0.812198 | 4.783659e-51 | -8.615850e-47 |
| Msa0128860 | Msa0506400 | 0.829345 | 5.422518e-55 | -8.615850e-47 |
| Msa0137990 | Msa0506400 | 0.801312 | 9.556740e-49 | -8.615850e-47 |
| Msa0159170 | Msa0506400 | 0.802871 | 4.567180e-49 | -8.615850e-47 |
| Msa0159420 | Msa0506400 | 0.812055 | 5.138056e-51 | -8.615850e-47 |
| Msa0162130 | Msa0506400 | 0.802312 | 5.955216e-49 | -8.615850e-47 |
| Msa0165950 | Msa0506400 | 0.815786 | 7.732040e-52 | -8.615850e-47 |
| Msa0166750 | Msa0506400 | 0.811586 | 6.502293e-51 | -8.615850e-47 |
| Msa0167480 | Msa0506400 | 0.837723 | 4.392939e-57 | -8.615850e-47 |
| Msa0168800 | Msa0506400 | 0.810504 | 1.115570e-50 | -8.615850e-47 |
| Msa0169300 | Msa0506400 | 0.833468 | 5.240943e-56 | -8.615850e-47 |
| Msa0172970 | Msa0506400 | 0.805201 | 1.496608e-49 | -8.615850e-47 |
| Msa0174000 | Msa0506400 | 0.805007 | 1.642967e-49 | -8.615850e-47 |
| Msa0174730 | Msa0506400 | 0.827474 | 1.533369e-54 | -8.615850e-47 |
| Msa0180020 | Msa0506400 | 0.814809 | 1.274977e-51 | -8.615850e-47 |
| Msa0183460 | Msa0506400 | 0.829714 | 4.411184e-55 | -8.615850e-47 |
| Msa0183850 | Msa0506400 | 0.804554 | 2.043278e-49 | -8.615850e-47 |
| Msa0183900 | Msa0506400 | 0.805280 | 1.440382e-49 | -8.615850e-47 |
| Msa0187930 | Msa0506400 | 0.800425 | 1.449859e-48 | -8.615850e-47 |
| Msa0188350 | Msa0506400 | 0.832472 | 9.269670e-56 | -8.615850e-47 |
| Msa0189300 | Msa0506400 | 0.830562 | 2.738425e-55 | -8.615850e-47 |
| Msa0189520 | Msa0506400 | 0.820976 | 5.160295e-53 | -8.615850e-47 |
| Msa0190120 | Msa0506400 | 0.806782 | 6.959544e-50 | -8.615850e-47 |
| Msa0194480 | Msa0506400 | 0.811152 | 8.074753e-51 | -8.615850e-47 |
| Msa0194540 | Msa0506400 | 0.805743 | 1.151835e-49 | -8.615850e-47 |
| Msa0199690 | Msa0506400 | 0.808976 | 2.377189e-50 | -8.615850e-47 |
| Msa0199880 | Msa0506400 | 0.814374 | 1.591321e-51 | -8.615850e-47 |
| Msa0207670 | Msa0506400 | 0.833014 | 6.802488e-56 | -8.615850e-47 |
| Msa0208270 | Msa0506400 | 0.817354 | 3.444053e-52 | -8.615850e-47 |
| Msa0209350 | Msa0506400 | 0.823445 | 1.379759e-53 | -8.615850e-47 |
| Msa0209500 | Msa0506400 | 0.851494 | 8.555092e-61 | -8.615850e-47 |
| Msa0226330 | Msa0506400 | 0.826318 | 2.897482e-54 | -8.615850e-47 |
| Msa0226460 | Msa0506400 | 0.827399 | 1.598903e-54 | -8.615850e-47 |
| Msa0229360 | Msa0506400 | 0.802166 | 6.382699e-49 | -8.615850e-47 |
| Msa0231100 | Msa0506400 | 0.846846 | 1.680881e-59 | -8.615850e-47 |
| Msa0231660 | Msa0506400 | 0.832223 | 1.068565e-55 | -8.615850e-47 |
| Msa0231710 | Msa0506400 | 0.801930 | 7.135541e-49 | -8.615850e-47 |
| Msa0232050 | Msa0506400 | 0.802738 | 4.865406e-49 | -8.615850e-47 |
| Msa0236270 | Msa0506400 | 0.812389 | 4.344775e-51 | -8.615850e-47 |
| Msa0369220 | Msa0506400 | 0.803430 | 3.498667e-49 | -8.615850e-47 |
| Msa0376300 | Msa0506400 | 0.800105 | 1.684373e-48 | -8.615850e-47 |
| Msa0376690 | Msa0506400 | 0.819697 | 1.013688e-52 | -8.615850e-47 |
| Msa0384880 | Msa0506400 | 0.800173 | 1.631573e-48 | -8.615850e-47 |
| Msa0385490 | Msa0506400 | 0.811101 | 8.285601e-51 | -8.615850e-47 |
| Msa0385500 | Msa0506400 | 0.822555 | 2.225392e-53 | -8.615850e-47 |
| Msa0389510 | Msa0506400 | 0.804461 | 2.136793e-49 | -8.615850e-47 |
| Msa0397540 | Msa0506400 | 0.800017 | 1.755853e-48 | -8.615850e-47 |
| Msa0402790 | Msa0506400 | 0.808699 | 2.724227e-50 | -8.615850e-47 |
| Msa0403770 | Msa0506400 | 0.803240 | 3.830833e-49 | -8.615850e-47 |
| Msa0423750 | Msa0506400 | 0.818000 | 2.462238e-52 | -8.615850e-47 |
| Msa0427860 | Msa0506400 | -0.824492 | 7.839558e-54 | -8.615850e-47 |
| Msa0443390 | Msa0506400 | 0.858755 | 6.623731e-63 | -8.615850e-47 |
| Msa0458060 | Msa0506400 | 0.825585 | 4.326147e-54 | -8.615850e-47 |
| Msa0471590 | Msa0506400 | 0.821633 | 3.640239e-53 | -8.615850e-47 |
| Msa0474090 | Msa0506400 | -0.823900 | 1.079813e-53 | -8.615850e-47 |
| Msa0242410 | Msa0506400 | 0.814163 | 1.772220e-51 | -8.615850e-47 |
| Msa0244980 | Msa0506400 | 0.812383 | 4.358558e-51 | -8.615850e-47 |
| Msa0249580 | Msa0506400 | 0.805778 | 1.132785e-49 | -8.615850e-47 |
| Msa0257490 | Msa0506400 | 0.831394 | 1.711490e-55 | -8.615850e-47 |
| Msa0262310 | Msa0506400 | 0.806468 | 8.108662e-50 | -8.615850e-47 |
| Msa0262480 | Msa0506400 | 0.822173 | 2.729128e-53 | -8.615850e-47 |
| Msa0271360 | Msa0506400 | 0.806144 | 9.488813e-50 | -8.615850e-47 |
| Msa0271890 | Msa0506400 | 0.800469 | 1.420205e-48 | -8.615850e-47 |
| Msa0275360 | Msa0506400 | 0.817729 | 2.835145e-52 | -8.615850e-47 |
| Msa0280430 | Msa0506400 | 0.812378 | 4.369616e-51 | -8.615850e-47 |
| Msa0281530 | Msa0506400 | 0.811040 | 8.539368e-51 | -8.615850e-47 |
| Msa0283420 | Msa0506400 | 0.820304 | 7.362077e-53 | -8.615850e-47 |
| Msa0296250 | Msa0506400 | 0.820129 | 8.074422e-53 | -8.615850e-47 |
| Msa0296790 | Msa0506400 | 0.823931 | 1.061610e-53 | -8.615850e-47 |
| Msa0296920 | Msa0506400 | 0.812598 | 3.910842e-51 | -8.615850e-47 |
| Msa0300350 | Msa0506400 | 0.820846 | 5.528899e-53 | -8.615850e-47 |
| Msa0304590 | Msa0506400 | 0.833676 | 4.650817e-56 | -8.615850e-47 |
| Msa0304660 | Msa0506400 | 0.841053 | 5.999154e-58 | -8.615850e-47 |
| Msa0306710 | Msa0506400 | 0.822769 | 1.984011e-53 | -8.615850e-47 |
| Msa0309880 | Msa0506400 | 0.802112 | 6.546066e-49 | -8.615850e-47 |
| Msa0315850 | Msa0506400 | 0.810474 | 1.132466e-50 | -8.615850e-47 |
| Msa0320590 | Msa0506400 | 0.824245 | 8.960759e-54 | -8.615850e-47 |
| Msa0321690 | Msa0506400 | 0.809693 | 1.668266e-50 | -8.615850e-47 |
| Msa0331700 | Msa0506400 | 0.842300 | 2.813118e-58 | -8.615850e-47 |
| Msa0337650 | Msa0506400 | 0.814976 | 1.170899e-51 | -8.615850e-47 |
| Msa0347680 | Msa0506400 | 0.833563 | 4.963830e-56 | -8.615850e-47 |
| Msa0351990 | Msa0506400 | 0.801169 | 1.022255e-48 | -8.615850e-47 |
| Msa0357900 | Msa0506400 | 0.811896 | 5.567388e-51 | -8.615850e-47 |
| Msa0506400 | Msa0508590 | 0.846216 | 2.497035e-59 | -8.615850e-47 |
| Msa0506400 | Msa0508630 | 0.821407 | 4.103980e-53 | -8.615850e-47 |
| Msa0506400 | Msa0508870 | 0.813127 | 2.994988e-51 | -8.615850e-47 |
| Msa0506400 | Msa0511770 | 0.820640 | 6.164271e-53 | -8.615850e-47 |
| Msa0506400 | Msa0526540 | 0.835040 | 2.114545e-56 | -8.615850e-47 |
| Msa0506400 | Msa0534900 | 0.815274 | 1.005596e-51 | -8.615850e-47 |
