AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1133660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1133660 MtrunA17_Chr7g0260671 95.427 503 23 0 1 503 1 503 0.0 992
Msa1133660 MtrunA17_Chr7g0260681 94.286 420 24 0 1 420 1 420 0.0 801
Msa1133660 MtrunA17_Chr4g0039301 54.206 428 182 9 73 495 99 517 2.17e-167 483
Msa1133660 MtrunA17_Chr2g0283561 40.686 408 214 5 74 474 39 425 5.18e-100 308
Msa1133660 MtrunA17_Chr4g0046001 39.430 421 218 8 74 488 13 402 3.81e-96 296
Msa1133660 MtrunA17_Chr4g0046011 38.480 421 222 8 74 488 4 393 1.17e-94 293
Msa1133660 MtrunA17_Chr7g0214711 41.761 352 173 10 74 418 105 431 3.24e-84 269
Msa1133660 MtrunA17_Chr5g0399641 39.578 379 196 11 74 437 135 495 2.74e-81 263
Msa1133660 MtrunA17_Chr4g0041311 33.556 450 244 7 52 475 10 430 3.41e-81 259
Msa1133660 MtrunA17_Chr7g0250611 38.235 374 189 12 74 434 75 419 2.38e-77 248
Msa1133660 MtrunA17_Chr7g0250561 34.549 466 242 15 10 438 11 450 2.10e-75 244
Msa1133660 MtrunA17_Chr4g0055691 39.024 369 195 9 78 437 133 480 2.09e-71 236
Msa1133660 MtrunA17_Chr7g0260691 97.727 44 1 0 460 503 13 56 3.01e-23 92.8
Msa1133660 MtrunA17_Chr2g0286301 34.940 166 80 7 198 359 98 239 1.17e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1133660 AT2G30550.2 55.705 447 187 7 58 497 83 525 0.0 525
Msa1133660 AT1G06800.1 57.243 428 173 7 74 495 85 508 0.0 519
Msa1133660 AT1G51440.1 53.182 440 179 10 72 495 85 513 7.89e-157 457
Msa1133660 AT2G30550.1 57.682 371 146 7 58 421 83 449 2.98e-156 453
Msa1133660 AT1G06800.2 59.207 353 134 7 74 420 85 433 7.80e-154 446
Msa1133660 AT1G30370.1 42.469 405 216 7 74 473 114 506 1.17e-108 333
Msa1133660 AT1G05800.1 43.059 353 176 8 72 419 78 410 2.30e-92 289
Msa1133660 AT1G06250.1 37.805 410 224 6 74 474 5 392 9.68e-88 276
Msa1133660 AT2G31690.1 41.417 367 193 9 66 427 80 429 1.38e-87 277
Msa1133660 AT4G18550.1 36.029 408 232 4 76 475 21 407 2.12e-87 275
Msa1133660 AT4G18550.2 36.029 408 232 4 76 475 38 424 3.70e-87 275
Msa1133660 AT2G42690.1 35.308 422 224 6 77 475 7 402 6.93e-83 263
Msa1133660 AT4G16820.1 39.512 410 207 13 41 436 96 478 6.16e-78 253
Msa1133660 AT2G44810.2 35.938 384 207 10 70 434 80 443 4.06e-77 249
Msa1133660 AT2G44810.1 37.027 370 196 9 82 434 4 353 9.06e-77 245
Msa1133660 AT4G18550.3 37.818 275 165 2 76 344 38 312 1.78e-63 209
Msa1133660 AT1G06250.2 36.455 299 164 3 181 474 1 278 9.93e-60 199

Find 130 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAGATTGGAGAAACATTT+AGG 0.169595 7_3:+87282821 Msa1133660:CDS
ATTAGTTCGGATCGCATTAT+TGG 0.222517 7_3:-87281862 None:intergenic
TATCTTGGTAAAGAGGTTTA+AGG 0.239651 7_3:-87282484 None:intergenic
TTCAAATCTTGCCTCCAATT+TGG 0.241101 7_3:-87284550 None:intergenic
CGAGATTTCTTAAAGAAATC+TGG 0.241938 7_3:-87282057 None:intergenic
TTTCACAATTTGATGCATTA+AGG 0.255076 7_3:-87284830 None:intergenic
GGACATTGCTTTGGTGAATA+AGG 0.258869 7_3:+87284492 Msa1133660:CDS
AAGAAAGTGGATTCGGATTT+GGG 0.266472 7_3:-87281613 None:intergenic
GAAGAAAGTGGATTCGGATT+TGG 0.267139 7_3:-87281614 None:intergenic
GTTGGGAACATGAAATTTAA+AGG 0.267233 7_3:+87282800 Msa1133660:CDS
GGGTTAAATGTTAGGGAAAA+TGG 0.274934 7_3:+87282734 Msa1133660:CDS
TTGTGTAATGGTGTTGATTT+GGG 0.277245 7_3:-87281725 None:intergenic
CAGAAACAGGGTTAAATGTT+AGG 0.283257 7_3:+87282726 Msa1133660:CDS
GATATGAAGCAACCACTAAT+AGG 0.305971 7_3:+87284470 Msa1133660:CDS
CTCGATGGCCAGATAAATAT+TGG 0.316448 7_3:+87282076 Msa1133660:CDS
CATGAAATTTAAAGGGAGAT+TGG 0.327254 7_3:+87282808 Msa1133660:CDS
GGAGATTGGAGAAACATTTA+GGG 0.327887 7_3:+87282822 Msa1133660:CDS
GTTGTGTAATGGTGTTGATT+TGG 0.336507 7_3:-87281726 None:intergenic
GGGTTTGTGGGTTTGTTGTT+TGG 0.343105 7_3:-87281666 None:intergenic
TCCGAATCCACTTTCTTCTT+CGG 0.346871 7_3:+87281619 Msa1133660:CDS
GCGGTGTTATATCTTTAAAA+AGG 0.349308 7_3:+87284986 Msa1133660:three_prime_UTR
ATTGGAGCGAACACGCGAAT+TGG 0.349997 7_3:+87282094 Msa1133660:CDS
GCAAGATTTGAATAGGAATA+TGG 0.354087 7_3:+87284561 Msa1133660:CDS
GCGTTTGATATAGCAGAAAC+AGG 0.357748 7_3:+87282713 Msa1133660:CDS
AGCACTCTGTGCCACCAAAT+TGG 0.358258 7_3:+87284536 Msa1133660:CDS
GAAGTTAGTATTACGTTAAC+GGG 0.360874 7_3:+87282656 Msa1133660:CDS
TTAGTTCGGATCGCATTATT+GGG 0.370755 7_3:-87281861 None:intergenic
