AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0123170


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0123170 MtrunA17_Chr1g0183791 93.801 371 22 1 1 370 1 371 0.0 699
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0123170 AT1G06190.1 36.427 431 173 13 1 367 3 396 1.28e-46 164
Msa0123170 AT1G06190.5 36.215 428 170 14 4 367 11 399 2.39e-45 160
Msa0123170 AT1G06190.2 42.391 276 104 9 1 253 3 246 8.53e-37 135
Msa0123170 AT1G06190.3 36.223 323 118 8 104 367 1 294 6.33e-32 122
Msa0123170 AT1G06190.4 36.223 323 118 8 104 367 1 294 6.33e-32 122
Msa0123170 AT2G31150.1 40.526 190 77 8 69 252 28 187 1.02e-17 83.2

Find 103 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGATCTCCCTTCTTCATTT+TGG 0.199446 1_3:-50080526 None:intergenic
ATTCATTCTCATGTCAAAAT+TGG 0.207354 1_3:+50079595 Msa0123170:CDS
AGGAGATTGTTGAATTATTT+AGG 0.215094 1_3:+50079851 Msa0123170:CDS
ATCCACACCCTCATTATTAT+AGG 0.236533 1_3:-50080412 None:intergenic
CACTGAAGATGTCTGAATTA+AGG 0.272149 1_3:+50080469 Msa0123170:CDS
CAACAGAGTGTTTCTTCAAT+AGG 0.293426 1_3:-50079981 None:intergenic
TTCCCATGCTCACGTGGTTT+TGG 0.314381 1_3:+50079526 Msa0123170:CDS
GAATCATCATCAGAAAATTC+AGG 0.322009 1_3:-50080372 None:intergenic
GTGGAACAGGAGACTTTCTT+TGG 0.339277 1_3:-50080179 None:intergenic
CATGGGAAACACTTGTCTTC+TGG 0.354566 1_3:-50079511 None:intergenic
CTTGCAACTGGTCAGAGTTA+AGG 0.357514 1_3:-50080044 None:intergenic
TCATTATCTTCAGTATCTAT+TGG 0.361803 1_3:-50080252 None:intergenic
GGTCATCAAGAGGCAGAAAT+AGG 0.364129 1_3:+50079704 Msa0123170:CDS
CCTGAATTATGCGATACTAA+TGG 0.364548 1_3:-50079790 None:intergenic
CTCATTATTATAGGTTTGTT+CGG 0.368039 1_3:-50080403 None:intergenic
AGAAGCCAACATTGCTTCTT+CGG 0.370636 1_3:+50080137 Msa0123170:CDS
ATTGGTTACTTTCTTGCAAC+TGG 0.376988 1_3:-50080056 None:intergenic
GCTTCTCGAGACTCGCCCTT+TGG 0.377737 1_3:-50080120 None:intergenic
CAAGAAAGTAACCAATATAA+TGG 0.383785 1_3:+50080063 Msa0123170:CDS
ATCTCCTTCTCTCTGGGGCC+AGG 0.383899 1_3:-50079835 None:intergenic
CCATTAGTATCGCATAATTC+AGG 0.386197 1_3:+50079790 Msa0123170:CDS
TGAAGATAATGAGAACATTC+AGG 0.393307 1_3:+50080263 Msa0123170:CDS
TCTCCTTCTCTCTGGGGCCA+GGG 0.398569 1_3:-50079834 None:intergenic
ACTGAAGATGTCTGAATTAA+GGG 0.399378 1_3:+50080470 Msa0123170:CDS
TTCAACAATCTCCTTCTCTC+TGG 0.400512 1_3:-50079842 None:intergenic
TCAATGTCAGACACAAGTTT+AGG 0.403640 1_3:-50080321 None:intergenic
AAAATTGGAGGACTAAAGTA+TGG 0.407218 1_3:+50079610 Msa0123170:CDS
GATATACTAACCGACGTTGT+TGG 0.409422 1_3:-50077000 None:intergenic
ATTTCTCAAGGCAAAACAAT+AGG 0.425700 1_3:+50079677 Msa0123170:CDS
TTGCTTCTTCGGCTCGGCCT+CGG 0.432797 1_3:+50080148 Msa0123170:CDS
TACACTCGAACCCAGGTGAT+TGG 0.433213 1_3:-50080720 None:intergenic
TCTGGGGCCAGGGGATGAAG+TGG 0.433553 1_3:-50079824 None:intergenic
GAGAACTGATTCTGAGTAAA+CGG 0.437225 1_3:+50080564 Msa0123170:exon
TCACCGTGTCTTTGCCTTGG+TGG 0.442141 1_3:+50080760 Msa0123170:three_prime_UTR
AGTCTCCTGTTCCACGTGTT+AGG 0.449557 1_3:+50080187 Msa0123170:CDS
CTCCTTCTCTCTGGGGCCAG+GGG 0.453590 1_3:-50079833 None:intergenic
CCAGCCTCTCTCTAATAACT+TGG 0.465102 1_3:+50080212 Msa0123170:CDS
CATTCTCATGTCAAAATTGG+AGG 0.466208 1_3:+50079598 Msa0123170:CDS
TGGTACCTAACACGTGGAAC+AGG 0.468633 1_3:-50080192 None:intergenic
GCATAATTCAGGAAAATTCC+AGG 0.470969 1_3:+50079801 Msa0123170:CDS
CCAAGTTATTAGAGAGAGGC+TGG 0.475081 1_3:-50080212 None:intergenic
GGCAGAAATAGGAACGATGA+TGG 0.476321 1_3:+50079715 Msa0123170:CDS
GTATATTCATGCACTTCTCT+AGG 0.477464 1_3:+50079562 Msa0123170:CDS
GAGCAAGGAAAGAGAAGTAA+TGG 0.479561 1_3:+50080003 Msa0123170:CDS
TCAGACACAAGTTTAGGTTC+TGG 0.480757 1_3:-50080315 None:intergenic
TCAACAATCTCCTTCTCTCT+GGG 0.484672 1_3:-50079841 None:intergenic
TTCTGATTCAGGTGCTCCAA+AGG 0.490898 1_3:+50080104 Msa0123170:CDS
GGCCAGGGGATGAAGTGGCC+TGG 0.491170 1_3:-50079819 None:intergenic
CAAAGTCTCGTGGCGTGAAA+GGG 0.496245 1_3:+50080499 Msa0123170:CDS
GCAAAGTCTCGTGGCGTGAA+AGG 0.497859 1_3:+50080498 Msa0123170:CDS
CACCTGGGTTCGAGTGTAGT+TGG 0.509604 1_3:+50080725 Msa0123170:three_prime_UTR