| Msa0506400 | Msa0540550 | 0.806391 | 8.417678e-50 | -8.615850e-47 |
| Msa0506400 | Msa0542290 | 0.824369 | 8.377268e-54 | -8.615850e-47 |
| Msa0506400 | Msa0547160 | 0.827314 | 1.674932e-54 | -8.615850e-47 |
| Msa0506400 | Msa0556060 | 0.816507 | 5.337939e-52 | -8.615850e-47 |
| Msa0506400 | Msa0557480 | 0.817671 | 2.922275e-52 | -8.615850e-47 |
| Msa0506400 | Msa0561430 | 0.811569 | 6.557691e-51 | -8.615850e-47 |
| Msa0506400 | Msa0576940 | 0.830867 | 2.305165e-55 | -8.615850e-47 |
| Msa0506400 | Msa0580230 | 0.815641 | 8.329723e-52 | -8.615850e-47 |
| Msa0506400 | Msa0580280 | 0.800055 | 1.724568e-48 | -8.615850e-47 |
| Msa0506400 | Msa0581070 | 0.805991 | 1.021894e-49 | -8.615850e-47 |
| Msa0506400 | Msa0581110 | 0.835919 | 1.267456e-56 | -8.615850e-47 |
| Msa0506400 | Msa0581130 | 0.833314 | 5.725679e-56 | -8.615850e-47 |
| Msa0506400 | Msa0581280 | 0.804448 | 2.149482e-49 | -8.615850e-47 |
| Msa0506400 | Msa0588260 | 0.818024 | 2.431764e-52 | -8.615850e-47 |
| Msa0506400 | Msa0603570 | 0.850057 | 2.171205e-60 | -8.615850e-47 |
| Msa0506400 | Msa0607510 | 0.803928 | 2.758395e-49 | -8.615850e-47 |
| Msa0506400 | Msa0609220 | 0.800670 | 1.292781e-48 | -8.615850e-47 |
| Msa0506400 | Msa0610390 | 0.838396 | 2.949004e-57 | -8.615850e-47 |
| Msa0506400 | Msa0612720 | 0.825047 | 5.798808e-54 | -8.615850e-47 |
| Msa0506400 | Msa0615490 | 0.814278 | 1.670898e-51 | -8.615850e-47 |
| Msa0506400 | Msa0615580 | 0.868315 | 7.153782e-66 | -8.615850e-47 |
| Msa0506400 | Msa0615680 | 0.806562 | 7.743271e-50 | -8.615850e-47 |
| Msa0506400 | Msa0616240 | 0.838564 | 2.667827e-57 | -8.615850e-47 |
| Msa0506400 | Msa0631250 | 0.811050 | 8.496546e-51 | -8.615850e-47 |
| Msa0506400 | Msa0631350 | 0.832764 | 7.846839e-56 | -8.615850e-47 |
| Msa0506400 | Msa0642970 | 0.801365 | 9.320236e-49 | -8.615850e-47 |
| Msa0506400 | Msa0650920 | 0.834528 | 2.845766e-56 | -8.615850e-47 |
| Msa0506400 | Msa0654870 | 0.812222 | 4.726307e-51 | -8.615850e-47 |
| Msa0506400 | Msa0661300 | 0.803763 | 2.984543e-49 | -8.615850e-47 |
| Msa0506400 | Msa0666230 | 0.824832 | 6.518854e-54 | -8.615850e-47 |
| Msa0506400 | Msa0669720 | 0.869739 | 2.470598e-66 | -8.615850e-47 |
| Msa0506400 | Msa0669760 | 0.867145 | 1.698141e-65 | -8.615850e-47 |
| Msa0506400 | Msa0672100 | 0.808237 | 3.418886e-50 | -8.615850e-47 |
| Msa0506400 | Msa0682680 | 0.813117 | 3.010271e-51 | -8.615850e-47 |
| Msa0506400 | Msa0687630 | 0.815232 | 1.027308e-51 | -8.615850e-47 |
| Msa0506400 | Msa0692940 | 0.823334 | 1.464560e-53 | -8.615850e-47 |
| Msa0506400 | Msa0698540 | 0.836300 | 1.014729e-56 | -8.615850e-47 |
| Msa0506400 | Msa0699190 | 0.816734 | 4.745845e-52 | -8.615850e-47 |
| Msa0506400 | Msa0699570 | 0.839061 | 1.985272e-57 | -8.615850e-47 |
| Msa0506400 | Msa0702150 | 0.800102 | 1.687328e-48 | -8.615850e-47 |
| Msa0506400 | Msa0718740 | 0.800940 | 1.138253e-48 | -8.615850e-47 |
| Msa0506400 | Msa0719420 | 0.825767 | 3.917657e-54 | -8.615850e-47 |
| Msa0506400 | Msa0737600 | 0.809955 | 1.465245e-50 | -8.615850e-47 |
| Msa0506400 | Msa0747700 | 0.806375 | 8.479864e-50 | -8.615850e-47 |
| Msa0506400 | Msa0748920 | 0.802589 | 5.221931e-49 | -8.615850e-47 |
| Msa0506400 | Msa0751010 | 0.820152 | 7.978471e-53 | -8.615850e-47 |
| Msa0506400 | Msa0780880 | 0.807774 | 4.289876e-50 | -8.615850e-47 |
| Msa0506400 | Msa0780930 | 0.800137 | 1.659722e-48 | -8.615850e-47 |
| Msa0506400 | Msa0789680 | 0.825296 | 5.065531e-54 | -8.615850e-47 |
| Msa0506400 | Msa0792780 | 0.818563 | 1.836674e-52 | -8.615850e-47 |
| Msa0506400 | Msa0794050 | 0.818284 | 2.124368e-52 | -8.615850e-47 |
| Msa0506400 | Msa0800370 | 0.812430 | 4.257579e-51 | -8.615850e-47 |
| Msa0506400 | Msa0802410 | 0.819098 | 1.387817e-52 | -8.615850e-47 |
| Msa0506400 | Msa0805500 | 0.815663 | 8.237651e-52 | -8.615850e-47 |
| Msa0506400 | Msa0806880 | 0.812637 | 3.834689e-51 | -8.615850e-47 |
| Msa0506400 | Msa0816730 | 0.802439 | 5.607012e-49 | -8.615850e-47 |
| Msa0506400 | Msa0818170 | 0.812307 | 4.528271e-51 | -8.615850e-47 |
| Msa0506400 | Msa0818770 | 0.827026 | 1.963583e-54 | -8.615850e-47 |
| Msa0506400 | Msa0833190 | -0.821431 | 4.052109e-53 | -8.615850e-47 |
| Msa0506400 | Msa0884290 | 0.807491 | 4.925528e-50 | -8.615850e-47 |
| Msa0506400 | Msa0887250 | 0.843661 | 1.221709e-58 | -8.615850e-47 |
| Msa0506400 | Msa0892640 | 0.807337 | 5.309156e-50 | -8.615850e-47 |
| Msa0506400 | Msa0900110 | 0.812304 | 4.534538e-51 | -8.615850e-47 |
| Msa0506400 | Msa0901110 | 0.807833 | 4.166068e-50 | -8.615850e-47 |
| Msa0506400 | Msa0913240 | 0.817488 | 3.213640e-52 | -8.615850e-47 |
| Msa0506400 | Msa0923780 | 0.806446 | 8.195062e-50 | -8.615850e-47 |
| Msa0506400 | Msa0944200 | 0.811292 | 7.530160e-51 | -8.615850e-47 |
| Msa0506400 | Msa0944610 | 0.828534 | 8.521764e-55 | -8.615850e-47 |
| Msa0506400 | Msa0960830 | 0.801476 | 8.845482e-49 | -8.615850e-47 |
| Msa0506400 | Msa0974810 | 0.819850 | 9.350986e-53 | -8.615850e-47 |
| Msa0506400 | Msa0999970 | 0.808743 | 2.666369e-50 | -8.615850e-47 |
| Msa0506400 | Msa1006840 | 0.812414 | 4.290073e-51 | -8.615850e-47 |
| Msa0506400 | Msa1019240 | 0.854661 | 1.061080e-61 | -8.615850e-47 |
| Msa0506400 | Msa1019260 | 0.849313 | 3.503836e-60 | -8.615850e-47 |
| Msa0506400 | Msa1029050 | 0.815222 | 1.032618e-51 | -8.615850e-47 |
| Msa0506400 | Msa1037420 | 0.823624 | 1.253042e-53 | -8.615850e-47 |
| Msa0506400 | Msa1051210 | 0.805585 | 1.243158e-49 | -8.615850e-47 |
| Msa0506400 | Msa1070390 | 0.811844 | 5.713418e-51 | -8.615850e-47 |
| Msa0506400 | Msa1080290 | 0.817211 | 3.709955e-52 | -8.615850e-47 |
| Msa0506400 | Msa1081930 | 0.801768 | 7.705356e-49 | -8.615850e-47 |
| Msa0506400 | Msa1094430 | 0.801664 | 8.092138e-49 | -8.615850e-47 |
| Msa0506400 | Msa1104140 | 0.836140 | 1.114285e-56 | -8.615850e-47 |
| Msa0506400 | Msa1104210 | 0.866489 | 2.747363e-65 | -8.615850e-47 |
| Msa0506400 | Msa1106700 | 0.809785 | 1.594031e-50 | -8.615850e-47 |
| Msa0506400 | Msa1122820 | 0.802857 | 4.596906e-49 | -8.615850e-47 |
| Msa0506400 | Msa1123810 | 0.812270 | 4.614169e-51 | -8.615850e-47 |
| Msa0506400 | Msa1125790 | -0.817355 | 3.441744e-52 | -8.615850e-47 |
| Msa0506400 | Msa1126830 | 0.837898 | 3.960837e-57 | -8.615850e-47 |
| Msa0506400 | Msa1126850 | 0.841278 | 5.235947e-58 | -8.615850e-47 |
