AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0783340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0783340 MtrunA17_Chr5g0438591 94.444 360 14 2 1 357 1 357 0.0 690
Msa0783340 MtrunA17_Chr5g0444931 55.556 288 128 0 65 352 36 323 1.90e-124 360
Msa0783340 MtrunA17_Chr1g0162061 55.208 288 129 0 65 352 48 335 1.26e-122 356
Msa0783340 MtrunA17_Chr5g0444941 52.381 63 30 0 70 132 16 78 3.03e-19 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0783340 AT2G04530.1 68.079 354 106 2 11 357 1 354 0.0 523
Msa0783340 AT1G74700.1 58.633 278 115 0 75 352 3 280 1.44e-124 360

Find 87 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAATAACCTGACCCTTTA+AGG 0.059468 5_2:-67259287 None:intergenic
ACAATGATTTAGACCTAAAT+AGG 0.216099 5_2:+67264867 Msa0783340:three_prime_UTR
GTCATGTTACCTCAGATATA+TGG 0.248785 5_2:-67263778 None:intergenic
TATCTAAATTTAGATGAATT+TGG 0.257410 5_2:+67264838 Msa0783340:three_prime_UTR
ATCGATTGCTTTGCTTATTT+CGG 0.257437 5_2:-67259310 None:intergenic
TTAGGTCTAAATCATTGTTT+TGG 0.287050 5_2:-67264862 None:intergenic
CATGTCGTTAATTCCCTTAA+AGG 0.290485 5_2:+67259273 Msa0783340:CDS
TCTCAATTTGTTTCCCGTTC+AGG 0.297798 5_2:-67263105 None:intergenic
TCTAGGTGCTCATTGATATA+CGG 0.320576 5_2:-67264705 None:intergenic
TGCAATGAAACTTGTTGTTT+TGG 0.331098 5_2:-67259246 None:intergenic
ATTATAACAGGCAACTTTCC+TGG 0.339842 5_2:+67263712 Msa0783340:intron
AGAAAATTGGTTGGTGAAAT+GGG 0.360350 5_2:-67259221 None:intergenic
GAGAAAATTGGTTGGTGAAA+TGG 0.365989 5_2:-67259222 None:intergenic
TCTCCTGAGGTAGCCTTCAC+TGG 0.374275 5_2:+67263240 Msa0783340:CDS
GCTCATTGATATACGGATAA+TGG 0.383704 5_2:-67264698 None:intergenic
AAATTGTGAATTGGTTGCTT+TGG 0.386759 5_2:+67262251 Msa0783340:CDS
CTCAATGCATCGGCATTAAG+TGG 0.394913 5_2:-67263291 None:intergenic
ATGTCGTTAATTCCCTTAAA+GGG 0.405137 5_2:+67259274 Msa0783340:CDS
AACAATACAGTCACCTGAAC+GGG 0.409727 5_2:+67263092 Msa0783340:CDS
AGTTGAACTAAATTGTGAAT+TGG 0.422079 5_2:+67262242 Msa0783340:CDS
TCAATTGAAGGAGTTTCAAT+TGG 0.426010 5_2:+67259399 Msa0783340:CDS
GTTAATTCCCTTAAAGGGTC+AGG 0.426756 5_2:+67259279 Msa0783340:CDS
GTTATATAGTCTACTCAATC+AGG 0.431968 5_2:+67263056 Msa0783340:CDS
ACAGGTTCAACGTAAAGGTT+TGG 0.435983 5_2:+67259362 Msa0783340:CDS
AATGATGATGGTTGTGTTGT+GGG 0.444796 5_2:-67259083 None:intergenic
TAAATAACCTGACCCTTTAA+GGG 0.445395 5_2:-67259286 None:intergenic
GGAGGGCTGCCAATGTATAT+AGG 0.451399 5_2:+67262117 Msa0783340:CDS
CTCCTGAGGTAGCCTTCACT+GGG 0.453856 5_2:+67263241 Msa0783340:CDS
TTTGCATTTGCATAGTGAAA+TGG 0.455144 5_2:-67259167 None:intergenic
TTGGAAGGATATTCAATTGA+AGG 0.462678 5_2:+67259387 Msa0783340:CDS
ATTGAAGGAGTTTCAATTGG+TGG 0.465522 5_2:+67259402 Msa0783340:CDS
TTCATCAAGATACAATATAG+AGG 0.465852 5_2:+67264179 Msa0783340:CDS
GATTTGAAGCCTTCTGTAAG+TGG 0.478640 5_2:-67264637 None:intergenic
GTCCAAGACTTCAGCAAAAG+TGG 0.482390 5_2:+67264612 Msa0783340:CDS
CTTGACGTTCACAAGACATT+GGG 0.483347 5_2:+67262216 Msa0783340:CDS
TCATGTTACCTCAGATATAT+GGG 0.483425 5_2:-67263777 None:intergenic
ACTGGTTACATTCTTTCTCT+AGG 0.487663 5_2:-67264722 None:intergenic
TCAAATATTGATACCTGGCT+TGG 0.488765 5_2:-67262415 None:intergenic
AAATCACAGGTTCAACGTAA+AGG 0.491384 5_2:+67259357 Msa0783340:CDS
TCAACATCGTCTTTGATGCA+TGG 0.500196 5_2:-67262186 None:intergenic
CAGGGGAGACATATGAAATA+CGG 0.510868 5_2:+67262350 Msa0783340:intron
TCAACGTAAAGGTTTGGACT+TGG 0.516194 5_2:+67259368 Msa0783340:CDS
GAATGATGATGGTTGTGTTG+TGG 0.520830 5_2:-67259084 None:intergenic
GTGAAGTGGAAGAGACATCA+TGG 0.533863 5_2:-67259145 None:intergenic
GCTTGACGTTCACAAGACAT+TGG 0.542921 5_2:+67262215 Msa0783340:CDS
TCCCCAGTGAAGGCTACCTC+AGG 0.543025 5_2:-67263243 None:intergenic
GAATTGGTTGCTTTGGATGT+CGG 0.545527 5_2:+67262258 Msa0783340:CDS
TGGAAGAGACATCATGGAAA+GGG 0.545693 5_2:-67259139 None:intergenic
CGTAAAGGTTTGGACTTGGA+AGG 0.546281 5_2:+67259372 Msa0783340:CDS
ATGATGATGGTTGTGTTGTG+GGG 0.559393 5_2:-67259082 None:intergenic
ATTCTGATGAATAGCTCTAG+TGG 0.559629 5_2:-67259484 None:intergenic
CTACTGTGGTTGAATCATCC+AGG 0.560207 5_2:-67263730 None:intergenic
TGTCTTTGAAGGAATGATGA+TGG 0.561988 5_2:-67259095 None:intergenic
TCATGGAAAGGGTTTAGAGT+GGG 0.564551 5_2:-67259128 None:intergenic
ACAACATGTTATACCAAGCC+AGG 0.564907 5_2:+67262402 Msa0783340:CDS
ATTCACAATTTAGTTCAACT+TGG 0.565102 5_2:-67262239 None:intergenic
TTCTGATGAATAGCTCTAGT+GGG 0.572017 5_2:-67259483 None:intergenic
TTGAAAGGGGAATTTGTGAG+AGG 0.573247 5_2:-67259192 None:intergenic
TCAAAAGCACATTTAAACTC+AGG 0.574634 5_2:-67259447 None:intergenic
