Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1218670 | XP_024636842.1 | 96.852 | 413 | 13 | 0 | 1 | 413 | 1 | 413 | 0.0 | 822 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020630 | Msa1218670 | 0.802629 | 5.124061e-49 | -8.615850e-47 |
| Msa0027540 | Msa1218670 | 0.820609 | 6.265447e-53 | -8.615850e-47 |
| Msa0059960 | Msa1218670 | -0.817092 | 3.945765e-52 | -8.615850e-47 |
| Msa0075310 | Msa1218670 | 0.816035 | 6.805244e-52 | -8.615850e-47 |
| Msa0090800 | Msa1218670 | 0.807123 | 5.894459e-50 | -8.615850e-47 |
| Msa0091480 | Msa1218670 | 0.800676 | 1.289131e-48 | -8.615850e-47 |
| Msa0619330 | Msa1218670 | 0.803471 | 3.430860e-49 | -8.615850e-47 |
| Msa0624730 | Msa1218670 | 0.802535 | 5.358238e-49 | -8.615850e-47 |
| Msa0661470 | Msa1218670 | 0.800204 | 1.608641e-48 | -8.615850e-47 |
| Msa0674220 | Msa1218670 | 0.813245 | 2.821763e-51 | -8.615850e-47 |
| Msa0674300 | Msa1218670 | 0.803827 | 2.894817e-49 | -8.615850e-47 |
| Msa0685540 | Msa1218670 | 0.812726 | 3.667545e-51 | -8.615850e-47 |
| Msa0707780 | Msa1218670 | 0.813339 | 2.690803e-51 | -8.615850e-47 |
| Msa0730180 | Msa1218670 | 0.804887 | 1.740992e-49 | -8.615850e-47 |
| Msa0770430 | Msa1218670 | 0.802133 | 6.482703e-49 | -8.615850e-47 |
| Msa0780140 | Msa1218670 | 0.801124 | 1.044224e-48 | -8.615850e-47 |
| Msa0783340 | Msa1218670 | 0.814200 | 1.739309e-51 | -8.615850e-47 |
| Msa0123170 | Msa1218670 | 0.827236 | 1.748648e-54 | -8.615850e-47 |
| Msa0149500 | Msa1218670 | 0.818320 | 2.084297e-52 | -8.615850e-47 |
| Msa0159750 | Msa1218670 | 0.802489 | 5.477029e-49 | -8.615850e-47 |
| Msa0207000 | Msa1218670 | 0.801071 | 1.070247e-48 | -8.615850e-47 |
| Msa0217470 | Msa1218670 | 0.800142 | 1.655780e-48 | -8.615850e-47 |
| Msa0227500 | Msa1218670 | 0.804279 | 2.331430e-49 | -8.615850e-47 |
| Msa0382560 | Msa1218670 | 0.817038 | 4.057361e-52 | -8.615850e-47 |
| Msa0436090 | Msa1218670 | 0.800518 | 1.387860e-48 | -8.615850e-47 |
| Msa0458790 | Msa1218670 | 0.805292 | 1.432199e-49 | -8.615850e-47 |
| Msa1024140 | Msa1218670 | 0.812741 | 3.640066e-51 | -8.615850e-47 |
| Msa0298940 | Msa1218670 | 0.825473 | 4.599121e-54 | -8.615850e-47 |
| Msa0298970 | Msa1218670 | 0.810734 | 9.948751e-51 | -8.615850e-47 |
| Msa0301180 | Msa1218670 | 0.817467 | 3.248502e-52 | -8.615850e-47 |
| Msa0320540 | Msa1218670 | 0.818866 | 1.567240e-52 | -8.615850e-47 |
| Msa0344070 | Msa1218670 | 0.800147 | 1.651613e-48 | -8.615850e-47 |
| Msa1107970 | Msa1218670 | 0.809662 | 1.693529e-50 | -8.615850e-47 |
| Msa1111630 | Msa1218670 | 0.801411 | 9.117864e-49 | -8.615850e-47 |
| Msa1133660 | Msa1218670 | 0.800539 | 1.374443e-48 | -8.615850e-47 |
| Msa1218670 | Msa1223460 | 0.807442 | 5.045540e-50 | -8.615850e-47 |
| Msa1218670 | Msa1254770 | 0.804751 | 1.858640e-49 | -8.615850e-47 |
| Msa1218670 | Msa1254800 | 0.805401 | 1.359136e-49 | -8.615850e-47 |
| Msa1218670 | Msa1352290 | 0.819555 | 1.092457e-52 | -8.615850e-47 |
| Msa1218670 | Msa1354040 | 0.806005 | 1.014908e-49 | -8.615850e-47 |
| Msa1218670 | Msa1419090 | 0.970239 | 2.574742e-131 | -8.615850e-47 |
| Msa1218670 | Msa1428420 | 0.807160 | 5.790199e-50 | -8.615850e-47 |
| Msa1218670 | Msa1435670 | 0.800253 | 1.571575e-48 | -8.615850e-47 |
| Msa1218670 | Msa1439210 | 0.950178 | 2.811561e-108 | -8.615850e-47 |
| Msa1218670 | Msa1456810 | 0.817477 | 3.231588e-52 | -8.615850e-47 |
| Msa0524050 | Msa1218670 | 0.810534 | 1.099141e-50 | -8.615850e-47 |
| Msa0524120 | Msa1218670 | 0.815478 | 9.055988e-52 | -8.615850e-47 |
| Msa0525240 | Msa1218670 | 0.808187 | 3.504003e-50 | -8.615850e-47 |
| Msa0575250 | Msa1218670 | 0.803645 | 3.157649e-49 | -8.615850e-47 |
| Msa0576420 | Msa1218670 | 0.830117 | 3.517683e-55 | -8.615850e-47 |
| Msa0582110 | Msa1218670 | 0.806838 | 6.771074e-50 | -8.615850e-47 |
| Msa0596100 | Msa1218670 | 0.803662 | 3.132376e-49 | -8.615850e-47 |
| Msa0600390 | Msa1218670 | 0.802650 | 5.072720e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1218670 | MtrunA17_Chr4g0068311 | 96.154 | 416 | 13 | 1 | 1 | 413 | 1 | 416 | 0.0 | 775 |
| Msa1218670 | MtrunA17_Chr7g0270071 | 38.756 | 418 | 191 | 11 | 52 | 406 | 144 | 559 | 8.18e-65 | 217 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1218670 | AT3G06660.1 | 42.318 | 371 | 180 | 11 | 55 | 407 | 66 | 420 | 8.58e-62 | 206 |
| Msa1218670 | AT2G47350.1 | 38.760 | 387 | 183 | 13 | 53 | 409 | 123 | 485 | 1.02e-55 | 191 |
| Msa1218670 | AT1G56460.1 | 62.676 | 142 | 53 | 0 | 262 | 403 | 359 | 500 | 1.02e-51 | 181 |
| Msa1218670 | AT1G56460.2 | 62.676 | 142 | 53 | 0 | 262 | 403 | 389 | 530 | 2.36e-51 | 181 |
| Msa1218670 | AT1G56460.3 | 49.194 | 124 | 63 | 0 | 262 | 385 | 359 | 482 | 1.07e-25 | 109 |