| Msa0506400 | Msa1131560 | 0.837283 | 5.694108e-57 | -8.615850e-47 |
| Msa0506400 | Msa1133250 | 0.804002 | 2.662009e-49 | -8.615850e-47 |
| Msa0506400 | Msa1138870 | 0.829662 | 4.541871e-55 | -8.615850e-47 |
| Msa0506400 | Msa1150500 | 0.804100 | 2.540385e-49 | -8.615850e-47 |
| Msa0506400 | Msa1165780 | 0.860650 | 1.781946e-63 | -8.615850e-47 |
| Msa0506400 | Msa1165960 | 0.833297 | 5.783915e-56 | -8.615850e-47 |
| Msa0506400 | Msa1166870 | 0.849819 | 2.531300e-60 | -8.615850e-47 |
| Msa0506400 | Msa1169550 | 0.811294 | 7.523927e-51 | -8.615850e-47 |
| Msa0506400 | Msa1179950 | 0.814572 | 1.438805e-51 | -8.615850e-47 |
| Msa0506400 | Msa1179980 | 0.825406 | 4.768714e-54 | -8.615850e-47 |
| Msa0506400 | Msa1201810 | 0.801970 | 7.002511e-49 | -8.615850e-47 |
| Msa0506400 | Msa1202580 | 0.835820 | 1.342779e-56 | -8.615850e-47 |
| Msa0506400 | Msa1211830 | 0.835413 | 1.702603e-56 | -8.615850e-47 |
| Msa0506400 | Msa1227690 | 0.803036 | 4.221876e-49 | -8.615850e-47 |
| Msa0506400 | Msa1231840 | 0.806233 | 9.087172e-50 | -8.615850e-47 |
| Msa0506400 | Msa1237940 | 0.826664 | 2.396097e-54 | -8.615850e-47 |
| Msa0506400 | Msa1253810 | 0.815955 | 7.090340e-52 | -8.615850e-47 |
| Msa0506400 | Msa1254730 | 0.825249 | 5.195789e-54 | -8.615850e-47 |
| Msa0506400 | Msa1256470 | 0.818989 | 1.469617e-52 | -8.615850e-47 |
| Msa0506400 | Msa1262890 | 0.828023 | 1.131580e-54 | -8.615850e-47 |
| Msa0506400 | Msa1264210 | 0.803643 | 3.160568e-49 | -8.615850e-47 |
| Msa0506400 | Msa1265590 | 0.802010 | 6.872595e-49 | -8.615850e-47 |
| Msa0506400 | Msa1265630 | 0.826443 | 2.705917e-54 | -8.615850e-47 |
| Msa0506400 | Msa1270620 | 0.830078 | 3.596327e-55 | -8.615850e-47 |
| Msa0506400 | Msa1270690 | 0.827910 | 1.204935e-54 | -8.615850e-47 |
| Msa0506400 | Msa1275110 | 0.801217 | 9.991835e-49 | -8.615850e-47 |
| Msa0506400 | Msa1276970 | 0.801894 | 7.259897e-49 | -8.615850e-47 |
| Msa0506400 | Msa1295110 | 0.815922 | 7.212861e-52 | -8.615850e-47 |
| Msa0506400 | Msa1296830 | 0.872082 | 4.178131e-67 | -8.615850e-47 |
| Msa0506400 | Msa1299700 | 0.836866 | 7.277384e-57 | -8.615850e-47 |
| Msa0506400 | Msa1302380 | 0.812177 | 4.833767e-51 | -8.615850e-47 |
| Msa0506400 | Msa1303580 | 0.815727 | 7.971630e-52 | -8.615850e-47 |
| Msa0506400 | Msa1306990 | 0.815411 | 9.374281e-52 | -8.615850e-47 |
| Msa0506400 | Msa1307180 | 0.802570 | 5.269030e-49 | -8.615850e-47 |
| Msa0506400 | Msa1316360 | 0.810761 | 9.816569e-51 | -8.615850e-47 |
| Msa0506400 | Msa1332220 | 0.838054 | 3.610424e-57 | -8.615850e-47 |
| Msa0506400 | Msa1332590 | 0.834257 | 3.327700e-56 | -8.615850e-47 |
| Msa0506400 | Msa1335250 | 0.812436 | 4.244112e-51 | -8.615850e-47 |
| Msa0506400 | Msa1336560 | 0.815815 | 7.618897e-52 | -8.615850e-47 |
| Msa0506400 | Msa1342410 | 0.808514 | 2.983538e-50 | -8.615850e-47 |
| Msa0506400 | Msa1343290 | 0.812935 | 3.301029e-51 | -8.615850e-47 |
| Msa0506400 | Msa1349570 | 0.814438 | 1.540261e-51 | -8.615850e-47 |
| Msa0506400 | Msa1351540 | 0.864327 | 1.316894e-64 | -8.615850e-47 |
| Msa0506400 | Msa1352890 | 0.807136 | 5.857605e-50 | -8.615850e-47 |
| Msa0506400 | Msa1360140 | 0.818640 | 1.763646e-52 | -8.615850e-47 |
| Msa0506400 | Msa1363330 | 0.831336 | 1.768595e-55 | -8.615850e-47 |
| Msa0506400 | Msa1368120 | 0.841003 | 6.184709e-58 | -8.615850e-47 |
| Msa0506400 | Msa1369190 | 0.810087 | 1.372235e-50 | -8.615850e-47 |
| Msa0506400 | Msa1376650 | 0.803152 | 3.995206e-49 | -8.615850e-47 |
| Msa0506400 | Msa1379760 | 0.830934 | 2.219876e-55 | -8.615850e-47 |
| Msa0506400 | Msa1381650 | 0.804191 | 2.431686e-49 | -8.615850e-47 |
| Msa0506400 | Msa1385770 | 0.802352 | 5.842978e-49 | -8.615850e-47 |
| Msa0506400 | Msa1386600 | 0.831088 | 2.035223e-55 | -8.615850e-47 |
| Msa0506400 | Msa1394290 | 0.807222 | 5.617243e-50 | -8.615850e-47 |
| Msa0506400 | Msa1404190 | 0.814547 | 1.457583e-51 | -8.615850e-47 |
| Msa0506400 | Msa1413500 | 0.807763 | 4.311885e-50 | -8.615850e-47 |
| Msa0506400 | Msa1422810 | 0.817152 | 3.824399e-52 | -8.615850e-47 |
| Msa0506400 | Msa1433600 | 0.836098 | 1.141696e-56 | -8.615850e-47 |
| Msa0506400 | Msa1444310 | 0.824476 | 7.906417e-54 | -8.615850e-47 |
| Msa0506400 | Msa1450280 | 0.825499 | 4.534436e-54 | -8.615850e-47 |
| Msa0506400 | Msa1454450 | 0.827250 | 1.735826e-54 | -8.615850e-47 |
| Msa0506400 | Msa1454680 | 0.815241 | 1.022685e-51 | -8.615850e-47 |
| Msa0506400 | Msa1457920 | 0.807204 | 5.666723e-50 | -8.615850e-47 |
| Msa0506400 | Msa1458090 | 0.802671 | 5.022813e-49 | -8.615850e-47 |
| Msa0506400 | Msa1459960 | 0.815262 | 1.011462e-51 | -8.615850e-47 |
| Msa0506400 | Msa1465260 | 0.815266 | 1.009587e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506400 | MtrunA17_Chr3g0107911 | 98.519 | 270 | 3 | 1 | 1 | 270 | 1 | 269 | 0.0 | 540 |
| Msa0506400 | MtrunA17_Chr5g0432801 | 84.307 | 274 | 38 | 3 | 1 | 269 | 1 | 274 | 2.15e-147 | 413 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506400 | AT5G20920.3 | 75.093 | 269 | 60 | 5 | 1 | 265 | 1 | 266 | 1.69e-131 | 373 |
| Msa0506400 | AT5G20920.1 | 75.093 | 269 | 60 | 5 | 1 | 265 | 1 | 266 | 1.69e-131 | 373 |
| Msa0506400 | AT5G20920.2 | 75.093 | 269 | 59 | 6 | 1 | 265 | 1 | 265 | 2.41e-130 | 370 |
| Msa0506400 | AT3G07920.1 | 70.395 | 152 | 37 | 2 | 118 | 265 | 17 | 164 | 1.15e-70 | 215 |
| Msa0506400 | AT5G01940.2 | 57.042 | 142 | 56 | 3 | 114 | 254 | 72 | 209 | 6.65e-49 | 161 |
| Msa0506400 | AT5G01940.3 | 57.042 | 142 | 56 | 3 | 114 | 254 | 104 | 241 | 1.01e-48 | 162 |
| Msa0506400 | AT5G01940.1 | 53.846 | 156 | 63 | 4 | 114 | 262 | 72 | 225 | 1.09e-46 | 156 |
Find 75 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTTCTTGCTCGCAGAAC+TGG | 0.219121 | 3_4:-52720902 | Msa0506400:CDS |
| CGCCGGTCTCCAGCAAGTTC+TGG | 0.280426 | 3_4:+52721306 | None:intergenic |
| AAAATTCCTTCGAAGTTCTT+TGG | 0.281091 | 3_4:+52720823 | None:intergenic |
| AGTCAGTTAAATAAGATAAC+TGG | 0.326850 | 3_4:-52719735 | Msa0506400:three_prime_UTR |
| AGAAGCGAAACGCACCGTTT+TGG | 0.356156 | 3_4:-52723974 | Msa0506400:five_prime_UTR |
| CCTTGCAACCTCGTTACCCT+TGG | 0.397283 | 3_4:-52721949 | Msa0506400:CDS |
| TATTTCTTGCAGTGTGGATC+AGG | 0.405314 | 3_4:-52719998 | Msa0506400:intron |
| CGTGTTGGCCGTAGGACTGC+TGG | 0.416736 | 3_4:-52719938 | Msa0506400:CDS |