CTTCAAATCACAGTACACAT+AGG 0.575742 5_2:+67264651 Msa0783340:CDS
GATGCATGGAGGTACAAATA+CGG 0.589618 5_2:-67262172 None:intergenic
ATAACATGTTGTGTTCTGAA+TGG 0.593217 5_2:-67262391 None:intergenic
CTTTAAGGGAATTAACGACA+TGG 0.593784 5_2:-67259272 None:intergenic
CCACGACTTCCTATATACAT+TGG 0.595400 5_2:-67262126 None:intergenic
GTGGAAGAGACATCATGGAA+AGG 0.596261 5_2:-67259140 None:intergenic
AAAGTGGTTCCACTTACAGA+AGG 0.615621 5_2:+67264628 Msa0783340:CDS
AAACAATACAGTCACCTGAA+CGG 0.618544 5_2:+67263091 Msa0783340:CDS
TGATGTTGTATCCCCAGTGA+AGG 0.625436 5_2:-67263253 None:intergenic
GTACCGTGTTGCAAAATCAC+AGG 0.625905 5_2:+67259344 Msa0783340:CDS
TTTAAGGGAATTAACGACAT+GGG 0.631013 5_2:-67259271 None:intergenic
CATGGAGGTACAAATACGGT+GGG 0.631343 5_2:-67262168 None:intergenic
ATCATGGAAAGGGTTTAGAG+TGG 0.634394 5_2:-67259129 None:intergenic
TTCTGAATGGTCGAACAACA+AGG 0.634897 5_2:-67262378 None:intergenic
TCAATGCATCGGCATTAAGT+GGG 0.635067 5_2:-67263290 None:intergenic
TGCATAGTGAAATGGTGAAG+TGG 0.643427 5_2:-67259159 None:intergenic
GGAGGTACAAATACGGTGGG+AGG 0.644079 5_2:-67262165 None:intergenic
CCAATGTATATAGGAAGTCG+TGG 0.651899 5_2:+67262126 Msa0783340:CDS
GCATGGAGGTACAAATACGG+TGG 0.660563 5_2:-67262169 None:intergenic
TGGTCATACCCATATATCTG+AGG 0.662316 5_2:+67263769 Msa0783340:CDS
ATATATGGGTATGACCATGT+TGG 0.662736 5_2:-67263763 None:intergenic
AGCAAAAGTTCTTATAACCG+AGG 0.665868 5_2:+67263314 Msa0783340:CDS
GTAGAGCATGCACGCCAACA+TGG 0.668020 5_2:+67263749 Msa0783340:CDS
TTGGCGTGCATGCTCTACTG+TGG 0.686614 5_2:-67263744 None:intergenic
AGCTCATTGAAAATGCTCAG+TGG 0.703675 5_2:+67264124 Msa0783340:intron
AGACACTATATTATCTCCTG+AGG 0.717343 5_2:+67263227 Msa0783340:CDS
ACATCGTCTTTGATGCATGG+AGG 0.734178 5_2:-67262183 None:intergenic
TCCTGAGGTAGCCTTCACTG+GGG 0.776935 5_2:+67263242 Msa0783340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTAACTTTATTATAATT+GGG + chr5_2:67261290-67261309 Msa0783340:intron 10.0%
!! AAATTCATAATACATTATTA+TGG + chr5_2:67261777-67261796 Msa0783340:intron 10.0%
!!! AAAACTATTTTTTTTCTTTC+TGG + chr5_2:67259937-67259956 Msa0783340:intron 15.0%
!!! AAACTATTTTTTTTCTTTCT+GGG + chr5_2:67259938-67259957 Msa0783340:intron 15.0%
!! GAAGTTAACTTTATTATAAT+TGG + chr5_2:67261289-67261308 Msa0783340:intron 15.0%
!! TAGAGAAAAATATCATTTAT+TGG + chr5_2:67261587-67261606 Msa0783340:intron 15.0%
!!! AATTTTTTTCAACTATAAAC+AGG - chr5_2:67261841-67261860 None:intergenic 15.0%
!! GAAAAAAATTTAACATTGAT+AGG + chr5_2:67261851-67261870 Msa0783340:intron 15.0%
!!! TTAAATTTAAGTTGTGTATT+TGG + chr5_2:67262624-67262643 Msa0783340:intron 15.0%
!! AACTATAATGTAAAAACTTT+AGG - chr5_2:67263955-67263974 None:intergenic 15.0%
!! TATCTAAATTTAGATGAATT+TGG + chr5_2:67264838-67264857 Msa0783340:three_prime_UTR 15.0%
!!! TTTAAATGTGCTTTTGATAT+TGG + chr5_2:67259453-67259472 Msa0783340:CDS 20.0%
!! ATCACAAATGAAAACATTAT+TGG - chr5_2:67259577-67259596 None:intergenic 20.0%
!!! CCAAAAAAAGATTACAATTT+TGG - chr5_2:67260033-67260052 None:intergenic 20.0%
!!! CCAAAATTGTAATCTTTTTT+TGG + chr5_2:67260030-67260049 Msa0783340:intron 20.0%
!!! ATCCATCATCATTTTTTTTT+TGG + chr5_2:67260440-67260459 Msa0783340:intron 20.0%
!! TACCAAAAAAAAAATGATGA+TGG - chr5_2:67260445-67260464 None:intergenic 20.0%
!! TTTGAAAATTACATTAGAGT+AGG - chr5_2:67260547-67260566 None:intergenic 20.0%
!!! GATTTAAATCAATTTTCCTT+TGG + chr5_2:67260833-67260852 Msa0783340:intron 20.0%
!! CAACAACATAAAAAATTGTT+CGG - chr5_2:67261152-67261171 None:intergenic 20.0%
!!! ATTATAATTGGGTTAGTATT+AGG + chr5_2:67261301-67261320 Msa0783340:intron 20.0%
!!! TTATAATTGGGTTAGTATTA+GGG + chr5_2:67261302-67261321 Msa0783340:intron 20.0%
!!! AATATGTTTTTGATAAAGCA+GGG - chr5_2:67261348-67261367 None:intergenic 20.0%
!!! AAATATGTTTTTGATAAAGC+AGG - chr5_2:67261349-67261368 None:intergenic 20.0%
!!! ATTTTGACTTAGATGAATAA+AGG + chr5_2:67261454-67261473 Msa0783340:intron 20.0%
!! AATTTGAAAACTGAAAAGAA+AGG - chr5_2:67261915-67261934 None:intergenic 20.0%
!!! ATGATGATTTTGAATGATTT+AGG + chr5_2:67262095-67262114 Msa0783340:intron 20.0%
!!! TGATGATTTTGAATGATTTA+GGG + chr5_2:67262096-67262115 Msa0783340:intron 20.0%
!!! ATTTGTCAATTTTCATTTCA+GGG + chr5_2:67262332-67262351 Msa0783340:intron 20.0%
!!! AACACAATCTTTTAATAGAA+TGG + chr5_2:67263340-67263359 Msa0783340:intron 20.0%
!!! TTTCTTAACATCTATTTCTA+TGG - chr5_2:67263423-67263442 None:intergenic 20.0%
!! ATTGTTGAAACTATTATAAC+AGG + chr5_2:67263700-67263719 Msa0783340:intron 20.0%