ATTGGAGGCAAGATTTGAAT+AGG 0.374370 7_3:+87284554 Msa1133660:CDS
ACGTTAACGGGACATAGTTT+AGG 0.375765 7_3:+87282668 Msa1133660:CDS
TGTTCGCTCCAATATTTATC+TGG 0.378386 7_3:-87282084 None:intergenic
AAAATCAAATGCATCATAAC+AGG 0.381110 7_3:-87281908 None:intergenic
GTGAGAATGAAGATGGAGTT+TGG 0.393087 7_3:-87281548 None:intergenic
AAATCCACGGTGAAGATGAT+TGG 0.395504 7_3:+87281815 Msa1133660:CDS
GCACATGCAGCATCAGCATT+AGG 0.397000 7_3:-87283025 None:intergenic
ATAAGAAACCCTGGTGACTT+TGG 0.419814 7_3:-87282884 None:intergenic
TTACCAAGATATTCCTTGTC+CGG 0.425973 7_3:+87282496 Msa1133660:CDS
TTGGGAACATGAAATTTAAA+GGG 0.429025 7_3:+87282801 Msa1133660:CDS
CACTAATAGGGACATTGCTT+TGG 0.430429 7_3:+87284483 Msa1133660:CDS
CAAAGCAATGTCCCTATTAG+TGG 0.431741 7_3:-87284482 None:intergenic
TCCGAAGAAGAAAGTGGATT+CGG 0.434609 7_3:-87281620 None:intergenic
GGTTTGTTGTTTGGAATTTG+AGG 0.434688 7_3:-87281657 None:intergenic
GGTTCATAATAAGCATGATA+TGG 0.439973 7_3:+87282859 Msa1133660:CDS
TGCTGCATGTGCTCATAACT+TGG 0.440073 7_3:+87283036 Msa1133660:CDS
AGAAACAGGGTTAAATGTTA+GGG 0.448099 7_3:+87282727 Msa1133660:CDS
TTTGATGCATTAAGGATGCT+TGG 0.454648 7_3:-87284822 None:intergenic
TAACATTTGCTGTGGCATAT+AGG 0.457324 7_3:-87282029 None:intergenic
ATGAAGATGGAGTTTGGAGC+TGG 0.458036 7_3:-87281542 None:intergenic
AGAAGTTAGTATTACGTTAA+CGG 0.458390 7_3:+87282655 Msa1133660:CDS
TTGTGATTGGAGTTGTGTAA+TGG 0.458559 7_3:-87281737 None:intergenic
CAAGGAATATCTTGGTAAAG+AGG 0.459874 7_3:-87282491 None:intergenic
AAATGCATCATAACAGGCTT+GGG 0.461251 7_3:-87281902 None:intergenic
CAAATGCATCATAACAGGCT+TGG 0.470701 7_3:-87281903 None:intergenic
CCCTAAAACTTGTTCTCTTG+CGG 0.472497 7_3:-87282597 None:intergenic
GATCGCATTATTGGGTCCAT+TGG 0.473058 7_3:-87281853 None:intergenic
CATATCCACGGTTGCTCCCA+TGG 0.475119 7_3:-87284453 None:intergenic
GCAGAGACATTGTTATTGCT+TGG 0.475619 7_3:+87282414 Msa1133660:CDS
GTAATACTAACTTCTTCATC+AGG 0.475955 7_3:-87282647 None:intergenic
TCTACTCGAACGTCGTTGTC+CGG 0.476225 7_3:-87282515 None:intergenic
CGAAGATGGACGTTGGGTGC+TGG 0.476306 7_3:+87284591 Msa1133660:CDS
AATCCACGGTGAAGATGATT+GGG 0.485607 7_3:+87281816 Msa1133660:CDS
TGTTGCTTCATCGTTTGAAA+CGG 0.487757 7_3:-87282130 None:intergenic
GAGCCTTATCTCTCTCAGAT+AGG 0.488241 7_3:+87284655 Msa1133660:CDS
AGTTCCCTTTAAAAGTAACT+TGG 0.492837 7_3:+87284874 Msa1133660:three_prime_UTR
CAGCACCCAACGTCCATCTT+CGG 0.497295 7_3:-87284590 None:intergenic
AAATCTTGCCTCCAATTTGG+TGG 0.500957 7_3:-87284547 None:intergenic
TTCTCCGTAACGGATTAGTT+CGG 0.501522 7_3:-87281875 None:intergenic
CGTTAGATCTTCCACACATA+GGG 0.505096 7_3:+87281989 Msa1133660:CDS
GAGATTTCTTAAAGAAATCT+GGG 0.505416 7_3:-87282056 None:intergenic
AACCGTTACTCATGTCGAAT+GGG 0.510098 7_3:+87282442 Msa1133660:CDS
GAGCGAACACGCGAATTGGA+TGG 0.515578 7_3:+87282098 Msa1133660:CDS
TGTTTGGAATTTGAGGTGGT+TGG 0.521451 7_3:-87281650 None:intergenic
GATATGGTGCCAAAGTCACC+AGG 0.523665 7_3:+87282875 Msa1133660:CDS
TGTCCGGACAAGGAATATCT+TGG 0.524914 7_3:-87282499 None:intergenic
TGTTGGAGTTGAGTTAGAGT+TGG 0.525724 7_3:+87282976 Msa1133660:CDS
ATGCATCAAATTGTGAAACT+AGG 0.530700 7_3:+87284835 Msa1133660:three_prime_UTR
AGCGAACACGCGAATTGGAT+GGG 0.532329 7_3:+87282099 Msa1133660:CDS
AATATGGTGAAGACCGAAGA+TGG 0.533831 7_3:+87284577 Msa1133660:CDS
TAGTGGTTGCTTCATATCCA+CGG 0.536813 7_3:-87284465 None:intergenic
ATATGAAGCAACCACTAATA+GGG 0.537930 7_3:+87284471 Msa1133660:CDS
GATGAGTATCTGCAAGTTGT+GGG 0.543513 7_3:-87284621 None:intergenic
GGTTGGACTTCTAGATCCAA+TGG 0.547144 7_3:+87281837 Msa1133660:CDS
CTGAGGATATTGATATTCCA+TGG 0.547347 7_3:+87282942 Msa1133660:CDS
AATTTCATGTTCCCAACCCT+AGG 0.550462 7_3:-87282794 None:intergenic
AGTGGATTCGGATTTGGGAA+AGG 0.556138 7_3:-87281608 None:intergenic
TGCATGTGCTCATAACTTGG+AGG 0.557550 7_3:+87283039 Msa1133660:CDS
TCGTTAGATCTTCCACACAT+AGG 0.560088 7_3:+87281988 Msa1133660:CDS
TGATGATGAGCAGGTACCAT+GGG 0.560215 7_3:+87284437 Msa1133660:intron
ACTCTGTGCCACCAAATTGG+AGG 0.560687 7_3:+87284539 Msa1133660:CDS
GAACCGTTACTCATGTCGAA+TGG 0.561270 7_3:+87282441 Msa1133660:CDS
AATGGTGTTGATTTGGGATG+CGG 0.561445 7_3:-87281719 None:intergenic
ATTGAATCCGAAGAAGAAAG+TGG 0.561829 7_3:-87281626 None:intergenic