CGAACAAACCTATAATAATG+AGG 0.509607 1_3:+50080404 Msa0123170:CDS
TTCAAGCTCGGTTGCGTGAG+AGG 0.514959 1_3:+50079878 Msa0123170:CDS
CTTCCAAAACCACGTGAGCA+TGG 0.519268 1_3:-50079529 None:intergenic
TTCCAGGCCACTTCATCCCC+TGG 0.519556 1_3:+50079817 Msa0123170:CDS
AATCATCATCAGAAAATTCA+GGG 0.519668 1_3:-50080371 None:intergenic
AGGGTTCTCCAAAATGAAGA+AGG 0.519774 1_3:+50080518 Msa0123170:CDS
TAATCACCGTGTCTTTGCCT+TGG 0.522201 1_3:+50080757 Msa0123170:three_prime_UTR
TTCCAAAACCACGTGAGCAT+GGG 0.524758 1_3:-50079528 None:intergenic
AACCTATAATAATGAGGGTG+TGG 0.526342 1_3:+50080410 Msa0123170:CDS
AGAAGTAATGGAGAGGACGA+TGG 0.534478 1_3:+50080015 Msa0123170:CDS
TCTGATTCAGGTGCTCCAAA+GGG 0.540137 1_3:+50080105 Msa0123170:CDS
ATCCCCTGGCCCCAGAGAGA+AGG 0.545660 1_3:+50079831 Msa0123170:CDS
TCAAGGCAAAACAATAGGCA+TGG 0.548267 1_3:+50079682 Msa0123170:CDS
CCGAGCCGAAGAAGCAATGT+TGG 0.549322 1_3:-50080142 None:intergenic
AGTGTTTCTTCAATAGGTTG+AGG 0.554093 1_3:-50079975 None:intergenic
CCAACATTGCTTCTTCGGCT+CGG 0.556816 1_3:+50080142 Msa0123170:CDS
TATTTAGGAAAGTTCAAGCT+CGG 0.557831 1_3:+50079866 Msa0123170:CDS
GCATGTAGTGGTTCAAAATG+AGG 0.559809 1_3:+50080437 Msa0123170:CDS
TTTGCTCTTTAACATGCCCT+CGG 0.561148 1_3:-50079936 None:intergenic
AAAGTAACCAATATAATGGA+AGG 0.561546 1_3:+50080067 Msa0123170:CDS
TTTCTTCAATAGGTTGAGGA+GGG 0.570516 1_3:-50079971 None:intergenic
AATATTCCGATCCAATCACC+TGG 0.571803 1_3:+50080709 Msa0123170:three_prime_UTR
GTTTCTTCAATAGGTTGAGG+AGG 0.572179 1_3:-50079972 None:intergenic
GACCAACTACACTCGAACCC+AGG 0.586299 1_3:-50080727 None:intergenic
GCAGAAATAGGAACGATGAT+GGG 0.587866 1_3:+50079716 Msa0123170:CDS
ATCATCAGAAAATTCAGGGA+AGG 0.590377 1_3:-50080367 None:intergenic
AAGGAAAAGTAATACTAGAA+CGG 0.591425 1_3:+50080593 Msa0123170:three_prime_UTR
AAGAAACACTCTGTTGAGCA+AGG 0.591435 1_3:+50079988 Msa0123170:CDS
AAGTGTTTCCCATGCTCACG+TGG 0.592511 1_3:+50079520 Msa0123170:CDS
GAACAAACCTATAATAATGA+GGG 0.596913 1_3:+50080405 Msa0123170:CDS
AATGAAGAAGGGAGATCTCG+TGG 0.596961 1_3:+50080530 Msa0123170:CDS
AGAAAGTTGAAGCACGCCGA+GGG 0.601504 1_3:+50079920 Msa0123170:CDS
TCTGAGTAAACGGTACGAGA+AGG 0.608360 1_3:+50080574 Msa0123170:three_prime_UTR
CTCATCGTCGCCAACAACGT+CGG 0.614579 1_3:+50076990 Msa0123170:CDS
CAAGGCAAAACAATAGGCAT+GGG 0.615186 1_3:+50079683 Msa0123170:CDS
GGGTTCTCCAAAATGAAGAA+GGG 0.625338 1_3:+50080519 Msa0123170:CDS
AAACATCTAGTTAAAAGCAG+AGG 0.628546 1_3:-50080649 None:intergenic
TCGAACCCAGGTGATTGGAT+CGG 0.631164 1_3:-50080715 None:intergenic
TCAGCCAAGTTATTAGAGAG+AGG 0.631266 1_3:-50080216 None:intergenic
AATAGGCATGGGTCATCAAG+AGG 0.632902 1_3:+50079694 Msa0123170:CDS
TGACATTGATCTTGATACAA+AGG 0.632946 1_3:+50080335 Msa0123170:CDS
GGAGGAACTCAGATTTCTCA+AGG 0.637151 1_3:+50079665 Msa0123170:CDS
AGGACTAAAGTATGGTTCAA+CGG 0.640774 1_3:+50079618 Msa0123170:CDS
AGGGCACTTGCAAAGTCTCG+TGG 0.643518 1_3:+50080489 Msa0123170:CDS
TTTCTTTGGAAAACTGACCG+AGG 0.646782 1_3:-50080165 None:intergenic
AAGAAAGTTGAAGCACGCCG+AGG 0.654479 1_3:+50079919 Msa0123170:CDS
AGGAAAGAGAAGTAATGGAG+AGG 0.667328 1_3:+50080008 Msa0123170:CDS
CAACAATCTCCTTCTCTCTG+GGG 0.674813 1_3:-50079840 None:intergenic
GGGTGTGGATGAGCATGTAG+TGG 0.698167 1_3:+50080425 Msa0123170:CDS
AAACCACCAAGGCAAAGACA+CGG 0.700646 1_3:-50080763 None:intergenic
AGAGGCTGGTACCTAACACG+TGG 0.705728 1_3:-50080198 None:intergenic
ATATTCCGATCCAATCACCT+GGG 0.713097 1_3:+50080710 Msa0123170:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATATTAAAACAATTAG+TGG - chr1_3:50077768-50077787 None:intergenic 10.0%
!! TAAAAAAAGAAAAATATTTG+AGG + chr1_3:50078296-50078315 Msa0123170:intron 10.0%
!! GATGATTATGATTAAAATTT+GGG + chr1_3:50077501-50077520 Msa0123170:intron 15.0%
!! TCATGTTCAATTATTAAAAA+TGG + chr1_3:50077602-50077621 Msa0123170:intron 15.0%
!! CATGTTCAATTATTAAAAAT+GGG + chr1_3:50077603-50077622 Msa0123170:intron 15.0%
!! AAATGCATATTAAATTGTAA+TGG + chr1_3:50078096-50078115 Msa0123170:intron 15.0%
!! AATATATTTGAGGATTAAAT+TGG - chr1_3:50078485-50078504 None:intergenic 15.0%
!! AACAATGAAAAATATATTTG+AGG - chr1_3:50078495-50078514 None:intergenic 15.0%