!! TATAATGTAAAAACTTTAGG+TGG - chr5_2:67263952-67263971 None:intergenic 20.0%
!!! TAACATTCTTTTTCATAAAC+TGG - chr5_2:67264743-67264762 None:intergenic 20.0%
!!! AAATGGGAAAATTTTGAAAG+GGG - chr5_2:67259208-67259227 None:intergenic 25.0%
!!! GAAATGGGAAAATTTTGAAA+GGG - chr5_2:67259209-67259228 None:intergenic 25.0%
!! TGAAATGGGAAAATTTTGAA+AGG - chr5_2:67259210-67259229 None:intergenic 25.0%
!!! AAGTTTAATTTCCCAACTTT+TGG + chr5_2:67259545-67259564 Msa0783340:intron 25.0%
! ACAAATGAAAACATTATTGG+TGG - chr5_2:67259574-67259593 None:intergenic 25.0%
!!! TGTTTGTGCTTTATTTTTTC+AGG + chr5_2:67259678-67259697 Msa0783340:intron 25.0%
! TATTGAATAACTGTTGTATC+TGG + chr5_2:67259703-67259722 Msa0783340:intron 25.0%
! TTGTACTAATTCACATATCA+AGG - chr5_2:67259856-67259875 None:intergenic 25.0%
! ATAATGAAAAGAAAGGAAGA+GGG - chr5_2:67260242-67260261 None:intergenic 25.0%
! AATAATGAAAAGAAAGGAAG+AGG - chr5_2:67260243-67260262 None:intergenic 25.0%
! GAGAGTAATAATGAAAAGAA+AGG - chr5_2:67260249-67260268 None:intergenic 25.0%
!! TTTTCTCTCTAGTATATCTT+GGG + chr5_2:67260399-67260418 Msa0783340:intron 25.0%
! AGAATGTTTGACAAATCAAA+TGG + chr5_2:67260502-67260521 Msa0783340:intron 25.0%
! CTGAAAATCCATTTATTGTT+TGG + chr5_2:67260656-67260675 Msa0783340:intron 25.0%
!!! TCAAGTTGGTATTCATTTAT+TGG + chr5_2:67260742-67260761 Msa0783340:intron 25.0%
! TCACCATAAAGATTAATCTA+AGG + chr5_2:67260931-67260950 Msa0783340:intron 25.0%
! CACCATAAAGATTAATCTAA+GGG + chr5_2:67260932-67260951 Msa0783340:intron 25.0%
! TACATATAACATGTACTAGT+AGG + chr5_2:67261105-67261124 Msa0783340:intron 25.0%
! ACATATAACATGTACTAGTA+GGG + chr5_2:67261106-67261125 Msa0783340:intron 25.0%
!!! TATAATTGGGTTAGTATTAG+GGG + chr5_2:67261303-67261322 Msa0783340:intron 25.0%
! AGAGTGAAAAAATTAAGTCT+TGG + chr5_2:67261374-67261393 Msa0783340:intron 25.0%
! TAATCAACATAGAGATAGTT+TGG - chr5_2:67261647-67261666 None:intergenic 25.0%
! TAATACATTATTATGGAGCT+TGG + chr5_2:67261784-67261803 Msa0783340:intron 25.0%
!! ATTCACAATTTAGTTCAACT+TGG - chr5_2:67262242-67262261 None:intergenic 25.0%
! AGTTGAACTAAATTGTGAAT+TGG + chr5_2:67262242-67262261 Msa0783340:CDS 25.0%
!! GATTTGTCAATTTTCATTTC+AGG + chr5_2:67262331-67262350 Msa0783340:intron 25.0%
!! TTTGTCAATTTTCATTTCAG+GGG + chr5_2:67262333-67262352 Msa0783340:intron 25.0%
! TATGTTCAAATATTGATACC+TGG - chr5_2:67262423-67262442 None:intergenic 25.0%
! AAAAACAAGCATATGTTTCA+TGG - chr5_2:67262594-67262613 None:intergenic 25.0%
! TTCTAATTTATAACCACCAT+AGG + chr5_2:67262882-67262901 Msa0783340:intron 25.0%
! ATTGAGAAACTAAAAAAGTC+AGG + chr5_2:67263121-67263140 Msa0783340:CDS 25.0%
!! GTTTTCTATAACTTCTTACA+TGG - chr5_2:67263478-67263497 None:intergenic 25.0%
!! TTTAACATTTTCTCTCAAGT+TGG + chr5_2:67263542-67263561 Msa0783340:intron 25.0%
! AAACAATGATAGAAATAGAG+AGG - chr5_2:67263670-67263689 None:intergenic 25.0%
!!! TGACGTCTTTCATTATTTTA+TGG + chr5_2:67263797-67263816 Msa0783340:intron 25.0%
!!! CTAGGTTTTTTATCTTGAAA+TGG - chr5_2:67264043-67264062 None:intergenic 25.0%
! TTAAACATGTTTACAACATC+AGG - chr5_2:67264098-67264117 None:intergenic 25.0%
! TTCATCAAGATACAATATAG+AGG + chr5_2:67264179-67264198 Msa0783340:CDS 25.0%
! CTATTTAGATGTAAAACTCT+TGG + chr5_2:67264274-67264293 Msa0783340:intron 25.0%
! TGCAAAATGCAAAATTAATG+CGG - chr5_2:67264506-67264525 None:intergenic 25.0%
!! TTAGGTCTAAATCATTGTTT+TGG - chr5_2:67264865-67264884 None:intergenic 25.0%
TTTGCATTTGCATAGTGAAA+TGG - chr5_2:67259170-67259189 None:intergenic 30.0%
!! AGAAAATTGGTTGGTGAAAT+GGG - chr5_2:67259224-67259243 None:intergenic 30.0%
!!! TGTTGTTTTGGAGAGAAAAT+TGG - chr5_2:67259237-67259256 None:intergenic 30.0%
!!! TGCAATGAAACTTGTTGTTT+TGG - chr5_2:67259249-67259268 None:intergenic 30.0%
TTTAAGGGAATTAACGACAT+GGG - chr5_2:67259274-67259293 None:intergenic 30.0%
ATGTCGTTAATTCCCTTAAA+GGG + chr5_2:67259274-67259293 Msa0783340:CDS 30.0%
TAAATAACCTGACCCTTTAA+GGG - chr5_2:67259289-67259308 None:intergenic 30.0%
ATAAATAACCTGACCCTTTA+AGG - chr5_2:67259290-67259309 None:intergenic 30.0%
ATCGATTGCTTTGCTTATTT+CGG - chr5_2:67259313-67259332 None:intergenic 30.0%
TTGGAAGGATATTCAATTGA+AGG + chr5_2:67259387-67259406 Msa0783340:CDS 30.0%
TCAATTGAAGGAGTTTCAAT+TGG + chr5_2:67259399-67259418 Msa0783340:CDS 30.0%
! TCAAAAGCACATTTAAACTC+AGG - chr5_2:67259450-67259469 None:intergenic 30.0%
!! TACAAAGTGTTGTCAAATAG+CGG + chr5_2:67259871-67259890 Msa0783340:intron 30.0%
AAATTAGTCACTGAAGAAAC+TGG - chr5_2:67260340-67260359 None:intergenic 30.0%
