Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0097850 | sp|Q94JX5|WLIM1_ARATH | 74.872 | 195 | 37 | 2 | 1 | 195 | 1 | 183 | 1.78e-101 | 294 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0097850 | B7FH07 | 88.889 | 207 | 11 | 2 | 1 | 207 | 1 | 195 | 1.62e-128 | 369 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0097850 | TF | LIM |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002540 | Msa0097850 | 0.807101 | 5.958067e-50 | -8.615850e-47 |
| Msa0004950 | Msa0097850 | 0.823463 | 1.366832e-53 | -8.615850e-47 |
| Msa0016670 | Msa0097850 | 0.855189 | 7.455440e-62 | -8.615850e-47 |
| Msa0027260 | Msa0097850 | 0.809072 | 2.266845e-50 | -8.615850e-47 |
| Msa0030280 | Msa0097850 | 0.835145 | 1.989226e-56 | -8.615850e-47 |
| Msa0032920 | Msa0097850 | -0.804092 | 2.549517e-49 | -8.615850e-47 |
| Msa0040690 | Msa0097850 | 0.837909 | 3.934480e-57 | -8.615850e-47 |
| Msa0042280 | Msa0097850 | 0.809308 | 2.018124e-50 | -8.615850e-47 |
| Msa0047160 | Msa0097850 | 0.810073 | 1.381677e-50 | -8.615850e-47 |
| Msa0048180 | Msa0097850 | 0.830347 | 3.090256e-55 | -8.615850e-47 |
| Msa0052610 | Msa0097850 | 0.887779 | 1.057204e-72 | -8.615850e-47 |
| Msa0052690 | Msa0097850 | 0.920327 | 1.471763e-87 | -8.615850e-47 |
| Msa0057610 | Msa0097850 | 0.808767 | 2.634130e-50 | -8.615850e-47 |
| Msa0057710 | Msa0097850 | 0.805571 | 1.251772e-49 | -8.615850e-47 |
| Msa0067870 | Msa0097850 | 0.858829 | 6.295252e-63 | -8.615850e-47 |
| Msa0073670 | Msa0097850 | 0.821170 | 4.655261e-53 | -8.615850e-47 |
| Msa0074320 | Msa0097850 | 0.800402 | 1.465958e-48 | -8.615850e-47 |
| Msa0077880 | Msa0097850 | 0.840150 | 1.033707e-57 | -8.615850e-47 |
| Msa0091570 | Msa0097850 | 0.805464 | 1.318039e-49 | -8.615850e-47 |
| Msa0092740 | Msa0097850 | -0.825348 | 4.923048e-54 | -8.615850e-47 |
| Msa0094470 | Msa0097850 | 0.802913 | 4.477342e-49 | -8.615850e-47 |
| Msa0094580 | Msa0097850 | 0.807457 | 5.007541e-50 | -8.615850e-47 |
| Msa0097810 | Msa0097850 | 0.805773 | 1.135332e-49 | -8.615850e-47 |
| Msa0097850 | Msa0103240 | 0.803175 | 3.951307e-49 | -8.615850e-47 |
| Msa0097850 | Msa0124340 | 0.804909 | 1.722173e-49 | -8.615850e-47 |
| Msa0097850 | Msa0125770 | 0.808646 | 2.795912e-50 | -8.615850e-47 |
| Msa0097850 | Msa0128860 | 0.811518 | 6.727901e-51 | -8.615850e-47 |
| Msa0097850 | Msa0137610 | -0.839045 | 2.004114e-57 | -8.615850e-47 |
| Msa0097850 | Msa0166460 | 0.810112 | 1.355428e-50 | -8.615850e-47 |
| Msa0097850 | Msa0167480 | 0.827632 | 1.405365e-54 | -8.615850e-47 |
| Msa0097850 | Msa0168800 | 0.801789 | 7.630264e-49 | -8.615850e-47 |
| Msa0097850 | Msa0170410 | 0.820364 | 7.131168e-53 | -8.615850e-47 |
| Msa0097850 | Msa0172350 | 0.800683 | 1.284790e-48 | -8.615850e-47 |
| Msa0097850 | Msa0174730 | 0.809571 | 1.771402e-50 | -8.615850e-47 |
| Msa0097850 | Msa0180020 | 0.811385 | 7.189482e-51 | -8.615850e-47 |
| Msa0097850 | Msa0186890 | 0.808608 | 2.849387e-50 | -8.615850e-47 |
| Msa0097850 | Msa0187690 | 0.805448 | 1.328519e-49 | -8.615850e-47 |
| Msa0097850 | Msa0187930 | 0.820222 | 7.689367e-53 | -8.615850e-47 |
| Msa0097850 | Msa0188890 | 0.853350 | 2.532204e-61 | -8.615850e-47 |
| Msa0097850 | Msa0194540 | 0.823614 | 1.260033e-53 | -8.615850e-47 |
| Msa0097850 | Msa0222920 | 0.812194 | 4.792250e-51 | -8.615850e-47 |
| Msa0097850 | Msa0226460 | 0.832394 | 9.693829e-56 | -8.615850e-47 |
| Msa0097850 | Msa0226470 | 0.816305 | 5.921561e-52 | -8.615850e-47 |
| Msa0097850 | Msa0227400 | 0.805694 | 1.179813e-49 | -8.615850e-47 |
| Msa0097850 | Msa0231100 | 0.829365 | 5.361823e-55 | -8.615850e-47 |
| Msa0097850 | Msa0231380 | 0.856122 | 3.983059e-62 | -8.615850e-47 |
| Msa0097850 | Msa0241800 | 0.807412 | 5.119346e-50 | -8.615850e-47 |
| Msa0097850 | Msa0244780 | 0.816584 | 5.128963e-52 | -8.615850e-47 |
| Msa0097850 | Msa0254940 | 0.800242 | 1.579982e-48 | -8.615850e-47 |
| Msa0097850 | Msa0259160 | 0.802585 | 5.231109e-49 | -8.615850e-47 |
| Msa0097850 | Msa0262310 | 0.806091 | 9.732178e-50 | -8.615850e-47 |
| Msa0097850 | Msa0262480 | 0.800988 | 1.113275e-48 | -8.615850e-47 |
| Msa0097850 | Msa0268130 | 0.818585 | 1.815269e-52 | -8.615850e-47 |
| Msa0097850 | Msa0270660 | 0.853775 | 1.911504e-61 | -8.615850e-47 |
| Msa0097850 | Msa0277450 | 0.825647 | 4.181608e-54 | -8.615850e-47 |
| Msa0097850 | Msa0296250 | 0.802045 | 6.759053e-49 | -8.615850e-47 |
| Msa0097850 | Msa0298990 | 0.816165 | 6.364098e-52 | -8.615850e-47 |
| Msa0097850 | Msa0300350 | 0.800656 | 1.301235e-48 | -8.615850e-47 |
| Msa0097850 | Msa0300690 | 0.801371 | 9.291838e-49 | -8.615850e-47 |
| Msa0097850 | Msa0302380 | 0.817343 | 3.463245e-52 | -8.615850e-47 |
| Msa0097850 | Msa0304590 | 0.826871 | 2.138738e-54 | -8.615850e-47 |
| Msa0097850 | Msa0304660 | 0.828657 | 7.957902e-55 | -8.615850e-47 |
| Msa0097850 | Msa0306710 | 0.805486 | 1.304062e-49 | -8.615850e-47 |
| Msa0097850 | Msa0311370 | 0.808629 | 2.819079e-50 | -8.615850e-47 |
| Msa0097850 | Msa0331700 | 0.832152 | 1.112483e-55 | -8.615850e-47 |
| Msa0097850 | Msa0337650 | 0.831875 | 1.302660e-55 | -8.615850e-47 |
| Msa0097850 | Msa0339640 | 0.809481 | 1.852373e-50 | -8.615850e-47 |
| Msa0097850 | Msa0357990 | 0.805898 | 1.068803e-49 | -8.615850e-47 |
| Msa0097850 | Msa0360990 | 0.820682 | 6.028642e-53 | -8.615850e-47 |
| Msa0097850 | Msa0367470 | 0.812871 | 3.408655e-51 | -8.615850e-47 |
| Msa0097850 | Msa0369050 | 0.816059 | 6.721848e-52 | -8.615850e-47 |