!! TTAAAAACCGTATATTCAAT+TGG + chr1_3:50077165-50077184 Msa0123170:intron 20.0%
!! TAAAAACCGTATATTCAATT+GGG + chr1_3:50077166-50077185 Msa0123170:intron 20.0%
!! AATAAACCCAATTGAATATA+CGG - chr1_3:50077175-50077194 None:intergenic 20.0%
!!! TTTGTTTTTTCAATTAGTTG+CGG + chr1_3:50077198-50077217 Msa0123170:intron 20.0%
!!! TTTATTGCCTATTATTTTCT+GGG + chr1_3:50077245-50077264 Msa0123170:intron 20.0%
!! GGTTAATATATGTCAAATAT+TGG - chr1_3:50077317-50077336 None:intergenic 20.0%
!! TATTTGACATATATTAACCT+TGG + chr1_3:50077318-50077337 Msa0123170:intron 20.0%
!! GGATGATTATGATTAAAATT+TGG + chr1_3:50077500-50077519 Msa0123170:intron 20.0%
!!! AAAATCTTGTTTTTCCATAA+GGG - chr1_3:50077629-50077648 None:intergenic 20.0%
!!! AAAAATCTTGTTTTTCCATA+AGG - chr1_3:50077630-50077649 None:intergenic 20.0%
!! TAAGTAAAAGTAAGTTTGTA+TGG + chr1_3:50077708-50077727 Msa0123170:intron 20.0%
!! AAGTAAAAGTAAGTTTGTAT+GGG + chr1_3:50077709-50077728 Msa0123170:intron 20.0%
!! AAATGGATCTTTAAGTATAT+AGG + chr1_3:50077851-50077870 Msa0123170:intron 20.0%
!! ATGTAATTGAGACTTATATT+TGG + chr1_3:50078133-50078152 Msa0123170:intron 20.0%
!!! TTTTTAATTACAGGACATTT+AGG + chr1_3:50078560-50078579 Msa0123170:intron 20.0%
!! TCAAAAATTGTATTGAATGA+GGG + chr1_3:50078722-50078741 Msa0123170:intron 20.0%
!! GAGATTTATTCAACTAAAAA+GGG - chr1_3:50079010-50079029 None:intergenic 20.0%
!! AGAGATTTATTCAACTAAAA+AGG - chr1_3:50079011-50079030 None:intergenic 20.0%
!! GATATGTTATCTTCAAAAAA+TGG + chr1_3:50079766-50079785 Msa0123170:CDS 20.0%
!! AGAACAATTTTGAATCAAAG+AGG - chr1_3:50077032-50077051 None:intergenic 25.0%
!! ATTAGTATTGAAAAAACCCT+TGG + chr1_3:50077080-50077099 Msa0123170:intron 25.0%
!! CTTTATTGCCTATTATTTTC+TGG + chr1_3:50077244-50077263 Msa0123170:intron 25.0%
! TCATTTACCCAGAAAATAAT+AGG - chr1_3:50077255-50077274 None:intergenic 25.0%
!! TCACTTTGTTTAGTACAAAA+TGG + chr1_3:50077834-50077853 Msa0123170:intron 25.0%
! TGACAAACTAGTACTAATAT+CGG + chr1_3:50077914-50077933 Msa0123170:intron 25.0%
!!! GATTTAATTTGTGCTGTTAA+TGG + chr1_3:50078014-50078033 Msa0123170:intron 25.0%
! GACATCTTGTAATAGTTTAT+TGG - chr1_3:50078224-50078243 None:intergenic 25.0%
!! TTATATACACCTAACACTTT+TGG + chr1_3:50078264-50078283 Msa0123170:intron 25.0%
! GATTCATAGACTATACTATA+GGG - chr1_3:50078388-50078407 None:intergenic 25.0%
! AGATTCATAGACTATACTAT+AGG - chr1_3:50078389-50078408 None:intergenic 25.0%
!! CTCTTTTGTAAGTAAGTTTA+GGG - chr1_3:50078527-50078546 None:intergenic 25.0%
!!! CAGAGATTGTTTTTAATTAC+AGG + chr1_3:50078551-50078570 Msa0123170:intron 25.0%
! CTCAAAAATTGTATTGAATG+AGG + chr1_3:50078721-50078740 Msa0123170:intron 25.0%
! GTTAGAAATATACGGAAAAA+TGG - chr1_3:50078885-50078904 None:intergenic 25.0%
! AATAGTGTATCACATATTCT+AGG + chr1_3:50078967-50078986 Msa0123170:intron 25.0%
! TAAATCAATGGTGATAAAAG+AGG + chr1_3:50079053-50079072 Msa0123170:intron 25.0%
! AAAATGTACTCCATCATAAA+GGG - chr1_3:50079091-50079110 None:intergenic 25.0%
! TAAAATGTACTCCATCATAA+AGG - chr1_3:50079092-50079111 None:intergenic 25.0%
! TAAAATGCGTTACAAAAAGA+AGG - chr1_3:50079122-50079141 None:intergenic 25.0%
!!! TTTGAGTATCTACTTTTTAC+TGG - chr1_3:50079145-50079164 None:intergenic 25.0%
! AAGAATAAAAAAATCCAGCT+TGG - chr1_3:50079248-50079267 None:intergenic 25.0%
!!! AAGCTGGATTTTTTTATTCT+TGG + chr1_3:50079247-50079266 Msa0123170:intron 25.0%
! AGACATCAAGATAGTTTATA+GGG - chr1_3:50079345-50079364 None:intergenic 25.0%
! TAGACATCAAGATAGTTTAT+AGG - chr1_3:50079346-50079365 None:intergenic 25.0%
! GCATCAAATTATACAAAACA+TGG - chr1_3:50079412-50079431 None:intergenic 25.0%
!! GAGTTAGTTTGATATATTTC+AGG + chr1_3:50079478-50079497 Msa0123170:intron 25.0%
! ATTCATTCTCATGTCAAAAT+TGG + chr1_3:50079595-50079614 Msa0123170:CDS 25.0%
! AGGAGATTGTTGAATTATTT+AGG + chr1_3:50079851-50079870 Msa0123170:CDS 25.0%
! CAAGAAAGTAACCAATATAA+TGG + chr1_3:50080063-50080082 Msa0123170:CDS 25.0%
!! AAAGTAACCAATATAATGGA+AGG + chr1_3:50080067-50080086 Msa0123170:CDS 25.0%
!! AACTCTAAATTTTCTGATTC+AGG + chr1_3:50080093-50080112 Msa0123170:CDS 25.0%