ATATACTAGAGAGAAAACGA+AGG - chr5_2:67260396-67260415 None:intergenic 30.0%
! GTTTTCTCTCTAGTATATCT+TGG + chr5_2:67260398-67260417 Msa0783340:intron 30.0%
!! TGATGATGGATATTCAAAAC+TGG - chr5_2:67260431-67260450 None:intergenic 30.0%
ATCCATCATCATAAAACAGT+TGG + chr5_2:67260470-67260489 Msa0783340:intron 30.0%
! AACCAACTGTTTTATGATGA+TGG - chr5_2:67260475-67260494 None:intergenic 30.0%
! ATGGATTTTCAGTTGTCTTT+TGG - chr5_2:67260648-67260667 None:intergenic 30.0%
TGAGAAAGCCAAACAATAAA+TGG - chr5_2:67260667-67260686 None:intergenic 30.0%
CCAACTTGATTGAAAATTCA+TGG - chr5_2:67260731-67260750 None:intergenic 30.0%
! CCATGAATTTTCAATCAAGT+TGG + chr5_2:67260728-67260747 Msa0783340:intron 30.0%
CGCTTTAATCAAACAATGAA+TGG - chr5_2:67260783-67260802 None:intergenic 30.0%
TTTATGGTGATACTTAAGTC+TGG - chr5_2:67260921-67260940 None:intergenic 30.0%
GTTTAATATGAGAGATGAGA+GGG - chr5_2:67260969-67260988 None:intergenic 30.0%
TGTTTAATATGAGAGATGAG+AGG - chr5_2:67260970-67260989 None:intergenic 30.0%
!!! ACTAGTAGGGTTTTAAACAA+AGG + chr5_2:67261119-67261138 Msa0783340:intron 30.0%
TTGACTTAGATGAATAAAGG+AGG + chr5_2:67261457-67261476 Msa0783340:intron 30.0%
TGACTTAGATGAATAAAGGA+GGG + chr5_2:67261458-67261477 Msa0783340:intron 30.0%
!! TAGAGGTTCTGAAGAAATTA+AGG + chr5_2:67261528-67261547 Msa0783340:intron 30.0%
ATACATTGTAGGTCTACTAT+AGG - chr5_2:67261694-67261713 None:intergenic 30.0%
GTAACTTTCTACTAGAACAA+AGG + chr5_2:67261815-67261834 Msa0783340:intron 30.0%
TATCATATCATGTACAACTC+AGG + chr5_2:67261875-67261894 Msa0783340:intron 30.0%
AACGTTTACAACAATACACA+TGG - chr5_2:67261944-67261963 None:intergenic 30.0%
! TGATTTTGAATGATTTAGGG+AGG + chr5_2:67262099-67262118 Msa0783340:intron 30.0%
! GATTTTGAATGATTTAGGGA+GGG + chr5_2:67262100-67262119 Msa0783340:intron 30.0%
AAATTGTGAATTGGTTGCTT+TGG + chr5_2:67262251-67262270 Msa0783340:CDS 30.0%
! ATAACATGTTGTGTTCTGAA+TGG - chr5_2:67262394-67262413 None:intergenic 30.0%
! GCATTTTCAAACAAAGTTCA+TGG + chr5_2:67262458-67262477 Msa0783340:intron 30.0%
! CTAAAACCTATTTTCCGTTT+GGG + chr5_2:67262750-67262769 Msa0783340:intron 30.0%
CATGAGAAATGGTAAAACTT+TGG + chr5_2:67262782-67262801 Msa0783340:intron 30.0%
ACAATGGATATGTTGTCAAA+TGG + chr5_2:67262843-67262862 Msa0783340:intron 30.0%
CAATGGATATGTTGTCAAAT+GGG + chr5_2:67262844-67262863 Msa0783340:intron 30.0%
GTTATATAGTCTACTCAATC+AGG + chr5_2:67263056-67263075 Msa0783340:CDS 30.0%
TAAAAGATTGTGTTGTACCT+CGG - chr5_2:67263334-67263353 None:intergenic 30.0%
AGATGTTAAGAAATCAAGCA+TGG + chr5_2:67263430-67263449 Msa0783340:intron 30.0%
GATGTTAAGAAATCAAGCAT+GGG + chr5_2:67263431-67263450 Msa0783340:intron 30.0%
ATGTTAAGAAATCAAGCATG+GGG + chr5_2:67263432-67263451 Msa0783340:intron 30.0%
GTGAAATGAGAAAAACTTGA+AGG - chr5_2:67263503-67263522 None:intergenic 30.0%
GATAGAAATAGAGAGGAATA+GGG - chr5_2:67263663-67263682 None:intergenic 30.0%
TGATAGAAATAGAGAGGAAT+AGG - chr5_2:67263664-67263683 None:intergenic 30.0%
TCATGTTACCTCAGATATAT+GGG - chr5_2:67263780-67263799 None:intergenic 30.0%
CAACTTTGTAGACAAAATCA+AGG + chr5_2:67263820-67263839 Msa0783340:intron 30.0%
TTTAGATGTAAAACTCTTGG+CGG + chr5_2:67264277-67264296 Msa0783340:intron 30.0%
TTGTTCAAAATAGTGCATTG+CGG - chr5_2:67264387-67264406 None:intergenic 30.0%
GTTCAAATTCTGCTATACTA+TGG - chr5_2:67264425-67264444 None:intergenic 30.0%
AAAATAAGCACTTTAACTGC+AGG + chr5_2:67264561-67264580 Msa0783340:intron 30.0%
! TGTCTTTGAAGGAATGATGA+TGG - chr5_2:67259098-67259117 None:intergenic 35.0%
!! GAGAAAATTGGTTGGTGAAA+TGG - chr5_2:67259225-67259244 None:intergenic 35.0%
!!! GTTTTGGAGAGAAAATTGGT+TGG - chr5_2:67259233-67259252 None:intergenic 35.0%
! CTTTAAGGGAATTAACGACA+TGG - chr5_2:67259275-67259294 None:intergenic 35.0%
CATGTCGTTAATTCCCTTAA+AGG + chr5_2:67259273-67259292 Msa0783340:CDS 35.0%
AAATCACAGGTTCAACGTAA+AGG + chr5_2:67259357-67259376 Msa0783340:CDS 35.0%
ATTGAAGGAGTTTCAATTGG+TGG + chr5_2:67259402-67259421 Msa0783340:CDS 35.0%
!! TTCTGATGAATAGCTCTAGT+GGG - chr5_2:67259486-67259505 None:intergenic 35.0%
!! ATTCTGATGAATAGCTCTAG+TGG - chr5_2:67259487-67259506 None:intergenic 35.0%
! ATTGGTGGTTACCAAAAGTT+GGG - chr5_2:67259559-67259578 None:intergenic 35.0%
! TATTGGTGGTTACCAAAAGT+TGG - chr5_2:67259560-67259579 None:intergenic 35.0%
! TCGCTTATATTTGAGACTAG+AGG + chr5_2:67259772-67259791 Msa0783340:intron 35.0%
! CGCTTATATTTGAGACTAGA+GGG + chr5_2:67259773-67259792 Msa0783340:intron 35.0%
GTATTGTCAAATAGAGTAGC+AGG + chr5_2:67259804-67259823 Msa0783340:intron 35.0%