| Msa0097850 | Msa0369220 | 0.822709 | 2.048373e-53 | -8.615850e-47 |
| Msa0097850 | Msa0370160 | -0.805712 | 1.169137e-49 | -8.615850e-47 |
| Msa0097850 | Msa0376040 | 0.821803 | 3.325337e-53 | -8.615850e-47 |
| Msa0097850 | Msa0392940 | 0.802533 | 5.363025e-49 | -8.615850e-47 |
| Msa0097850 | Msa0416400 | 0.820109 | 8.158249e-53 | -8.615850e-47 |
| Msa0097850 | Msa0423750 | 0.811147 | 8.096651e-51 | -8.615850e-47 |
| Msa0097850 | Msa0437510 | 0.817890 | 2.608030e-52 | -8.615850e-47 |
| Msa0097850 | Msa0437690 | -0.805340 | 1.399792e-49 | -8.615850e-47 |
| Msa0097850 | Msa0441130 | 0.802525 | 5.382298e-49 | -8.615850e-47 |
| Msa0097850 | Msa0443390 | 0.823310 | 1.483677e-53 | -8.615850e-47 |
| Msa0097850 | Msa0453230 | 0.808341 | 3.248413e-50 | -8.615850e-47 |
| Msa0097850 | Msa0506400 | 0.814053 | 1.873761e-51 | -8.615850e-47 |
| Msa0097850 | Msa0508590 | 0.850588 | 1.541402e-60 | -8.615850e-47 |
| Msa0097850 | Msa0508630 | 0.838828 | 2.280309e-57 | -8.615850e-47 |
| Msa0097850 | Msa0508870 | 0.827929 | 1.192198e-54 | -8.615850e-47 |
| Msa0097850 | Msa0509950 | -0.801665 | 8.088512e-49 | -8.615850e-47 |
| Msa0097850 | Msa0516040 | 0.822394 | 2.425246e-53 | -8.615850e-47 |
| Msa0097850 | Msa0525340 | 0.815005 | 1.153873e-51 | -8.615850e-47 |
| Msa0097850 | Msa0526540 | 0.852375 | 4.809685e-61 | -8.615850e-47 |
| Msa0097850 | Msa0527020 | 0.804000 | 2.664595e-49 | -8.615850e-47 |
| Msa0097850 | Msa0527150 | 0.821641 | 3.624025e-53 | -8.615850e-47 |
| Msa0097850 | Msa0541860 | 0.808643 | 2.799553e-50 | -8.615850e-47 |
| Msa0097850 | Msa0542160 | 0.802508 | 5.425871e-49 | -8.615850e-47 |
| Msa0097850 | Msa0555910 | 0.801088 | 1.061788e-48 | -8.615850e-47 |
| Msa0097850 | Msa0556010 | 0.802302 | 5.984462e-49 | -8.615850e-47 |
| Msa0097850 | Msa0561430 | 0.813369 | 2.650397e-51 | -8.615850e-47 |
| Msa0097850 | Msa0571920 | 0.812806 | 3.522808e-51 | -8.615850e-47 |
| Msa0097850 | Msa0576940 | 0.856715 | 2.667419e-62 | -8.615850e-47 |
| Msa0097850 | Msa0577550 | 0.808987 | 2.364337e-50 | -8.615850e-47 |
| Msa0097850 | Msa0615440 | 0.836204 | 1.073193e-56 | -8.615850e-47 |
| Msa0097850 | Msa0615580 | 0.800253 | 1.571581e-48 | -8.615850e-47 |
| Msa0097850 | Msa0616240 | 0.843072 | 1.753850e-58 | -8.615850e-47 |
| Msa0097850 | Msa0619470 | 0.806626 | 7.509564e-50 | -8.615850e-47 |
| Msa0097850 | Msa0619510 | 0.808283 | 3.341218e-50 | -8.615850e-47 |
| Msa0097850 | Msa0620990 | 0.835327 | 1.789973e-56 | -8.615850e-47 |
| Msa0097850 | Msa0633760 | 0.810277 | 1.248416e-50 | -8.615850e-47 |
| Msa0097850 | Msa0641140 | 0.800352 | 1.500734e-48 | -8.615850e-47 |
| Msa0097850 | Msa0654870 | 0.821944 | 3.083212e-53 | -8.615850e-47 |
| Msa0097850 | Msa0666230 | 0.819848 | 9.362344e-53 | -8.615850e-47 |
| Msa0097850 | Msa0669520 | 0.805807 | 1.116927e-49 | -8.615850e-47 |
| Msa0097850 | Msa0677290 | 0.815337 | 9.734253e-52 | -8.615850e-47 |
| Msa0097850 | Msa0679700 | 0.810823 | 9.514748e-51 | -8.615850e-47 |
| Msa0097850 | Msa0687630 | 0.803989 | 2.678286e-49 | -8.615850e-47 |
| Msa0097850 | Msa0698490 | 0.835536 | 1.584523e-56 | -8.615850e-47 |
| Msa0097850 | Msa0698660 | 0.838982 | 2.080802e-57 | -8.615850e-47 |
| Msa0097850 | Msa0699570 | 0.845093 | 5.035893e-59 | -8.615850e-47 |
| Msa0097850 | Msa0701280 | 0.803172 | 3.958312e-49 | -8.615850e-47 |
| Msa0097850 | Msa0703230 | 0.807211 | 5.648028e-50 | -8.615850e-47 |
| Msa0097850 | Msa0711490 | 0.805146 | 1.536558e-49 | -8.615850e-47 |
| Msa0097850 | Msa0747700 | 0.801089 | 1.061377e-48 | -8.615850e-47 |
| Msa0097850 | Msa0790610 | 0.851971 | 6.269861e-61 | -8.615850e-47 |
| Msa0097850 | Msa0800270 | 0.827196 | 1.787587e-54 | -8.615850e-47 |
| Msa0097850 | Msa0818770 | 0.806400 | 8.378688e-50 | -8.615850e-47 |
| Msa0097850 | Msa0838260 | 0.833284 | 5.824638e-56 | -8.615850e-47 |
| Msa0097850 | Msa0850960 | 0.821837 | 3.264178e-53 | -8.615850e-47 |
| Msa0097850 | Msa0906780 | 0.802896 | 4.513891e-49 | -8.615850e-47 |
| Msa0097850 | Msa0947530 | -0.812261 | 4.634183e-51 | -8.615850e-47 |
| Msa0097850 | Msa0949590 | 0.809129 | 2.203763e-50 | -8.615850e-47 |
| Msa0097850 | Msa1000930 | 0.808117 | 3.625196e-50 | -8.615850e-47 |
| Msa0097850 | Msa1006840 | 0.815222 | 1.032564e-51 | -8.615850e-47 |
| Msa0097850 | Msa1019240 | 0.833189 | 6.152786e-56 | -8.615850e-47 |
| Msa0097850 | Msa1019260 | 0.824902 | 6.276762e-54 | -8.615850e-47 |
| Msa0097850 | Msa1022970 | 0.804500 | 2.097271e-49 | -8.615850e-47 |
| Msa0097850 | Msa1030930 | 0.801841 | 7.444631e-49 | -8.615850e-47 |
| Msa0097850 | Msa1033660 | 0.814078 | 1.850580e-51 | -8.615850e-47 |
| Msa0097850 | Msa1054240 | 0.808147 | 3.573209e-50 | -8.615850e-47 |
| Msa0097850 | Msa1073490 | 0.855853 | 4.772507e-62 | -8.615850e-47 |
| Msa0097850 | Msa1079230 | 0.850130 | 2.071976e-60 | -8.615850e-47 |
| Msa0097850 | Msa1094420 | 0.828133 | 1.064665e-54 | -8.615850e-47 |
| Msa0097850 | Msa1104140 | 0.834951 | 2.227112e-56 | -8.615850e-47 |
| Msa0097850 | Msa1104210 | 0.836042 | 1.179711e-56 | -8.615850e-47 |
| Msa0097850 | Msa1117550 | 0.806525 | 7.886539e-50 | -8.615850e-47 |
| Msa0097850 | Msa1124110 | 0.826858 | 2.153576e-54 | -8.615850e-47 |
| Msa0097850 | Msa1131560 | 0.827835 | 1.256223e-54 | -8.615850e-47 |
| Msa0097850 | Msa1135890 | 0.817461 | 3.257991e-52 | -8.615850e-47 |
| Msa0097850 | Msa1143650 | 0.827607 | 1.425073e-54 | -8.615850e-47 |
| Msa0097850 | Msa1150500 | 0.809890 | 1.513290e-50 | -8.615850e-47 |