GATCCATATTCAAAATATTG+TGG 0.563766 7_3:+87281931 Msa1133660:CDS
AGTCCTATCTGAGAGAGATA+AGG 0.565544 7_3:-87284658 None:intergenic
ACCCATCGAGTATGTGCAAG+TGG 0.565551 7_3:-87283063 None:intergenic
GCCCACTTGCACATACTCGA+TGG 0.566632 7_3:+87283061 Msa1133660:CDS
CACGGTGAAGATGATTGGGT+TGG 0.567726 7_3:+87281820 Msa1133660:CDS
CGATCCGAACTAATCCGTTA+CGG 0.571824 7_3:+87281871 Msa1133660:CDS
CCATGGTGTTACACTCATGT+TGG 0.572004 7_3:+87282959 Msa1133660:CDS
GACATTGTTATTGCTTGGCG+AGG 0.572632 7_3:+87282419 Msa1133660:CDS
TGTTGGAGTGAGAATGAAGA+TGG 0.573392 7_3:-87281555 None:intergenic
GAAGACCGAAGATGGACGTT+GGG 0.573919 7_3:+87284585 Msa1133660:CDS
TTCTCATTAATAAGAAACCC+TGG 0.577571 7_3:-87282893 None:intergenic
TTGTTGTTTGGAATTTGAGG+TGG 0.580769 7_3:-87281654 None:intergenic
AACGACGTTCGAGTAGAAGC+AGG 0.582473 7_3:+87282521 Msa1133660:CDS
TGATGAGTATCTGCAAGTTG+TGG 0.587655 7_3:-87284622 None:intergenic
GGAGTCTTGCTGAATTGAGT+AGG 0.592918 7_3:-87281521 None:intergenic
ACATAGTTTAGGAAGTGCTA+TGG 0.599721 7_3:+87282679 Msa1133660:CDS
GTGGTTATTAAAGTTTGCTG+AGG 0.600416 7_3:+87282925 Msa1133660:CDS
CGTTTGATATAGCAGAAACA+GGG 0.608919 7_3:+87282714 Msa1133660:CDS
TCTTCATTCTCACTCCAACA+TGG 0.609427 7_3:+87281558 Msa1133660:exon
GGGAACTTGATGGATGTAAG+TGG 0.610977 7_3:-87284858 None:intergenic
TGTGTGGAAGATCTAACGAT+GGG 0.619407 7_3:-87281984 None:intergenic
CCCACTTGCACATACTCGAT+GGG 0.620876 7_3:+87283062 Msa1133660:CDS
TTGATGATGAGCAGGTACCA+TGG 0.623853 7_3:+87284436 Msa1133660:intron
TACCCATTCGACATGAGTAA+CGG 0.630242 7_3:-87282444 None:intergenic
AGAGATTGATGCAGCCATGT+TGG 0.632676 7_3:-87281572 None:intergenic
TGGGACGTTAACATTTGCTG+TGG 0.639988 7_3:-87282037 None:intergenic
AGGTACCATGGGAGCAACCG+TGG 0.651704 7_3:+87284448 Msa1133660:intron
GTTACGTCATACCCTATGTG+TGG 0.653846 7_3:-87282000 None:intergenic
GAGATTGGAGAAACATTTAG+GGG 0.658549 7_3:+87282823 Msa1133660:CDS
ATTTCTTTAAGAAATCTCGA+TGG 0.659322 7_3:+87282061 Msa1133660:CDS
CCCATCGAGTATGTGCAAGT+GGG 0.660658 7_3:-87283062 None:intergenic
TTAATGAGAAATCGCCTGAG+TGG 0.664008 7_3:+87282906 Msa1133660:CDS
GCAAACTTTAATAACCACTC+AGG 0.666053 7_3:-87282920 None:intergenic
CCAACATGAGTGTAACACCA+TGG 0.679476 7_3:-87282959 None:intergenic
ATGTGTGGAAGATCTAACGA+TGG 0.689828 7_3:-87281985 None:intergenic
TGAAGACCGAAGATGGACGT+TGG 0.699979 7_3:+87284584 Msa1133660:CDS
GATGCTTGGAGAGTGTACGT+TGG 0.734170 7_3:-87284808 None:intergenic
CAACCCAATCATCTTCACCG+TGG 0.749438 7_3:-87281819 None:intergenic
ATATGGTGCCAAAGTCACCA+GGG 0.760395 7_3:+87282876 Msa1133660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAACTAAAAAATTTAAATA+TGG + chr7_3:87283403-87283422 Msa1133660:intron 10.0%
!! AACTAAAAAATTTAAATATG+GGG + chr7_3:87283405-87283424 Msa1133660:intron 10.0%
!! TATATAGTGTAAAAAAAAAA+AGG + chr7_3:87283699-87283718 Msa1133660:intron 10.0%
!! ATATAGTGTAAAAAAAAAAA+GGG + chr7_3:87283700-87283719 Msa1133660:intron 10.0%
!!! AAGAATAATGTTTATAATTT+TGG + chr7_3:87284295-87284314 Msa1133660:intron 10.0%
!!! GATATATTTAGTTCAAATTT+TGG - chr7_3:87282274-87282293 None:intergenic 15.0%
!! TTCAAACATAAATAACATTA+GGG - chr7_3:87282383-87282402 None:intergenic 15.0%
!! TTTCAAACATAAATAACATT+AGG - chr7_3:87282384-87282403 None:intergenic 15.0%
!! TGATTCCAAATATAAAAATA+TGG - chr7_3:87283262-87283281 None:intergenic 15.0%
!! ACTAAAAAATTTAAATATGG+GGG + chr7_3:87283406-87283425 Msa1133660:intron 15.0%
!!! TTTTTTAAGCAAAAAGATTA+TGG + chr7_3:87283480-87283499 Msa1133660:intron 15.0%
!!! TTTTTAAGCAAAAAGATTAT+GGG + chr7_3:87283481-87283500 Msa1133660:intron 15.0%
!!! TGAGTATTTGATTTTTTAAT+AGG + chr7_3:87283803-87283822 Msa1133660:intron 15.0%
!!! TTTAGAATGATACATTTTTT+TGG - chr7_3:87284108-87284127 None:intergenic 15.0%
!!! TTATGTTAACTATTTTTGAA+TGG + chr7_3:87284371-87284390 Msa1133660:intron 15.0%
!!! GTTTATTATTATTCTTTTAG+CGG + chr7_3:87284967-87284986 Msa1133660:three_prime_UTR 15.0%
!! TATATTTAATACATGCATGA+GGG - chr7_3:87282211-87282230 None:intergenic 20.0%
!! ATATATTTAATACATGCATG+AGG - chr7_3:87282212-87282231 None:intergenic 20.0%
!!! TTATGAGTATATTTTGAGAT+CGG + chr7_3:87282311-87282330 Msa1133660:intron 20.0%
!!! ATATTTTGCAAATGAACTTT+TGG + chr7_3:87282339-87282358 Msa1133660:intron 20.0%