GTTATAGCATTGTAGCATAG+AGG + chr5_2:67259904-67259923 Msa0783340:intron 35.0%
GACAATATTGATCCACATCA+TGG + chr5_2:67259978-67259997 Msa0783340:intron 35.0%
!! TGAGAGATGAGAGCATTTAA+TGG + chr5_2:67260121-67260140 Msa0783340:intron 35.0%
CGCATAGATGAGAAATAAAG+AGG - chr5_2:67260205-67260224 None:intergenic 35.0%
TGAAGAAACTGGATCTACAA+TGG - chr5_2:67260329-67260348 None:intergenic 35.0%
AAGAAACGTGAAGATGAAGA+GGG - chr5_2:67260588-67260607 None:intergenic 35.0%
AAAATCCATGTCTGCAAAAC+TGG - chr5_2:67260616-67260635 None:intergenic 35.0%
! TTTTCGTTCTTAGTTGCCAA+AGG - chr5_2:67260852-67260871 None:intergenic 35.0%
GGCCCTTAGATTAATCTTTA+TGG - chr5_2:67260937-67260956 None:intergenic 35.0%
AACACTCCTCTCATTTGATA+TGG + chr5_2:67260986-67261005 Msa0783340:intron 35.0%
!!! ACACTTTTGGATTAGTGTGA+AGG + chr5_2:67261070-67261089 Msa0783340:intron 35.0%
!!! CACTTTTGGATTAGTGTGAA+GGG + chr5_2:67261071-67261090 Msa0783340:intron 35.0%
ATTATTGATGAAAACTCGCG+TGG + chr5_2:67261663-67261682 Msa0783340:intron 35.0%
TAGCAGGATTCATACATTGT+AGG - chr5_2:67261705-67261724 None:intergenic 35.0%
! TGTCATTTGTCTTTCTTTCG+TGG + chr5_2:67262285-67262304 Msa0783340:intron 35.0%
TCAAATATTGATACCTGGCT+TGG - chr5_2:67262418-67262437 None:intergenic 35.0%
! GAAATTTCATCCTCGTGTTT+TGG + chr5_2:67262568-67262587 Msa0783340:intron 35.0%
!!! AACGGAAAATAGGTTTTAGG+AGG - chr5_2:67262749-67262768 None:intergenic 35.0%
! CCAAACGGAAAATAGGTTTT+AGG - chr5_2:67262752-67262771 None:intergenic 35.0%
! CCTAAAACCTATTTTCCGTT+TGG + chr5_2:67262749-67262768 Msa0783340:intron 35.0%
CATATCCATTGTCACATACA+TGG - chr5_2:67262835-67262854 None:intergenic 35.0%
ATCTCTTCACAAATTGCCTA+TGG - chr5_2:67262901-67262920 None:intergenic 35.0%
TGTATAACACAACCAGTCTA+TGG - chr5_2:67262940-67262959 None:intergenic 35.0%
!! TGTGTTATACAGCGGATTTT+TGG + chr5_2:67262949-67262968 Msa0783340:intron 35.0%
AAGCACTATGTTGTTGTCAA+TGG - chr5_2:67262982-67263001 None:intergenic 35.0%
CATGAATCATAATGCAAACC+TGG + chr5_2:67263019-67263038 Msa0783340:intron 35.0%
! AAACCTGGTTATGTTTTGCA+GGG + chr5_2:67263034-67263053 Msa0783340:intron 35.0%
AAACAATACAGTCACCTGAA+CGG + chr5_2:67263091-67263110 Msa0783340:CDS 35.0%
ACTAAAAAAGTCAGGTGTTC+AGG + chr5_2:67263129-67263148 Msa0783340:CDS 35.0%
AGACACTATATTATCTCCTG+AGG + chr5_2:67263227-67263246 Msa0783340:CDS 35.0%
! AACTTTTGCTCTCAATGCAT+CGG - chr5_2:67263304-67263323 None:intergenic 35.0%
AGCAAAAGTTCTTATAACCG+AGG + chr5_2:67263314-67263333 Msa0783340:CDS 35.0%
ATTATAACAGGCAACTTTCC+TGG + chr5_2:67263712-67263731 Msa0783340:intron 35.0%
ATATATGGGTATGACCATGT+TGG - chr5_2:67263766-67263785 None:intergenic 35.0%
GTCATGTTACCTCAGATATA+TGG - chr5_2:67263781-67263800 None:intergenic 35.0%
TTAGATGTAAAACTCTTGGC+GGG + chr5_2:67264278-67264297 Msa0783340:intron 35.0%
TAACCAATGTTGTCAAACAG+CGG + chr5_2:67264305-67264324 Msa0783340:intron 35.0%
CTTCAAATCACAGTACACAT+AGG + chr5_2:67264651-67264670 Msa0783340:CDS 35.0%
GCTCATTGATATACGGATAA+TGG - chr5_2:67264701-67264720 None:intergenic 35.0%
TCTAGGTGCTCATTGATATA+CGG - chr5_2:67264708-67264727 None:intergenic 35.0%
ACTGGTTACATTCTTTCTCT+AGG - chr5_2:67264725-67264744 None:intergenic 35.0%
! GTTTTGCGAACTGTCTTTGA+AGG - chr5_2:67259109-67259128 None:intergenic 40.0%
! TCATGGAAAGGGTTTAGAGT+GGG - chr5_2:67259131-67259150 None:intergenic 40.0%
ATCATGGAAAGGGTTTAGAG+TGG - chr5_2:67259132-67259151 None:intergenic 40.0%
TGGAAGAGACATCATGGAAA+GGG - chr5_2:67259142-67259161 None:intergenic 40.0%
TGCATAGTGAAATGGTGAAG+TGG - chr5_2:67259162-67259181 None:intergenic 40.0%
TTGAAAGGGGAATTTGTGAG+AGG - chr5_2:67259195-67259214 None:intergenic 40.0%
GTTAATTCCCTTAAAGGGTC+AGG + chr5_2:67259279-67259298 Msa0783340:CDS 40.0%
! GAACCTGTGATTTTGCAACA+CGG - chr5_2:67259350-67259369 None:intergenic 40.0%
ACAGGTTCAACGTAAAGGTT+TGG + chr5_2:67259362-67259381 Msa0783340:CDS 40.0%
TCAACGTAAAGGTTTGGACT+TGG + chr5_2:67259368-67259387 Msa0783340:CDS 40.0%
CTTACAATGTGACCATGATG+TGG - chr5_2:67259993-67260012 None:intergenic 40.0%
!! CAATTTTGGCAGCAAAAGTG+TGG - chr5_2:67260019-67260038 None:intergenic 40.0%
TAGAGGACATATCAAGTGAG+AGG + chr5_2:67260088-67260107 Msa0783340:intron 40.0%
AGAGGACATATCAAGTGAGA+GGG + chr5_2:67260089-67260108 Msa0783340:intron 40.0%
!! GAGATGAGAGCATTTAATGG+TGG + chr5_2:67260124-67260143 Msa0783340:intron 40.0%
! GGCCCTTGGATTAGAATTAA+CGG + chr5_2:67260145-67260164 Msa0783340:intron 40.0%
! GCCCTTGGATTAGAATTAAC+GGG + chr5_2:67260146-67260165 Msa0783340:intron 40.0%