! TCATTATCTTCAGTATCTAT+TGG - chr1_3:50080255-50080274 None:intergenic 25.0%
! AATCATCATCAGAAAATTCA+GGG - chr1_3:50080374-50080393 None:intergenic 25.0%
!! CTCATTATTATAGGTTTGTT+CGG - chr1_3:50080406-50080425 None:intergenic 25.0%
! GAACAAACCTATAATAATGA+GGG + chr1_3:50080405-50080424 Msa0123170:CDS 25.0%
! AAGGAAAAGTAATACTAGAA+CGG + chr1_3:50080593-50080612 Msa0123170:three_prime_UTR 25.0%
!!! CAAAATTTTAAAAACCACCA+AGG - chr1_3:50080777-50080796 None:intergenic 25.0%
GTAAATGATGTTATCTGAGT+GGG + chr1_3:50077267-50077286 Msa0123170:intron 30.0%
ATATGTCAAATATTGGTCAC+AGG - chr1_3:50077310-50077329 None:intergenic 30.0%
CATCTTAAAATTCTACACCA+AGG - chr1_3:50077338-50077357 None:intergenic 30.0%
!!! GGTGTAGAATTTTAAGATGT+AGG + chr1_3:50077339-50077358 Msa0123170:intron 30.0%
AAAACCTAAACCAGAGAAAA+TGG - chr1_3:50077391-50077410 None:intergenic 30.0%
TGTTAAAAGTCAGAACATTG+TGG + chr1_3:50077479-50077498 Msa0123170:intron 30.0%
! AACATGACCTCTGATTTTAT+CGG - chr1_3:50077589-50077608 None:intergenic 30.0%
TTATTAAAAATGGGCCCTTA+TGG + chr1_3:50077612-50077631 Msa0123170:intron 30.0%
TAAAAGTAAGTTTGTATGGG+AGG + chr1_3:50077712-50077731 Msa0123170:intron 30.0%
GACAAACTAGTACTAATATC+GGG + chr1_3:50077915-50077934 Msa0123170:intron 30.0%
TGGTAAAATAGAATGCACTT+GGG - chr1_3:50078204-50078223 None:intergenic 30.0%
TTGGTAAAATAGAATGCACT+TGG - chr1_3:50078205-50078224 None:intergenic 30.0%
!! ATATAGCATCCAAAAGTGTT+AGG - chr1_3:50078276-50078295 None:intergenic 30.0%
! CCTCTTTTGTAAGTAAGTTT+AGG - chr1_3:50078528-50078547 None:intergenic 30.0%
CCTAAACTTACTTACAAAAG+AGG + chr1_3:50078525-50078544 Msa0123170:intron 30.0%
GAACAAGTAGAAGAAATAGA+TGG + chr1_3:50078631-50078650 Msa0123170:intron 30.0%
AATACAAAATCCTCCTCATT+TGG + chr1_3:50078694-50078713 Msa0123170:intron 30.0%
ATACAAAATCCTCCTCATTT+GGG + chr1_3:50078695-50078714 Msa0123170:intron 30.0%
! ATTGTATTGAATGAGGGTTT+TGG + chr1_3:50078728-50078747 Msa0123170:intron 30.0%
TTCGGAAGGTTAGAAATATA+CGG - chr1_3:50078893-50078912 None:intergenic 30.0%
ACTATTACTATCGTCTCTAA+GGG - chr1_3:50078953-50078972 None:intergenic 30.0%
!!! ATGTTTTTTATGACCCTTAG+AGG + chr1_3:50079214-50079233 Msa0123170:intron 30.0%
!!! TGTTTTTTATGACCCTTAGA+GGG + chr1_3:50079215-50079234 Msa0123170:intron 30.0%
TAAAAAAATCCAGCTTGGTA+AGG - chr1_3:50079243-50079262 None:intergenic 30.0%
! TAAGCTGAATTTTCAACAGT+TGG + chr1_3:50079317-50079336 Msa0123170:intron 30.0%
TCTATCATAACTAAACCTAG+AGG + chr1_3:50079362-50079381 Msa0123170:intron 30.0%
TGTAAGGACGAAAAAAGTAA+AGG - chr1_3:50079438-50079457 None:intergenic 30.0%
!! GTTTGATATATTTCAGGTTG+TGG + chr1_3:50079484-50079503 Msa0123170:intron 30.0%
AAAATTGGAGGACTAAAGTA+TGG + chr1_3:50079610-50079629 Msa0123170:CDS 30.0%
ATTTCTCAAGGCAAAACAAT+AGG + chr1_3:50079677-50079696 Msa0123170:CDS 30.0%
TATTTAGGAAAGTTCAAGCT+CGG + chr1_3:50079866-50079885 Msa0123170:CDS 30.0%
! TTTCTTTTCTTCTTTGACAG+TGG - chr1_3:50079905-50079924 None:intergenic 30.0%
! AGTTTTGCCTTCCATTATAT+TGG - chr1_3:50080077-50080096 None:intergenic 30.0%
TGAAGATAATGAGAACATTC+AGG + chr1_3:50080263-50080282 Msa0123170:CDS 30.0%
TGACATTGATCTTGATACAA+AGG + chr1_3:50080335-50080354 Msa0123170:CDS 30.0%
GAATCATCATCAGAAAATTC+AGG - chr1_3:50080375-50080394 None:intergenic 30.0%
CGAACAAACCTATAATAATG+AGG + chr1_3:50080404-50080423 Msa0123170:CDS 30.0%
ACTGAAGATGTCTGAATTAA+GGG + chr1_3:50080470-50080489 Msa0123170:CDS 30.0%
AAACATCTAGTTAAAAGCAG+AGG - chr1_3:50080652-50080671 None:intergenic 30.0%
! AGTATTGAAAAAACCCTTGG+CGG + chr1_3:50077083-50077102 Msa0123170:intron 35.0%
!! AACCCTTTTTGTTTCACACT+AGG + chr1_3:50077139-50077158 Msa0123170:intron 35.0%
!! ACCCTTTTTGTTTCACACTA+GGG + chr1_3:50077140-50077159 Msa0123170:intron 35.0%
ACCCTAGTGTGAAACAAAAA+GGG - chr1_3:50077144-50077163 None:intergenic 35.0%
AACCCTAGTGTGAAACAAAA+AGG - chr1_3:50077145-50077164 None:intergenic 35.0%
! TTGCGGTTTTCTCATAGAAA+AGG + chr1_3:50077215-50077234 Msa0123170:intron 35.0%
GGTAAATGATGTTATCTGAG+TGG + chr1_3:50077266-50077285 Msa0123170:intron 35.0%