| ATAATTTAAATGTGAAAACT+AGG | 0.422634 | 3_4:-52719870 | Msa0506400:three_prime_UTR |
| GAGAATAATCCAGAACTTGC+TGG | 0.427102 | 3_4:-52721315 | Msa0506400:CDS |
| TCCTTTGAAAGTATCGTGTC+AGG | 0.433098 | 3_4:+52720665 | None:intergenic |
| TAATTTAAATGTGAAAACTA+GGG | 0.436503 | 3_4:-52719869 | Msa0506400:three_prime_UTR |
| GATGAATATGTCATTTGCCT+TGG | 0.446437 | 3_4:-52720698 | Msa0506400:CDS |
| GCAACAAAACCAGCCTTGAT+AGG | 0.448200 | 3_4:+52719962 | None:intergenic |
| GTTCTTTCTCCGGTGTGAAA+AGG | 0.449900 | 3_4:-52720633 | Msa0506400:intron |
| CATGTAGGTCAAGCAAAAGT+TGG | 0.450106 | 3_4:+52719831 | None:intergenic |
| AAGAAAGCCATGACATGATC+TGG | 0.453989 | 3_4:+52720916 | None:intergenic |
| GGTACAAGTGGTTCTCTAGA+TGG | 0.461160 | 3_4:-52720880 | Msa0506400:CDS |
| ACTGTGTCTGATGATGCTAT+TGG | 0.463091 | 3_4:+52723930 | None:intergenic |
| CTTGCAACCTCGTTACCCTT+GGG | 0.463993 | 3_4:-52721948 | Msa0506400:CDS |
| GTCAAGCAAAAGTTGGGAAA+TGG | 0.465103 | 3_4:+52719838 | None:intergenic |
| TCTAGATGGACAGCAGAGAT+TGG | 0.466810 | 3_4:-52720866 | Msa0506400:CDS |
| AGAGCGGAACGAGAGAAATC+TGG | 0.470855 | 3_4:+52723886 | None:intergenic |
| GGGTTTGACAGTACATTAGC+TGG | 0.474950 | 3_4:-52722318 | Msa0506400:CDS |
| AAGATCAGTTGCACCTATCA+AGG | 0.492968 | 3_4:-52719975 | Msa0506400:CDS |
| AGAACCGTTTGTTCTTTCTC+CGG | 0.497985 | 3_4:-52720643 | Msa0506400:CDS |
| CACACCGGAGAAAGAACAAA+CGG | 0.501705 | 3_4:+52720639 | None:intergenic |
| ATCCAGAACTTGCTGGAGAC+CGG | 0.505136 | 3_4:-52721308 | Msa0506400:CDS |
| TTGTTGCTCGTGTTGGCCGT+AGG | 0.510944 | 3_4:-52719946 | Msa0506400:CDS |
| TCAGTTGCACCTATCAAGGC+TGG | 0.525265 | 3_4:-52719971 | Msa0506400:CDS |
| ATGTAGGTCAAGCAAAAGTT+GGG | 0.525415 | 3_4:+52719832 | None:intergenic |
| GCTTTCTTGCTCGCAGAACT+GGG | 0.527421 | 3_4:-52720901 | Msa0506400:CDS |
| CTCCTCAGATCACGCTGAAG+AGG | 0.531791 | 3_4:-52721990 | Msa0506400:intron |
| AGAGATTGGTTGTGAAGGGA+AGG | 0.537518 | 3_4:-52720852 | Msa0506400:CDS |
| GAGAAGACAGAAAATCTGTC+AGG | 0.538239 | 3_4:-52722473 | Msa0506400:intron |
| GTGCCCTCACGAAGCACTTG+TGG | 0.543726 | 3_4:+52721264 | None:intergenic |
| CAGCAGAGATTGGTTGTGAA+GGG | 0.544525 | 3_4:-52720856 | Msa0506400:CDS |
| TCATCAAGATCTACCACTGC+GGG | 0.548138 | 3_4:+52722518 | None:intergenic |
| TGAAGCACAGATTGATGTGA+AGG | 0.549994 | 3_4:-52722834 | Msa0506400:CDS |
| TCCTCAGATCACGCTGAAGA+GGG | 0.551051 | 3_4:-52721989 | Msa0506400:intron |
| CCTGGTCTTTCAGGATGCAT+CGG | 0.556067 | 3_4:-52720942 | Msa0506400:intron |
| CAATAAACTCAGCTGAAGTA+CGG | 0.559028 | 3_4:+52719801 | None:intergenic |
| GTTCCGCTCTCTCCTTCGAT+CGG | 0.561935 | 3_4:-52723873 | Msa0506400:five_prime_UTR |
| ACAGATTGATGTGAAGGAAG+AGG | 0.574813 | 3_4:-52722828 | Msa0506400:CDS |
| ACCGGCGTAGGACTGTTATG+AGG | 0.576935 | 3_4:-52721290 | Msa0506400:CDS |
| ATGTCCCTCCAGCAGTCCTA+CGG | 0.579897 | 3_4:+52719930 | None:intergenic |
| ACAGCAGAGATTGGTTGTGA+AGG | 0.584946 | 3_4:-52720857 | Msa0506400:CDS |
| TGCTTAGGTTTCAGTAACCA+TGG | 0.585520 | 3_4:-52722861 | Msa0506400:intron |
| CACGATCACTTCCTTCCCAA+GGG | 0.589285 | 3_4:+52721933 | None:intergenic |
| CAACCTCGTTACCCTTGGGA+AGG | 0.592495 | 3_4:-52721944 | Msa0506400:CDS |
| TTTGCACCAAAGAACTTCGA+AGG | 0.593663 | 3_4:-52720829 | Msa0506400:CDS |
| CTCGCAGAACTGGGTACAAG+TGG | 0.594988 | 3_4:-52720892 | Msa0506400:CDS |
| TCACGATCACTTCCTTCCCA+AGG | 0.596987 | 3_4:+52721932 | None:intergenic |
| AATCTGTGCTTCATCTGCCA+TGG | 0.597125 | 3_4:+52722844 | None:intergenic |
| CCAAGGGTAACGAGGTTGCA+AGG | 0.598454 | 3_4:+52721949 | None:intergenic |
| TAACCGATCGAAGGAGAGAG+CGG | 0.601074 | 3_4:+52723870 | None:intergenic |
| CCCTCACGAAGCACTTGTGG+TGG | 0.602954 | 3_4:+52721267 | None:intergenic |
| AATTTAAATGTGAAAACTAG+GGG | 0.606564 | 3_4:-52719868 | Msa0506400:three_prime_UTR |
| GCCACCACAAGTGCTTCGTG+AGG | 0.609200 | 3_4:-52721268 | Msa0506400:CDS |
| TGATGATTCAGTAGACAAGT+TGG | 0.613548 | 3_4:-52722498 | Msa0506400:CDS |
| TCCTGACACGATACTTTCAA+AGG | 0.615897 | 3_4:-52720666 | Msa0506400:CDS |
| CTTCCTTCCCAAGGGTAACG+AGG | 0.616919 | 3_4:+52721941 | None:intergenic |
| GCCTCATAACAGTCCTACGC+CGG | 0.621949 | 3_4:+52721289 | None:intergenic |
| GATCACGCTGAAGAGGGTGA+AGG | 0.625346 | 3_4:-52721983 | Msa0506400:CDS |
| GTTGGCCGTAGGACTGCTGG+AGG | 0.632202 | 3_4:-52719935 | Msa0506400:CDS |
| GTCTGATGATGCTATTGGAA+CGG | 0.632784 | 3_4:+52723935 | None:intergenic |
| CCACCACAAGTGCTTCGTGA+GGG | 0.634193 | 3_4:-52721267 | Msa0506400:CDS |
| AAGTACGGTATACAACATGT+AGG | 0.642394 | 3_4:+52719816 | None:intergenic |
| TCGGCAGCCAGATCATGTCA+TGG | 0.653346 | 3_4:-52720923 | Msa0506400:CDS |
| CATACGAATTAACCGATCGA+AGG | 0.657708 | 3_4:+52723861 | None:intergenic |
| AACTTGCTGGAGACCGGCGT+AGG | 0.658489 | 3_4:-52721302 | Msa0506400:CDS |
| TTGGCCGTAGGACTGCTGGA+GGG | 0.698921 | 3_4:-52719934 | Msa0506400:CDS |
| TGATCGTGATTATCAATACG+AGG | 0.718816 | 3_4:-52721918 | Msa0506400:CDS |
| ATCATCAAGATCTACCACTG+CGG | 0.727185 | 3_4:+52722517 | None:intergenic |
| TCGTGATTATCAATACGAGG+AGG | 0.739399 | 3_4:-52721915 | Msa0506400:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTTATATTATTTA+CGG | - | chr3_4:52720162-52720181 | Msa0506400:intron | 0.0% |
| !! | TATAAAAAAAAAAAAAAAAA+AGG | + | chr3_4:52723779-52723798 | None:intergenic | 0.0% |
| !!! | TTTTTTTTCTTAATTGTTAT+TGG | - | chr3_4:52720072-52720091 | Msa0506400:intron | 10.0% |
| !!! | TTTTTTTCTTAATTGTTATT+GGG | - | chr3_4:52720073-52720092 | Msa0506400:intron | 10.0% |
| !!! | GAAAAAAAAAATCGATTTTA+GGG | + | chr3_4:52719849-52719868 | None:intergenic | 15.0% |
| !!! | AGAAAAAAAAAATCGATTTT+AGG | + | chr3_4:52719850-52719869 | None:intergenic | 15.0% |
| !!! | TTTTTGCTAATTAATCAATT+GGG | - | chr3_4:52720016-52720035 | Msa0506400:intron | 15.0% |
| !! | TAAATCAATAATCAAAATCA+AGG | + | chr3_4:52720193-52720212 | None:intergenic | 15.0% |
| !!! | TTGATTTTGATTATTGATTT+AGG | - | chr3_4:52720192-52720211 | Msa0506400:intron | 15.0% |
| !!! | ATATTTTTATTGATGATTGT+AGG | - | chr3_4:52721510-52721529 | Msa0506400:intron | 15.0% |
| !!! | TTAACTTCTTTTAAGAATTA+AGG | + | chr3_4:52721629-52721648 | None:intergenic | 15.0% |
| !!! | ATATTTTGGAATTTTTTACA+TGG | - | chr3_4:52721998-52722017 | Msa0506400:intron | 15.0% |
| !! | CTAAAAAGAACATAATATAT+AGG | + | chr3_4:52722949-52722968 | None:intergenic | 15.0% |