GCCCGTTAATTCTAATCCAA+GGG - chr5_2:67260150-67260169 None:intergenic 40.0%
TGCCCGTTAATTCTAATCCA+AGG - chr5_2:67260151-67260170 None:intergenic 40.0%
GAGAGAAAACGAAGGTTGAA+GGG - chr5_2:67260388-67260407 None:intergenic 40.0%
AGAGAGAAAACGAAGGTTGA+AGG - chr5_2:67260389-67260408 None:intergenic 40.0%
AGAAACGTGAAGATGAAGAG+GGG - chr5_2:67260587-67260606 None:intergenic 40.0%
GAAGAAACGTGAAGATGAAG+AGG - chr5_2:67260589-67260608 None:intergenic 40.0%
! CAAATCCAGTTTTGCAGACA+TGG + chr5_2:67260608-67260627 Msa0783340:intron 40.0%
! CCATCAGATCTGGAATTGAA+GGG - chr5_2:67260704-67260723 None:intergenic 40.0%
CCTTCAATTCCAGATCTGAT+GGG + chr5_2:67260702-67260721 Msa0783340:intron 40.0%
GGCAACTAAGAACGAAAAGA+CGG + chr5_2:67260854-67260873 Msa0783340:intron 40.0%
GAGATGAGAGGGTTAAATTG+TGG - chr5_2:67260958-67260977 None:intergenic 40.0%
TAGAGGCCATATCAAATGAG+AGG - chr5_2:67260995-67261014 None:intergenic 40.0%
GTTCAGATAGCATGCTATCA+CGG - chr5_2:67261230-67261249 None:intergenic 40.0%
GAAGTATACGTAGATGCTAG+AGG + chr5_2:67261511-67261530 Msa0783340:intron 40.0%
CCACGACTTCCTATATACAT+TGG - chr5_2:67262129-67262148 None:intergenic 40.0%
CCAATGTATATAGGAAGTCG+TGG + chr5_2:67262126-67262145 Msa0783340:CDS 40.0%
! GATGCATGGAGGTACAAATA+CGG - chr5_2:67262175-67262194 None:intergenic 40.0%
TCAACATCGTCTTTGATGCA+TGG - chr5_2:67262189-67262208 None:intergenic 40.0%
CTTGACGTTCACAAGACATT+GGG + chr5_2:67262216-67262235 Msa0783340:CDS 40.0%
! GAATTGGTTGCTTTGGATGT+CGG + chr5_2:67262258-67262277 Msa0783340:CDS 40.0%
TTTGTCTTTCTTTCGTGGTC+AGG + chr5_2:67262290-67262309 Msa0783340:intron 40.0%
TTGTCTTTCTTTCGTGGTCA+GGG + chr5_2:67262291-67262310 Msa0783340:intron 40.0%
CAGGGGAGACATATGAAATA+CGG + chr5_2:67262350-67262369 Msa0783340:intron 40.0%
TTCTGAATGGTCGAACAACA+AGG - chr5_2:67262381-67262400 None:intergenic 40.0%
ACAACATGTTATACCAAGCC+AGG + chr5_2:67262402-67262421 Msa0783340:CDS 40.0%
! GAAAATGCTTTTGCACGAGA+AGG - chr5_2:67262446-67262465 None:intergenic 40.0%
AAGTTCATGGCCCAAATTAG+CGG + chr5_2:67262471-67262490 Msa0783340:intron 40.0%
TAGCCCAAAACCGCTAATTT+GGG - chr5_2:67262484-67262503 None:intergenic 40.0%
CCAAATCCCAAACGGAAAAT+AGG - chr5_2:67262759-67262778 None:intergenic 40.0%
!! CCTATTTTCCGTTTGGGATT+TGG + chr5_2:67262756-67262775 Msa0783340:intron 40.0%
TCATGCATCCAAATCCCAAA+CGG - chr5_2:67262767-67262786 None:intergenic 40.0%
GGATTTGGATGCATGAGAAA+TGG + chr5_2:67262771-67262790 Msa0783340:intron 40.0%
TTGAGCCATGTATGTGACAA+TGG + chr5_2:67262827-67262846 Msa0783340:intron 40.0%
TCTTCACAAATTGCCTATGG+TGG - chr5_2:67262898-67262917 None:intergenic 40.0%
! AGACTGGTTGTGTTATACAG+CGG + chr5_2:67262941-67262960 Msa0783340:intron 40.0%
ATGTTGTTGTCAATGGCAGA+AGG - chr5_2:67262975-67262994 None:intergenic 40.0%
ATAGTGCTTTGCAGATCTCT+TGG + chr5_2:67262993-67263012 Msa0783340:intron 40.0%
! CAAACCTGGTTATGTTTTGC+AGG + chr5_2:67263033-67263052 Msa0783340:intron 40.0%
TAACCCTGCAAAACATAACC+AGG - chr5_2:67263040-67263059 None:intergenic 40.0%
ACTCAATCAGGAAAAAGCTG+AGG + chr5_2:67263068-67263087 Msa0783340:CDS 40.0%
AACAATACAGTCACCTGAAC+GGG + chr5_2:67263092-67263111 Msa0783340:CDS 40.0%
! TCTCAATTTGTTTCCCGTTC+AGG - chr5_2:67263108-67263127 None:intergenic 40.0%
! TCAATGCATCGGCATTAAGT+GGG - chr5_2:67263293-67263312 None:intergenic 40.0%
GGTATACATGAGCTGCTTAA+AGG - chr5_2:67263576-67263595 None:intergenic 40.0%
TGTATACCAGTTGACGTTGT+TGG + chr5_2:67263588-67263607 Msa0783340:intron 40.0%
AGGGAGGAAGTAAGAAATCA+TGG - chr5_2:67263644-67263663 None:intergenic 40.0%
AGAAATAGAGAGGAATAGGG+AGG - chr5_2:67263660-67263679 None:intergenic 40.0%
TGGTCATACCCATATATCTG+AGG + chr5_2:67263769-67263788 Msa0783340:CDS 40.0%
ATAGACACTTGAGTAACACG+AGG - chr5_2:67263886-67263905 None:intergenic 40.0%
AGCTCATTGAAAATGCTCAG+TGG + chr5_2:67264124-67264143 Msa0783340:intron 40.0%
ATAGACTTGCATCCCTCAAA+TGG + chr5_2:67264234-67264253 Msa0783340:intron 40.0%
TAGACTTGCATCCCTCAAAT+GGG + chr5_2:67264235-67264254 Msa0783340:intron 40.0%
TGCACATATGACCCATTTGA+GGG - chr5_2:67264249-67264268 None:intergenic 40.0%
ATGCACATATGACCCATTTG+AGG - chr5_2:67264250-67264269 None:intergenic 40.0%
TAGATGTAAAACTCTTGGCG+GGG + chr5_2:67264279-67264298 Msa0783340:intron 40.0%
TTGTGTTCCACGATTGACAT+TGG + chr5_2:67264456-67264475 Msa0783340:intron 40.0%
TGTGTTCCACGATTGACATT+GGG + chr5_2:67264457-67264476 Msa0783340:intron 40.0%
!! AATTAATGCGGTGCTACTAG+AGG - chr5_2:67264494-67264513 None:intergenic 40.0%
!! AACCACTTTTGCTGAAGTCT+TGG - chr5_2:67264617-67264636 None:intergenic 40.0%