!!! ATTAGAAGTGCCATTTTCTC+TGG + chr1_3:50077378-50077397 Msa0123170:intron 35.0%
AATTTGGGTAAACCAACACT+TGG + chr1_3:50077516-50077535 Msa0123170:intron 35.0%
ATTTGGGTAAACCAACACTT+GGG + chr1_3:50077517-50077536 Msa0123170:intron 35.0%
CAAATTAGTACTAGCATGCA+TGG + chr1_3:50077951-50077970 Msa0123170:intron 35.0%
! GTGCTGTTAATGGAAATAGA+TGG + chr1_3:50078024-50078043 Msa0123170:intron 35.0%
CAATTACATACACGACTACT+AGG - chr1_3:50078122-50078141 None:intergenic 35.0%
GAGATTGAACCTCAATTTCA+AGG + chr1_3:50078177-50078196 Msa0123170:intron 35.0%
AACAATAAAAGAGACGCTTG+TGG - chr1_3:50078431-50078450 None:intergenic 35.0%
!! ACATTTAGGCTTTGTTTGGA+GGG + chr1_3:50078574-50078593 Msa0123170:intron 35.0%
! TAGATGGCATTGAGAAAAGA+AGG + chr1_3:50078647-50078666 Msa0123170:intron 35.0%
CATTGAGAAAAGAAGGCTTT+GGG + chr1_3:50078654-50078673 Msa0123170:intron 35.0%
ATTGAGAAAAGAAGGCTTTG+GGG + chr1_3:50078655-50078674 Msa0123170:intron 35.0%
TACAAAATCCTCCTCATTTG+GGG + chr1_3:50078696-50078715 Msa0123170:intron 35.0%
!!! ATTTTTGAGTTCCCCAAATG+AGG - chr1_3:50078710-50078729 None:intergenic 35.0%
!!! TATTGAATGAGGGTTTTGGA+GGG + chr1_3:50078732-50078751 Msa0123170:intron 35.0%
CACTATTACTATCGTCTCTA+AGG - chr1_3:50078954-50078973 None:intergenic 35.0%
!! CACATATTCTAGGACCAAAA+TGG + chr1_3:50078977-50078996 Msa0123170:intron 35.0%
!! ATATTCTAGGACCAAAATGG+TGG + chr1_3:50078980-50078999 Msa0123170:intron 35.0%
! AAAAGGGTAAACCACCATTT+TGG - chr1_3:50078994-50079013 None:intergenic 35.0%
TGGTGATAAAAGAGGATAAC+TGG + chr1_3:50079061-50079080 Msa0123170:intron 35.0%
!! GTTGATAGTTTGCTACCATA+GGG + chr1_3:50079384-50079403 Msa0123170:intron 35.0%
AGGACGAAAAAAGTAAAGGA+AGG - chr1_3:50079434-50079453 None:intergenic 35.0%
TCCTTACACGATTATCTTTG+TGG + chr1_3:50079450-50079469 Msa0123170:intron 35.0%
ACCACAAAGATAATCGTGTA+AGG - chr1_3:50079454-50079473 None:intergenic 35.0%
GTATATTCATGCACTTCTCT+AGG + chr1_3:50079562-50079581 Msa0123170:CDS 35.0%
CATTCTCATGTCAAAATTGG+AGG + chr1_3:50079598-50079617 Msa0123170:CDS 35.0%
AGGACTAAAGTATGGTTCAA+CGG + chr1_3:50079618-50079637 Msa0123170:CDS 35.0%
CCTGAATTATGCGATACTAA+TGG - chr1_3:50079793-50079812 None:intergenic 35.0%
CCATTAGTATCGCATAATTC+AGG + chr1_3:50079790-50079809 Msa0123170:CDS 35.0%
GCATAATTCAGGAAAATTCC+AGG + chr1_3:50079801-50079820 Msa0123170:CDS 35.0%
! TTTCTTCAATAGGTTGAGGA+GGG - chr1_3:50079974-50079993 None:intergenic 35.0%
AGTGTTTCTTCAATAGGTTG+AGG - chr1_3:50079978-50079997 None:intergenic 35.0%
! CAACAGAGTGTTTCTTCAAT+AGG - chr1_3:50079984-50080003 None:intergenic 35.0%
! ATTGGTTACTTTCTTGCAAC+TGG - chr1_3:50080059-50080078 None:intergenic 35.0%
TCAATGTCAGACACAAGTTT+AGG - chr1_3:50080324-50080343 None:intergenic 35.0%
ATCATCAGAAAATTCAGGGA+AGG - chr1_3:50080370-50080389 None:intergenic 35.0%
AACCTATAATAATGAGGGTG+TGG + chr1_3:50080410-50080429 Msa0123170:CDS 35.0%
ATCCACACCCTCATTATTAT+AGG - chr1_3:50080415-50080434 None:intergenic 35.0%
CACTGAAGATGTCTGAATTA+AGG + chr1_3:50080469-50080488 Msa0123170:CDS 35.0%
! GAGAACTGATTCTGAGTAAA+CGG + chr1_3:50080564-50080583 Msa0123170:exon 35.0%
!! GCGACATTGTTTTGTTGTGT+TGG - chr1_3:50076959-50076978 None:intergenic 40.0%
GATATACTAACCGACGTTGT+TGG - chr1_3:50077003-50077022 None:intergenic 40.0%
ACCTACTTAAAAACCGCCAA+GGG - chr1_3:50077099-50077118 None:intergenic 40.0%
!!! AGTGCCATTTTCTCTGGTTT+AGG + chr1_3:50077384-50077403 Msa0123170:intron 40.0%
! GACCTCTGATTTTATCGGAA+CGG - chr1_3:50077584-50077603 None:intergenic 40.0%
ACTATACTATAGGGACAACC+AGG - chr1_3:50078379-50078398 None:intergenic 40.0%
!! CAGGACATTTAGGCTTTGTT+TGG + chr1_3:50078570-50078589 Msa0123170:intron 40.0%
!! GACATTTAGGCTTTGTTTGG+AGG + chr1_3:50078573-50078592 Msa0123170:intron 40.0%
AGGGGTTTGGAAAAAAAGGA+AGG + chr1_3:50078609-50078628 Msa0123170:intron 40.0%
GCATTGAGAAAAGAAGGCTT+TGG + chr1_3:50078653-50078672 Msa0123170:intron 40.0%
! TTGAGAAAAGAAGGCTTTGG+GGG + chr1_3:50078656-50078675 Msa0123170:intron 40.0%
!! GTATTGAATGAGGGTTTTGG+AGG + chr1_3:50078731-50078750 Msa0123170:intron 40.0%