Find 102 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACCAAGTATCTTCTTAA+TGG | 0.185993 | 8_1:+81305081 | None:intergenic |
| AAGAAGCTTAAACTCAAATT+TGG | 0.203722 | 8_1:-81307931 | Msa1218670:CDS |
| TTGAGACAAATAGGTCTATT+TGG | 0.207114 | 8_1:+81304424 | None:intergenic |
| TGCCTCCTTGATTGTCCTTA+TGG | 0.246866 | 8_1:+81306901 | None:intergenic |
| TCTTTCAAAGATGCGCTATC+TGG | 0.274602 | 8_1:-81306693 | Msa1218670:CDS |
| TAGTCCTTGTAAATAGTAAT+TGG | 0.287824 | 8_1:-81304511 | Msa1218670:three_prime_UTR |
| AAGCTTCCCCTTTGCAGTCT+TGG | 0.297324 | 8_1:-81304580 | Msa1218670:CDS |
| CAGTAACTCGCTTGCTCTTA+CGG | 0.297893 | 8_1:+81307021 | None:intergenic |
| AAACACTGTTCGATGGACTA+TGG | 0.302142 | 8_1:-81304891 | Msa1218670:CDS |
| TTGCGGGTGGAATGCTTTCT+TGG | 0.309324 | 8_1:+81306738 | None:intergenic |
| AAACCAACAGATTCCCTCTT+TGG | 0.309756 | 8_1:+81306768 | None:intergenic |
| GACTTGGAAGGTTTGTGATT+TGG | 0.321358 | 8_1:-81304472 | Msa1218670:three_prime_UTR |
| GAGAGGCCATGGGGACAAAT+TGG | 0.343442 | 8_1:-81307120 | Msa1218670:CDS |
| TCCTCTTTCTTCTTCCTAGC+AGG | 0.346247 | 8_1:+81305055 | None:intergenic |
| GCAATATTTCAGCATTACTT+TGG | 0.348288 | 8_1:-81308039 | Msa1218670:CDS |
| AGTGATGAATCAATATTAGA+AGG | 0.348762 | 8_1:-81306798 | Msa1218670:CDS |
| TGTACCTGTTAGACATTGTT+TGG | 0.357620 | 8_1:+81304813 | None:intergenic |
| CAATATTTCAGCATTACTTT+GGG | 0.379707 | 8_1:-81308038 | Msa1218670:CDS |
| TGAACAATTATGATTATTGC+GGG | 0.388645 | 8_1:+81306722 | None:intergenic |
| GATACAATTGTTGTTTCTGA+TGG | 0.391441 | 8_1:-81307976 | Msa1218670:CDS |
| TTGTAAGCATTAGTGCAGTT+TGG | 0.393740 | 8_1:+81304622 | None:intergenic |
| TCTTCCAAACAATGTCTAAC+AGG | 0.396325 | 8_1:-81304817 | Msa1218670:intron |
| GACAAAGAATTGAGACAAAT+AGG | 0.409683 | 8_1:+81304415 | None:intergenic |
| AGTAACTCGCTTGCTCTTAC+GGG | 0.433532 | 8_1:+81307022 | None:intergenic |
| ATTGATTCATCACTTGATGT+AGG | 0.433917 | 8_1:+81306807 | None:intergenic |
| CCGGAAAATCAAAACTTAAC+CGG | 0.434773 | 8_1:-81308343 | Msa1218670:five_prime_UTR |
| CTGGACATCGTGGCTGTTTG+TGG | 0.450910 | 8_1:+81308296 | None:intergenic |
| GTAACAACCAAGACTGCAAA+GGG | 0.456962 | 8_1:+81304573 | None:intergenic |
| AAAAGTTACTACGGTTCCAT+TGG | 0.465504 | 8_1:+81304865 | None:intergenic |
| GCACTAATGCTTACAAGTAT+CGG | 0.471350 | 8_1:-81304615 | Msa1218670:CDS |
| CACTAATGCTTACAAGTATC+GGG | 0.471763 | 8_1:-81304614 | Msa1218670:CDS |
| GGAAGGTTTGTGATTTGGCC+AGG | 0.475821 | 8_1:-81304467 | Msa1218670:three_prime_UTR |
| AGTGTTTGATGCTAGATTGA+AGG | 0.479209 | 8_1:+81304907 | None:intergenic |
| CTTTCAAAGATGCGCTATCT+GGG | 0.481686 | 8_1:-81306692 | Msa1218670:CDS |
| AAGCTTAAACTCAAATTTGG+AGG | 0.488206 | 8_1:-81307928 | Msa1218670:CDS |
| GCAAGCATTATTGACATCTC+AGG | 0.488483 | 8_1:-81306663 | Msa1218670:intron |
| AAATCCAATTACTATTTACA+AGG | 0.489122 | 8_1:+81304507 | None:intergenic |
| AAAGTTACTACGGTTCCATT+GGG | 0.491895 | 8_1:+81304866 | None:intergenic |
| GACATTGTTTGGAAGATACT+TGG | 0.494136 | 8_1:+81304824 | None:intergenic |
| GGAAAAGATGAATAAGCAAA+GGG | 0.498530 | 8_1:-81305035 | Msa1218670:CDS |
| GAAGGCAGCTAGGGAGGCCG+AGG | 0.498972 | 8_1:-81305241 | Msa1218670:intron |
| TAGAAGGGAAGAAGCCAAAG+AGG | 0.498989 | 8_1:-81306782 | Msa1218670:CDS |
| AGGAAAGAACTATGAGGATC+GGG | 0.505453 | 8_1:-81306847 | Msa1218670:CDS |
| GTGTTTGATGCTAGATTGAA+GGG | 0.505698 | 8_1:+81304908 | None:intergenic |
| AACACTGTTCGATGGACTAT+GGG | 0.508722 | 8_1:-81304890 | Msa1218670:CDS |
| TCAAGCTGAGAAGGCAGCTA+GGG | 0.513394 | 8_1:-81305250 | Msa1218670:CDS |
| GCATTGCGAGGATCGGAAGA+AGG | 0.519451 | 8_1:+81307880 | None:intergenic |
| TGAGAGATGTGCCATGGATG+TGG | 0.520572 | 8_1:-81307000 | Msa1218670:CDS |
| AAGAGGAGTTAGTCGCCATA+AGG | 0.521573 | 8_1:-81306916 | Msa1218670:CDS |
| GCAAAGGGGAAGCTTTGACT+TGG | 0.523120 | 8_1:+81304588 | None:intergenic |
| TTGATTCATCACTTGATGTA+GGG | 0.523562 | 8_1:+81306808 | None:intergenic |
| TACCTTAGCATTGCGAGGAT+CGG | 0.526162 | 8_1:+81307873 | None:intergenic |
| GACATCGTGGCTGTTTGTGG+TGG | 0.526939 | 8_1:+81308299 | None:intergenic |
| AGGAAAAGATGAATAAGCAA+AGG | 0.527756 | 8_1:-81305036 | Msa1218670:CDS |
| ATGTCAATAATGCTTGCAAC+TGG | 0.529585 | 8_1:+81306669 | None:intergenic |
| GCGAGGATCGGAAGAAGGCT+TGG | 0.529979 | 8_1:+81307885 | None:intergenic |
| GACCTAAAATTAACTGGACA+TGG | 0.532237 | 8_1:+81304350 | None:intergenic |
| GGTGTTTGTAAAGATGCATC+AGG | 0.533508 | 8_1:-81306867 | Msa1218670:CDS |
| CACAAACAGCCACGATGTCC+AGG | 0.541779 | 8_1:-81308295 | Msa1218670:intron |
| TTCAAGCTGAGAAGGCAGCT+AGG | 0.542356 | 8_1:-81305251 | Msa1218670:CDS |
| ATTGCATCACAATTAACCCT+AGG | 0.545996 | 8_1:+81308057 | None:intergenic |
| TGTGGTGGGTTTCCTTGCTA+CGG | 0.547187 | 8_1:+81308314 | None:intergenic |
| TTCCGATCCTCGCAATGCTA+AGG | 0.547346 | 8_1:-81307875 | Msa1218670:intron |