!!! TATTTATGTTTGAAACTAAC+AGG + chr7_3:87282389-87282408 Msa1133660:intron 20.0%
!!! TTTAAGGTAATTTTGAAGAT+TGG - chr7_3:87282471-87282490 None:intergenic 20.0%
!! AAAATGAAAAAACAGAAACA+TGG - chr7_3:87282769-87282788 None:intergenic 20.0%
!!! CACTACCATATTTTTATATT+TGG + chr7_3:87283254-87283273 Msa1133660:intron 20.0%
!!! TTTTAAGCAAAAAGATTATG+GGG + chr7_3:87283482-87283501 Msa1133660:intron 20.0%
!! AATAACGAAAAACATTTGTT+CGG - chr7_3:87283583-87283602 None:intergenic 20.0%
!!! CAAATGTTTTTCGTTATTTA+TGG + chr7_3:87283585-87283604 Msa1133660:intron 20.0%
!!! TTTTTTACACTATATATGTC+TGG - chr7_3:87283695-87283714 None:intergenic 20.0%
!!! ACATAGCTAGTAATTTTATT+TGG - chr7_3:87283888-87283907 None:intergenic 20.0%
!! ACAAATGCATAATATATGAA+GGG + chr7_3:87284007-87284026 Msa1133660:intron 20.0%
!! AATGGCAAAATTTGTATATA+TGG + chr7_3:87284389-87284408 Msa1133660:intron 20.0%
!! ATGGCAAAATTTGTATATAT+GGG + chr7_3:87284390-87284409 Msa1133660:intron 20.0%
!!! TGATTGAATACTGTAATTTT+TGG + chr7_3:87284715-87284734 Msa1133660:three_prime_UTR 20.0%
!!! ATTGTTTTGTGTTTTGTGAT+TGG - chr7_3:87281753-87281772 None:intergenic 25.0%
! AAAATCAAATGCATCATAAC+AGG - chr7_3:87281911-87281930 None:intergenic 25.0%
! GATCCATATTCAAAATATTG+TGG + chr7_3:87281931-87281950 Msa1133660:CDS 25.0%
!!! CTACCACAATATTTTGAATA+TGG - chr7_3:87281937-87281956 None:intergenic 25.0%
! GAGATTTCTTAAAGAAATCT+GGG - chr7_3:87282059-87282078 None:intergenic 25.0%
!! ATTTCTTTAAGAAATCTCGA+TGG + chr7_3:87282061-87282080 Msa1133660:CDS 25.0%
! AGAAGTTAGTATTACGTTAA+CGG + chr7_3:87282655-87282674 Msa1133660:CDS 25.0%
!!! GTTTCTGTTTTTTCATTTTC+TGG + chr7_3:87282770-87282789 Msa1133660:CDS 25.0%
! TTGGGAACATGAAATTTAAA+GGG + chr7_3:87282801-87282820 Msa1133660:CDS 25.0%
!!! GATTTGATTTTCAATTCTAC+TGG - chr7_3:87283631-87283650 None:intergenic 25.0%
! GACAAATGCATAATATATGA+AGG + chr7_3:87284006-87284025 Msa1133660:intron 25.0%
! CAAATGCATAATATATGAAG+GGG + chr7_3:87284008-87284027 Msa1133660:intron 25.0%
!! ACATTTTAAATATGGAGAAG+TGG - chr7_3:87284058-87284077 None:intergenic 25.0%
!!! GATTATTTGTGATTTGTTGA+TGG + chr7_3:87284212-87284231 Msa1133660:intron 25.0%
!!! ATTTGTTGCTTTTGATTCAT+AGG - chr7_3:87284351-87284370 None:intergenic 25.0%
! TTTCACAATTTGATGCATTA+AGG - chr7_3:87284833-87284852 None:intergenic 25.0%
!!! GAAACCAAGTTACTTTTAAA+GGG - chr7_3:87284881-87284900 None:intergenic 25.0%
!!! AGAAACCAAGTTACTTTTAA+AGG - chr7_3:87284882-87284901 None:intergenic 25.0%
!! AAAAACAAGTTACTTTAGCT+AGG - chr7_3:87284906-87284925 None:intergenic 25.0%
!!! TTTTTGTTGTTAGGGTTTGT+GGG - chr7_3:87281681-87281700 None:intergenic 30.0%
!!! TTTTTTGTTGTTAGGGTTTG+TGG - chr7_3:87281682-87281701 None:intergenic 30.0%
!!! GGTGAGTTTTTTTGTTGTTA+GGG - chr7_3:87281689-87281708 None:intergenic 30.0%
!!! TGGTGAGTTTTTTTGTTGTT+AGG - chr7_3:87281690-87281709 None:intergenic 30.0%
!! TTGTGTAATGGTGTTGATTT+GGG - chr7_3:87281728-87281747 None:intergenic 30.0%
CGAGATTTCTTAAAGAAATC+TGG - chr7_3:87282060-87282079 None:intergenic 30.0%
GATGAAGCAACACAAAAAAT+CGG + chr7_3:87282141-87282160 Msa1133660:CDS 30.0%
TATCTTGGTAAAGAGGTTTA+AGG - chr7_3:87282487-87282506 None:intergenic 30.0%
GTAATACTAACTTCTTCATC+AGG - chr7_3:87282650-87282669 None:intergenic 30.0%
GAAGTTAGTATTACGTTAAC+GGG + chr7_3:87282656-87282675 Msa1133660:CDS 30.0%
AGAAACAGGGTTAAATGTTA+GGG + chr7_3:87282727-87282746 Msa1133660:CDS 30.0%
!!! TTTTTTCATTTTCTGGACCT+AGG + chr7_3:87282777-87282796 Msa1133660:CDS 30.0%
! TTTTTCATTTTCTGGACCTA+GGG + chr7_3:87282778-87282797 Msa1133660:CDS 30.0%
GTTGGGAACATGAAATTTAA+AGG + chr7_3:87282800-87282819 Msa1133660:CDS 30.0%
CATGAAATTTAAAGGGAGAT+TGG + chr7_3:87282808-87282827 Msa1133660:CDS 30.0%
! ATTTAGGGGTTAAGATTTTG+AGG + chr7_3:87282837-87282856 Msa1133660:CDS 30.0%
! TTTAGGGGTTAAGATTTTGA+GGG + chr7_3:87282838-87282857 Msa1133660:CDS 30.0%
GGTTCATAATAAGCATGATA+TGG + chr7_3:87282859-87282878 Msa1133660:CDS 30.0%
TTCTCATTAATAAGAAACCC+TGG - chr7_3:87282896-87282915 None:intergenic 30.0%
TCAAAAATGGAGAAATCTTG+TGG - chr7_3:87283003-87283022 None:intergenic 30.0%
TCAGCATTAGGATTCAAAAA+TGG - chr7_3:87283016-87283035 None:intergenic 30.0%
CTTCGATTGAATTGATTGAT+AGG + chr7_3:87283148-87283167 Msa1133660:intron 30.0%