! TAAGGGTTTGTTTGGGAGTT+TGG - chr1_3:50078936-50078955 None:intergenic 40.0%
! TCGTCTCTAAGGGTTTGTTT+GGG - chr1_3:50078943-50078962 None:intergenic 40.0%
! ATCGTCTCTAAGGGTTTGTT+TGG - chr1_3:50078944-50078963 None:intergenic 40.0%
GTAGCAAACTATCAACCTCT+AGG - chr1_3:50079380-50079399 None:intergenic 40.0%
!! GGTTGATAGTTTGCTACCAT+AGG + chr1_3:50079383-50079402 Msa0123170:intron 40.0%
ATACAAAACATGGTGCCCTA+TGG - chr1_3:50079402-50079421 None:intergenic 40.0%
! CATCTTTTGCATGTGAAGCA+AGG + chr1_3:50079644-50079663 Msa0123170:CDS 40.0%
TCAAGGCAAAACAATAGGCA+TGG + chr1_3:50079682-50079701 Msa0123170:CDS 40.0%
CAAGGCAAAACAATAGGCAT+GGG + chr1_3:50079683-50079702 Msa0123170:CDS 40.0%
GCAGAAATAGGAACGATGAT+GGG + chr1_3:50079716-50079735 Msa0123170:CDS 40.0%
TCAACAATCTCCTTCTCTCT+GGG - chr1_3:50079844-50079863 None:intergenic 40.0%
TTCAACAATCTCCTTCTCTC+TGG - chr1_3:50079845-50079864 None:intergenic 40.0%
TTTGCTCTTTAACATGCCCT+CGG - chr1_3:50079939-50079958 None:intergenic 40.0%
! GTTTCTTCAATAGGTTGAGG+AGG - chr1_3:50079975-50079994 None:intergenic 40.0%
AAGAAACACTCTGTTGAGCA+AGG + chr1_3:50079988-50080007 Msa0123170:CDS 40.0%
GAGCAAGGAAAGAGAAGTAA+TGG + chr1_3:50080003-50080022 Msa0123170:CDS 40.0%
! AGGAAAGAGAAGTAATGGAG+AGG + chr1_3:50080008-50080027 Msa0123170:CDS 40.0%
AGAAGCCAACATTGCTTCTT+CGG + chr1_3:50080137-50080156 Msa0123170:CDS 40.0%
! TTTCTTTGGAAAACTGACCG+AGG - chr1_3:50080168-50080187 None:intergenic 40.0%
TCAGCCAAGTTATTAGAGAG+AGG - chr1_3:50080219-50080238 None:intergenic 40.0%
! TCAGACACAAGTTTAGGTTC+TGG - chr1_3:50080318-50080337 None:intergenic 40.0%
GCATGTAGTGGTTCAAAATG+AGG + chr1_3:50080437-50080456 Msa0123170:CDS 40.0%
AGGGTTCTCCAAAATGAAGA+AGG + chr1_3:50080518-50080537 Msa0123170:CDS 40.0%
GGGTTCTCCAAAATGAAGAA+GGG + chr1_3:50080519-50080538 Msa0123170:CDS 40.0%
! GAGATCTCCCTTCTTCATTT+TGG - chr1_3:50080529-50080548 None:intergenic 40.0%
AATATTCCGATCCAATCACC+TGG + chr1_3:50080709-50080728 Msa0123170:three_prime_UTR 40.0%
ATATTCCGATCCAATCACCT+GGG + chr1_3:50080710-50080729 Msa0123170:three_prime_UTR 40.0%
!!! ACCCTTGGCGGTTTTTAAGT+AGG + chr1_3:50077095-50077114 Msa0123170:intron 45.0%
CACCTACTTAAAAACCGCCA+AGG - chr1_3:50077100-50077119 None:intergenic 45.0%
GAAAACGCCTCACACATTCA+GGG - chr1_3:50077544-50077563 None:intergenic 45.0%
TGAAAACGCCTCACACATTC+AGG - chr1_3:50077545-50077564 None:intergenic 45.0%
CACTTGGGTCCTTGAAATTG+AGG - chr1_3:50078189-50078208 None:intergenic 45.0%
TTGAGGCTCCTATGATTACG+AGG + chr1_3:50078313-50078332 Msa0123170:intron 45.0%
!! AGGCTTTGTTTGGAGGGTAA+AGG + chr1_3:50078580-50078599 Msa0123170:intron 45.0%
!! GGCTTTGTTTGGAGGGTAAA+GGG + chr1_3:50078581-50078600 Msa0123170:intron 45.0%
GAGGAGGGGTTTGGAAAAAA+AGG + chr1_3:50078605-50078624 Msa0123170:intron 45.0%
! TTTGAGTTCCCCAAATGAGG+AGG - chr1_3:50078707-50078726 None:intergenic 45.0%
GTTTGTTTGGGAGTTTGGAG+GGG - chr1_3:50078931-50078950 None:intergenic 45.0%
! GGTTTGTTTGGGAGTTTGGA+GGG - chr1_3:50078932-50078951 None:intergenic 45.0%
AACTGGTGTGCCCTTTATGA+TGG + chr1_3:50079078-50079097 Msa0123170:intron 45.0%
CTTGGTAAGGTTCCCTCTAA+GGG - chr1_3:50079230-50079249 None:intergenic 45.0%
CATGGGAAACACTTGTCTTC+TGG - chr1_3:50079514-50079533 None:intergenic 45.0%
TTCCAAAACCACGTGAGCAT+GGG - chr1_3:50079531-50079550 None:intergenic 45.0%
! CTTTTGCATGTGAAGCAAGG+AGG + chr1_3:50079647-50079666 Msa0123170:CDS 45.0%
GGAGGAACTCAGATTTCTCA+AGG + chr1_3:50079665-50079684 Msa0123170:CDS 45.0%
AATAGGCATGGGTCATCAAG+AGG + chr1_3:50079694-50079713 Msa0123170:CDS 45.0%
GGTCATCAAGAGGCAGAAAT+AGG + chr1_3:50079704-50079723 Msa0123170:CDS 45.0%
GGCAGAAATAGGAACGATGA+TGG + chr1_3:50079715-50079734 Msa0123170:CDS 45.0%
CAACAATCTCCTTCTCTCTG+GGG - chr1_3:50079843-50079862 None:intergenic 45.0%
! AGAAGTAATGGAGAGGACGA+TGG + chr1_3:50080015-50080034 Msa0123170:CDS 45.0%
CTTGCAACTGGTCAGAGTTA+AGG - chr1_3:50080047-50080066 None:intergenic 45.0%
TTCTGATTCAGGTGCTCCAA+AGG + chr1_3:50080104-50080123 Msa0123170:CDS 45.0%
TCTGATTCAGGTGCTCCAAA+GGG + chr1_3:50080105-50080124 Msa0123170:CDS 45.0%