| !! | ATAATTTAAATGTGAAAACT+AGG | - | chr3_4:52723796-52723815 | Msa0506400:intron | 15.0% |
| !! | TAATTTAAATGTGAAAACTA+GGG | - | chr3_4:52723797-52723816 | Msa0506400:intron | 15.0% |
| !! | TTCAACTCATTAAAAATAAA+TGG | + | chr3_4:52723962-52723981 | None:intergenic | 15.0% |
| !!! | ATTGTTCTAAATTCTGATTA+TGG | - | chr3_4:52719941-52719960 | Msa0506400:CDS | 20.0% |
| !!! | TTGTTCTAAATTCTGATTAT+GGG | - | chr3_4:52719942-52719961 | Msa0506400:CDS | 20.0% |
| !!! | GTTTTTGCTAATTAATCAAT+TGG | - | chr3_4:52720015-52720034 | Msa0506400:intron | 20.0% |
| !!! | TTAATCAATTGGGTTTTTTT+AGG | - | chr3_4:52720026-52720045 | Msa0506400:intron | 20.0% |
| !!! | TAATCAATTGGGTTTTTTTA+GGG | - | chr3_4:52720027-52720046 | Msa0506400:intron | 20.0% |
| !! | CATAGATAGTAATAAACTAA+GGG | + | chr3_4:52720502-52720521 | None:intergenic | 20.0% |
| !!! | AGTATCGTATTTTATTATCT+AGG | - | chr3_4:52720594-52720613 | Msa0506400:intron | 20.0% |
| !!! | TTTTTCTTCTTCTTTTTAGT+AGG | + | chr3_4:52721124-52721143 | None:intergenic | 20.0% |
| !!! | TATTTTATGCTATTAAGTCT+TGG | - | chr3_4:52721242-52721261 | Msa0506400:CDS | 20.0% |
| !!! | CATTGATATAAATTTTGTGT+TGG | + | chr3_4:52721606-52721625 | None:intergenic | 20.0% |
| !!! | ATTAGAGAATAATTTTACAC+CGG | + | chr3_4:52721828-52721847 | None:intergenic | 20.0% |
| !!! | TATACGTTACTTTTCATATT+TGG | - | chr3_4:52721899-52721918 | Msa0506400:intron | 20.0% |
| !!! | ATTTTTTACATGGAACTTAT+TGG | - | chr3_4:52722008-52722027 | Msa0506400:intron | 20.0% |
| !!! | AACTGTTTTTGTGAATTTTA+TGG | - | chr3_4:52722431-52722450 | Msa0506400:intron | 20.0% |
| !!! | TTTTTGATGCAATAATAGAA+AGG | + | chr3_4:52722686-52722705 | None:intergenic | 20.0% |
| !! | ATATATTAGTAAGTATCTTG+TGG | - | chr3_4:52722872-52722891 | Msa0506400:intron | 20.0% |
| !! | TACAAGAGAAACTATTAAAA+AGG | + | chr3_4:52723286-52723305 | None:intergenic | 20.0% |
| !!! | GATTTGAAATATTCAACTTT+AGG | + | chr3_4:52723389-52723408 | None:intergenic | 20.0% |
| !!! | CTTTCATAAGTAATTTTTCA+TGG | + | chr3_4:52723420-52723439 | None:intergenic | 20.0% |
| !! | AAAACGTCATTGTAAAATAT+TGG | + | chr3_4:52723526-52723545 | None:intergenic | 20.0% |
| !!! | TCTCTAAAAGAAAAAATTCA+CGG | + | chr3_4:52723549-52723568 | None:intergenic | 20.0% |
| !! | AATTTAAATGTGAAAACTAG+GGG | - | chr3_4:52723798-52723817 | Msa0506400:intron | 20.0% |
| !!! | TATTTTTAATGAGTTGAATC+AGG | - | chr3_4:52723964-52723983 | Msa0506400:five_prime_UTR | 20.0% |
| ! | CTTTATAAGCCTAAAAATCA+TGG | + | chr3_4:52719980-52719999 | None:intergenic | 25.0% |
| !!! | TTATTGATTTAGGCTTTGTA+TGG | - | chr3_4:52720202-52720221 | Msa0506400:intron | 25.0% |
| ! | CATAACATAAACACTTATCA+TGG | + | chr3_4:52720267-52720286 | None:intergenic | 25.0% |
| !! | ATTGGCTTATTTGAACTTAT+TGG | + | chr3_4:52720470-52720489 | None:intergenic | 25.0% |
| ! | GCATAGATAGTAATAAACTA+AGG | + | chr3_4:52720503-52720522 | None:intergenic | 25.0% |
| ! | TATAATATTTGTCGAAGATG+TGG | + | chr3_4:52720757-52720776 | None:intergenic | 25.0% |
| !!! | TTTCTAGTTTTGTTTTGCTT+AGG | - | chr3_4:52720790-52720809 | Msa0506400:intron | 25.0% |
| !!! | TAAGTTTGCACAATTGATTT+TGG | - | chr3_4:52720870-52720889 | Msa0506400:CDS | 25.0% |
| !!! | ATTTTGGTAGTTTTATGCAT+TGG | - | chr3_4:52720886-52720905 | Msa0506400:CDS | 25.0% |
| !!! | TTCAAATCTCTTTGATTTGT+TGG | - | chr3_4:52721027-52721046 | Msa0506400:intron | 25.0% |
| ! | AATCTGCAATTAACAAATTC+AGG | + | chr3_4:52721089-52721108 | None:intergenic | 25.0% |
| !!! | TTCTTTTTAGTAGGATCAAA+TGG | + | chr3_4:52721115-52721134 | None:intergenic | 25.0% |
| !!! | GTCTTTAATGTTATTTTCTG+AGG | - | chr3_4:52721264-52721283 | Msa0506400:CDS | 25.0% |
| !! | TAAATTTTGTGTTGGATAGT+TGG | + | chr3_4:52721598-52721617 | None:intergenic | 25.0% |
| ! | AATCAGTTGAGAAACATTTA+TGG | + | chr3_4:52721871-52721890 | None:intergenic | 25.0% |
| !!! | TCGTTTTTGTATTATTGTTG+TGG | - | chr3_4:52722126-52722145 | Msa0506400:CDS | 25.0% |
| !! | CGTTTTTGTATTATTGTTGT+GGG | - | chr3_4:52722127-52722146 | Msa0506400:CDS | 25.0% |
| ! | ATATATCATGAAGCTATTGT+TGG | + | chr3_4:52722157-52722176 | None:intergenic | 25.0% |
| !! | GGTAGTATTTGTCATAATTT+TGG | - | chr3_4:52722252-52722271 | Msa0506400:intron | 25.0% |
| !! | AATTAACTTTGAGGAAATCA+TGG | + | chr3_4:52722588-52722607 | None:intergenic | 25.0% |
| ! | TGTGGATATAATTAACTTTG+AGG | + | chr3_4:52722597-52722616 | None:intergenic | 25.0% |
| !!! | AACTTCAAATACACTTTTTG+TGG | + | chr3_4:52722615-52722634 | None:intergenic | 25.0% |
| ! | TTGGTCAATTTCTAAATTTC+AGG | + | chr3_4:52723136-52723155 | None:intergenic | 25.0% |
| !! | GTTGTTGTTGTATATATGTT+TGG | + | chr3_4:52723155-52723174 | None:intergenic | 25.0% |
| !! | TGGTTTTTCATATAACACTA+TGG | + | chr3_4:52723233-52723252 | None:intergenic | 25.0% |
| ! | TAATGAGTTCAAGAAAGAAA+TGG | + | chr3_4:52723253-52723272 | None:intergenic | 25.0% |
| !!! | AATTTGAAACATTTTCCTAC+AGG | + | chr3_4:52723355-52723374 | None:intergenic | 25.0% |
| !! | GTAATTTTTCATGGATCAAT+TGG | + | chr3_4:52723411-52723430 | None:intergenic | 25.0% |
| ! | ATATCTTGTACTTTATGATG+TGG | - | chr3_4:52723625-52723644 | Msa0506400:intron | 25.0% |
| ! | TATCTTGTACTTTATGATGT+GGG | - | chr3_4:52723626-52723645 | Msa0506400:intron | 25.0% |
| !! | AGTTTATTGCAGTACATTTT+TGG | - | chr3_4:52723879-52723898 | Msa0506400:five_prime_UTR | 25.0% |
| ! | AGTCAGTTAAATAAGATAAC+TGG | - | chr3_4:52723931-52723950 | Msa0506400:five_prime_UTR | 25.0% |
| !! | TCTAAAACCCTTTTCCAAAA+CGG | + | chr3_4:52719709-52719728 | None:intergenic | 30.0% |
| CAAATTGGGTAATCAAAAAG+GGG | + | chr3_4:52719888-52719907 | None:intergenic | 30.0% | |
| CCAAATTGGGTAATCAAAAA+GGG | + | chr3_4:52719889-52719908 | None:intergenic | 30.0% | |
| ACCAAATTGGGTAATCAAAA+AGG | + | chr3_4:52719890-52719909 | None:intergenic | 30.0% | |
| ! | TCATCAACTCCATGATTTTT+AGG | - | chr3_4:52719968-52719987 | Msa0506400:CDS | 30.0% |
| !! | AGCAAAGAATCTCTTTGTTT+TGG | - | chr3_4:52720120-52720139 | Msa0506400:intron | 30.0% |
| !!! | ATCTCTTTGTTTTGGCTATA+AGG | - | chr3_4:52720128-52720147 | Msa0506400:intron | 30.0% |
| !!! | TCTCTTTGTTTTGGCTATAA+GGG | - | chr3_4:52720129-52720148 | Msa0506400:intron | 30.0% |
| ! | CTTCATTCTTTCTATGCTTT+TGG | - | chr3_4:52720530-52720549 | Msa0506400:intron | 30.0% |