| CTGAACAATTATGATTATTG+CGG | 0.553988 | 8_1:+81306721 | None:intergenic |
| GCTTAACCAATTTGTCCCCA+TGG | 0.555543 | 8_1:+81307114 | None:intergenic |
| CAGGAAAGAACTATGAGGAT+CGG | 0.556559 | 8_1:-81306848 | Msa1218670:CDS |
| GAATCATTCACATAAAAGAA+AGG | 0.556754 | 8_1:-81307060 | Msa1218670:CDS |
| GTGATGAATCAATATTAGAA+GGG | 0.559877 | 8_1:-81306797 | Msa1218670:CDS |
| GCAGCCATTAAGAAGATACT+TGG | 0.560222 | 8_1:-81305085 | Msa1218670:CDS |
| ACATCGTGGCTGTTTGTGGT+GGG | 0.562752 | 8_1:+81308300 | None:intergenic |
| TCCTGCTAGGAAGAAGAAAG+AGG | 0.563807 | 8_1:-81305056 | Msa1218670:CDS |
| GATTTGGCCAGGAGGATATG+TGG | 0.565880 | 8_1:-81304456 | Msa1218670:three_prime_UTR |
| AGCTGAGAAGGCAGCTAGGG+AGG | 0.566469 | 8_1:-81305247 | Msa1218670:CDS |
| CGATGGACTATGGGTCCCAA+TGG | 0.570559 | 8_1:-81304881 | Msa1218670:CDS |
| GAGAGATGTGCCATGGATGT+GGG | 0.575263 | 8_1:-81306999 | Msa1218670:CDS |
| ATCGCTACACCCCACATCCA+TGG | 0.577901 | 8_1:+81306989 | None:intergenic |
| AAGGACTAACATGCAATCAC+AGG | 0.578464 | 8_1:+81304526 | None:intergenic |
| AGAAGGGAAGAAGCCAAAGA+GGG | 0.585885 | 8_1:-81306781 | Msa1218670:CDS |
| AGTCGCCATAAGGACAATCA+AGG | 0.586794 | 8_1:-81306906 | Msa1218670:CDS |
| TAGCATCAAACACTGTTCGA+TGG | 0.594632 | 8_1:-81304898 | Msa1218670:CDS |
| GTCGCAGTCCCACTGAACTC+CGG | 0.603946 | 8_1:-81308362 | Msa1218670:five_prime_UTR |
| GACTTGTTTGTGATACAAAG+AGG | 0.609154 | 8_1:+81308382 | None:intergenic |
| TGTAACAACCAAGACTGCAA+AGG | 0.609478 | 8_1:+81304572 | None:intergenic |
| ACAATTATGATTATTGCGGG+TGG | 0.613619 | 8_1:+81306725 | None:intergenic |
| TACTTGGTCAAGATCCTGCT+AGG | 0.618102 | 8_1:-81305069 | Msa1218670:CDS |
| AACCGGAAAACACCGTAGCA+AGG | 0.618481 | 8_1:-81308326 | Msa1218670:five_prime_UTR |
| ACTTGTTTGTGATACAAAGA+GGG | 0.621565 | 8_1:+81308383 | None:intergenic |
| GCAAAGGGATGAAATAGCCA+AGG | 0.623359 | 8_1:-81305020 | Msa1218670:intron |
| ATTATTACCTTAGCATTGCG+AGG | 0.624163 | 8_1:+81307868 | None:intergenic |
| TGATGTGCCACGAAAACCTA+GGG | 0.628689 | 8_1:-81308073 | Msa1218670:CDS |
| AAGCCAAAGAGGGAATCTGT+TGG | 0.631087 | 8_1:-81306771 | Msa1218670:CDS |
| TGCATCAGGAAAGAACTATG+AGG | 0.633064 | 8_1:-81306853 | Msa1218670:CDS |
| GTGATGTGCCACGAAAACCT+AGG | 0.636600 | 8_1:-81308074 | Msa1218670:CDS |
| CAAGGAGGCACAACAATGCG+TGG | 0.648200 | 8_1:-81306888 | Msa1218670:CDS |
| ACCTAAAATTAACTGGACAT+GGG | 0.651447 | 8_1:+81304351 | None:intergenic |
| AGGTTTGTGATTTGGCCAGG+AGG | 0.665147 | 8_1:-81304464 | Msa1218670:three_prime_UTR |
| AGTTACTGAGAGATGTGCCA+TGG | 0.668595 | 8_1:-81307006 | Msa1218670:CDS |
| ACAGCTAATCAAGAAAGCTG+AGG | 0.671432 | 8_1:-81305292 | Msa1218670:CDS |
| AGAGATGTGCCATGGATGTG+GGG | 0.675260 | 8_1:-81306998 | Msa1218670:CDS |
| CGCCATAAGGACAATCAAGG+AGG | 0.690105 | 8_1:-81306903 | Msa1218670:CDS |
| AAAGGAAAACCTGGACATCG+TGG | 0.698714 | 8_1:+81308286 | None:intergenic |
| TAACAACCAAGACTGCAAAG+GGG | 0.763481 | 8_1:+81304574 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTGATATTAAATGAAT+TGG | + | chr8_1:81305276-81305295 | None:intergenic | 10.0% |
| !! | ACAATTATTATAGATAAAAT+TGG | - | chr8_1:81306721-81306740 | Msa1218670:CDS | 10.0% |
| !!! | ACTAAAGAAATTTTGATTAA+TGG | - | chr8_1:81304683-81304702 | Msa1218670:intron | 15.0% |
| !!! | GAAAAATATTTTGTGTATAT+AGG | - | chr8_1:81304705-81304724 | Msa1218670:intron | 15.0% |
| !! | AATATTGCAAATTGAAATTA+TGG | - | chr8_1:81305337-81305356 | Msa1218670:intron | 15.0% |
| !! | TATAGTTGCATTATTATATA+TGG | + | chr8_1:81305593-81305612 | None:intergenic | 15.0% |
| !!! | TTTTATCTTGTTTGATTTCA+TGG | + | chr8_1:81304414-81304433 | None:intergenic | 20.0% |
| !! | AAAAATCAACTTACGAAATT+AGG | + | chr8_1:81304639-81304658 | None:intergenic | 20.0% |
| !! | TTCTTTAGTAATTAGTACTA+TGG | + | chr8_1:81304672-81304691 | None:intergenic | 20.0% |
| !! | TTATGAATTAAGTGTATGTT+TGG | - | chr8_1:81305044-81305063 | Msa1218670:CDS | 20.0% |
| !!! | TAGAAAAAAATTGATTCTAG+AGG | - | chr8_1:81305088-81305107 | Msa1218670:CDS | 20.0% |
| !!! | ATTTTTTACGCATTTTTACA+AGG | - | chr8_1:81305201-81305220 | Msa1218670:intron | 20.0% |
| !!! | AATTATGGTTCTTCAATTTT+CGG | - | chr8_1:81305352-81305371 | Msa1218670:intron | 20.0% |
| !! | TACATACCATATAAATTTAG+TGG | - | chr8_1:81305496-81305515 | Msa1218670:intron | 20.0% |
| !! | ACATACCATATAAATTTAGT+GGG | - | chr8_1:81305497-81305516 | Msa1218670:intron | 20.0% |
| !! | TATATTTCCTTCAGATAAAT+TGG | - | chr8_1:81305609-81305628 | Msa1218670:intron | 20.0% |
| !! | AAGCAAATAAAATAAGATCA+AGG | + | chr8_1:81306242-81306261 | None:intergenic | 20.0% |
| !! | ATAAAATTGTGAGATCTATA+AGG | + | chr8_1:81307228-81307247 | None:intergenic | 20.0% |
| !! | TAAAGTTTGTAGTATAACAT+TGG | - | chr8_1:81307656-81307675 | Msa1218670:intron | 20.0% |