GTGGAACAGGAGACTTTCTT+TGG - chr1_3:50080182-50080201 None:intergenic 45.0%
CCAAGTTATTAGAGAGAGGC+TGG - chr1_3:50080215-50080234 None:intergenic 45.0%
CCAGCCTCTCTCTAATAACT+TGG + chr1_3:50080212-50080231 Msa0123170:CDS 45.0%
AATGAAGAAGGGAGATCTCG+TGG + chr1_3:50080530-50080549 Msa0123170:CDS 45.0%
TCTGAGTAAACGGTACGAGA+AGG + chr1_3:50080574-50080593 Msa0123170:three_prime_UTR 45.0%
TAATCACCGTGTCTTTGCCT+TGG + chr1_3:50080757-50080776 Msa0123170:three_prime_UTR 45.0%
AAACCACCAAGGCAAAGACA+CGG - chr1_3:50080766-50080785 None:intergenic 45.0%
!!! ATTGTTTTAATATTAAAAAT+TGG + chr1_3:50077771-50077790 Msa0123170:intron 5.0%
!!! TTGTTTTAATATTAAAAATT+GGG + chr1_3:50077772-50077791 Msa0123170:intron 5.0%
!! AAAAAATACTAAATATTTAA+CGG + chr1_3:50077992-50078011 Msa0123170:intron 5.0%
!!! TATTATTTAAAATAAATGAA+TGG - chr1_3:50079035-50079054 None:intergenic 5.0%
!!! TATTTTAAATAATAAATCAA+TGG + chr1_3:50079041-50079060 Msa0123170:intron 5.0%
!!! TAATATATGTTTTTTTTTTA+TGG + chr1_3:50079182-50079201 Msa0123170:intron 5.0%
ACATTCAGGGACCCAAGTGT+TGG - chr1_3:50077531-50077550 None:intergenic 50.0%
! GTTTTCAGCCGTTGTCACCA+GGG + chr1_3:50077558-50077577 Msa0123170:intron 50.0%
! TGATTTTATCGGAACGGCCC+TGG - chr1_3:50077578-50077597 None:intergenic 50.0%
GGCCGTTCCGATAAAATCAG+AGG + chr1_3:50077579-50077598 Msa0123170:intron 50.0%
! AGCTCACTTTGCGCTTGCTA+AGG + chr1_3:50078347-50078366 Msa0123170:intron 50.0%
! GCTCACTTTGCGCTTGCTAA+GGG + chr1_3:50078348-50078367 Msa0123170:intron 50.0%
TGTTTGGAGGGTAAAGGGAG+AGG + chr1_3:50078586-50078605 Msa0123170:intron 50.0%
! GGGTTTGTTTGGGAGTTTGG+AGG - chr1_3:50078933-50078952 None:intergenic 50.0%
GCTTGGTAAGGTTCCCTCTA+AGG - chr1_3:50079231-50079250 None:intergenic 50.0%
TAGAGGGAACCTTACCAAGC+TGG + chr1_3:50079231-50079250 Msa0123170:intron 50.0%
AAGTGTTTCCCATGCTCACG+TGG + chr1_3:50079520-50079539 Msa0123170:CDS 50.0%
! TTCCCATGCTCACGTGGTTT+TGG + chr1_3:50079526-50079545 Msa0123170:CDS 50.0%
CTTCCAAAACCACGTGAGCA+TGG - chr1_3:50079532-50079551 None:intergenic 50.0%
AAGAAAGTTGAAGCACGCCG+AGG + chr1_3:50079919-50079938 Msa0123170:CDS 50.0%
AGAAAGTTGAAGCACGCCGA+GGG + chr1_3:50079920-50079939 Msa0123170:CDS 50.0%
CCAACATTGCTTCTTCGGCT+CGG + chr1_3:50080142-50080161 Msa0123170:CDS 50.0%
AGTCTCCTGTTCCACGTGTT+AGG + chr1_3:50080187-50080206 Msa0123170:CDS 50.0%
TGGTACCTAACACGTGGAAC+AGG - chr1_3:50080195-50080214 None:intergenic 50.0%
CAAAGTCTCGTGGCGTGAAA+GGG + chr1_3:50080499-50080518 Msa0123170:CDS 50.0%
TCGAACCCAGGTGATTGGAT+CGG - chr1_3:50080718-50080737 None:intergenic 50.0%
TACACTCGAACCCAGGTGAT+TGG - chr1_3:50080723-50080742 None:intergenic 50.0%
CTCATCGTCGCCAACAACGT+CGG + chr1_3:50076990-50077009 Msa0123170:CDS 55.0%
CTTGGGTCCCTGAATGTGTG+AGG + chr1_3:50077534-50077553 Msa0123170:intron 55.0%
! CGTTTTCAGCCGTTGTCACC+AGG + chr1_3:50077557-50077576 Msa0123170:intron 55.0%
CTGTCGGGCCTCGTAATCAT+AGG - chr1_3:50078324-50078343 None:intergenic 55.0%
GCAAAGTGAGCTACGCTGTC+GGG - chr1_3:50078339-50078358 None:intergenic 55.0%
CGCAAAGTGAGCTACGCTGT+CGG - chr1_3:50078340-50078359 None:intergenic 55.0%
! ACTTTGCGCTTGCTAAGGGC+CGG + chr1_3:50078352-50078371 Msa0123170:intron 55.0%
ACTATAGGGACAACCAGGCC+CGG - chr1_3:50078374-50078393 None:intergenic 55.0%
TTGGAGGGTAAAGGGAGAGG+AGG + chr1_3:50078589-50078608 Msa0123170:intron 55.0%
TGGAGGGTAAAGGGAGAGGA+GGG + chr1_3:50078590-50078609 Msa0123170:intron 55.0%
GTAAAGGGAGAGGAGGGGTT+TGG + chr1_3:50078596-50078615 Msa0123170:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - chr1_3:50078926-50078945 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr1_3:50078927-50078946 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr1_3:50078928-50078947 None:intergenic 55.0%
TTCAAGCTCGGTTGCGTGAG+AGG + chr1_3:50079878-50079897 Msa0123170:CDS 55.0%
CCGAGCCGAAGAAGCAATGT+TGG - chr1_3:50080145-50080164 None:intergenic 55.0%
AGAGGCTGGTACCTAACACG+TGG - chr1_3:50080201-50080220 None:intergenic 55.0%
GGGTGTGGATGAGCATGTAG+TGG + chr1_3:50080425-50080444 Msa0123170:CDS 55.0%
! AGGGCACTTGCAAAGTCTCG+TGG + chr1_3:50080489-50080508 Msa0123170:CDS 55.0%