| Msa0097850 | Msa1166010 | 0.802529 | 5.372653e-49 | -8.615850e-47 |
| Msa0097850 | Msa1166870 | 0.828472 | 8.822180e-55 | -8.615850e-47 |
| Msa0097850 | Msa1168950 | 0.837257 | 5.782970e-57 | -8.615850e-47 |
| Msa0097850 | Msa1169040 | 0.840975 | 6.288677e-58 | -8.615850e-47 |
| Msa0097850 | Msa1173060 | 0.874735 | 5.354779e-68 | -8.615850e-47 |
| Msa0097850 | Msa1181850 | 0.808510 | 2.989892e-50 | -8.615850e-47 |
| Msa0097850 | Msa1181860 | 0.808580 | 2.888003e-50 | -8.615850e-47 |
| Msa0097850 | Msa1198530 | 0.811521 | 6.717844e-51 | -8.615850e-47 |
| Msa0097850 | Msa1201650 | 0.806964 | 6.369167e-50 | -8.615850e-47 |
| Msa0097850 | Msa1208890 | -0.808705 | 2.716203e-50 | -8.615850e-47 |
| Msa0097850 | Msa1223330 | 0.816017 | 6.867037e-52 | -8.615850e-47 |
| Msa0097850 | Msa1227690 | 0.800971 | 1.122217e-48 | -8.615850e-47 |
| Msa0097850 | Msa1230580 | 0.807232 | 5.590384e-50 | -8.615850e-47 |
| Msa0097850 | Msa1259070 | -0.803770 | 2.974326e-49 | -8.615850e-47 |
| Msa0097850 | Msa1262890 | 0.815042 | 1.132172e-51 | -8.615850e-47 |
| Msa0097850 | Msa1265630 | 0.807157 | 5.796760e-50 | -8.615850e-47 |
| Msa0097850 | Msa1271580 | 0.801774 | 7.682681e-49 | -8.615850e-47 |
| Msa0097850 | Msa1274280 | 0.830919 | 2.239468e-55 | -8.615850e-47 |
| Msa0097850 | Msa1277490 | 0.811082 | 8.362002e-51 | -8.615850e-47 |
| Msa0097850 | Msa1306880 | 0.805924 | 1.055452e-49 | -8.615850e-47 |
| Msa0097850 | Msa1307600 | 0.802939 | 4.421298e-49 | -8.615850e-47 |
| Msa0097850 | Msa1360180 | 0.808929 | 2.432314e-50 | -8.615850e-47 |
| Msa0097850 | Msa1360980 | 0.800656 | 1.301235e-48 | -8.615850e-47 |
| Msa0097850 | Msa1363330 | 0.850499 | 1.631877e-60 | -8.615850e-47 |
| Msa0097850 | Msa1374120 | 0.814602 | 1.417360e-51 | -8.615850e-47 |
| Msa0097850 | Msa1379760 | 0.817896 | 2.598983e-52 | -8.615850e-47 |
| Msa0097850 | Msa1386600 | 0.850193 | 1.989445e-60 | -8.615850e-47 |
| Msa0097850 | Msa1386710 | 0.824517 | 7.731359e-54 | -8.615850e-47 |
| Msa0097850 | Msa1394290 | 0.802342 | 5.871647e-49 | -8.615850e-47 |
| Msa0097850 | Msa1400610 | -0.811049 | 8.500842e-51 | -8.615850e-47 |
| Msa0097850 | Msa1404190 | 0.800671 | 1.291649e-48 | -8.615850e-47 |
| Msa0097850 | Msa1406040 | 0.825227 | 5.257418e-54 | -8.615850e-47 |
| Msa0097850 | Msa1423350 | 0.805989 | 1.022459e-49 | -8.615850e-47 |
| Msa0097850 | Msa1440260 | -0.811832 | 5.748973e-51 | -8.615850e-47 |
| Msa0097850 | Msa1442850 | 0.803314 | 3.698360e-49 | -8.615850e-47 |
| Msa0097850 | Msa1444310 | 0.811133 | 8.153452e-51 | -8.615850e-47 |
| Msa0097850 | Msa1447110 | 0.801057 | 1.077411e-48 | -8.615850e-47 |
| Msa0097850 | Msa1448690 | 0.809610 | 1.737903e-50 | -8.615850e-47 |
| Msa0097850 | Msa1449910 | 0.808184 | 3.509220e-50 | -8.615850e-47 |
| Msa0097850 | Msa1457400 | 0.809039 | 2.303743e-50 | -8.615850e-47 |
| Msa0097850 | Msa1461490 | 0.840615 | 7.815948e-58 | -8.615850e-47 |
| Msa0097850 | Msa1465680 | 0.851663 | 7.664618e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0097850 | MtrunA17_Chr1g0152431 | 88.889 | 207 | 11 | 2 | 1 | 207 | 1 | 195 | 3.11e-132 | 369 |
| Msa0097850 | MtrunA17_Chr4g0059371 | 58.824 | 187 | 64 | 3 | 2 | 188 | 3 | 176 | 2.05e-75 | 225 |
| Msa0097850 | MtrunA17_Chr3g0113051 | 51.323 | 189 | 76 | 4 | 1 | 187 | 1 | 175 | 6.96e-58 | 181 |
| Msa0097850 | MtrunA17_Chr8g0349391 | 45.128 | 195 | 88 | 5 | 1 | 194 | 1 | 177 | 5.85e-50 | 161 |
| Msa0097850 | MtrunA17_Chr7g0247111 | 44.385 | 187 | 88 | 4 | 1 | 187 | 1 | 171 | 1.18e-48 | 158 |
| Msa0097850 | MtrunA17_Chr8g0386501 | 46.561 | 189 | 77 | 6 | 1 | 187 | 1 | 167 | 9.22e-48 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0097850 | AT1G10200.1 | 74.872 | 195 | 37 | 2 | 1 | 195 | 1 | 183 | 1.81e-102 | 294 |
| Msa0097850 | AT1G10200.2 | 80.800 | 125 | 24 | 0 | 71 | 195 | 17 | 141 | 2.60e-71 | 213 |
| Msa0097850 | AT2G39900.1 | 50.794 | 189 | 76 | 4 | 1 | 187 | 1 | 174 | 5.78e-57 | 179 |
| Msa0097850 | AT3G55770.3 | 48.168 | 191 | 77 | 4 | 1 | 187 | 1 | 173 | 7.51e-55 | 174 |
| Msa0097850 | AT3G55770.3 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 8.73e-16 | 72.8 |
| Msa0097850 | AT3G55770.5 | 48.168 | 191 | 77 | 4 | 1 | 187 | 1 | 173 | 7.51e-55 | 174 |
| Msa0097850 | AT3G55770.5 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 8.73e-16 | 72.8 |
| Msa0097850 | AT3G55770.2 | 48.168 | 191 | 77 | 4 | 1 | 187 | 1 | 173 | 7.51e-55 | 174 |
| Msa0097850 | AT3G55770.2 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 8.73e-16 | 72.8 |
| Msa0097850 | AT3G55770.1 | 48.168 | 191 | 77 | 4 | 1 | 187 | 1 | 173 | 7.51e-55 | 174 |
| Msa0097850 | AT3G55770.1 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 8.73e-16 | 72.8 |
| Msa0097850 | AT2G45800.1 | 43.939 | 198 | 92 | 4 | 1 | 195 | 1 | 182 | 4.88e-49 | 159 |
| Msa0097850 | AT1G01780.1 | 41.624 | 197 | 95 | 5 | 1 | 195 | 1 | 179 | 7.30e-48 | 156 |
| Msa0097850 | AT3G61230.1 | 42.157 | 204 | 99 | 5 | 2 | 202 | 3 | 190 | 8.28e-48 | 156 |
| Msa0097850 | AT3G55770.7 | 40.889 | 225 | 77 | 5 | 1 | 187 | 1 | 207 | 2.62e-47 | 155 |
| Msa0097850 | AT3G55770.7 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 1.95e-15 | 72.8 |
| Msa0097850 | AT2G45800.2 | 44.531 | 128 | 64 | 2 | 71 | 195 | 28 | 151 | 3.35e-30 | 110 |
| Msa0097850 | AT3G55770.4 | 40.288 | 139 | 61 | 4 | 1 | 135 | 1 | 121 | 7.87e-28 | 102 |
| Msa0097850 | AT3G55770.4 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 6.41e-17 | 74.3 |