!!! TTTTGAAATAGGATTCTTGC+CGG - chr7_3:87283560-87283579 None:intergenic 30.0%
!!! CATTTGTTCGGTTTTGAAAT+AGG - chr7_3:87283571-87283590 None:intergenic 30.0%
! GAGCTCACACATTTTAAATA+TGG - chr7_3:87284066-87284085 None:intergenic 30.0%
ATATGAAGCAACCACTAATA+GGG + chr7_3:87284471-87284490 Msa1133660:CDS 30.0%
GCAAGATTTGAATAGGAATA+TGG + chr7_3:87284561-87284580 Msa1133660:CDS 30.0%
ATGCATCAAATTGTGAAACT+AGG + chr7_3:87284835-87284854 Msa1133660:three_prime_UTR 30.0%
!! TACTTTTAAAGGGAACTTGA+TGG - chr7_3:87284871-87284890 None:intergenic 30.0%
! AGTTCCCTTTAAAAGTAACT+TGG + chr7_3:87284874-87284893 Msa1133660:three_prime_UTR 30.0%
!! GCGGTGTTATATCTTTAAAA+AGG + chr7_3:87284986-87285005 Msa1133660:three_prime_UTR 30.0%
! AAGAAAGTGGATTCGGATTT+GGG - chr7_3:87281616-87281635 None:intergenic 35.0%
ATTGAATCCGAAGAAGAAAG+TGG - chr7_3:87281629-87281648 None:intergenic 35.0%
!! TTGTTGTTTGGAATTTGAGG+TGG - chr7_3:87281657-87281676 None:intergenic 35.0%
!! GGTTTGTTGTTTGGAATTTG+AGG - chr7_3:87281660-87281679 None:intergenic 35.0%
!! GTTGTGTAATGGTGTTGATT+TGG - chr7_3:87281729-87281748 None:intergenic 35.0%
TTGTGATTGGAGTTGTGTAA+TGG - chr7_3:87281740-87281759 None:intergenic 35.0%
!!! TGCTTTTTCTATGGGAAGTT+CGG - chr7_3:87281788-87281807 None:intergenic 35.0%
AACTTCCCATAGAAAAAGCA+TGG + chr7_3:87281788-87281807 Msa1133660:CDS 35.0%
!!! TTTCGCCATGCTTTTTCTAT+GGG - chr7_3:87281796-87281815 None:intergenic 35.0%
!!! TTTTCGCCATGCTTTTTCTA+TGG - chr7_3:87281797-87281816 None:intergenic 35.0%
TTAGTTCGGATCGCATTATT+GGG - chr7_3:87281864-87281883 None:intergenic 35.0%
ATTAGTTCGGATCGCATTAT+TGG - chr7_3:87281865-87281884 None:intergenic 35.0%
AAATGCATCATAACAGGCTT+GGG - chr7_3:87281905-87281924 None:intergenic 35.0%
ATGGGAAAAATTCAAGGTGT+GGG - chr7_3:87281969-87281988 None:intergenic 35.0%
CTAACGATGGGAAAAATTCA+AGG - chr7_3:87281975-87281994 None:intergenic 35.0%
!! TAACATTTGCTGTGGCATAT+AGG - chr7_3:87282032-87282051 None:intergenic 35.0%
TGTTCGCTCCAATATTTATC+TGG - chr7_3:87282087-87282106 None:intergenic 35.0%
! TGTTGCTTCATCGTTTGAAA+CGG - chr7_3:87282133-87282152 None:intergenic 35.0%
CAAGGAATATCTTGGTAAAG+AGG - chr7_3:87282494-87282513 None:intergenic 35.0%
TTACCAAGATATTCCTTGTC+CGG + chr7_3:87282496-87282515 Msa1133660:CDS 35.0%
ACCGATAGACTCAAAAAAGA+CGG + chr7_3:87282560-87282579 Msa1133660:CDS 35.0%
!!! ACCGTCTTTTTTGAGTCTAT+CGG - chr7_3:87282564-87282583 None:intergenic 35.0%
!! ACATAGTTTAGGAAGTGCTA+TGG + chr7_3:87282679-87282698 Msa1133660:CDS 35.0%
CGTTTGATATAGCAGAAACA+GGG + chr7_3:87282714-87282733 Msa1133660:CDS 35.0%
CAGAAACAGGGTTAAATGTT+AGG + chr7_3:87282726-87282745 Msa1133660:CDS 35.0%
GGGTTAAATGTTAGGGAAAA+TGG + chr7_3:87282734-87282753 Msa1133660:CDS 35.0%
GGAGATTGGAGAAACATTTA+GGG + chr7_3:87282822-87282841 Msa1133660:CDS 35.0%
GAGATTGGAGAAACATTTAG+GGG + chr7_3:87282823-87282842 Msa1133660:CDS 35.0%
GCAAACTTTAATAACCACTC+AGG - chr7_3:87282923-87282942 None:intergenic 35.0%
!! GTGGTTATTAAAGTTTGCTG+AGG + chr7_3:87282925-87282944 Msa1133660:CDS 35.0%
CTGAGGATATTGATATTCCA+TGG + chr7_3:87282942-87282961 Msa1133660:CDS 35.0%
TGCACATGCAAATACGTAAT+TGG - chr7_3:87283118-87283137 None:intergenic 35.0%
TCATTGGGCTTACTATTCAA+GGG - chr7_3:87283318-87283337 None:intergenic 35.0%
CGATCTTTCAACAACTCATT+GGG - chr7_3:87283333-87283352 None:intergenic 35.0%
TCGATCTTTCAACAACTCAT+TGG - chr7_3:87283334-87283353 None:intergenic 35.0%
! TAGAGCAGAAAGCACATAAA+AGG + chr7_3:87283523-87283542 Msa1133660:intron 35.0%
! AGAGCAGAAAGCACATAAAA+GGG + chr7_3:87283524-87283543 Msa1133660:intron 35.0%
!! GTATAACTTTGATGATGAGC+AGG + chr7_3:87284428-87284447 Msa1133660:intron 35.0%
GATATGAAGCAACCACTAAT+AGG + chr7_3:87284470-87284489 Msa1133660:CDS 35.0%
TTCAAATCTTGCCTCCAATT+TGG - chr7_3:87284553-87284572 None:intergenic 35.0%
ATTGGAGGCAAGATTTGAAT+AGG + chr7_3:87284554-87284573 Msa1133660:CDS 35.0%
TTTGATGCATTAAGGATGCT+TGG - chr7_3:87284825-87284844 None:intergenic 35.0%
GTGAGAATGAAGATGGAGTT+TGG - chr7_3:87281551-87281570 None:intergenic 40.0%
TGTTGGAGTGAGAATGAAGA+TGG - chr7_3:87281558-87281577 None:intergenic 40.0%
TCTTCATTCTCACTCCAACA+TGG + chr7_3:87281558-87281577 Msa1133660:exon 40.0%