AAAGTGGTTCCACTTACAGA+AGG + chr5_2:67264628-67264647 Msa0783340:CDS 40.0%
! GATTTGAAGCCTTCTGTAAG+TGG - chr5_2:67264640-67264659 None:intergenic 40.0%
GTGGAAGAGACATCATGGAA+AGG - chr5_2:67259143-67259162 None:intergenic 45.0%
GTGAAGTGGAAGAGACATCA+TGG - chr5_2:67259148-67259167 None:intergenic 45.0%
GTACCGTGTTGCAAAATCAC+AGG + chr5_2:67259344-67259363 Msa0783340:CDS 45.0%
CGTAAAGGTTTGGACTTGGA+AGG + chr5_2:67259372-67259391 Msa0783340:CDS 45.0%
AGCTAGTGTCGTACGAATGT+CGG + chr5_2:67259626-67259645 Msa0783340:intron 45.0%
CGAGAGACACGGCTAATTTA+AGG + chr5_2:67259653-67259672 Msa0783340:intron 45.0%
TGTTGTCAAATAGCGGCTGT+AGG + chr5_2:67259878-67259897 Msa0783340:intron 45.0%
AAGAGGGGTTCAGACAACTT+AGG - chr5_2:67260572-67260591 None:intergenic 45.0%
CCCTTCAATTCCAGATCTGA+TGG + chr5_2:67260701-67260720 Msa0783340:intron 45.0%
! CCCATCAGATCTGGAATTGA+AGG - chr5_2:67260705-67260724 None:intergenic 45.0%
AGAACGAAAAGACGGAACTG+AGG + chr5_2:67260862-67260881 Msa0783340:intron 45.0%
!! CTGAGAGAGTGCTGAATGAT+TGG + chr5_2:67260886-67260905 Msa0783340:intron 45.0%
! GACACACACACACACACTTT+TGG + chr5_2:67261057-67261076 Msa0783340:intron 45.0%
ATCCTCAGTTGCATTTGACC+AGG + chr5_2:67261199-67261218 Msa0783340:intron 45.0%
ATCCTGGTCAAATGCAACTG+AGG - chr5_2:67261204-67261223 None:intergenic 45.0%
!! TGGGTTAGTATTAGGGGAAG+AGG + chr5_2:67261309-67261328 Msa0783340:intron 45.0%
TGATGAAAACTCGCGTGGAA+AGG + chr5_2:67261668-67261687 Msa0783340:intron 45.0%
TATAGAGTTCTCGCTGTAGC+AGG - chr5_2:67261721-67261740 None:intergenic 45.0%
CAACTCAGGTAATCTACTGC+TGG + chr5_2:67261889-67261908 Msa0783340:intron 45.0%
! CATGGAGGTACAAATACGGT+GGG - chr5_2:67262171-67262190 None:intergenic 45.0%
ACATCGTCTTTGATGCATGG+AGG - chr5_2:67262186-67262205 None:intergenic 45.0%
GCTTGACGTTCACAAGACAT+TGG + chr5_2:67262215-67262234 Msa0783340:CDS 45.0%
TGTCTTTCTTTCGTGGTCAG+GGG + chr5_2:67262292-67262311 Msa0783340:intron 45.0%
! ATGGCCCAAATTAGCGGTTT+TGG + chr5_2:67262477-67262496 Msa0783340:intron 45.0%
! TGGCCCAAATTAGCGGTTTT+GGG + chr5_2:67262478-67262497 Msa0783340:intron 45.0%
GTAGCCCAAAACCGCTAATT+TGG - chr5_2:67262485-67262504 None:intergenic 45.0%
TGTTTCATGGCCAAAACACG+AGG - chr5_2:67262581-67262600 None:intergenic 45.0%
! ATGTTGTCAAATGGGTGCTG+CGG + chr5_2:67262852-67262871 Msa0783340:intron 45.0%
TGATGTTGTATCCCCAGTGA+AGG - chr5_2:67263256-67263275 None:intergenic 45.0%
! CTCAATGCATCGGCATTAAG+TGG - chr5_2:67263294-67263313 None:intergenic 45.0%
ACAACTCCAACAACGTCAAC+TGG - chr5_2:67263597-67263616 None:intergenic 45.0%
CTACTGTGGTTGAATCATCC+AGG - chr5_2:67263733-67263752 None:intergenic 45.0%
CACTTGAGTAACACGAGGAA+GGG - chr5_2:67263881-67263900 None:intergenic 45.0%
ACACTTGAGTAACACGAGGA+AGG - chr5_2:67263882-67263901 None:intergenic 45.0%
TAGAGCGTGTGTGAAGTTCT+AGG - chr5_2:67264061-67264080 None:intergenic 45.0%
AGATGTAAAACTCTTGGCGG+GGG + chr5_2:67264280-67264299 Msa0783340:intron 45.0%
TAGCCGCTGTTTGACAACAT+TGG - chr5_2:67264311-67264330 None:intergenic 45.0%
TGTTGTCAAACAGCGGCTAT+AGG + chr5_2:67264312-67264331 Msa0783340:intron 45.0%
GTTGTCAAACAGCGGCTATA+GGG + chr5_2:67264313-67264332 Msa0783340:intron 45.0%
! GCTGTATTGCTATTGCGCAA+TGG + chr5_2:67264338-67264357 Msa0783340:intron 45.0%
GTCCAAGACTTCAGCAAAAG+TGG + chr5_2:67264612-67264631 Msa0783340:CDS 45.0%
!! ATATATATATATATATATAG+AGG + chr5_2:67260071-67260090 Msa0783340:intron 5.0%
!! ATATATATATATATATATAG+AGG - chr5_2:67260071-67260090 None:intergenic 5.0%
ATGTCGGACATCGAGAGACA+CGG + chr5_2:67259642-67259661 Msa0783340:intron 50.0%
GAGCATTTAATGGTGGCCCT+TGG + chr5_2:67260131-67260150 Msa0783340:intron 50.0%
TCATGGTTGCCCATCAGATC+TGG - chr5_2:67260714-67260733 None:intergenic 50.0%
!! GAGTGCTGAATGATTGGCTG+CGG + chr5_2:67260892-67260911 Msa0783340:intron 50.0%
AACTGAGGATGCAGCACTTG+CGG - chr5_2:67261189-67261208 None:intergenic 50.0%
CATGCTATCACGGAGAATCC+TGG - chr5_2:67261220-67261239 None:intergenic 50.0%
GGAGGGCTGCCAATGTATAT+AGG + chr5_2:67262117-67262136 Msa0783340:CDS 50.0%
! GCATGGAGGTACAAATACGG+TGG - chr5_2:67262172-67262191 None:intergenic 50.0%
GTGGTCAGGGGTTATCTTTG+AGG + chr5_2:67262304-67262323 Msa0783340:intron 50.0%
TGAAGAGATGCCCACCATAC+CGG + chr5_2:67262912-67262931 Msa0783340:intron 50.0%
AGACAAAATCAAGGCGCACG+AGG + chr5_2:67263829-67263848 Msa0783340:intron 50.0%
GGTATGCCCAATGTCAATCG+TGG - chr5_2:67264466-67264485 None:intergenic 50.0%
!! GCGGTGCTACTAGAGGTTAA+TGG - chr5_2:67264487-67264506 None:intergenic 50.0%