| Msa0097850 | AT3G55770.6 | 39.437 | 142 | 64 | 4 | 1 | 138 | 1 | 124 | 6.50e-26 | 97.8 |
| Msa0097850 | AT3G55770.6 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 9.76e-17 | 73.9 |
Find 64 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTATCTATATTTCTTTC+TGG | 0.117591 | 1_3:+3657671 | None:intergenic |
| TTCTTTCATCATTTGGCTTA+TGG | 0.156505 | 1_3:-3657977 | Msa0097850:CDS |
| CTGGACTCTGATGCATCTTT+TGG | 0.240018 | 1_3:-3656748 | Msa0097850:three_prime_UTR |
| TCCCTCATGGGCTATGTAAT+TGG | 0.293058 | 1_3:+3657111 | None:intergenic |
| AATGAACTTCTTTCATCATT+TGG | 0.298410 | 1_3:-3657984 | Msa0097850:CDS |
| AGCATTTGAAACAACTCTTA+TGG | 0.319973 | 1_3:+3657161 | None:intergenic |
| ATTGAGCTGAAAATAATTGA+TGG | 0.336079 | 1_3:+3656681 | None:intergenic |
| TTTATAAAGGTTACAGTGAA+TGG | 0.352930 | 1_3:-3657193 | Msa0097850:intron |
| TTTGCTTGATCAGTTGAATA+TGG | 0.353364 | 1_3:+3657068 | None:intergenic |
| CTCCATACCGGAGTTACATT+TGG | 0.371704 | 1_3:+3656795 | None:intergenic |
| GTTCATTAACATGAAAATTA+CGG | 0.392058 | 1_3:+3658000 | None:intergenic |
| ACAAATATTGAATACCATAA+TGG | 0.395661 | 1_3:+3656908 | None:intergenic |
| AGGAAAAGAATGGCATTTGC+AGG | 0.400538 | 1_3:-3658433 | Msa0097850:exon |
| CTTGAGGCTTTAGCTGCTGC+AGG | 0.425078 | 1_3:+3657553 | None:intergenic |
| GGAGAGAAATAAAACTAAAG+TGG | 0.425906 | 1_3:+3658512 | None:intergenic |
| TATTCAACTGATCAAGCAAA+AGG | 0.432443 | 1_3:-3657065 | Msa0097850:CDS |
| GCTAAAGCCTCAAGTATGTT+TGG | 0.441559 | 1_3:-3657544 | Msa0097850:CDS |
| GACCAACTGTTCAAAAGAAC+TGG | 0.444337 | 1_3:-3657833 | Msa0097850:CDS |
| ACACTAATTACCTTCTCTGT+TGG | 0.465114 | 1_3:+3657478 | None:intergenic |
| GTTGGTGAGGTAAGAAGATA+AGG | 0.471222 | 1_3:-3658453 | Msa0097850:five_prime_UTR |
| CCGGTATGGAGTTCGTTACA+TGG | 0.471286 | 1_3:-3656783 | Msa0097850:three_prime_UTR |
| GGAAATTTGAGCCAGCTTGA+AGG | 0.475377 | 1_3:-3657043 | Msa0097850:CDS |
| GGAACAAGGGACAAATGTTC+TGG | 0.477611 | 1_3:-3657520 | Msa0097850:CDS |
| ACTTGTAGTTGTGGGTGAAC+AGG | 0.478525 | 1_3:-3656648 | Msa0097850:three_prime_UTR |
| TCTCATGGTCACCTTCAAGC+TGG | 0.480325 | 1_3:+3657032 | None:intergenic |
| AAGCGTATTAATAGAGTTCG+TGG | 0.482813 | 1_3:-3656720 | Msa0097850:three_prime_UTR |
| TAAGAAGATAAGGAAAAGAA+TGG | 0.489789 | 1_3:-3658443 | Msa0097850:exon |
| CAAGTATGTTTGGTGGAACA+AGG | 0.495604 | 1_3:-3657534 | Msa0097850:CDS |
| GGCACTGGTAAATGTAAGAA+AGG | 0.497607 | 1_3:+3656585 | None:intergenic |
| TTGAAACAACTCTTATGGTA+AGG | 0.498185 | 1_3:+3657166 | None:intergenic |
| AACAGGTTGAAAATTAGAAT+AGG | 0.503037 | 1_3:-3656631 | Msa0097850:three_prime_UTR |
| AACATAGCAACTTGTAGTTG+TGG | 0.510923 | 1_3:-3656657 | Msa0097850:three_prime_UTR |
| GAGAAATAAAACTAAAGTGG+AGG | 0.517391 | 1_3:+3658515 | None:intergenic |
| AGAAAGAAATATAGATAATG+AGG | 0.518674 | 1_3:-3657669 | Msa0097850:intron |
| CCTTGAGGGTTCCTTTGCAG+TGG | 0.520760 | 1_3:+3658311 | None:intergenic |
| TTTCATCATTTGGCTTATGG+AGG | 0.523794 | 1_3:-3657974 | Msa0097850:intron |
| GAGAGAGACATAGACCTTGA+GGG | 0.525903 | 1_3:+3658297 | None:intergenic |
| TTCATAGACTTGTTGCAAGT+TGG | 0.534172 | 1_3:-3658471 | Msa0097850:five_prime_UTR |
| ACATAGCAACTTGTAGTTGT+GGG | 0.534197 | 1_3:-3656656 | Msa0097850:three_prime_UTR |
| GACTAATAGTACACCCTCCA+TGG | 0.536605 | 1_3:+3657137 | None:intergenic |
| AACCAAATGTAACTCCGGTA+TGG | 0.537455 | 1_3:-3656797 | Msa0097850:three_prime_UTR |
| AGGAACAACTCAGAAGTGTA+TGG | 0.560932 | 1_3:-3658413 | Msa0097850:CDS |
| ATTCAACTGATCAAGCAAAA+GGG | 0.562604 | 1_3:-3657064 | Msa0097850:CDS |
| AGTTGTTTCAAATGCTGCCA+TGG | 0.564010 | 1_3:-3657154 | Msa0097850:CDS |
| GACATCTGAAACAAGCTTTG+TGG | 0.565667 | 1_3:+3658335 | None:intergenic |
| AATATTTGTTTGCAAGTGTG+CGG | 0.578719 | 1_3:-3656894 | Msa0097850:three_prime_UTR |
| TTGAACAGTTGGTCGAAGTG+TGG | 0.580292 | 1_3:+3657842 | None:intergenic |
| AGACTTGTTGCAAGTTGGTG+AGG | 0.582330 | 1_3:-3658466 | Msa0097850:five_prime_UTR |
| TTCAGATGTCACCACTGCAA+AGG | 0.582786 | 1_3:-3658322 | Msa0097850:CDS |
| GCTTGATCAGTTGAATATGG+TGG | 0.582930 | 1_3:+3657071 | None:intergenic |
| CCATGTAACGAACTCCATAC+CGG | 0.586749 | 1_3:+3656783 | None:intergenic |
| AAAGCCTCAAGTATGTTTGG+TGG | 0.587944 | 1_3:-3657541 | Msa0097850:CDS |
| ACGGAAACCAAATGTAACTC+CGG | 0.588072 | 1_3:-3656802 | Msa0097850:three_prime_UTR |
| TCCAATTACATAGCCCATGA+GGG | 0.590710 | 1_3:-3657112 | Msa0097850:CDS |
| GTTTCAAATGCTGCCATGGA+GGG | 0.597804 | 1_3:-3657150 | Msa0097850:CDS |
| ACTAAAGTGGAGGAGAAATG+TGG | 0.601249 | 1_3:+3658525 | None:intergenic |
| TGTTCCACCAAACATACTTG+AGG | 0.606764 | 1_3:+3657537 | None:intergenic |
| AACAGTGTATCCAACAGAGA+AGG | 0.613878 | 1_3:-3657488 | Msa0097850:intron |
| TTCCAATTACATAGCCCATG+AGG | 0.614856 | 1_3:-3657113 | Msa0097850:CDS |
| TCATGGGCTATGTAATTGGA+AGG | 0.623562 | 1_3:+3657115 | None:intergenic |
| AAGTATGTTTGGTGGAACAA+GGG | 0.641097 | 1_3:-3657533 | Msa0097850:CDS |
| CCACTGCAAAGGAACCCTCA+AGG | 0.664342 | 1_3:-3658311 | Msa0097850:intron |
| TGTTTCAAATGCTGCCATGG+AGG | 0.668776 | 1_3:-3657151 | Msa0097850:CDS |
| CATTAACATGAAAATTACGG+TGG | 0.679221 | 1_3:+3658003 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTCAAAAATAATTTTGTT+CGG | + | chr1_3:3657767-3657786 | None:intergenic | 15.0% |
| !!! | TCAATAATTTGCATTTATAA+AGG | - | chr1_3:3657889-3657908 | Msa0097850:intron | 15.0% |
| !!! | GTGTTTTATTTTGATTTTAA+CGG | - | chr1_3:3658274-3658293 | Msa0097850:intron | 15.0% |
| !!! | AACTCAAAAATAATTTTGTT+CGG | + | chr1_3:3657767-3657786 | None:intergenic | 15.0% |