! GAAGAAAGTGGATTCGGATT+TGG - chr7_3:87281617-87281636 None:intergenic 40.0%
TCCGAATCCACTTTCTTCTT+CGG + chr7_3:87281619-87281638 Msa1133660:CDS 40.0%
! TCCGAAGAAGAAAGTGGATT+CGG - chr7_3:87281623-87281642 None:intergenic 40.0%
! TGTTTGGAATTTGAGGTGGT+TGG - chr7_3:87281653-87281672 None:intergenic 40.0%
!! AATGGTGTTGATTTGGGATG+CGG - chr7_3:87281722-87281741 None:intergenic 40.0%
AAAGCATGGCGAAAAATCCA+CGG + chr7_3:87281802-87281821 Msa1133660:CDS 40.0%
AAATCCACGGTGAAGATGAT+TGG + chr7_3:87281815-87281834 Msa1133660:CDS 40.0%
AATCCACGGTGAAGATGATT+GGG + chr7_3:87281816-87281835 Msa1133660:CDS 40.0%
!! TTCTCCGTAACGGATTAGTT+CGG - chr7_3:87281878-87281897 None:intergenic 40.0%
CAAATGCATCATAACAGGCT+TGG - chr7_3:87281906-87281925 None:intergenic 40.0%
GATGGGAAAAATTCAAGGTG+TGG - chr7_3:87281970-87281989 None:intergenic 40.0%
TGTGTGGAAGATCTAACGAT+GGG - chr7_3:87281987-87282006 None:intergenic 40.0%
ATGTGTGGAAGATCTAACGA+TGG - chr7_3:87281988-87282007 None:intergenic 40.0%
TCGTTAGATCTTCCACACAT+AGG + chr7_3:87281988-87282007 Msa1133660:CDS 40.0%
CGTTAGATCTTCCACACATA+GGG + chr7_3:87281989-87282008 Msa1133660:CDS 40.0%
CTCGATGGCCAGATAAATAT+TGG + chr7_3:87282076-87282095 Msa1133660:CDS 40.0%
! GCAGAGACATTGTTATTGCT+TGG + chr7_3:87282414-87282433 Msa1133660:CDS 40.0%
AACCGTTACTCATGTCGAAT+GGG + chr7_3:87282442-87282461 Msa1133660:CDS 40.0%
TACCCATTCGACATGAGTAA+CGG - chr7_3:87282447-87282466 None:intergenic 40.0%
! TCCGCAAGAGAACAAGTTTT+AGG + chr7_3:87282596-87282615 Msa1133660:CDS 40.0%
! CCCTAAAACTTGTTCTCTTG+CGG - chr7_3:87282600-87282619 None:intergenic 40.0%
! CCGCAAGAGAACAAGTTTTA+GGG + chr7_3:87282597-87282616 Msa1133660:CDS 40.0%
!! CGCAAGAGAACAAGTTTTAG+GGG + chr7_3:87282598-87282617 Msa1133660:CDS 40.0%
!!! AAGTTTTAGGGGAAGTGAGA+AGG + chr7_3:87282609-87282628 Msa1133660:CDS 40.0%
ACGTTAACGGGACATAGTTT+AGG + chr7_3:87282668-87282687 Msa1133660:CDS 40.0%
GCGTTTGATATAGCAGAAAC+AGG + chr7_3:87282713-87282732 Msa1133660:CDS 40.0%
AATTTCATGTTCCCAACCCT+AGG - chr7_3:87282797-87282816 None:intergenic 40.0%
GGGAGATTGGAGAAACATTT+AGG + chr7_3:87282821-87282840 Msa1133660:CDS 40.0%
ATAAGAAACCCTGGTGACTT+TGG - chr7_3:87282887-87282906 None:intergenic 40.0%
TTAATGAGAAATCGCCTGAG+TGG + chr7_3:87282906-87282925 Msa1133660:CDS 40.0%
TGTTGGAGTTGAGTTAGAGT+TGG + chr7_3:87282976-87282995 Msa1133660:CDS 40.0%
CATTGGGCTTACTATTCAAG+GGG - chr7_3:87283317-87283336 None:intergenic 40.0%
CTCATTGGGCTTACTATTCA+AGG - chr7_3:87283319-87283338 None:intergenic 40.0%
! GAGCAGAAAGCACATAAAAG+GGG + chr7_3:87283525-87283544 Msa1133660:intron 40.0%
TCGTTATTTATGGCGTCTAG+TGG + chr7_3:87283595-87283614 Msa1133660:intron 40.0%
ACTAACACACAACGATGATC+AGG + chr7_3:87283668-87283687 Msa1133660:intron 40.0%
TGACAACTGAGCTAAGTTCA+CGG - chr7_3:87283984-87284003 None:intergenic 40.0%
TGAACTTAGCTCAGTTGTCA+GGG + chr7_3:87283984-87284003 Msa1133660:intron 40.0%
TGCATAATATATGAAGGGGC+AGG + chr7_3:87284012-87284031 Msa1133660:intron 40.0%
GCATAATATATGAAGGGGCA+GGG + chr7_3:87284013-87284032 Msa1133660:intron 40.0%
CATAATATATGAAGGGGCAG+GGG + chr7_3:87284014-87284033 Msa1133660:intron 40.0%
ATAATATATGAAGGGGCAGG+GGG + chr7_3:87284015-87284034 Msa1133660:intron 40.0%
!! CTTTTGATTCATAGGTCGTG+GGG - chr7_3:87284343-87284362 None:intergenic 40.0%
!! GCTTTTGATTCATAGGTCGT+GGG - chr7_3:87284344-87284363 None:intergenic 40.0%
!! TGCTTTTGATTCATAGGTCG+TGG - chr7_3:87284345-87284364 None:intergenic 40.0%
TAGTGGTTGCTTCATATCCA+CGG - chr7_3:87284468-87284487 None:intergenic 40.0%
CAAAGCAATGTCCCTATTAG+TGG - chr7_3:87284485-87284504 None:intergenic 40.0%
CACTAATAGGGACATTGCTT+TGG + chr7_3:87284483-87284502 Msa1133660:CDS 40.0%
GGACATTGCTTTGGTGAATA+AGG + chr7_3:87284492-87284511 Msa1133660:CDS 40.0%
AAATCTTGCCTCCAATTTGG+TGG - chr7_3:87284550-87284569 None:intergenic 40.0%
AATATGGTGAAGACCGAAGA+TGG + chr7_3:87284577-87284596 Msa1133660:CDS 40.0%
GATGAGTATCTGCAAGTTGT+GGG - chr7_3:87284624-87284643 None:intergenic 40.0%
TGATGAGTATCTGCAAGTTG+TGG - chr7_3:87284625-87284644 None:intergenic 40.0%
AGTCCTATCTGAGAGAGATA+AGG - chr7_3:87284661-87284680 None:intergenic 40.0%
GGAGTCTTGCTGAATTGAGT+AGG - chr7_3:87281524-87281543 None:intergenic 45.0%