| !! | AAAGTTTGTAGTATAACATT+GGG | - | chr8_1:81307657-81307676 | Msa1218670:intron | 20.0% |
| !!! | CTTTAAAGTTGAAACAATAT+AGG | + | chr8_1:81307871-81307890 | None:intergenic | 20.0% |
| !! | AAATGTTTAGAAGAAAATCA+AGG | + | chr8_1:81308101-81308120 | None:intergenic | 20.0% |
| !! | AAATCCAATTACTATTTACA+AGG | + | chr8_1:81308332-81308351 | None:intergenic | 20.0% |
| !!! | ATTTTATATTTTGCAAGACT+TGG | - | chr8_1:81308348-81308367 | Msa1218670:five_prime_UTR | 20.0% |
| ! | GACAGATATAAAATACGAAA+AGG | + | chr8_1:81304571-81304590 | None:intergenic | 25.0% |
| ! | CAATATTTCAGCATTACTTT+GGG | - | chr8_1:81304798-81304817 | Msa1218670:intron | 25.0% |
| ! | AAGAAGCTTAAACTCAAATT+TGG | - | chr8_1:81304905-81304924 | Msa1218670:CDS | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | chr8_1:81305114-81305133 | Msa1218670:intron | 25.0% |
| !!! | GAATTGATTTTGACATGTTT+GGG | - | chr8_1:81305115-81305134 | Msa1218670:intron | 25.0% |
| ! | AACTTTACAGAGTTATACAA+AGG | + | chr8_1:81305416-81305435 | None:intergenic | 25.0% |
| ! | TACACGATTGAAATTCAAAT+GGG | + | chr8_1:81305524-81305543 | None:intergenic | 25.0% |
| ! | ATACACGATTGAAATTCAAA+TGG | + | chr8_1:81305525-81305544 | None:intergenic | 25.0% |
| !! | GATTGAATATTTGAAGTTGA+GGG | + | chr8_1:81305556-81305575 | None:intergenic | 25.0% |
| !! | AGATTGAATATTTGAAGTTG+AGG | + | chr8_1:81305557-81305576 | None:intergenic | 25.0% |
| ! | GTTAATACCAATTTATCTGA+AGG | + | chr8_1:81305619-81305638 | None:intergenic | 25.0% |
| ! | GAATCATTCACATAAAAGAA+AGG | - | chr8_1:81305776-81305795 | Msa1218670:intron | 25.0% |
| ! | AAAATCAATGCATCAAAAAG+AGG | - | chr8_1:81305903-81305922 | Msa1218670:intron | 25.0% |
| ! | AGTGATGAATCAATATTAGA+AGG | - | chr8_1:81306038-81306057 | Msa1218670:intron | 25.0% |
| ! | GTGATGAATCAATATTAGAA+GGG | - | chr8_1:81306039-81306058 | Msa1218670:intron | 25.0% |
| ! | TGAACAATTATGATTATTGC+GGG | + | chr8_1:81306117-81306136 | None:intergenic | 25.0% |
| ! | CTGAACAATTATGATTATTG+CGG | + | chr8_1:81306118-81306137 | None:intergenic | 25.0% |
| !!! | AATCTAACTTTGAGATAATG+TGG | + | chr8_1:81306210-81306229 | None:intergenic | 25.0% |
| !! | TGTATACTCGATTTAACTTA+TGG | + | chr8_1:81306360-81306379 | None:intergenic | 25.0% |
| !! | TCAGTTTCATACAACATTTT+GGG | + | chr8_1:81306592-81306611 | None:intergenic | 25.0% |
| !! | TTCAGTTTCATACAACATTT+TGG | + | chr8_1:81306593-81306612 | None:intergenic | 25.0% |
| !!! | CACTGAATTTATTTTCTTCT+TGG | + | chr8_1:81306633-81306652 | None:intergenic | 25.0% |
| !! | TTTTTAATCACATCTTCTCT+TGG | + | chr8_1:81306700-81306719 | None:intergenic | 25.0% |
| !! | GGTTAGAATATTTTCTTAAG+TGG | - | chr8_1:81306768-81306787 | Msa1218670:CDS | 25.0% |
| !! | GAGAATTTTCTCATAATTAG+AGG | - | chr8_1:81306852-81306871 | Msa1218670:CDS | 25.0% |
| ! | GAGAGATTAAGAAAAACTAT+AGG | - | chr8_1:81306879-81306898 | Msa1218670:CDS | 25.0% |
| !!! | TATCAGTGATTACTTTTACT+TGG | - | chr8_1:81307056-81307075 | Msa1218670:CDS | 25.0% |
| !!! | GTAGTGCATATTACTTTTAA+TGG | - | chr8_1:81307114-81307133 | Msa1218670:CDS | 25.0% |
| ! | TGATCTTAAGAAGAATTACT+CGG | + | chr8_1:81307196-81307215 | None:intergenic | 25.0% |
| ! | CACTTTCAATCAATATTTGA+TGG | + | chr8_1:81307275-81307294 | None:intergenic | 25.0% |
| !!! | ACTTTAAAGTTCTAACATGT+TGG | - | chr8_1:81307882-81307901 | Msa1218670:CDS | 25.0% |
| ! | ATCATCAGAAAAAGTTACTA+CGG | + | chr8_1:81307983-81308002 | None:intergenic | 25.0% |
| !!! | GTAACTTTTTCTGATGATAT+TGG | - | chr8_1:81307985-81308004 | Msa1218670:CDS | 25.0% |
| !! | TTTTAGTACTTGATATGCTT+TGG | - | chr8_1:81308119-81308138 | Msa1218670:intron | 25.0% |
| ! | TAGTCCTTGTAAATAGTAAT+TGG | - | chr8_1:81308325-81308344 | Msa1218670:five_prime_UTR | 25.0% |
| !!! | ATGAGTGAGTTTTGTTGTTA+GGG | + | chr8_1:81304384-81304403 | None:intergenic | 30.0% |
| !!! | TATGAGTGAGTTTTGTTGTT+AGG | + | chr8_1:81304385-81304404 | None:intergenic | 30.0% |
| ACTTGTTTGTGATACAAAGA+GGG | + | chr8_1:81304456-81304475 | None:intergenic | 30.0% | |
| AAAATACGAAAAGGAAAACC+TGG | + | chr8_1:81304562-81304581 | None:intergenic | 30.0% | |
| ! | ACTTCTTTTTCTCTGCATAA+TGG | + | chr8_1:81304744-81304763 | None:intergenic | 30.0% |
| GCAATATTTCAGCATTACTT+TGG | - | chr8_1:81304797-81304816 | Msa1218670:intron | 30.0% | |
| !! | GATACAATTGTTGTTTCTGA+TGG | - | chr8_1:81304860-81304879 | Msa1218670:CDS | 30.0% |
| AAGCTTAAACTCAAATTTGG+AGG | - | chr8_1:81304908-81304927 | Msa1218670:CDS | 30.0% | |
| !! | TTCTAAAGCTTCTCATCTAT+CGG | - | chr8_1:81305639-81305658 | Msa1218670:intron | 30.0% |
| ! | TCTCTTTTTATCATAAGAGC+GGG | + | chr8_1:81305700-81305719 | None:intergenic | 30.0% |
| ! | CTCTCTTTTTATCATAAGAG+CGG | + | chr8_1:81305701-81305720 | None:intergenic | 30.0% |