| !!! | TCAATAATTTGCATTTATAA+AGG | - | chr1_3:3657889-3657908 | Msa0097850:intron | 15.0% |
| !!! | GTGTTTTATTTTGATTTTAA+CGG | - | chr1_3:3658274-3658293 | Msa0097850:intron | 15.0% |
| !! | TTGTAGCTTCAATAAAATTA+CGG | + | chr1_3:3656962-3656981 | None:intergenic | 20.0% |
| !! | GTTCATTAACATGAAAATTA+CGG | + | chr1_3:3657098-3657117 | None:intergenic | 20.0% |
| !! | TCATTATCTATATTTCTTTC+TGG | + | chr1_3:3657427-3657446 | None:intergenic | 20.0% |
| !! | AGAAAGAAATATAGATAATG+AGG | - | chr1_3:3657426-3657445 | Msa0097850:intron | 20.0% |
| !! | ACAAATATTGAATACCATAA+TGG | + | chr1_3:3658190-3658209 | None:intergenic | 20.0% |
| !! | TTGTAGCTTCAATAAAATTA+CGG | + | chr1_3:3656962-3656981 | None:intergenic | 20.0% |
| !! | GTTCATTAACATGAAAATTA+CGG | + | chr1_3:3657098-3657117 | None:intergenic | 20.0% |
| !! | TCATTATCTATATTTCTTTC+TGG | + | chr1_3:3657427-3657446 | None:intergenic | 20.0% |
| !! | AGAAAGAAATATAGATAATG+AGG | - | chr1_3:3657426-3657445 | Msa0097850:intron | 20.0% |
| !! | ACAAATATTGAATACCATAA+TGG | + | chr1_3:3658190-3658209 | None:intergenic | 20.0% |
| ! | GAACAAAAAAGATTATGAAG+AGG | + | chr1_3:3656607-3656626 | None:intergenic | 25.0% |
| ! | TAAGAAGATAAGGAAAAGAA+TGG | - | chr1_3:3656652-3656671 | Msa0097850:three_prime_UTR | 25.0% |
| ! | CATAGCTTAAGTAAAAACTA+TGG | - | chr1_3:3656984-3657003 | Msa0097850:exon | 25.0% |
| ! | GAAAATTGTTACTGCATATT+TGG | + | chr1_3:3657037-3657056 | None:intergenic | 25.0% |
| ! | AATGAACTTCTTTCATCATT+TGG | - | chr1_3:3657111-3657130 | Msa0097850:CDS | 25.0% |
| !!! | TACTTTTGTTTTGCATACAT+AGG | - | chr1_3:3657382-3657401 | Msa0097850:intron | 25.0% |
| !!! | ACTTTTGTTTTGCATACATA+GGG | - | chr1_3:3657383-3657402 | Msa0097850:intron | 25.0% |
| ! | AGGTAATGAATTCTAAATCT+AGG | - | chr1_3:3657446-3657465 | Msa0097850:intron | 25.0% |
| ! | AAACAGCTCAAAAAATCATA+TGG | + | chr1_3:3657512-3657531 | None:intergenic | 25.0% |
| ! | AGGTAATTAGTGTATATGTT+TGG | - | chr1_3:3657627-3657646 | Msa0097850:intron | 25.0% |
| !! | AGTGTATATGTTTGGAATTA+CGG | - | chr1_3:3657635-3657654 | Msa0097850:intron | 25.0% |
| !!! | TTTTGAGTTTGTGATTAGTT+TGG | - | chr1_3:3657778-3657797 | Msa0097850:intron | 25.0% |
| !!! | AAGTTTTGTATTCAACATCA+GGG | + | chr1_3:3657851-3657870 | None:intergenic | 25.0% |
| !!! | TAAGTTTTGTATTCAACATC+AGG | + | chr1_3:3657852-3657871 | None:intergenic | 25.0% |
| ! | TTTATAAAGGTTACAGTGAA+TGG | - | chr1_3:3657902-3657921 | Msa0097850:intron | 25.0% |
| ! | ATTGAGCTGAAAATAATTGA+TGG | + | chr1_3:3658417-3658436 | None:intergenic | 25.0% |
| !! | AACAGGTTGAAAATTAGAAT+AGG | - | chr1_3:3658464-3658483 | Msa0097850:five_prime_UTR | 25.0% |
| !!! | GCTTTATTTTCAATTTCTGA+TGG | + | chr1_3:3658534-3658553 | None:intergenic | 25.0% |
| ! | GAACAAAAAAGATTATGAAG+AGG | + | chr1_3:3656607-3656626 | None:intergenic | 25.0% |
| ! | TAAGAAGATAAGGAAAAGAA+TGG | - | chr1_3:3656652-3656671 | Msa0097850:three_prime_UTR | 25.0% |
| ! | CATAGCTTAAGTAAAAACTA+TGG | - | chr1_3:3656984-3657003 | Msa0097850:exon | 25.0% |
| ! | GAAAATTGTTACTGCATATT+TGG | + | chr1_3:3657037-3657056 | None:intergenic | 25.0% |
| ! | AATGAACTTCTTTCATCATT+TGG | - | chr1_3:3657111-3657130 | Msa0097850:CDS | 25.0% |
| !!! | TACTTTTGTTTTGCATACAT+AGG | - | chr1_3:3657382-3657401 | Msa0097850:intron | 25.0% |
| !!! | ACTTTTGTTTTGCATACATA+GGG | - | chr1_3:3657383-3657402 | Msa0097850:intron | 25.0% |
| ! | AGGTAATGAATTCTAAATCT+AGG | - | chr1_3:3657446-3657465 | Msa0097850:intron | 25.0% |
| ! | AAACAGCTCAAAAAATCATA+TGG | + | chr1_3:3657512-3657531 | None:intergenic | 25.0% |
| ! | AGGTAATTAGTGTATATGTT+TGG | - | chr1_3:3657627-3657646 | Msa0097850:intron | 25.0% |
| !! | AGTGTATATGTTTGGAATTA+CGG | - | chr1_3:3657635-3657654 | Msa0097850:intron | 25.0% |
| !!! | TTTTGAGTTTGTGATTAGTT+TGG | - | chr1_3:3657778-3657797 | Msa0097850:intron | 25.0% |
| !!! | AAGTTTTGTATTCAACATCA+GGG | + | chr1_3:3657851-3657870 | None:intergenic | 25.0% |
| !!! | TAAGTTTTGTATTCAACATC+AGG | + | chr1_3:3657852-3657871 | None:intergenic | 25.0% |
| ! | TTTATAAAGGTTACAGTGAA+TGG | - | chr1_3:3657902-3657921 | Msa0097850:intron | 25.0% |
| ! | ATTGAGCTGAAAATAATTGA+TGG | + | chr1_3:3658417-3658436 | None:intergenic | 25.0% |
| !! | AACAGGTTGAAAATTAGAAT+AGG | - | chr1_3:3658464-3658483 | Msa0097850:five_prime_UTR | 25.0% |
| !!! | GCTTTATTTTCAATTTCTGA+TGG | + | chr1_3:3658534-3658553 | None:intergenic | 25.0% |
| GAGAAATAAAACTAAAGTGG+AGG | + | chr1_3:3656583-3656602 | None:intergenic | 30.0% | |
| GGAGAGAAATAAAACTAAAG+TGG | + | chr1_3:3656586-3656605 | None:intergenic | 30.0% | |
| ! | ACCTCTTAGACATTTCTTTT+TGG | - | chr1_3:3656824-3656843 | Msa0097850:three_prime_UTR | 30.0% |
| ACCAAAAAGAAATGTCTAAG+AGG | + | chr1_3:3656828-3656847 | None:intergenic | 30.0% | |
| TTACTGCATATTTGGATTCA+CGG | + | chr1_3:3657029-3657048 | None:intergenic | 30.0% | |
| TGAAAATGCTTATGAACAAC+TGG | + | chr1_3:3657065-3657084 | None:intergenic | 30.0% | |
| CATTAACATGAAAATTACGG+TGG | + | chr1_3:3657095-3657114 | None:intergenic | 30.0% | |
| ! | TTCTTTCATCATTTGGCTTA+TGG | - | chr1_3:3657118-3657137 | Msa0097850:CDS | 30.0% |
| ! | AAGCAACTACAATTCTTTTG+AGG | - | chr1_3:3657213-3657232 | Msa0097850:intron | 30.0% |
| ! | AGCAACTACAATTCTTTTGA+GGG | - | chr1_3:3657214-3657233 | Msa0097850:intron | 30.0% |
| !!! | TACCTTCAAAGCTTTTTTCA+AGG | + | chr1_3:3657291-3657310 | None:intergenic | 30.0% |
| !! | AAAAGCTTTGAAGGTAACAA+AGG | - | chr1_3:3657295-3657314 | Msa0097850:intron | 30.0% |