! GGAGGTACAAATACGGTGGG+AGG - chr5_2:67262168-67262187 None:intergenic 55.0%
ACACAACCAGTCTATGGCGC+CGG - chr5_2:67262934-67262953 None:intergenic 55.0%
TCTCCTGAGGTAGCCTTCAC+TGG + chr5_2:67263240-67263259 Msa0783340:CDS 55.0%
CTCCTGAGGTAGCCTTCACT+GGG + chr5_2:67263241-67263260 Msa0783340:CDS 55.0%
TCCTGAGGTAGCCTTCACTG+GGG + chr5_2:67263242-67263261 Msa0783340:CDS 55.0%
TTGGCGTGCATGCTCTACTG+TGG - chr5_2:67263747-67263766 None:intergenic 55.0%
GTAGAGCATGCACGCCAACA+TGG + chr5_2:67263749-67263768 Msa0783340:CDS 55.0%
!! GTCTATGGCGCCGGTATGGT+GGG - chr5_2:67262925-67262944 None:intergenic 60.0%
!! AGTCTATGGCGCCGGTATGG+TGG - chr5_2:67262926-67262945 None:intergenic 60.0%
ACCATACCGGCGCCATAGAC+TGG + chr5_2:67262925-67262944 Msa0783340:intron 60.0%
!! ACCAGTCTATGGCGCCGGTA+TGG - chr5_2:67262929-67262948 None:intergenic 60.0%
TCCCCAGTGAAGGCTACCTC+AGG - chr5_2:67263246-67263265 None:intergenic 60.0%
! AGGAAGGGCGTGCATGAGAG+AGG - chr5_2:67263866-67263885 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 67259085 67264889 67259085 ID=Msa0783340;Name=Msa0783340
chr5_2 mRNA 67259085 67264889 67259085 ID=Msa0783340-mRNA-1;Parent=Msa0783340;Name=Msa0783340-mRNA-1;_AED=0.12;_eAED=0.12;_QI=62|1|1|1|1|1|8|217|357
chr5_2 exon 67259085 67259542 67259085 ID=Msa0783340-mRNA-1:exon:20190;Parent=Msa0783340-mRNA-1
chr5_2 exon 67262117 67262279 67262117 ID=Msa0783340-mRNA-1:exon:20191;Parent=Msa0783340-mRNA-1
chr5_2 exon 67262353 67262423 67262353 ID=Msa0783340-mRNA-1:exon:20192;Parent=Msa0783340-mRNA-1
chr5_2 exon 67263055 67263150 67263055 ID=Msa0783340-mRNA-1:exon:20193;Parent=Msa0783340-mRNA-1
chr5_2 exon 67263222 67263335 67263222 ID=Msa0783340-mRNA-1:exon:20194;Parent=Msa0783340-mRNA-1
chr5_2 exon 67263722 67263790 67263722 ID=Msa0783340-mRNA-1:exon:20195;Parent=Msa0783340-mRNA-1
chr5_2 exon 67264126 67264200 67264126 ID=Msa0783340-mRNA-1:exon:20196;Parent=Msa0783340-mRNA-1
chr5_2 exon 67264583 67264889 67264583 ID=Msa0783340-mRNA-1:exon:20197;Parent=Msa0783340-mRNA-1
chr5_2 five_prime_UTR 67259085 67259146 67259085 ID=Msa0783340-mRNA-1:five_prime_utr;Parent=Msa0783340-mRNA-1
chr5_2 CDS 67259147 67259542 67259147 ID=Msa0783340-mRNA-1:cds;Parent=Msa0783340-mRNA-1
chr5_2 CDS 67262117 67262279 67262117 ID=Msa0783340-mRNA-1:cds;Parent=Msa0783340-mRNA-1
chr5_2 CDS 67262353 67262423 67262353 ID=Msa0783340-mRNA-1:cds;Parent=Msa0783340-mRNA-1
chr5_2 CDS 67263055 67263150 67263055 ID=Msa0783340-mRNA-1:cds;Parent=Msa0783340-mRNA-1
chr5_2 CDS 67263222 67263335 67263222 ID=Msa0783340-mRNA-1:cds;Parent=Msa0783340-mRNA-1
chr5_2 CDS 67263722 67263790 67263722 ID=Msa0783340-mRNA-1:cds;Parent=Msa0783340-mRNA-1
chr5_2 CDS 67264126 67264200 67264126 ID=Msa0783340-mRNA-1:cds;Parent=Msa0783340-mRNA-1
chr5_2 CDS 67264583 67264672 67264583 ID=Msa0783340-mRNA-1:cds;Parent=Msa0783340-mRNA-1
chr5_2 three_prime_UTR 67264673 67264889 67264673 ID=Msa0783340-mRNA-1:three_prime_utr;Parent=Msa0783340-mRNA-1
Gene Sequence

>Msa0783340

ATGATGTCTCTTCCACTTCACCATTTCACTATGCAAATGCAAATTCCTCTCACAAATTCCCCTTTCAAAATTTTCCCATTTCACCAACCAATTTTCTCTCCAAAACAACAAGTTTCATTGCAAACCCATGTCGTTAATTCCCTTAAAGGGTCAGGTTATTTATCCGAAATAAGCAAAGCAATCGATTACGAAGAACAGTACCGTGTTGCAAAATCACAGGTTCAACGTAAAGGTTTGGACTTGGAAGGATATTCAATTGAAGGAGTTTCAATTGGTGGACATGAGACTTGTATTATTATTCCTGAGTTTAAATGTGCTTTTGATATTGGAAGATGTCCCACTAGAGCTATTCATCAGAATTTTGTTTTTATCACTCATGCTCATCTTGATCACATTGGAGGGCTGCCAATGTATATAGGAAGTCGTGGTTTATATAATTTGAAGCCTCCCACCGTATTTGTACCTCCATGCATCAAAGACGATGTTGAGAAACTGCTTGACGTTCACAAGACATTGGGCCAAGTTGAACTAAATTGTGAATTGGTTGCTTTGGATGTCGGGGAGACATATGAAATACGGAATGACCTTGTTGTTCGACCATTCAGAACACAACATGTTATACCAAGCCAGGGTTATATAGTCTACTCAATCAGGAAAAAGCTGAGGAAACAATACAGTCACCTGAACGGGAAACAAATTGAGAAACTAAAAAAGTCAGGTGTTCAGATTACAGACACTATATTATCTCCTGAGGTAGCCTTCACTGGGGATACAACATCAGATTTTATGCTTGACCCACTTAATGCCGATGCATTGAGAGCAAAAGTTCTTATAACCGAGGCAACTTTCCTGGATGATTCAACCACAGTAGAGCATGCACGCCAACATGGTCATACCCATATATCTGAGCTCATTGAAAATGCTCAGTGGATTCGCAACAAAACAGTTCTGCTGACTCATTTTTCATCAAGATACAATATAGAGGATATTCGTCAAGCTGCATCAGAATTGCAGTCCAAGACTTCAGCAAAAGTGGTTCCACTTACAGAAGGCTTCAAATCACAGTACACATAG

Protein sequence

>Msa0783340

MMSLPLHHFTMQMQIPLTNSPFKIFPFHQPIFSPKQQVSLQTHVVNSLKGSGYLSEISKAIDYEEQYRVAKSQVQRKGLDLEGYSIEGVSIGGHETCIIIPEFKCAFDIGRCPTRAIHQNFVFITHAHLDHIGGLPMYIGSRGLYNLKPPTVFVPPCIKDDVEKLLDVHKTLGQVELNCELVALDVGETYEIRNDLVVRPFRTQHVIPSQGYIVYSIRKKLRKQYSHLNGKQIEKLKKSGVQITDTILSPEVAFTGDTTSDFMLDPLNADALRAKVLITEATFLDDSTTVEHARQHGHTHISELIENAQWIRNKTVLLTHFSSRYNIEDIRQAASELQSKTSAKVVPLTEGFKSQYT*