| TTGATTCATCACTTGATGTA+GGG | + | chr8_1:81306031-81306050 | None:intergenic | 30.0% | |
| ! | ATTGATTCATCACTTGATGT+AGG | + | chr8_1:81306032-81306051 | None:intergenic | 30.0% |
| ! | ACTCGATTTAACTTATGGTA+GGG | + | chr8_1:81306355-81306374 | None:intergenic | 30.0% |
| ! | TACTCGATTTAACTTATGGT+AGG | + | chr8_1:81306356-81306375 | None:intergenic | 30.0% |
| ! | ATTGGTGTAGCTTTTATAGT+AGG | - | chr8_1:81306739-81306758 | Msa1218670:CDS | 30.0% |
| ! | TTGGTGTAGCTTTTATAGTA+GGG | - | chr8_1:81306740-81306759 | Msa1218670:CDS | 30.0% |
| TACCTCTAAATCTCTTCTAA+TGG | + | chr8_1:81306911-81306930 | None:intergenic | 30.0% | |
| AGAAGAGATTTAGAGGTAAA+TGG | - | chr8_1:81306913-81306932 | Msa1218670:CDS | 30.0% | |
| TTGTGTACAACTAATGTAAG+TGG | - | chr8_1:81307248-81307267 | Msa1218670:intron | 30.0% | |
| TGTGTACAACTAATGTAAGT+GGG | - | chr8_1:81307249-81307268 | Msa1218670:intron | 30.0% | |
| ! | TCTAAAACTAAGATGATCAG+AGG | + | chr8_1:81307634-81307653 | None:intergenic | 30.0% |
| TTGACCAAGTATCTTCTTAA+TGG | + | chr8_1:81307758-81307777 | None:intergenic | 30.0% | |
| AGGAAAAGATGAATAAGCAA+AGG | - | chr8_1:81307800-81307819 | Msa1218670:intron | 30.0% | |
| GGAAAAGATGAATAAGCAAA+GGG | - | chr8_1:81307801-81307820 | Msa1218670:intron | 30.0% | |
| AAACAATATAGGAAGAAGGT+TGG | + | chr8_1:81307860-81307879 | None:intergenic | 30.0% | |
| GTTGAAACAATATAGGAAGA+AGG | + | chr8_1:81307864-81307883 | None:intergenic | 30.0% | |
| ! | TATATTTTGCAAGACTTGGA+AGG | - | chr8_1:81308352-81308371 | Msa1218670:five_prime_UTR | 30.0% |
| TTGAGACAAATAGGTCTATT+TGG | + | chr8_1:81308415-81308434 | None:intergenic | 30.0% | |
| GACAAAGAATTGAGACAAAT+AGG | + | chr8_1:81308424-81308443 | None:intergenic | 30.0% | |
| ! | GACTTGTTTGTGATACAAAG+AGG | + | chr8_1:81304457-81304476 | None:intergenic | 35.0% |
| !!! | CCGGTTAAGTTTTGATTTTC+CGG | + | chr8_1:81304496-81304515 | None:intergenic | 35.0% |
| CCGGAAAATCAAAACTTAAC+CGG | - | chr8_1:81304493-81304512 | Msa1218670:three_prime_UTR | 35.0% | |
| ATTGCATCACAATTAACCCT+AGG | + | chr8_1:81304782-81304801 | None:intergenic | 35.0% | |
| ATTATTACCTTAGCATTGCG+AGG | + | chr8_1:81304971-81304990 | None:intergenic | 35.0% | |
| AATGCAAAGTGGTCTATGTT+CGG | + | chr8_1:81305233-81305252 | None:intergenic | 35.0% | |
| ! | AAAGTGAGTTGAATGCAAAG+TGG | + | chr8_1:81305244-81305263 | None:intergenic | 35.0% |
| AATTCATCCAAGTGCATGTT+TGG | + | chr8_1:81305312-81305331 | None:intergenic | 35.0% | |
| GTATTTGCAAGAGCTTCTAT+TGG | - | chr8_1:81305387-81305406 | Msa1218670:intron | 35.0% | |
| TGGTATGTACATGATTTCGT+GGG | + | chr8_1:81305485-81305504 | None:intergenic | 35.0% | |
| ATGGTATGTACATGATTTCG+TGG | + | chr8_1:81305486-81305505 | None:intergenic | 35.0% | |
| TGGGTCCCACTAAATTTATA+TGG | + | chr8_1:81305505-81305524 | None:intergenic | 35.0% | |
| CGCTCTTATGATAAAAAGAG+AGG | - | chr8_1:81305699-81305718 | Msa1218670:intron | 35.0% | |
| TATGATAAAAAGAGAGGCCA+TGG | - | chr8_1:81305705-81305724 | Msa1218670:intron | 35.0% | |
| ATGATAAAAAGAGAGGCCAT+GGG | - | chr8_1:81305706-81305725 | Msa1218670:intron | 35.0% | |
| ACAATTATGATTATTGCGGG+TGG | + | chr8_1:81306114-81306133 | None:intergenic | 35.0% | |
| ATGTCAATAATGCTTGCAAC+TGG | + | chr8_1:81306170-81306189 | None:intergenic | 35.0% | |
| ! | CTCGATTTAACTTATGGTAG+GGG | + | chr8_1:81306354-81306373 | None:intergenic | 35.0% |
| ACAAAGTGCAAGTTTAGCAA+AGG | - | chr8_1:81306377-81306396 | Msa1218670:intron | 35.0% | |
| GGAGATATTAACCTTTGAGT+GGG | - | chr8_1:81306470-81306489 | Msa1218670:intron | 35.0% | |
| ATATTAACCTTTGAGTGGGA+TGG | - | chr8_1:81306474-81306493 | Msa1218670:intron | 35.0% | |
| ! | AGCTTTTATAGTAGGGAACA+TGG | - | chr8_1:81306747-81306766 | Msa1218670:CDS | 35.0% |
| AGCCATTAGAAGAGATTTAG+AGG | - | chr8_1:81306906-81306925 | Msa1218670:CDS | 35.0% | |
| !! | ATATAGGTAGGTTGGTTACA+TGG | + | chr8_1:81306997-81307016 | None:intergenic | 35.0% |
| ATGTAACCAACCTACCTATA+TGG | - | chr8_1:81306996-81307015 | Msa1218670:CDS | 35.0% | |
| ACAACAAGCCATTAACCTAT+AGG | + | chr8_1:81307028-81307047 | None:intergenic | 35.0% | |
| TCATACTGAGTTACGAAACA+AGG | + | chr8_1:81307388-81307407 | None:intergenic | 35.0% | |
| TTGTTTCGTAACTCAGTATG+AGG | - | chr8_1:81307387-81307406 | Msa1218670:intron | 35.0% | |
| GACATTGTATGCATATCTCT+AGG | - | chr8_1:81307458-81307477 | Msa1218670:intron | 35.0% | |
| TAAAAAGAGCAAGTTGTCAG+AGG | - | chr8_1:81307520-81307539 | Msa1218670:intron | 35.0% | |
| ACGAAAAATTCAAGCTGAGA+AGG | - | chr8_1:81307577-81307596 | Msa1218670:intron | 35.0% | |
| CTCTCACATTGTGTTTATGT+AGG | - | chr8_1:81307726-81307745 | Msa1218670:intron | 35.0% | |
| GTGTTTGATGCTAGATTGAA+GGG | + | chr8_1:81307931-81307950 | None:intergenic | 35.0% | |