| !! | TTAGTCTTTTGTATCAAGTC+AGG | - | chr3_4:52720668-52720687 | Msa0506400:CDS | 30.0% |
| ! | GTGACTGGTTATAACTTATA+AGG | - | chr3_4:52720929-52720948 | Msa0506400:CDS | 30.0% |
| TAGTGTCTTGTATTCTTAGT+TGG | - | chr3_4:52721001-52721020 | Msa0506400:intron | 30.0% | |
| TAACAAATTCAGGCATTAGA+AGG | + | chr3_4:52721079-52721098 | None:intergenic | 30.0% | |
| AATTAGAATTGTTCAAGGAC+AGG | + | chr3_4:52721304-52721323 | None:intergenic | 30.0% | |
| AGGCTAATTAGAATTGTTCA+AGG | + | chr3_4:52721309-52721328 | None:intergenic | 30.0% | |
| TGATGCGAAAAATGAAGATT+TGG | - | chr3_4:52721564-52721583 | Msa0506400:intron | 30.0% | |
| TGAGAAACATTTATGGAACT+AGG | + | chr3_4:52721864-52721883 | None:intergenic | 30.0% | |
| !!! | CGTTACTTTTCATATTTGGA+CGG | - | chr3_4:52721903-52721922 | Msa0506400:intron | 30.0% |
| !!! | TGTCGCCATATTAGTTTTAT+AGG | - | chr3_4:52721951-52721970 | Msa0506400:CDS | 30.0% |
| CACAGCCTATAAAACTAATA+TGG | + | chr3_4:52721959-52721978 | None:intergenic | 30.0% | |
| !!! | TAGTTTTATAGGCTGTGTTT+TGG | - | chr3_4:52721962-52721981 | Msa0506400:CDS | 30.0% |
| !! | AGTTTTATAGGCTGTGTTTT+GGG | - | chr3_4:52721963-52721982 | Msa0506400:CDS | 30.0% |
| ATATAAACGCATATTTGAGG+AGG | + | chr3_4:52722051-52722070 | None:intergenic | 30.0% | |
| TCCTCAAATATGCGTTTATA+TGG | - | chr3_4:52722050-52722069 | Msa0506400:intron | 30.0% | |
| TCCATATAAACGCATATTTG+AGG | + | chr3_4:52722054-52722073 | None:intergenic | 30.0% | |
| TTATATGGATTCTGCTTTCA+AGG | - | chr3_4:52722065-52722084 | Msa0506400:intron | 30.0% | |
| TATATGGATTCTGCTTTCAA+GGG | - | chr3_4:52722066-52722085 | Msa0506400:intron | 30.0% | |
| ! | GCATTTTCTTCTGTTATCAT+AGG | - | chr3_4:52722231-52722250 | Msa0506400:intron | 30.0% |
| AAAAATATCAGAATGCAGAC+AGG | + | chr3_4:52722293-52722312 | None:intergenic | 30.0% | |
| ! | ATATTTTTCTGTGCAGCTTT+TGG | - | chr3_4:52722305-52722324 | Msa0506400:CDS | 30.0% |
| ! | TATTTTTCTGTGCAGCTTTT+GGG | - | chr3_4:52722306-52722325 | Msa0506400:CDS | 30.0% |
| ! | AATCAACATACGTTTTGCAA+AGG | + | chr3_4:52722458-52722477 | None:intergenic | 30.0% |
| ! | GAACAACATGAAAGTACATA+AGG | - | chr3_4:52722637-52722656 | Msa0506400:intron | 30.0% |
| AAAATTCCTTCGAAGTTCTT+TGG | + | chr3_4:52722846-52722865 | None:intergenic | 30.0% | |
| ATGAACTGTTATTAAGCCTT+TGG | - | chr3_4:52722912-52722931 | Msa0506400:intron | 30.0% | |
| TGAACTGTTATTAAGCCTTT+GGG | - | chr3_4:52722913-52722932 | Msa0506400:intron | 30.0% | |
| ! | ATAGGTCAATTTTTACCCAA+AGG | + | chr3_4:52722931-52722950 | None:intergenic | 30.0% |
| TCTTGAACTCATTAATCTGT+AGG | - | chr3_4:52723259-52723278 | Msa0506400:intron | 30.0% | |
| ! | TAACATCAGCCTACAATTTT+AGG | - | chr3_4:52723575-52723594 | Msa0506400:intron | 30.0% |
| ! | AACATCAGCCTACAATTTTA+GGG | - | chr3_4:52723576-52723595 | Msa0506400:intron | 30.0% |
| !! | CCCTTTTTGATTACCCAATT+TGG | - | chr3_4:52719886-52719905 | Msa0506400:three_prime_UTR | 35.0% |
| AACGAAACACACACCAAATT+GGG | + | chr3_4:52719902-52719921 | None:intergenic | 35.0% | |
| AAACGAAACACACACCAAAT+TGG | + | chr3_4:52719903-52719922 | None:intergenic | 35.0% | |
| !! | TCGCTTTTCATAAGCTATCT+TGG | - | chr3_4:52720354-52720373 | Msa0506400:intron | 35.0% |
| TCAAATAAGCCAATCCAAAC+AGG | - | chr3_4:52720476-52720495 | Msa0506400:intron | 35.0% | |
| TAATAAACTAAGGGCCTGTT+TGG | + | chr3_4:52720493-52720512 | None:intergenic | 35.0% | |
| GTGTCTTGATTTCTCTATTC+AGG | - | chr3_4:52720637-52720656 | Msa0506400:CDS | 35.0% | |
| ! | GATGTGGAATTTTGGATGAA+AGG | + | chr3_4:52720741-52720760 | None:intergenic | 35.0% |
| ! | TTGTCGAAGATGTGGAATTT+TGG | + | chr3_4:52720749-52720768 | None:intergenic | 35.0% |
| CAATTGTGCAAACTTACATC+AGG | + | chr3_4:52720866-52720885 | None:intergenic | 35.0% | |
| CAGTCACATGAAACATGTAT+AGG | + | chr3_4:52720916-52720935 | None:intergenic | 35.0% | |
| CTATACATGTTTCATGTGAC+TGG | - | chr3_4:52720914-52720933 | Msa0506400:CDS | 35.0% | |
| TGATGATTCAGTAGACAAGT+TGG | - | chr3_4:52721168-52721187 | Msa0506400:intron | 35.0% | |
| CAACAATTCAAATGACCTAC+AGG | + | chr3_4:52721396-52721415 | None:intergenic | 35.0% | |
| GTAGGTCATTTGAATTGTTG+TGG | - | chr3_4:52721396-52721415 | Msa0506400:intron | 35.0% | |
| GCGAAAAATGAAGATTTGGA+TGG | - | chr3_4:52721568-52721587 | Msa0506400:intron | 35.0% | |
| TGATCGTGATTATCAATACG+AGG | - | chr3_4:52721748-52721767 | Msa0506400:intron | 35.0% | |
| ! | ATTTTACACCGGCATTTCAA+GGG | + | chr3_4:52721817-52721836 | None:intergenic | 35.0% |
| ! | AATTTTACACCGGCATTTCA+AGG | + | chr3_4:52721818-52721837 | None:intergenic | 35.0% |
| ACATTTATGGAACTAGGTGA+GGG | + | chr3_4:52721858-52721877 | None:intergenic | 35.0% | |
| AACATTTATGGAACTAGGTG+AGG | + | chr3_4:52721859-52721878 | None:intergenic | 35.0% | |
| ! | TACTTTTCATATTTGGACGG+TGG | - | chr3_4:52721906-52721925 | Msa0506400:intron | 35.0% |
| !! | ACTTTCTCTACTTTTGCTCT+TGG | - | chr3_4:52722192-52722211 | Msa0506400:intron | 35.0% |
| GCTGTCAACTACATGTTATT+TGG | - | chr3_4:52722494-52722513 | Msa0506400:CDS | 35.0% | |
| ! | AAACCTAGATGCATTTTCGT+AGG | - | chr3_4:52722520-52722539 | Msa0506400:CDS | 35.0% |
| ! | GATGAATATGTCATTTGCCT+TGG | - | chr3_4:52722968-52722987 | Msa0506400:intron | 35.0% |
| ! | GAAATTTCACCTTTTCACAC+CGG | + | chr3_4:52723045-52723064 | None:intergenic | 35.0% |
| GAGATATACAGAGAGGAAAT+TGG | + | chr3_4:52723074-52723093 | None:intergenic | 35.0% | |
| CAGAACTCTACAATTTCAGA+AGG | + | chr3_4:52723102-52723121 | None:intergenic | 35.0% | |
| !! | CTTCTGAAATTGTAGAGTTC+TGG | - | chr3_4:52723100-52723119 | Msa0506400:intron | 35.0% |
| ! | ATTGTAGAGTTCTGGTGAAT+TGG | - | chr3_4:52723108-52723127 | Msa0506400:intron | 35.0% |
| GTTTCTCTTGTAGTCTTTCT+AGG | - | chr3_4:52723294-52723313 | Msa0506400:intron | 35.0% | |
| GCTTTAGTCCCTAAAATTGT+AGG | + | chr3_4:52723587-52723606 | None:intergenic | 35.0% | |
| ATGTAGGTCAAGCAAAAGTT+GGG | + | chr3_4:52723837-52723856 | None:intergenic | 35.0% | |
| AAGTACGGTATACAACATGT+AGG | + | chr3_4:52723853-52723872 | None:intergenic | 35.0% | |
| CAATAAACTCAGCTGAAGTA+CGG | + | chr3_4:52723868-52723887 | None:intergenic | 35.0% | |
| !!! | AAACGCACCGTTTTGGAAAA+GGG | - | chr3_4:52719699-52719718 | Msa0506400:three_prime_UTR | 40.0% |
| ! | GTCTGATGATGCTATTGGAA+CGG | + | chr3_4:52719734-52719753 | None:intergenic | 40.0% |