! ATGAAGATGGAGTTTGGAGC+TGG - chr7_3:87281545-87281564 None:intergenic 45.0%
AGAGATTGATGCAGCCATGT+TGG - chr7_3:87281575-87281594 None:intergenic 45.0%
! AGTGGATTCGGATTTGGGAA+AGG - chr7_3:87281611-87281630 None:intergenic 45.0%
!! GGGTTTGTGGGTTTGTTGTT+TGG - chr7_3:87281669-87281688 None:intergenic 45.0%
! TTGGGATGCGGAACATTTTG+TGG - chr7_3:87281710-87281729 None:intergenic 45.0%
GGTTGGACTTCTAGATCCAA+TGG + chr7_3:87281837-87281856 Msa1133660:CDS 45.0%
GATCGCATTATTGGGTCCAT+TGG - chr7_3:87281856-87281875 None:intergenic 45.0%
CGATCCGAACTAATCCGTTA+CGG + chr7_3:87281871-87281890 Msa1133660:CDS 45.0%
! CTTGGGACTTTTCTCCGTAA+CGG - chr7_3:87281888-87281907 None:intergenic 45.0%
GTTACGTCATACCCTATGTG+TGG - chr7_3:87282003-87282022 None:intergenic 45.0%
! TGGGACGTTAACATTTGCTG+TGG - chr7_3:87282040-87282059 None:intergenic 45.0%
! GACATTGTTATTGCTTGGCG+AGG + chr7_3:87282419-87282438 Msa1133660:CDS 45.0%
GAACCGTTACTCATGTCGAA+TGG + chr7_3:87282441-87282460 Msa1133660:CDS 45.0%
TGTCCGGACAAGGAATATCT+TGG - chr7_3:87282502-87282521 None:intergenic 45.0%
! TCATTTTCTGGACCTAGGGT+TGG + chr7_3:87282782-87282801 Msa1133660:CDS 45.0%
! CATTTTCTGGACCTAGGGTT+GGG + chr7_3:87282783-87282802 Msa1133660:CDS 45.0%
! ATATGGTGCCAAAGTCACCA+GGG + chr7_3:87282876-87282895 Msa1133660:CDS 45.0%
CCAACATGAGTGTAACACCA+TGG - chr7_3:87282962-87282981 None:intergenic 45.0%
!! CCATGGTGTTACACTCATGT+TGG + chr7_3:87282959-87282978 Msa1133660:CDS 45.0%
TGCTGCATGTGCTCATAACT+TGG + chr7_3:87283036-87283055 Msa1133660:CDS 45.0%
TGCATGTGCTCATAACTTGG+AGG + chr7_3:87283039-87283058 Msa1133660:CDS 45.0%
ATAAAAGGGGACCAGTTGTC+CGG + chr7_3:87283538-87283557 Msa1133660:intron 45.0%
ATTCCGACCTATCCACTTCA+CGG + chr7_3:87283740-87283759 Msa1133660:intron 45.0%
TTAAGACAGTGACCGTGAAG+TGG - chr7_3:87283755-87283774 None:intergenic 45.0%
ACAACTGAGCTAAGTTCACG+GGG - chr7_3:87283982-87284001 None:intergenic 45.0%
GACAACTGAGCTAAGTTCAC+GGG - chr7_3:87283983-87284002 None:intergenic 45.0%
GTGAACTTAGCTCAGTTGTC+AGG + chr7_3:87283983-87284002 Msa1133660:intron 45.0%
TATGGAGAAGTGGTGTGTCT+GGG - chr7_3:87284048-87284067 None:intergenic 45.0%
ATATGGAGAAGTGGTGTGTC+TGG - chr7_3:87284049-87284068 None:intergenic 45.0%
!! TTGATGATGAGCAGGTACCA+TGG + chr7_3:87284436-87284455 Msa1133660:intron 45.0%
! TGATGATGAGCAGGTACCAT+GGG + chr7_3:87284437-87284456 Msa1133660:intron 45.0%
! GAGCCTTATCTCTCTCAGAT+AGG + chr7_3:87284655-87284674 Msa1133660:CDS 45.0%
! GGGAACTTGATGGATGTAAG+TGG - chr7_3:87284861-87284880 None:intergenic 45.0%
!! AAATATATATAAGAAATAAT+TGG + chr7_3:87282224-87282243 Msa1133660:intron 5.0%
!!! TTTTTAAATATTTCTAAAAA+TGG - chr7_3:87283185-87283204 None:intergenic 5.0%
!! AAAAAAATAGTATTAAAATT+TGG - chr7_3:87283362-87283381 None:intergenic 5.0%
!! AAACTAAAAAATTTAAATAT+GGG + chr7_3:87283404-87283423 Msa1133660:intron 5.0%
CAACCCAATCATCTTCACCG+TGG - chr7_3:87281822-87281841 None:intergenic 50.0%
CACGGTGAAGATGATTGGGT+TGG + chr7_3:87281820-87281839 Msa1133660:CDS 50.0%
ATTGGAGCGAACACGCGAAT+TGG + chr7_3:87282094-87282113 Msa1133660:CDS 50.0%
AGCGAACACGCGAATTGGAT+GGG + chr7_3:87282099-87282118 Msa1133660:CDS 50.0%
TCTACTCGAACGTCGTTGTC+CGG - chr7_3:87282518-87282537 None:intergenic 50.0%
AACGACGTTCGAGTAGAAGC+AGG + chr7_3:87282521-87282540 Msa1133660:CDS 50.0%
! GATATGGTGCCAAAGTCACC+AGG + chr7_3:87282875-87282894 Msa1133660:CDS 50.0%
GCACATGCAGCATCAGCATT+AGG - chr7_3:87283028-87283047 None:intergenic 50.0%
CCCATCGAGTATGTGCAAGT+GGG - chr7_3:87283065-87283084 None:intergenic 50.0%
CCCACTTGCACATACTCGAT+GGG + chr7_3:87283062-87283081 Msa1133660:CDS 50.0%
ACCCATCGAGTATGTGCAAG+TGG - chr7_3:87283066-87283085 None:intergenic 50.0%
TAGGATTCTTGCCGGACAAC+TGG - chr7_3:87283552-87283571 None:intergenic 50.0%
TCGGAATGGAGGTCTCTTTG+TGG - chr7_3:87283727-87283746 None:intergenic 50.0%
AAGTGGATAGGTCGGAATGG+AGG - chr7_3:87283738-87283757 None:intergenic 50.0%
GTGAAGTGGATAGGTCGGAA+TGG - chr7_3:87283741-87283760 None:intergenic 50.0%
TGACCGTGAAGTGGATAGGT+CGG - chr7_3:87283746-87283765 None:intergenic 50.0%
ACAGTGACCGTGAAGTGGAT+AGG - chr7_3:87283750-87283769 None:intergenic 50.0%
ATGGAGAAGTGGTGTGTCTG+GGG - chr7_3:87284047-87284066 None:intergenic 50.0%