| AGTGTTTGATGCTAGATTGA+AGG | + | chr8_1:81307932-81307951 | None:intergenic | 35.0% | |
| AAAGTTACTACGGTTCCATT+GGG | + | chr8_1:81307973-81307992 | None:intergenic | 35.0% | |
| AAAAGTTACTACGGTTCCAT+TGG | + | chr8_1:81307974-81307993 | None:intergenic | 35.0% | |
| GACATTGTTTGGAAGATACT+TGG | + | chr8_1:81308015-81308034 | None:intergenic | 35.0% | |
| TCTTCCAAACAATGTCTAAC+AGG | - | chr8_1:81308019-81308038 | Msa1218670:CDS | 35.0% | |
| TGTACCTGTTAGACATTGTT+TGG | + | chr8_1:81308026-81308045 | None:intergenic | 35.0% | |
| TTGTAAGCATTAGTGCAGTT+TGG | + | chr8_1:81308217-81308236 | None:intergenic | 35.0% | |
| GCACTAATGCTTACAAGTAT+CGG | - | chr8_1:81308221-81308240 | Msa1218670:intron | 35.0% | |
| CACTAATGCTTACAAGTATC+GGG | - | chr8_1:81308222-81308241 | Msa1218670:intron | 35.0% | |
| ! | AATTTTTCCACATATCCTCC+TGG | + | chr8_1:81308390-81308409 | None:intergenic | 35.0% |
| ! | TTGATTTTCCGGAGTTCAGT+GGG | + | chr8_1:81304485-81304504 | None:intergenic | 40.0% |
| !! | TTTGATTTTCCGGAGTTCAG+TGG | + | chr8_1:81304486-81304505 | None:intergenic | 40.0% |
| ! | CAATTAACCCTAGGTTTTCG+TGG | + | chr8_1:81304773-81304792 | None:intergenic | 40.0% |
| ! | TATCGGTTATCAATGCATGC+AGG | - | chr8_1:81305656-81305675 | Msa1218670:intron | 40.0% |
| TGATAAAAAGAGAGGCCATG+GGG | - | chr8_1:81305707-81305726 | Msa1218670:intron | 40.0% | |
| GGTGTTTGTAAAGATGCATC+AGG | - | chr8_1:81305969-81305988 | Msa1218670:intron | 40.0% | |
| TGCATCAGGAAAGAACTATG+AGG | - | chr8_1:81305983-81306002 | Msa1218670:intron | 40.0% | |
| CAGGAAAGAACTATGAGGAT+CGG | - | chr8_1:81305988-81306007 | Msa1218670:intron | 40.0% | |
| AGGAAAGAACTATGAGGATC+GGG | - | chr8_1:81305989-81306008 | Msa1218670:intron | 40.0% | |
| AAACCAACAGATTCCCTCTT+TGG | + | chr8_1:81306071-81306090 | None:intergenic | 40.0% | |
| TCTTTCAAAGATGCGCTATC+TGG | - | chr8_1:81306143-81306162 | Msa1218670:intron | 40.0% | |
| CTTTCAAAGATGCGCTATCT+GGG | - | chr8_1:81306144-81306163 | Msa1218670:intron | 40.0% | |
| GCAAGCATTATTGACATCTC+AGG | - | chr8_1:81306173-81306192 | Msa1218670:intron | 40.0% | |
| AGCATTATTGACATCTCAGG+TGG | - | chr8_1:81306176-81306195 | Msa1218670:intron | 40.0% | |
| TATTGACATCTCAGGTGGTT+TGG | - | chr8_1:81306181-81306200 | Msa1218670:intron | 40.0% | |
| ! | GATTTAACTTATGGTAGGGG+CGG | + | chr8_1:81306351-81306370 | None:intergenic | 40.0% |
| AGTCACTTCGTATGGAATCA+AGG | + | chr8_1:81306439-81306458 | None:intergenic | 40.0% | |
| TGATTCCATACGAAGTGACT+AGG | - | chr8_1:81306439-81306458 | Msa1218670:intron | 40.0% | |
| TATCTCCTAGTCACTTCGTA+TGG | + | chr8_1:81306447-81306466 | None:intergenic | 40.0% | |
| GGGAGATATTAACCTTTGAG+TGG | - | chr8_1:81306469-81306488 | Msa1218670:intron | 40.0% | |
| ATTTCATCCATCCCACTCAA+AGG | + | chr8_1:81306484-81306503 | None:intergenic | 40.0% | |
| TTGAGTGGGATGGATGAAAT+AGG | - | chr8_1:81306484-81306503 | Msa1218670:intron | 40.0% | |
| CAGTGTCACAAAGATCTCAA+TGG | - | chr8_1:81306648-81306667 | Msa1218670:intron | 40.0% | |
| CAAAGATCTCAATGGTGCAA+TGG | - | chr8_1:81306656-81306675 | Msa1218670:intron | 40.0% | |
| ! | AGTGGATTTAGCAAGTTACG+AGG | - | chr8_1:81306786-81306805 | Msa1218670:CDS | 40.0% |
| CTGATGAGGAAAATACTAGC+TGG | - | chr8_1:81306830-81306849 | Msa1218670:CDS | 40.0% | |
| AGAGGTAAATGGTCTCATGT+TGG | - | chr8_1:81306924-81306943 | Msa1218670:CDS | 40.0% | |
| TGAGATCCATATAGGTAGGT+TGG | + | chr8_1:81307005-81307024 | None:intergenic | 40.0% | |
| TAGGTGAGATCCATATAGGT+AGG | + | chr8_1:81307009-81307028 | None:intergenic | 40.0% | |
| CCTATAGGTGAGATCCATAT+AGG | + | chr8_1:81307013-81307032 | None:intergenic | 40.0% | |
| CCTATATGGATCTCACCTAT+AGG | - | chr8_1:81307010-81307029 | Msa1218670:CDS | 40.0% | |
| GGATCTCACCTATAGGTTAA+TGG | - | chr8_1:81307017-81307036 | Msa1218670:CDS | 40.0% | |
| ACTGAGTTACGAAACAAGGT+GGG | + | chr8_1:81307384-81307403 | None:intergenic | 40.0% | |
| TACTGAGTTACGAAACAAGG+TGG | + | chr8_1:81307385-81307404 | None:intergenic | 40.0% | |
| ACAGCTAATCAAGAAAGCTG+AGG | - | chr8_1:81307544-81307563 | Msa1218670:intron | 40.0% | |
| GCAGCCATTAAGAAGATACT+TGG | - | chr8_1:81307751-81307770 | Msa1218670:intron | 40.0% | |
| CGTAAACTGTATCAAGACCT+TGG | + | chr8_1:81307836-81307855 | None:intergenic | 40.0% | |
| ! | TTCTAACATGTTGGTTGTGC+AGG | - | chr8_1:81307891-81307910 | Msa1218670:CDS | 40.0% |
| TAGCATCAAACACTGTTCGA+TGG | - | chr8_1:81307938-81307957 | Msa1218670:CDS | 40.0% | |
| !! | AAACACTGTTCGATGGACTA+TGG | - | chr8_1:81307945-81307964 | Msa1218670:CDS | 40.0% |
| !! | AACACTGTTCGATGGACTAT+GGG | - | chr8_1:81307946-81307965 | Msa1218670:CDS | 40.0% |
| TAACAACCAAGACTGCAAAG+GGG | + | chr8_1:81308265-81308284 | None:intergenic | 40.0% | |
| GTAACAACCAAGACTGCAAA+GGG | + | chr8_1:81308266-81308285 | None:intergenic | 40.0% | |