| !!! | CTTTCTGGTTTGACAATTTT+TGG | + | chr1_3:3657412-3657431 | None:intergenic | 30.0% |
| !!! | TGTAGCCTTTTCTAAAATCA+TGG | - | chr1_3:3657708-3657727 | Msa0097850:intron | 30.0% |
| TTGAAACAACTCTTATGGTA+AGG | + | chr1_3:3657932-3657951 | None:intergenic | 30.0% | |
| ! | AGCATTTGAAACAACTCTTA+TGG | + | chr1_3:3657937-3657956 | None:intergenic | 30.0% |
| TTTGCTTGATCAGTTGAATA+TGG | + | chr1_3:3658030-3658049 | None:intergenic | 30.0% | |
| TATTCAACTGATCAAGCAAA+AGG | - | chr1_3:3658030-3658049 | Msa0097850:CDS | 30.0% | |
| ATTCAACTGATCAAGCAAAA+GGG | - | chr1_3:3658031-3658050 | Msa0097850:CDS | 30.0% | |
| AAAAATGCTGGGAAAATCAA+TGG | - | chr1_3:3658085-3658104 | Msa0097850:intron | 30.0% | |
| AATATTTGTTTGCAAGTGTG+CGG | - | chr1_3:3658201-3658220 | Msa0097850:intron | 30.0% | |
| !!! | AGTTCGTTACATGGTTTTAT+TGG | - | chr1_3:3658321-3658340 | Msa0097850:CDS | 30.0% |
| GAGAAATAAAACTAAAGTGG+AGG | + | chr1_3:3656583-3656602 | None:intergenic | 30.0% | |
| GGAGAGAAATAAAACTAAAG+TGG | + | chr1_3:3656586-3656605 | None:intergenic | 30.0% | |
| ! | ACCTCTTAGACATTTCTTTT+TGG | - | chr1_3:3656824-3656843 | Msa0097850:three_prime_UTR | 30.0% |
| ACCAAAAAGAAATGTCTAAG+AGG | + | chr1_3:3656828-3656847 | None:intergenic | 30.0% | |
| TTACTGCATATTTGGATTCA+CGG | + | chr1_3:3657029-3657048 | None:intergenic | 30.0% | |
| TGAAAATGCTTATGAACAAC+TGG | + | chr1_3:3657065-3657084 | None:intergenic | 30.0% | |
| CATTAACATGAAAATTACGG+TGG | + | chr1_3:3657095-3657114 | None:intergenic | 30.0% | |
| ! | TTCTTTCATCATTTGGCTTA+TGG | - | chr1_3:3657118-3657137 | Msa0097850:CDS | 30.0% |
| ! | AAGCAACTACAATTCTTTTG+AGG | - | chr1_3:3657213-3657232 | Msa0097850:intron | 30.0% |
| ! | AGCAACTACAATTCTTTTGA+GGG | - | chr1_3:3657214-3657233 | Msa0097850:intron | 30.0% |
| !!! | TACCTTCAAAGCTTTTTTCA+AGG | + | chr1_3:3657291-3657310 | None:intergenic | 30.0% |
| !! | AAAAGCTTTGAAGGTAACAA+AGG | - | chr1_3:3657295-3657314 | Msa0097850:intron | 30.0% |
| !!! | CTTTCTGGTTTGACAATTTT+TGG | + | chr1_3:3657412-3657431 | None:intergenic | 30.0% |
| !!! | TGTAGCCTTTTCTAAAATCA+TGG | - | chr1_3:3657708-3657727 | Msa0097850:intron | 30.0% |
| TTGAAACAACTCTTATGGTA+AGG | + | chr1_3:3657932-3657951 | None:intergenic | 30.0% | |
| ! | AGCATTTGAAACAACTCTTA+TGG | + | chr1_3:3657937-3657956 | None:intergenic | 30.0% |
| TTTGCTTGATCAGTTGAATA+TGG | + | chr1_3:3658030-3658049 | None:intergenic | 30.0% | |
| TATTCAACTGATCAAGCAAA+AGG | - | chr1_3:3658030-3658049 | Msa0097850:CDS | 30.0% | |
| ATTCAACTGATCAAGCAAAA+GGG | - | chr1_3:3658031-3658050 | Msa0097850:CDS | 30.0% | |
| AAAAATGCTGGGAAAATCAA+TGG | - | chr1_3:3658085-3658104 | Msa0097850:intron | 30.0% | |
| AATATTTGTTTGCAAGTGTG+CGG | - | chr1_3:3658201-3658220 | Msa0097850:intron | 30.0% | |
| !!! | AGTTCGTTACATGGTTTTAT+TGG | - | chr1_3:3658321-3658340 | Msa0097850:CDS | 30.0% |
| !! | TTCATAGACTTGTTGCAAGT+TGG | - | chr1_3:3656624-3656643 | Msa0097850:three_prime_UTR | 35.0% |
| ! | CTAGTTTAGCCTTCTAGTAT+TGG | - | chr1_3:3656862-3656881 | Msa0097850:three_prime_UTR | 35.0% |
| CTAACAGATCCAATACTAGA+AGG | + | chr1_3:3656874-3656893 | None:intergenic | 35.0% | |
| ! | TTTCATCATTTGGCTTATGG+AGG | - | chr1_3:3657121-3657140 | Msa0097850:CDS | 35.0% |
| ! | TACCAGTTCTTTTGAACAGT+TGG | + | chr1_3:3657267-3657286 | None:intergenic | 35.0% |
| ! | AGCCTTGAAAAAAGCTTTGA+AGG | - | chr1_3:3657286-3657305 | Msa0097850:intron | 35.0% |
| ! | AAGTATGTTTGGTGGAACAA+GGG | - | chr1_3:3657562-3657581 | Msa0097850:intron | 35.0% |
| ACACTAATTACCTTCTCTGT+TGG | + | chr1_3:3657620-3657639 | None:intergenic | 35.0% | |
| !! | CGGCTAGTTTAACAATATCA+CGG | - | chr1_3:3657655-3657674 | Msa0097850:intron | 35.0% |
| !!! | AGCCTTTTCTAAAATCATGG+TGG | - | chr1_3:3657711-3657730 | Msa0097850:intron | 35.0% |
| !! | GTCCACCATGATTTTAGAAA+AGG | + | chr1_3:3657716-3657735 | None:intergenic | 35.0% |
| ! | TTTTCCCAGCATTTTTCTCA+TGG | + | chr1_3:3658081-3658100 | None:intergenic | 35.0% |
| !! | CATGTTTTTGCTTGCCATTA+TGG | - | chr1_3:3658173-3658192 | Msa0097850:intron | 35.0% |
| AAGCGTATTAATAGAGTTCG+TGG | - | chr1_3:3658375-3658394 | Msa0097850:CDS | 35.0% | |
| AACATAGCAACTTGTAGTTG+TGG | - | chr1_3:3658438-3658457 | Msa0097850:exon | 35.0% | |
| ACATAGCAACTTGTAGTTGT+GGG | - | chr1_3:3658439-3658458 | Msa0097850:exon | 35.0% | |
| ! | TTTTCAATTTCTGATGGCAC+TGG | + | chr1_3:3658528-3658547 | None:intergenic | 35.0% |
| !! | TTCATAGACTTGTTGCAAGT+TGG | - | chr1_3:3656624-3656643 | Msa0097850:three_prime_UTR | 35.0% |
| ! | CTAGTTTAGCCTTCTAGTAT+TGG | - | chr1_3:3656862-3656881 | Msa0097850:three_prime_UTR | 35.0% |
| CTAACAGATCCAATACTAGA+AGG | + | chr1_3:3656874-3656893 | None:intergenic | 35.0% | |
| ! | TTTCATCATTTGGCTTATGG+AGG | - | chr1_3:3657121-3657140 | Msa0097850:CDS | 35.0% |
| ! | TACCAGTTCTTTTGAACAGT+TGG | + | chr1_3:3657267-3657286 | None:intergenic | 35.0% |
| ! | AGCCTTGAAAAAAGCTTTGA+AGG | - | chr1_3:3657286-3657305 | Msa0097850:intron | 35.0% |
| ! | AAGTATGTTTGGTGGAACAA+GGG | - | chr1_3:3657562-3657581 | Msa0097850:intron | 35.0% |
| ACACTAATTACCTTCTCTGT+TGG | + | chr1_3:3657620-3657639 | None:intergenic | 35.0% | |
| !! | CGGCTAGTTTAACAATATCA+CGG | - | chr1_3:3657655-3657674 | Msa0097850:intron | 35.0% |
| !!! | AGCCTTTTCTAAAATCATGG+TGG | - | chr1_3:3657711-3657730 | Msa0097850:intron | 35.0% |
| !! | GTCCACCATGATTTTAGAAA+AGG | + | chr1_3:3657716-3657735 | None:intergenic | 35.0% |