ATGTGTGAGCTCCAGTCACT+AGG + chr7_3:87284074-87284093 Msa1133660:intron 50.0%
TGGTCAAGTAGCCTAGTGAC+TGG - chr7_3:87284088-87284107 None:intergenic 50.0%
AGCACTCTGTGCCACCAAAT+TGG + chr7_3:87284536-87284555 Msa1133660:CDS 50.0%
ACTCTGTGCCACCAAATTGG+AGG + chr7_3:87284539-87284558 Msa1133660:CDS 50.0%
TGAAGACCGAAGATGGACGT+TGG + chr7_3:87284584-87284603 Msa1133660:CDS 50.0%
GAAGACCGAAGATGGACGTT+GGG + chr7_3:87284585-87284604 Msa1133660:CDS 50.0%
! GATGCTTGGAGAGTGTACGT+TGG - chr7_3:87284811-87284830 None:intergenic 50.0%
GAGCGAACACGCGAATTGGA+TGG + chr7_3:87282098-87282117 Msa1133660:CDS 55.0%
GCCCACTTGCACATACTCGA+TGG + chr7_3:87283061-87283080 Msa1133660:CDS 55.0%
CATATCCACGGTTGCTCCCA+TGG - chr7_3:87284456-87284475 None:intergenic 55.0%
CAGCACCCAACGTCCATCTT+CGG - chr7_3:87284593-87284612 None:intergenic 55.0%
CGAACGTCGTTGTCCGGACA+AGG - chr7_3:87282512-87282531 None:intergenic 60.0%
AGGTACCATGGGAGCAACCG+TGG + chr7_3:87284448-87284467 Msa1133660:intron 60.0%
CGAAGATGGACGTTGGGTGC+TGG + chr7_3:87284591-87284610 Msa1133660:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 87281521 87285036 87281521 ID=Msa1133660;Name=Msa1133660
chr7_3 mRNA 87281521 87285036 87281521 ID=Msa1133660-mRNA-1;Parent=Msa1133660;Name=Msa1133660-mRNA-1;_AED=0.20;_eAED=0.20;_QI=56|1|1|1|1|1|3|334|503
chr7_3 exon 87281521 87282162 87281521 ID=Msa1133660-mRNA-1:exon:26276;Parent=Msa1133660-mRNA-1
chr7_3 exon 87282411 87283083 87282411 ID=Msa1133660-mRNA-1:exon:26277;Parent=Msa1133660-mRNA-1
chr7_3 exon 87284450 87285036 87284450 ID=Msa1133660-mRNA-1:exon:26278;Parent=Msa1133660-mRNA-1
chr7_3 five_prime_UTR 87281521 87281576 87281521 ID=Msa1133660-mRNA-1:five_prime_utr;Parent=Msa1133660-mRNA-1
chr7_3 CDS 87281577 87282162 87281577 ID=Msa1133660-mRNA-1:cds;Parent=Msa1133660-mRNA-1
chr7_3 CDS 87282411 87283083 87282411 ID=Msa1133660-mRNA-1:cds;Parent=Msa1133660-mRNA-1
chr7_3 CDS 87284450 87284702 87284450 ID=Msa1133660-mRNA-1:cds;Parent=Msa1133660-mRNA-1
chr7_3 three_prime_UTR 87284703 87285036 87284703 ID=Msa1133660-mRNA-1:three_prime_utr;Parent=Msa1133660-mRNA-1
Gene Sequence

>Msa1133660

ATGGCTGCATCAATCTCTAACATGTTCATAGCCTTTCCCAAATCCGAATCCACTTTCTTCTTCGGATTCAATTCCAACCACCTCAAATTCCAAACAACAAACCCACAAACCCTAACAACAAAAAAACTCACCACAAAATGTTCCGCATCCCAAATCAACACCATTACACAACTCCAATCACAAAACACAAAACAATCATCAAAACTAACCGAACTTCCCATAGAAAAAGCATGGCGAAAAATCCACGGTGAAGATGATTGGGTTGGACTTCTAGATCCAATGGACCCAATAATGCGATCCGAACTAATCCGTTACGGAGAAAAGTCCCAAGCCTGTTATGATGCATTTGATTTTGATCCATATTCAAAATATTGTGGTAGTTGCAAACACCCACACCTTGAATTTTTCCCATCGTTAGATCTTCCACACATAGGGTATGACGTAACACGCTACCTATATGCCACAGCAAATGTTAACGTCCCAGATTTCTTTAAGAAATCTCGATGGCCAGATAAATATTGGAGCGAACACGCGAATTGGATGGGATACATAGCCGTTTCAAACGATGAAGCAACACAAAAAATCGGTCGCAGAGACATTGTTATTGCTTGGCGAGGAACCGTTACTCATGTCGAATGGGTAGCCAATCTTCAAAATTACCTTAAACCTCTTTACCAAGATATTCCTTGTCCGGACAACGACGTTCGAGTAGAAGCAGGTTTTCTCGATATGTACACCGATAGACTCAAAAAAGACGGTTATTGTAAATATTCCGCAAGAGAACAAGTTTTAGGGGAAGTGAGAAGGTTGTTAGCGAAATTTCCTGATGAAGAAGTTAGTATTACGTTAACGGGACATAGTTTAGGAAGTGCTATGGCTACATTAAGTGCGTTTGATATAGCAGAAACAGGGTTAAATGTTAGGGAAAATGGTGAAAAAATCCATGTTTCTGTTTTTTCATTTTCTGGACCTAGGGTTGGGAACATGAAATTTAAAGGGAGATTGGAGAAACATTTAGGGGTTAAGATTTTGAGGGTTCATAATAAGCATGATATGGTGCCAAAGTCACCAGGGTTTCTTATTAATGAGAAATCGCCTGAGTGGTTATTAAAGTTTGCTGAGGATATTGATATTCCATGGTGTTACACTCATGTTGGAGTTGAGTTAGAGTTGGACCACAAGATTTCTCCATTTTTGAATCCTAATGCTGATGCTGCATGTGCTCATAACTTGGAGGCCCACTTGCACATACTCGATGGGTACCATGGGAGCAACCGTGGATATGAAGCAACCACTAATAGGGACATTGCTTTGGTGAATAAGGCTTGTGACTTTGTGAAAGATGAGCACTCTGTGCCACCAAATTGGAGGCAAGATTTGAATAGGAATATGGTGAAGACCGAAGATGGACGTTGGGTGCTGGCTCAACGCCCACAACTTGCAGATACTCATCATGAAGACATTGAGCCTTATCTCTCTCAGATAGGACTCATCTCTTCATCTAATAAATAA

Protein sequence

>Msa1133660

MAASISNMFIAFPKSESTFFFGFNSNHLKFQTTNPQTLTTKKLTTKCSASQINTITQLQSQNTKQSSKLTELPIEKAWRKIHGEDDWVGLLDPMDPIMRSELIRYGEKSQACYDAFDFDPYSKYCGSCKHPHLEFFPSLDLPHIGYDVTRYLYATANVNVPDFFKKSRWPDKYWSEHANWMGYIAVSNDEATQKIGRRDIVIAWRGTVTHVEWVANLQNYLKPLYQDIPCPDNDVRVEAGFLDMYTDRLKKDGYCKYSAREQVLGEVRRLLAKFPDEEVSITLTGHSLGSAMATLSAFDIAETGLNVRENGEKIHVSVFSFSGPRVGNMKFKGRLEKHLGVKILRVHNKHDMVPKSPGFLINEKSPEWLLKFAEDIDIPWCYTHVGVELELDHKISPFLNPNADAACAHNLEAHLHILDGYHGSNRGYEATTNRDIALVNKACDFVKDEHSVPPNWRQDLNRNMVKTEDGRWVLAQRPQLADTHHEDIEPYLSQIGLISSSNK*