| TGTAACAACCAAGACTGCAA+AGG | + | chr8_1:81308267-81308286 | None:intergenic | 40.0% | |
| AAGGACTAACATGCAATCAC+AGG | + | chr8_1:81308313-81308332 | None:intergenic | 40.0% | |
| GACTTGGAAGGTTTGTGATT+TGG | - | chr8_1:81308364-81308383 | Msa1218670:five_prime_UTR | 40.0% | |
| ! | TTCCTTGCTACGGTGTTTTC+CGG | + | chr8_1:81304515-81304534 | None:intergenic | 45.0% |
| AAAGGAAAACCTGGACATCG+TGG | + | chr8_1:81304553-81304572 | None:intergenic | 45.0% | |
| TGATGTGCCACGAAAACCTA+GGG | - | chr8_1:81304763-81304782 | Msa1218670:intron | 45.0% | |
| TACCTTAGCATTGCGAGGAT+CGG | + | chr8_1:81304966-81304985 | None:intergenic | 45.0% | |
| ! | TGTATGTTTGGTTCCACGTC+TGG | - | chr8_1:81305056-81305075 | Msa1218670:CDS | 45.0% |
| ! | CAAGTGCATGTTTGGTTCAG+TGG | + | chr8_1:81305304-81305323 | None:intergenic | 45.0% |
| CACTGAACCAAACATGCACT+TGG | - | chr8_1:81305302-81305321 | Msa1218670:CDS | 45.0% | |
| GCTTAACCAATTTGTCCCCA+TGG | + | chr8_1:81305725-81305744 | None:intergenic | 45.0% | |
| AGTAACTCGCTTGCTCTTAC+GGG | + | chr8_1:81305817-81305836 | None:intergenic | 45.0% | |
| CAGTAACTCGCTTGCTCTTA+CGG | + | chr8_1:81305818-81305837 | None:intergenic | 45.0% | |
| AGTTACTGAGAGATGTGCCA+TGG | - | chr8_1:81305830-81305849 | Msa1218670:intron | 45.0% | |
| AAGAGGAGTTAGTCGCCATA+AGG | - | chr8_1:81305920-81305939 | Msa1218670:intron | 45.0% | |
| AGTCGCCATAAGGACAATCA+AGG | - | chr8_1:81305930-81305949 | Msa1218670:intron | 45.0% | |
| TGCCTCCTTGATTGTCCTTA+TGG | + | chr8_1:81305938-81305957 | None:intergenic | 45.0% | |
| TAGAAGGGAAGAAGCCAAAG+AGG | - | chr8_1:81306054-81306073 | Msa1218670:intron | 45.0% | |
| AGAAGGGAAGAAGCCAAAGA+GGG | - | chr8_1:81306055-81306074 | Msa1218670:intron | 45.0% | |
| AAGCCAAAGAGGGAATCTGT+TGG | - | chr8_1:81306065-81306084 | Msa1218670:intron | 45.0% | |
| ACGAAGTGACTAGGAGATAG+AGG | - | chr8_1:81306448-81306467 | Msa1218670:intron | 45.0% | |
| CGAAGTGACTAGGAGATAGA+GGG | - | chr8_1:81306449-81306468 | Msa1218670:intron | 45.0% | |
| !! | TCAATGGTGCAATGGACTAG+TGG | - | chr8_1:81306664-81306683 | Msa1218670:CDS | 45.0% |
| !! | CAGCGTTGAGCTGTTTCTAT+AGG | + | chr8_1:81306813-81306832 | None:intergenic | 45.0% |
| GGTCTCATGTTGGACCTAAT+AGG | - | chr8_1:81306934-81306953 | Msa1218670:CDS | 45.0% | |
| CTAATAGGCTCGTGCATGTT+GGG | - | chr8_1:81306949-81306968 | Msa1218670:CDS | 45.0% | |
| CTGAGTTACGAAACAAGGTG+GGG | + | chr8_1:81307383-81307402 | None:intergenic | 45.0% | |
| TACTTGGTCAAGATCCTGCT+AGG | - | chr8_1:81307767-81307786 | Msa1218670:intron | 45.0% | |
| TCCTGCTAGGAAGAAGAAAG+AGG | - | chr8_1:81307780-81307799 | Msa1218670:intron | 45.0% | |
| TCCTCTTTCTTCTTCCTAGC+AGG | + | chr8_1:81307784-81307803 | None:intergenic | 45.0% | |
| GCAAAGGGATGAAATAGCCA+AGG | - | chr8_1:81307816-81307835 | Msa1218670:intron | 45.0% | |
| !!! | TACAAATTTTAAATTAATAA+TGG | - | chr8_1:81307141-81307160 | Msa1218670:CDS | 5.0% |
| AACCGGAAAACACCGTAGCA+AGG | - | chr8_1:81304510-81304529 | Msa1218670:three_prime_UTR | 50.0% | |
| !! | TGTGGTGGGTTTCCTTGCTA+CGG | + | chr8_1:81304525-81304544 | None:intergenic | 50.0% |
| ACATCGTGGCTGTTTGTGGT+GGG | + | chr8_1:81304539-81304558 | None:intergenic | 50.0% | |
| GTGATGTGCCACGAAAACCT+AGG | - | chr8_1:81304762-81304781 | Msa1218670:intron | 50.0% | |
| TTCCGATCCTCGCAATGCTA+AGG | - | chr8_1:81304961-81304980 | Msa1218670:intron | 50.0% | |
| ! | ATGTTTGGTTCCACGTCTGG+TGG | - | chr8_1:81305059-81305078 | Msa1218670:CDS | 50.0% |
| TCTATTGTCTCCACCAGACG+TGG | + | chr8_1:81305072-81305091 | None:intergenic | 50.0% | |
| TGAGAGATGTGCCATGGATG+TGG | - | chr8_1:81305836-81305855 | Msa1218670:intron | 50.0% | |
| GAGAGATGTGCCATGGATGT+GGG | - | chr8_1:81305837-81305856 | Msa1218670:intron | 50.0% | |
| AGAGATGTGCCATGGATGTG+GGG | - | chr8_1:81305838-81305857 | Msa1218670:intron | 50.0% | |
| CGCCATAAGGACAATCAAGG+AGG | - | chr8_1:81305933-81305952 | Msa1218670:intron | 50.0% | |
| TTGCGGGTGGAATGCTTTCT+TGG | + | chr8_1:81306101-81306120 | None:intergenic | 50.0% | |
| GAAACAGCTCAACGCTGATG+AGG | - | chr8_1:81306816-81306835 | Msa1218670:CDS | 50.0% | |
| CCAACATGCACGAGCCTATT+AGG | + | chr8_1:81306951-81306970 | None:intergenic | 50.0% | |
| CCTAATAGGCTCGTGCATGT+TGG | - | chr8_1:81306948-81306967 | Msa1218670:CDS | 50.0% | |
| AGTTACGAAACAAGGTGGGG+AGG | + | chr8_1:81307380-81307399 | None:intergenic | 50.0% | |
| TTCAAGCTGAGAAGGCAGCT+AGG | - | chr8_1:81307585-81307604 | Msa1218670:intron | 50.0% | |
| TCAAGCTGAGAAGGCAGCTA+GGG | - | chr8_1:81307586-81307605 | Msa1218670:intron | 50.0% | |
| GAGGAGTCACGTTCAAACCT+CGG | + | chr8_1:81307615-81307634 | None:intergenic | 50.0% | |
| ! | ACCTGCGCACTTTTCTCTTG+GGG | + | chr8_1:81308194-81308213 | None:intergenic | 50.0% |