| ! | ACTGTGTCTGATGATGCTAT+TGG | + | chr3_4:52719739-52719758 | None:intergenic | 40.0% |
| CATACGAATTAACCGATCGA+AGG | + | chr3_4:52719808-52719827 | None:intergenic | 40.0% | |
| AAGCACTTGTCAGACTGTTT+AGG | + | chr3_4:52720444-52720463 | None:intergenic | 40.0% | |
| TGCTTAGGTTTCAGTAACCA+TGG | - | chr3_4:52720805-52720824 | Msa0506400:intron | 40.0% | |
| TGAAGCACAGATTGATGTGA+AGG | - | chr3_4:52720832-52720851 | Msa0506400:CDS | 40.0% | |
| ACAGATTGATGTGAAGGAAG+AGG | - | chr3_4:52720838-52720857 | Msa0506400:CDS | 40.0% | |
| ATCATCAAGATCTACCACTG+CGG | + | chr3_4:52721152-52721171 | None:intergenic | 40.0% | |
| GAGAAGACAGAAAATCTGTC+AGG | - | chr3_4:52721193-52721212 | Msa0506400:intron | 40.0% | |
| GACAGAAAATCTGTCAGGTA+TGG | - | chr3_4:52721198-52721217 | Msa0506400:intron | 40.0% | |
| ! | CTTTTCACTGCAGTTTCTGA+GGG | - | chr3_4:52721327-52721346 | Msa0506400:CDS | 40.0% |
| ! | TTTTCACTGCAGTTTCTGAG+GGG | - | chr3_4:52721328-52721347 | Msa0506400:CDS | 40.0% |
| AAGAAGAAGAAGAAGCCTGT+AGG | - | chr3_4:52721378-52721397 | Msa0506400:intron | 40.0% | |
| TCGTGATTATCAATACGAGG+AGG | - | chr3_4:52721751-52721770 | Msa0506400:intron | 40.0% | |
| !! | TTTATAGGCTGTGTTTTGGG+TGG | - | chr3_4:52721966-52721985 | Msa0506400:CDS | 40.0% |
| !! | TTATAGGCTGTGTTTTGGGT+GGG | - | chr3_4:52721967-52721986 | Msa0506400:CDS | 40.0% |
| ! | GGTGGGGTCTTTTCATATTT+TGG | - | chr3_4:52721984-52722003 | Msa0506400:CDS | 40.0% |
| !! | TCTCTACTTTTGCTCTTGGT+TGG | - | chr3_4:52722196-52722215 | Msa0506400:intron | 40.0% |
| GAGAATAATCCAGAACTTGC+TGG | - | chr3_4:52722351-52722370 | Msa0506400:intron | 40.0% | |
| TCACCTACGAAAATGCATCT+AGG | + | chr3_4:52722526-52722545 | None:intergenic | 40.0% | |
| !! | CTTACTTTTGTCTTCCTACC+TGG | - | chr3_4:52722706-52722725 | Msa0506400:intron | 40.0% |
| AAGAAAGCCATGACATGATC+TGG | + | chr3_4:52722753-52722772 | None:intergenic | 40.0% | |
| TTTGCACCAAAGAACTTCGA+AGG | - | chr3_4:52722837-52722856 | Msa0506400:CDS | 40.0% | |
| TCCTGACACGATACTTTCAA+AGG | - | chr3_4:52723000-52723019 | Msa0506400:intron | 40.0% | |
| !! | TCCTTTGAAAGTATCGTGTC+AGG | + | chr3_4:52723004-52723023 | None:intergenic | 40.0% |
| AGAACCGTTTGTTCTTTCTC+CGG | - | chr3_4:52723023-52723042 | Msa0506400:intron | 40.0% | |
| ATATGTTGTCAGCTCACTAG+AGG | + | chr3_4:52723330-52723349 | None:intergenic | 40.0% | |
| GCTGACAACATATATCCTGT+AGG | - | chr3_4:52723337-52723356 | Msa0506400:intron | 40.0% | |
| ! | CGTACTCATGTTACTTCTCT+GGG | + | chr3_4:52723480-52723499 | None:intergenic | 40.0% |
| ! | ACGTACTCATGTTACTTCTC+TGG | + | chr3_4:52723481-52723500 | None:intergenic | 40.0% |
| GTAGTGTATTTCTTGCAGTG+TGG | - | chr3_4:52723662-52723681 | Msa0506400:intron | 40.0% | |
| TATTTCTTGCAGTGTGGATC+AGG | - | chr3_4:52723668-52723687 | Msa0506400:intron | 40.0% | |
| AAGATCAGTTGCACCTATCA+AGG | - | chr3_4:52723691-52723710 | Msa0506400:intron | 40.0% | |
| GTCAAGCAAAAGTTGGGAAA+TGG | + | chr3_4:52723831-52723850 | None:intergenic | 40.0% | |
| CATGTAGGTCAAGCAAAAGT+TGG | + | chr3_4:52723838-52723857 | None:intergenic | 40.0% | |
| !!! | GAAACGCACCGTTTTGGAAA+AGG | - | chr3_4:52719698-52719717 | Msa0506400:three_prime_UTR | 45.0% |
| AACTAAGGGCCTGTTTGGAT+TGG | + | chr3_4:52720488-52720507 | None:intergenic | 45.0% | |
| AATCTGTGCTTCATCTGCCA+TGG | + | chr3_4:52720825-52720844 | None:intergenic | 45.0% | |
| TCATCAAGATCTACCACTGC+GGG | + | chr3_4:52721151-52721170 | None:intergenic | 45.0% | |
| CCTCAGAAACTGCAGTGAAA+AGG | + | chr3_4:52721329-52721348 | None:intergenic | 45.0% | |
| ! | CCTTTTCACTGCAGTTTCTG+AGG | - | chr3_4:52721326-52721345 | Msa0506400:CDS | 45.0% |
| GGGTTTGACAGTACATTAGC+TGG | - | chr3_4:52721348-52721367 | Msa0506400:CDS | 45.0% | |
| TATTTGGACGGTGGTTCTTG+TGG | - | chr3_4:52721915-52721934 | Msa0506400:intron | 45.0% | |
| !! | TATAGGCTGTGTTTTGGGTG+GGG | - | chr3_4:52721968-52721987 | Msa0506400:CDS | 45.0% |
| GGTACAAGTGGTTCTCTAGA+TGG | - | chr3_4:52722786-52722805 | Msa0506400:intron | 45.0% | |
| TCTAGATGGACAGCAGAGAT+TGG | - | chr3_4:52722800-52722819 | Msa0506400:intron | 45.0% | |
| ! | ACAGCAGAGATTGGTTGTGA+AGG | - | chr3_4:52722809-52722828 | Msa0506400:intron | 45.0% |
| ! | CAGCAGAGATTGGTTGTGAA+GGG | - | chr3_4:52722810-52722829 | Msa0506400:intron | 45.0% |
| ! | AGAGATTGGTTGTGAAGGGA+AGG | - | chr3_4:52722814-52722833 | Msa0506400:intron | 45.0% |
| ! | TGTCAGGACTTTTGCATCCA+AGG | + | chr3_4:52722988-52723007 | None:intergenic | 45.0% |
| CACACCGGAGAAAGAACAAA+CGG | + | chr3_4:52723030-52723049 | None:intergenic | 45.0% | |
| GTTCTTTCTCCGGTGTGAAA+AGG | - | chr3_4:52723033-52723052 | Msa0506400:intron | 45.0% | |
| GGTTGCAGAGATATACAGAG+AGG | + | chr3_4:52723081-52723100 | None:intergenic | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr3_4:52723175-52723194 | Msa0506400:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr3_4:52723176-52723195 | Msa0506400:intron | 45.0% |
| TTGTCAGCTCACTAGAGGTA+GGG | + | chr3_4:52723325-52723344 | None:intergenic | 45.0% | |
| GCAACAAAACCAGCCTTGAT+AGG | + | chr3_4:52723707-52723726 | None:intergenic | 45.0% | |
| ! | AGAAGCGAAACGCACCGTTT+TGG | - | chr3_4:52719692-52719711 | Msa0506400:three_prime_UTR | 50.0% |
| AGAGCGGAACGAGAGAAATC+TGG | + | chr3_4:52719783-52719802 | None:intergenic | 50.0% | |
| TAACCGATCGAAGGAGAGAG+CGG | + | chr3_4:52719799-52719818 | None:intergenic | 50.0% | |
| GAAGAAAAAGAAGCCCGCAG+TGG | - | chr3_4:52721135-52721154 | Msa0506400:intron | 50.0% | |
| TCCTCAGATCACGCTGAAGA+GGG | - | chr3_4:52721677-52721696 | Msa0506400:intron | 50.0% | |
| CTTGCAACCTCGTTACCCTT+GGG | - | chr3_4:52721718-52721737 | Msa0506400:intron | 50.0% | |
| CACGATCACTTCCTTCCCAA+GGG | + | chr3_4:52721736-52721755 | None:intergenic | 50.0% | |
| TCACGATCACTTCCTTCCCA+AGG | + | chr3_4:52721737-52721756 | None:intergenic | 50.0% | |
| ATGCCTCTCCCTTGAAATGC+CGG | - | chr3_4:52721806-52721825 | Msa0506400:intron | 50.0% | |
| ! | TTTCTGTGCAGCTTTTGGGC+AGG | - | chr3_4:52722310-52722329 | Msa0506400:CDS | 50.0% |
| ! | TTCTGTGCAGCTTTTGGGCA+GGG | - | chr3_4:52722311-52722330 | Msa0506400:CDS | 50.0% |
| !! | ATCCAGAACTTGCTGGAGAC+CGG | - | chr3_4:52722358-52722377 | Msa0506400:intron | 50.0% |
| ! | GTCTTCCTACCTGGTCTTTC+AGG | - | chr3_4:52722715-52722734 | Msa0506400:intron | 50.0% |
| TGCATCCTGAAAGACCAGGT+AGG | + | chr3_4:52722723-52722742 | None:intergenic | 50.0% | |