| ! | TTTTCCCAGCATTTTTCTCA+TGG | + | chr1_3:3658081-3658100 | None:intergenic | 35.0% |
| !! | CATGTTTTTGCTTGCCATTA+TGG | - | chr1_3:3658173-3658192 | Msa0097850:intron | 35.0% |
| AAGCGTATTAATAGAGTTCG+TGG | - | chr1_3:3658375-3658394 | Msa0097850:CDS | 35.0% | |
| AACATAGCAACTTGTAGTTG+TGG | - | chr1_3:3658438-3658457 | Msa0097850:exon | 35.0% | |
| ACATAGCAACTTGTAGTTGT+GGG | - | chr1_3:3658439-3658458 | Msa0097850:exon | 35.0% | |
| ! | TTTTCAATTTCTGATGGCAC+TGG | + | chr1_3:3658528-3658547 | None:intergenic | 35.0% |
| ACTAAAGTGGAGGAGAAATG+TGG | + | chr1_3:3656573-3656592 | None:intergenic | 40.0% | |
| ! | GTTGGTGAGGTAAGAAGATA+AGG | - | chr1_3:3656642-3656661 | Msa0097850:three_prime_UTR | 40.0% |
| AGGAAAAGAATGGCATTTGC+AGG | - | chr1_3:3656662-3656681 | Msa0097850:three_prime_UTR | 40.0% | |
| ! | AGGAACAACTCAGAAGTGTA+TGG | - | chr1_3:3656682-3656701 | Msa0097850:three_prime_UTR | 40.0% |
| ! | GACATCTGAAACAAGCTTTG+TGG | + | chr1_3:3656763-3656782 | None:intergenic | 40.0% |
| GACCAACTGTTCAAAAGAAC+TGG | - | chr1_3:3657262-3657281 | Msa0097850:intron | 40.0% | |
| GCTAAAGCCTCAAGTATGTT+TGG | - | chr1_3:3657551-3657570 | Msa0097850:CDS | 40.0% | |
| AAAGCCTCAAGTATGTTTGG+TGG | - | chr1_3:3657554-3657573 | Msa0097850:CDS | 40.0% | |
| TGTTCCACCAAACATACTTG+AGG | + | chr1_3:3657561-3657580 | None:intergenic | 40.0% | |
| ! | CAAGTATGTTTGGTGGAACA+AGG | - | chr1_3:3657561-3657580 | Msa0097850:intron | 40.0% |
| AACAGTGTATCCAACAGAGA+AGG | - | chr1_3:3657607-3657626 | Msa0097850:intron | 40.0% | |
| GTTCGGATTTGTGATGAGTT+TGG | + | chr1_3:3657750-3657769 | None:intergenic | 40.0% | |
| TGCAACTTTCGCCAAAATCA+CGG | + | chr1_3:3657822-3657841 | None:intergenic | 40.0% | |
| ! | AGTTGTTTCAAATGCTGCCA+TGG | - | chr1_3:3657941-3657960 | Msa0097850:intron | 40.0% |
| ! | TCATGGGCTATGTAATTGGA+AGG | + | chr1_3:3657983-3658002 | None:intergenic | 40.0% |
| TTCCAATTACATAGCCCATG+AGG | - | chr1_3:3657982-3658001 | Msa0097850:CDS | 40.0% | |
| TCCAATTACATAGCCCATGA+GGG | - | chr1_3:3657983-3658002 | Msa0097850:CDS | 40.0% | |
| GCTTGATCAGTTGAATATGG+TGG | + | chr1_3:3658027-3658046 | None:intergenic | 40.0% | |
| GTGACCATGAGAAAAATGCT+GGG | - | chr1_3:3658074-3658093 | Msa0097850:intron | 40.0% | |
| ACGGAAACCAAATGTAACTC+CGG | - | chr1_3:3658293-3658312 | Msa0097850:intron | 40.0% | |
| AACCAAATGTAACTCCGGTA+TGG | - | chr1_3:3658298-3658317 | Msa0097850:intron | 40.0% | |
| !!! | TACATGGTTTTATTGGCGTC+TGG | - | chr1_3:3658328-3658347 | Msa0097850:CDS | 40.0% |
| !! | GGCACTGGTAAATGTAAGAA+AGG | + | chr1_3:3658513-3658532 | None:intergenic | 40.0% |
| ACTAAAGTGGAGGAGAAATG+TGG | + | chr1_3:3656573-3656592 | None:intergenic | 40.0% | |
| ! | GTTGGTGAGGTAAGAAGATA+AGG | - | chr1_3:3656642-3656661 | Msa0097850:three_prime_UTR | 40.0% |
| AGGAAAAGAATGGCATTTGC+AGG | - | chr1_3:3656662-3656681 | Msa0097850:three_prime_UTR | 40.0% | |
| ! | AGGAACAACTCAGAAGTGTA+TGG | - | chr1_3:3656682-3656701 | Msa0097850:three_prime_UTR | 40.0% |
| ! | GACATCTGAAACAAGCTTTG+TGG | + | chr1_3:3656763-3656782 | None:intergenic | 40.0% |
| GACCAACTGTTCAAAAGAAC+TGG | - | chr1_3:3657262-3657281 | Msa0097850:intron | 40.0% | |
| GCTAAAGCCTCAAGTATGTT+TGG | - | chr1_3:3657551-3657570 | Msa0097850:CDS | 40.0% | |
| AAAGCCTCAAGTATGTTTGG+TGG | - | chr1_3:3657554-3657573 | Msa0097850:CDS | 40.0% | |
| TGTTCCACCAAACATACTTG+AGG | + | chr1_3:3657561-3657580 | None:intergenic | 40.0% | |
| ! | CAAGTATGTTTGGTGGAACA+AGG | - | chr1_3:3657561-3657580 | Msa0097850:intron | 40.0% |
| AACAGTGTATCCAACAGAGA+AGG | - | chr1_3:3657607-3657626 | Msa0097850:intron | 40.0% | |
| GTTCGGATTTGTGATGAGTT+TGG | + | chr1_3:3657750-3657769 | None:intergenic | 40.0% | |
| TGCAACTTTCGCCAAAATCA+CGG | + | chr1_3:3657822-3657841 | None:intergenic | 40.0% | |
| ! | AGTTGTTTCAAATGCTGCCA+TGG | - | chr1_3:3657941-3657960 | Msa0097850:intron | 40.0% |
| ! | TCATGGGCTATGTAATTGGA+AGG | + | chr1_3:3657983-3658002 | None:intergenic | 40.0% |
| TTCCAATTACATAGCCCATG+AGG | - | chr1_3:3657982-3658001 | Msa0097850:CDS | 40.0% | |
| TCCAATTACATAGCCCATGA+GGG | - | chr1_3:3657983-3658002 | Msa0097850:CDS | 40.0% | |
| GCTTGATCAGTTGAATATGG+TGG | + | chr1_3:3658027-3658046 | None:intergenic | 40.0% | |
| GTGACCATGAGAAAAATGCT+GGG | - | chr1_3:3658074-3658093 | Msa0097850:intron | 40.0% | |
| ACGGAAACCAAATGTAACTC+CGG | - | chr1_3:3658293-3658312 | Msa0097850:intron | 40.0% | |
| AACCAAATGTAACTCCGGTA+TGG | - | chr1_3:3658298-3658317 | Msa0097850:intron | 40.0% | |
| !!! | TACATGGTTTTATTGGCGTC+TGG | - | chr1_3:3658328-3658347 | Msa0097850:CDS | 40.0% |
| !! | GGCACTGGTAAATGTAAGAA+AGG | + | chr1_3:3658513-3658532 | None:intergenic | 40.0% |
| !! | AGACTTGTTGCAAGTTGGTG+AGG | - | chr1_3:3656629-3656648 | Msa0097850:three_prime_UTR | 45.0% |
| TTCAGATGTCACCACTGCAA+AGG | - | chr1_3:3656773-3656792 | Msa0097850:three_prime_UTR | 45.0% | |
| GAGAGAGACATAGACCTTGA+GGG | + | chr1_3:3656801-3656820 | None:intergenic | 45.0% | |
| TGAGAGAGACATAGACCTTG+AGG | + | chr1_3:3656802-3656821 | None:intergenic | 45.0% | |
| TTGAACAGTTGGTCGAAGTG+TGG | + | chr1_3:3657256-3657275 | None:intergenic | 45.0% | |
| GGAACAAGGGACAAATGTTC+TGG | - | chr1_3:3657575-3657594 | Msa0097850:intron | 45.0% | |
| GATGAGTTTGGCAGAATCTG+TGG | + | chr1_3:3657738-3657757 | None:intergenic | 45.0% | |
| ! | TCATTGTGCGACCGTGATTT+TGG | - | chr1_3:3657808-3657827 | Msa0097850:intron | 45.0% |
| TGTTTCAAATGCTGCCATGG+AGG | - | chr1_3:3657944-3657963 | Msa0097850:intron | 45.0% | |