| ! | GACCTGCGCACTTTTCTCTT+GGG | + | chr8_1:81308195-81308214 | None:intergenic | 50.0% |
| ! | GCAAAGGGGAAGCTTTGACT+TGG | + | chr8_1:81308251-81308270 | None:intergenic | 50.0% |
| AAGCTTCCCCTTTGCAGTCT+TGG | - | chr8_1:81308256-81308275 | Msa1218670:intron | 50.0% | |
| ! | GGAAGGTTTGTGATTTGGCC+AGG | - | chr8_1:81308369-81308388 | Msa1218670:five_prime_UTR | 50.0% |
| ! | AGGTTTGTGATTTGGCCAGG+AGG | - | chr8_1:81308372-81308391 | Msa1218670:five_prime_UTR | 50.0% |
| GATTTGGCCAGGAGGATATG+TGG | - | chr8_1:81308380-81308399 | Msa1218670:five_prime_UTR | 50.0% | |
| GACATCGTGGCTGTTTGTGG+TGG | + | chr8_1:81304540-81304559 | None:intergenic | 55.0% | |
| CTGGACATCGTGGCTGTTTG+TGG | + | chr8_1:81304543-81304562 | None:intergenic | 55.0% | |
| CACAAACAGCCACGATGTCC+AGG | - | chr8_1:81304541-81304560 | Msa1218670:CDS | 55.0% | |
| GCATTGCGAGGATCGGAAGA+AGG | + | chr8_1:81304959-81304978 | None:intergenic | 55.0% | |
| GAGAGGCCATGGGGACAAAT+TGG | - | chr8_1:81305716-81305735 | Msa1218670:intron | 55.0% | |
| ATCGCTACACCCCACATCCA+TGG | + | chr8_1:81305850-81305869 | None:intergenic | 55.0% | |
| ! | CAAGGAGGCACAACAATGCG+TGG | - | chr8_1:81305948-81305967 | Msa1218670:intron | 55.0% |
| ! | ATGTAATGCGAAGCACCCCC+CGG | - | chr8_1:81307352-81307371 | Msa1218670:intron | 55.0% |
| !! | CGATGGACTATGGGTCCCAA+TGG | - | chr8_1:81307955-81307974 | Msa1218670:CDS | 55.0% |
| ! | CCTGCGCACTTTTCTCTTGG+GGG | + | chr8_1:81308193-81308212 | None:intergenic | 55.0% |
| ! | GGACCTGCGCACTTTTCTCT+TGG | + | chr8_1:81308196-81308215 | None:intergenic | 55.0% |
| GTCGCAGTCCCACTGAACTC+CGG | - | chr8_1:81304474-81304493 | Msa1218670:three_prime_UTR | 60.0% | |
| GCGAGGATCGGAAGAAGGCT+TGG | + | chr8_1:81304954-81304973 | None:intergenic | 60.0% | |
| ! | TGTAATGCGAAGCACCCCCC+GGG | - | chr8_1:81307353-81307372 | Msa1218670:intron | 60.0% |
| AAACAAGGTGGGGAGGACCC+GGG | + | chr8_1:81307373-81307392 | None:intergenic | 60.0% | |
| GAAACAAGGTGGGGAGGACC+CGG | + | chr8_1:81307374-81307393 | None:intergenic | 60.0% | |
| AGCTGAGAAGGCAGCTAGGG+AGG | - | chr8_1:81307589-81307608 | Msa1218670:intron | 60.0% | |
| ! | GCGCACTTTTCTCTTGGGGG+AGG | + | chr8_1:81308190-81308209 | None:intergenic | 60.0% |
| ! | CCCCCAAGAGAAAAGTGCGC+AGG | - | chr8_1:81308190-81308209 | Msa1218670:intron | 60.0% |
| AACAAGGTGGGGAGGACCCG+GGG | + | chr8_1:81307372-81307391 | None:intergenic | 65.0% | |
| ACAAGGTGGGGAGGACCCGG+GGG | + | chr8_1:81307371-81307390 | None:intergenic | 70.0% | |
| GAAGGCAGCTAGGGAGGCCG+AGG | - | chr8_1:81307595-81307614 | Msa1218670:intron | 70.0% | |
| CAAGGTGGGGAGGACCCGGG+GGG | + | chr8_1:81307370-81307389 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 81304360 | 81308498 | 81304360 | ID=Msa1218670;Name=Msa1218670 |
| chr8_1 | mRNA | 81304360 | 81308498 | 81304360 | ID=Msa1218670-mRNA-1;Parent=Msa1218670;Name=Msa1218670-mRNA-1;_AED=0.01;_eAED=0.01;_QI=195|1|1|1|0.83|0.85|7|171|413 |
| chr8_1 | exon | 81304360 | 81304675 | 81304360 | ID=Msa1218670-mRNA-1:exon:28758;Parent=Msa1218670-mRNA-1 |
| chr8_1 | exon | 81304818 | 81304945 | 81304818 | ID=Msa1218670-mRNA-1:exon:28757;Parent=Msa1218670-mRNA-1 |
| chr8_1 | exon | 81305021 | 81305110 | 81305021 | ID=Msa1218670-mRNA-1:exon:28756;Parent=Msa1218670-mRNA-1 |
| chr8_1 | exon | 81305242 | 81305339 | 81305242 | ID=Msa1218670-mRNA-1:exon:28755;Parent=Msa1218670-mRNA-1 |
| chr8_1 | exon | 81306664 | 81307180 | 81306664 | ID=Msa1218670-mRNA-1:exon:28754;Parent=Msa1218670-mRNA-1 |
| chr8_1 | exon | 81307876 | 81308131 | 81307876 | ID=Msa1218670-mRNA-1:exon:28753;Parent=Msa1218670-mRNA-1 |
| chr8_1 | exon | 81308296 | 81308498 | 81308296 | ID=Msa1218670-mRNA-1:exon:28752;Parent=Msa1218670-mRNA-1 |
| chr8_1 | five_prime_UTR | 81308304 | 81308498 | 81308304 | ID=Msa1218670-mRNA-1:five_prime_utr;Parent=Msa1218670-mRNA-1 |
| chr8_1 | CDS | 81308296 | 81308303 | 81308296 | ID=Msa1218670-mRNA-1:cds;Parent=Msa1218670-mRNA-1 |
| chr8_1 | CDS | 81307876 | 81308131 | 81307876 | ID=Msa1218670-mRNA-1:cds;Parent=Msa1218670-mRNA-1 |
| chr8_1 | CDS | 81306664 | 81307180 | 81306664 | ID=Msa1218670-mRNA-1:cds;Parent=Msa1218670-mRNA-1 |
| chr8_1 | CDS | 81305242 | 81305339 | 81305242 | ID=Msa1218670-mRNA-1:cds;Parent=Msa1218670-mRNA-1 |
| chr8_1 | CDS | 81305021 | 81305110 | 81305021 | ID=Msa1218670-mRNA-1:cds;Parent=Msa1218670-mRNA-1 |
| chr8_1 | CDS | 81304818 | 81304945 | 81304818 | ID=Msa1218670-mRNA-1:cds;Parent=Msa1218670-mRNA-1 |
| chr8_1 | CDS | 81304531 | 81304675 | 81304531 | ID=Msa1218670-mRNA-1:cds;Parent=Msa1218670-mRNA-1 |
| chr8_1 | three_prime_UTR | 81304360 | 81304530 | 81304360 | ID=Msa1218670-mRNA-1:three_prime_utr;Parent=Msa1218670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