| ! | CCTGGTCTTTCAGGATGCAT+CGG | - | chr3_4:52722724-52722743 | Msa0506400:intron | 50.0% |
| GCTTTCTTGCTCGCAGAACT+GGG | - | chr3_4:52722765-52722784 | Msa0506400:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr3_4:52723177-52723196 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr3_4:52723174-52723193 | Msa0506400:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr3_4:52723180-52723199 | Msa0506400:intron | 50.0% | |
| TGTCAGCTCACTAGAGGTAG+GGG | + | chr3_4:52723324-52723343 | None:intergenic | 50.0% | |
| GTTGTCAGCTCACTAGAGGT+AGG | + | chr3_4:52723326-52723345 | None:intergenic | 50.0% | |
| TCAGTTGCACCTATCAAGGC+TGG | - | chr3_4:52723695-52723714 | Msa0506400:intron | 50.0% | |
| !!! | GCTGGTTTTGTTGCTCGTGT+TGG | - | chr3_4:52723713-52723732 | Msa0506400:intron | 50.0% |
| GTTCCGCTCTCTCCTTCGAT+CGG | - | chr3_4:52719793-52719812 | Msa0506400:three_prime_UTR | 55.0% | |
| CTCCTCAGATCACGCTGAAG+AGG | - | chr3_4:52721676-52721695 | Msa0506400:intron | 55.0% | |
| ACCCTCTTCAGCGTGATCTG+AGG | + | chr3_4:52721681-52721700 | None:intergenic | 55.0% | |
| GATCACGCTGAAGAGGGTGA+AGG | - | chr3_4:52721683-52721702 | Msa0506400:intron | 55.0% | |
| CCAAGGGTAACGAGGTTGCA+AGG | + | chr3_4:52721720-52721739 | None:intergenic | 55.0% | |
| CCTTGCAACCTCGTTACCCT+TGG | - | chr3_4:52721717-52721736 | Msa0506400:intron | 55.0% | |
| CAACCTCGTTACCCTTGGGA+AGG | - | chr3_4:52721722-52721741 | Msa0506400:intron | 55.0% | |
| CTTCCTTCCCAAGGGTAACG+AGG | + | chr3_4:52721728-52721747 | None:intergenic | 55.0% | |
| ACACCGGCATTTCAAGGGAG+AGG | + | chr3_4:52721812-52721831 | None:intergenic | 55.0% | |
| ACCGGCGTAGGACTGTTATG+AGG | - | chr3_4:52722376-52722395 | Msa0506400:intron | 55.0% | |
| GCCTCATAACAGTCCTACGC+CGG | + | chr3_4:52722380-52722399 | None:intergenic | 55.0% | |
| CCACCACAAGTGCTTCGTGA+GGG | - | chr3_4:52722399-52722418 | Msa0506400:intron | 55.0% | |
| CCGATGCATCCTGAAAGACC+AGG | + | chr3_4:52722727-52722746 | None:intergenic | 55.0% | |
| TCGGCAGCCAGATCATGTCA+TGG | - | chr3_4:52722743-52722762 | Msa0506400:intron | 55.0% | |
| GGCTTTCTTGCTCGCAGAAC+TGG | - | chr3_4:52722764-52722783 | Msa0506400:intron | 55.0% | |
| CTCGCAGAACTGGGTACAAG+TGG | - | chr3_4:52722774-52722793 | Msa0506400:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr3_4:52723182-52723201 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr3_4:52723188-52723207 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr3_4:52723189-52723208 | None:intergenic | 55.0% | |
| GTCAGCTCACTAGAGGTAGG+GGG | + | chr3_4:52723323-52723342 | None:intergenic | 55.0% | |
| ! | TTGTTGCTCGTGTTGGCCGT+AGG | - | chr3_4:52723720-52723739 | Msa0506400:intron | 55.0% |
| ATGTCCCTCCAGCAGTCCTA+CGG | + | chr3_4:52723739-52723758 | None:intergenic | 55.0% | |
| !! | AACTTGCTGGAGACCGGCGT+AGG | - | chr3_4:52722364-52722383 | Msa0506400:intron | 60.0% |
| GCCACCACAAGTGCTTCGTG+AGG | - | chr3_4:52722398-52722417 | Msa0506400:intron | 60.0% | |
| ! | CCCTCACGAAGCACTTGTGG+TGG | + | chr3_4:52722402-52722421 | None:intergenic | 60.0% |
| ! | GTGCCCTCACGAAGCACTTG+TGG | + | chr3_4:52722405-52722424 | None:intergenic | 60.0% |
| TTGGCCGTAGGACTGCTGGA+GGG | - | chr3_4:52723732-52723751 | Msa0506400:intron | 60.0% | |
| CGCCGGTCTCCAGCAAGTTC+TGG | + | chr3_4:52722363-52722382 | None:intergenic | 65.0% | |
| ! | CGTGTTGGCCGTAGGACTGC+TGG | - | chr3_4:52723728-52723747 | Msa0506400:intron | 65.0% |
| GTTGGCCGTAGGACTGCTGG+AGG | - | chr3_4:52723731-52723750 | Msa0506400:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 52719692 | 52723996 | 52719692 | ID=Msa0506400;Name=Msa0506400 |
| chr3_4 | mRNA | 52719692 | 52723996 | 52719692 | ID=Msa0506400-mRNA-1;Parent=Msa0506400;Name=Msa0506400-mRNA-1;_AED=0.02;_eAED=0.02;_QI=143|1|1|1|0.88|0.8|10|236|270 |
| chr3_4 | exon | 52719692 | 52720008 | 52719692 | ID=Msa0506400-mRNA-1:exon:11567;Parent=Msa0506400-mRNA-1 |
| chr3_4 | exon | 52720634 | 52720719 | 52720634 | ID=Msa0506400-mRNA-1:exon:11566;Parent=Msa0506400-mRNA-1 |
| chr3_4 | exon | 52720809 | 52720951 | 52720809 | ID=Msa0506400-mRNA-1:exon:11565;Parent=Msa0506400-mRNA-1 |
| chr3_4 | exon | 52721222 | 52721367 | 52721222 | ID=Msa0506400-mRNA-1:exon:11564;Parent=Msa0506400-mRNA-1 |
| chr3_4 | exon | 52721916 | 52722004 | 52721916 | ID=Msa0506400-mRNA-1:exon:11563;Parent=Msa0506400-mRNA-1 |
| chr3_4 | exon | 52722099 | 52722156 | 52722099 | ID=Msa0506400-mRNA-1:exon:11562;Parent=Msa0506400-mRNA-1 |
| chr3_4 | exon | 52722293 | 52722348 | 52722293 | ID=Msa0506400-mRNA-1:exon:11561;Parent=Msa0506400-mRNA-1 |
| chr3_4 | exon | 52722474 | 52722582 | 52722474 | ID=Msa0506400-mRNA-1:exon:11560;Parent=Msa0506400-mRNA-1 |
| chr3_4 | exon | 52722820 | 52722876 | 52722820 | ID=Msa0506400-mRNA-1:exon:11559;Parent=Msa0506400-mRNA-1 |
| chr3_4 | exon | 52723866 | 52723996 | 52723866 | ID=Msa0506400-mRNA-1:exon:11558;Parent=Msa0506400-mRNA-1 |
| chr3_4 | five_prime_UTR | 52723866 | 52723996 | 52723866 | ID=Msa0506400-mRNA-1:five_prime_utr;Parent=Msa0506400-mRNA-1 |
| chr3_4 | five_prime_UTR | 52722865 | 52722876 | 52722865 | ID=Msa0506400-mRNA-1:five_prime_utr;Parent=Msa0506400-mRNA-1 |
| chr3_4 | CDS | 52722820 | 52722864 | 52722820 | ID=Msa0506400-mRNA-1:cds;Parent=Msa0506400-mRNA-1 |
| chr3_4 | CDS | 52722474 | 52722582 | 52722474 | ID=Msa0506400-mRNA-1:cds;Parent=Msa0506400-mRNA-1 |
| chr3_4 | CDS | 52722293 | 52722348 | 52722293 | ID=Msa0506400-mRNA-1:cds;Parent=Msa0506400-mRNA-1 |
| chr3_4 | CDS | 52722099 | 52722156 | 52722099 | ID=Msa0506400-mRNA-1:cds;Parent=Msa0506400-mRNA-1 |
| chr3_4 | CDS | 52721916 | 52722004 | 52721916 | ID=Msa0506400-mRNA-1:cds;Parent=Msa0506400-mRNA-1 |
| chr3_4 | CDS | 52721222 | 52721367 | 52721222 | ID=Msa0506400-mRNA-1:cds;Parent=Msa0506400-mRNA-1 |
| chr3_4 | CDS | 52720809 | 52720951 | 52720809 | ID=Msa0506400-mRNA-1:cds;Parent=Msa0506400-mRNA-1 |
| chr3_4 | CDS | 52720634 | 52720719 | 52720634 | ID=Msa0506400-mRNA-1:cds;Parent=Msa0506400-mRNA-1 |
| chr3_4 | CDS | 52719928 | 52720008 | 52719928 | ID=Msa0506400-mRNA-1:cds;Parent=Msa0506400-mRNA-1 |
| chr3_4 | three_prime_UTR | 52719692 | 52719927 | 52719692 | ID=Msa0506400-mRNA-1:three_prime_utr;Parent=Msa0506400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