| GTTTCAAATGCTGCCATGGA+GGG | - | chr1_3:3657945-3657964 | Msa0097850:intron | 45.0% | |
| GACTAATAGTACACCCTCCA+TGG | + | chr1_3:3657961-3657980 | None:intergenic | 45.0% | |
| ! | TCCCTCATGGGCTATGTAAT+TGG | + | chr1_3:3657987-3658006 | None:intergenic | 45.0% |
| ! | GCAGTAGAGTTTTCCCTCAT+GGG | + | chr1_3:3657999-3658018 | None:intergenic | 45.0% |
| ! | TGCAGTAGAGTTTTCCCTCA+TGG | + | chr1_3:3658000-3658019 | None:intergenic | 45.0% |
| GGAAATTTGAGCCAGCTTGA+AGG | - | chr1_3:3658052-3658071 | Msa0097850:intron | 45.0% | |
| GGTGACCATGAGAAAAATGC+TGG | - | chr1_3:3658073-3658092 | Msa0097850:intron | 45.0% | |
| CTCCATACCGGAGTTACATT+TGG | + | chr1_3:3658303-3658322 | None:intergenic | 45.0% | |
| CCATGTAACGAACTCCATAC+CGG | + | chr1_3:3658315-3658334 | None:intergenic | 45.0% | |
| ! | CTGGACTCTGATGCATCTTT+TGG | - | chr1_3:3658347-3658366 | Msa0097850:CDS | 45.0% |
| ACTTGTAGTTGTGGGTGAAC+AGG | - | chr1_3:3658447-3658466 | Msa0097850:five_prime_UTR | 45.0% | |
| !! | AGACTTGTTGCAAGTTGGTG+AGG | - | chr1_3:3656629-3656648 | Msa0097850:three_prime_UTR | 45.0% |
| TTCAGATGTCACCACTGCAA+AGG | - | chr1_3:3656773-3656792 | Msa0097850:three_prime_UTR | 45.0% | |
| GAGAGAGACATAGACCTTGA+GGG | + | chr1_3:3656801-3656820 | None:intergenic | 45.0% | |
| TGAGAGAGACATAGACCTTG+AGG | + | chr1_3:3656802-3656821 | None:intergenic | 45.0% | |
| TTGAACAGTTGGTCGAAGTG+TGG | + | chr1_3:3657256-3657275 | None:intergenic | 45.0% | |
| GGAACAAGGGACAAATGTTC+TGG | - | chr1_3:3657575-3657594 | Msa0097850:intron | 45.0% | |
| GATGAGTTTGGCAGAATCTG+TGG | + | chr1_3:3657738-3657757 | None:intergenic | 45.0% | |
| ! | TCATTGTGCGACCGTGATTT+TGG | - | chr1_3:3657808-3657827 | Msa0097850:intron | 45.0% |
| TGTTTCAAATGCTGCCATGG+AGG | - | chr1_3:3657944-3657963 | Msa0097850:intron | 45.0% | |
| GTTTCAAATGCTGCCATGGA+GGG | - | chr1_3:3657945-3657964 | Msa0097850:intron | 45.0% | |
| GACTAATAGTACACCCTCCA+TGG | + | chr1_3:3657961-3657980 | None:intergenic | 45.0% | |
| ! | TCCCTCATGGGCTATGTAAT+TGG | + | chr1_3:3657987-3658006 | None:intergenic | 45.0% |
| ! | GCAGTAGAGTTTTCCCTCAT+GGG | + | chr1_3:3657999-3658018 | None:intergenic | 45.0% |
| ! | TGCAGTAGAGTTTTCCCTCA+TGG | + | chr1_3:3658000-3658019 | None:intergenic | 45.0% |
| GGAAATTTGAGCCAGCTTGA+AGG | - | chr1_3:3658052-3658071 | Msa0097850:intron | 45.0% | |
| GGTGACCATGAGAAAAATGC+TGG | - | chr1_3:3658073-3658092 | Msa0097850:intron | 45.0% | |
| CTCCATACCGGAGTTACATT+TGG | + | chr1_3:3658303-3658322 | None:intergenic | 45.0% | |
| CCATGTAACGAACTCCATAC+CGG | + | chr1_3:3658315-3658334 | None:intergenic | 45.0% | |
| ! | CTGGACTCTGATGCATCTTT+TGG | - | chr1_3:3658347-3658366 | Msa0097850:CDS | 45.0% |
| ACTTGTAGTTGTGGGTGAAC+AGG | - | chr1_3:3658447-3658466 | Msa0097850:five_prime_UTR | 45.0% | |
| TCTCATGGTCACCTTCAAGC+TGG | + | chr1_3:3658066-3658085 | None:intergenic | 50.0% | |
| CCGGTATGGAGTTCGTTACA+TGG | - | chr1_3:3658312-3658331 | Msa0097850:CDS | 50.0% | |
| TCTCATGGTCACCTTCAAGC+TGG | + | chr1_3:3658066-3658085 | None:intergenic | 50.0% | |
| CCGGTATGGAGTTCGTTACA+TGG | - | chr1_3:3658312-3658331 | Msa0097850:CDS | 50.0% | |
| CCTTGAGGGTTCCTTTGCAG+TGG | + | chr1_3:3656787-3656806 | None:intergenic | 55.0% | |
| CCACTGCAAAGGAACCCTCA+AGG | - | chr1_3:3656784-3656803 | Msa0097850:three_prime_UTR | 55.0% | |
| ! | CTTGAGGCTTTAGCTGCTGC+AGG | + | chr1_3:3657545-3657564 | None:intergenic | 55.0% |
| CCTTGAGGGTTCCTTTGCAG+TGG | + | chr1_3:3656787-3656806 | None:intergenic | 55.0% | |
| CCACTGCAAAGGAACCCTCA+AGG | - | chr1_3:3656784-3656803 | Msa0097850:three_prime_UTR | 55.0% | |
| ! | CTTGAGGCTTTAGCTGCTGC+AGG | + | chr1_3:3657545-3657564 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 3656561 | 3658556 | 3656561 | ID=Msa0097850;Name=Msa0097850 |
| chr1_3 | mRNA | 3656561 | 3658556 | 3656561 | ID=Msa0097850-mRNA-1;Parent=Msa0097850;Name=Msa0097850-mRNA-1;_AED=0.15;_eAED=0.15;_QI=110|0.6|0.66|1|1|1|6|424|207 |
| chr1_3 | exon | 3656561 | 3657206 | 3656561 | ID=Msa0097850-mRNA-1:exon:1172;Parent=Msa0097850-mRNA-1 |
| chr1_3 | exon | 3657489 | 3657578 | 3657489 | ID=Msa0097850-mRNA-1:exon:1171;Parent=Msa0097850-mRNA-1 |
| chr1_3 | exon | 3657670 | 3657713 | 3657670 | ID=Msa0097850-mRNA-1:exon:1170;Parent=Msa0097850-mRNA-1 |
| chr1_3 | exon | 3657810 | 3657865 | 3657810 | ID=Msa0097850-mRNA-1:exon:1169;Parent=Msa0097850-mRNA-1 |
| chr1_3 | exon | 3657975 | 3658051 | 3657975 | ID=Msa0097850-mRNA-1:exon:1168;Parent=Msa0097850-mRNA-1 |
| chr1_3 | exon | 3658312 | 3658556 | 3658312 | ID=Msa0097850-mRNA-1:exon:1167;Parent=Msa0097850-mRNA-1 |
| chr1_3 | five_prime_UTR | 3658447 | 3658556 | 3658447 | ID=Msa0097850-mRNA-1:five_prime_utr;Parent=Msa0097850-mRNA-1 |
| chr1_3 | CDS | 3658312 | 3658446 | 3658312 | ID=Msa0097850-mRNA-1:cds;Parent=Msa0097850-mRNA-1 |
| chr1_3 | CDS | 3657975 | 3658051 | 3657975 | ID=Msa0097850-mRNA-1:cds;Parent=Msa0097850-mRNA-1 |
| chr1_3 | CDS | 3657810 | 3657865 | 3657810 | ID=Msa0097850-mRNA-1:cds;Parent=Msa0097850-mRNA-1 |
| chr1_3 | CDS | 3657670 | 3657713 | 3657670 | ID=Msa0097850-mRNA-1:cds;Parent=Msa0097850-mRNA-1 |
| chr1_3 | CDS | 3657489 | 3657578 | 3657489 | ID=Msa0097850-mRNA-1:cds;Parent=Msa0097850-mRNA-1 |
| chr1_3 | CDS | 3656985 | 3657206 | 3656985 | ID=Msa0097850-mRNA-1:cds;Parent=Msa0097850-mRNA-1 |
| chr1_3 | three_prime_UTR | 3656561 | 3656984 | 3656561 | ID=Msa0097850-mRNA-1:three_prime_utr;Parent=Msa0097850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