GCAAAGTCTCGTGGCGTGAA+AGG + chr1_3:50080498-50080517 Msa0123170:CDS 55.0%
CACCTGGGTTCGAGTGTAGT+TGG + chr1_3:50080725-50080744 Msa0123170:three_prime_UTR 55.0%
GACCAACTACACTCGAACCC+AGG - chr1_3:50080730-50080749 None:intergenic 55.0%
TCACCGTGTCTTTGCCTTGG+TGG + chr1_3:50080760-50080779 Msa0123170:three_prime_UTR 55.0%
! CTTTGCGCTTGCTAAGGGCC+GGG + chr1_3:50078353-50078372 Msa0123170:intron 60.0%
GGAGGGTAAAGGGAGAGGAG+GGG + chr1_3:50078591-50078610 Msa0123170:intron 60.0%
GAGTTTGGAGGGGAGGGGAA+GGG - chr1_3:50078921-50078940 None:intergenic 60.0%
TTCCAGGCCACTTCATCCCC+TGG + chr1_3:50079817-50079836 Msa0123170:CDS 60.0%
!! TCTCCTTCTCTCTGGGGCCA+GGG - chr1_3:50079837-50079856 None:intergenic 60.0%
!! ATCTCCTTCTCTCTGGGGCC+AGG - chr1_3:50079838-50079857 None:intergenic 60.0%
GCTTCTCGAGACTCGCCCTT+TGG - chr1_3:50080123-50080142 None:intergenic 60.0%
!! TTGCTTCTTCGGCTCGGCCT+CGG + chr1_3:50080148-50080167 Msa0123170:CDS 60.0%
CGGAACGGCCCTGGTGACAA+CGG - chr1_3:50077569-50077588 None:intergenic 65.0%
GGGGAAGGGAAGGCTTCGGA+AGG - chr1_3:50078907-50078926 None:intergenic 65.0%
GGGAGGGGAAGGGAAGGCTT+CGG - chr1_3:50078911-50078930 None:intergenic 65.0%
TTGGAGGGGAGGGGAAGGGA+AGG - chr1_3:50078917-50078936 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+AGG - chr1_3:50078922-50078941 None:intergenic 65.0%
! TCTGGGGCCAGGGGATGAAG+TGG - chr1_3:50079827-50079846 None:intergenic 65.0%
ATCCCCTGGCCCCAGAGAGA+AGG + chr1_3:50079831-50079850 Msa0123170:CDS 65.0%
!! CTCCTTCTCTCTGGGGCCAG+GGG - chr1_3:50079836-50079855 None:intergenic 65.0%
GGCCAGGGGATGAAGTGGCC+TGG - chr1_3:50079822-50079841 None:intergenic 70.0%
! CGCTTGCTAAGGGCCGGGCC+TGG + chr1_3:50078358-50078377 Msa0123170:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 50076928 50080836 50076928 ID=Msa0123170;Name=Msa0123170
chr1_3 mRNA 50076928 50080836 50076928 ID=Msa0123170-mRNA-1;Parent=Msa0123170;Name=Msa0123170-mRNA-1;_AED=0.01;_eAED=0.01;_QI=44|1|1|1|1|1|2|264|370
chr1_3 exon 50076928 50077011 50076928 ID=Msa0123170-mRNA-1:exon:15252;Parent=Msa0123170-mRNA-1
chr1_3 exon 50079500 50080836 50079500 ID=Msa0123170-mRNA-1:exon:15253;Parent=Msa0123170-mRNA-1
chr1_3 five_prime_UTR 50076928 50076971 50076928 ID=Msa0123170-mRNA-1:five_prime_utr;Parent=Msa0123170-mRNA-1
chr1_3 CDS 50076972 50077011 50076972 ID=Msa0123170-mRNA-1:cds;Parent=Msa0123170-mRNA-1
chr1_3 CDS 50079500 50080572 50079500 ID=Msa0123170-mRNA-1:cds;Parent=Msa0123170-mRNA-1
chr1_3 three_prime_UTR 50080573 50080836 50080573 ID=Msa0123170-mRNA-1:three_prime_utr;Parent=Msa0123170-mRNA-1
Gene Sequence

>Msa0123170

ATGTCGCAAACTGTTCATCTCATCGTCGCCAACAACGTCGGTTGTGGAATGCCAGAAGACAAGTGTTTCCCATGCTCACGTGGTTTTGGAAGAACAACTGTTGTATATTCATGCACTTCTCTAGGTCGTCGTAGAATTCATTCTCATGTCAAAATTGGAGGACTAAAGTATGGTTCAACGGCTGCATCTTTTGCATGTGAAGCAAGGAGGAACTCAGATTTCTCAAGGCAAAACAATAGGCATGGGTCATCAAGAGGCAGAAATAGGAACGATGATGGGAGAGATATCTTTGAGAATTTTGAAGAAGATATGTTATCTTCAAAAAATGGACCATTAGTATCGCATAATTCAGGAAAATTCCAGGCCACTTCATCCCCTGGCCCCAGAGAGAAGGAGATTGTTGAATTATTTAGGAAAGTTCAAGCTCGGTTGCGTGAGAGGACCACTGTCAAAGAAGAAAAGAAAGTTGAAGCACGCCGAGGGCATGTTAAAGAGCAAAGTGCTGTAGATTCCCTCCTCAACCTATTGAAGAAACACTCTGTTGAGCAAGGAAAGAGAAGTAATGGAGAGGACGATGGAAAAGACCTTAACTCTGACCAGTTGCAAGAAAGTAACCAATATAATGGAAGGCAAAACTCTAAATTTTCTGATTCAGGTGCTCCAAAGGGCGAGTCTCGAGAAGCCAACATTGCTTCTTCGGCTCGGCCTCGGTCAGTTTTCCAAAGAAAGTCTCCTGTTCCACGTGTTAGGTACCAGCCTCTCTCTAATAACTTGGCTGATACTAATGCAGTACCAATAGATACTGAAGATAATGAGAACATTCAGGATCAATTAGATTCGAAACTTGACGACGAGCCAGAACCTAAACTTGTGTCTGACATTGATCTTGATACAAAGGATGAGACGTCCTTCCCTGAATTTTCTGATGATGATTCTCATGACTCCGAACAAACCTATAATAATGAGGGTGTGGATGAGCATGTAGTGGTTCAAAATGAGGATTTGAATGCACTGAAGATGTCTGAATTAAGGGCACTTGCAAAGTCTCGTGGCGTGAAAGGGTTCTCCAAAATGAAGAAGGGAGATCTCGTGGAGCTACTAACTGAGAACTGA

Protein sequence

>Msa0123170

MSQTVHLIVANNVGCGMPEDKCFPCSRGFGRTTVVYSCTSLGRRRIHSHVKIGGLKYGSTAASFACEARRNSDFSRQNNRHGSSRGRNRNDDGRDIFENFEEDMLSSKNGPLVSHNSGKFQATSSPGPREKEIVELFRKVQARLRERTTVKEEKKVEARRGHVKEQSAVDSLLNLLKKHSVEQGKRSNGEDDGKDLNSDQLQESNQYNGRQNSKFSDSGAPKGESREANIASSARPRSVFQRKSPVPRVRYQPLSNNLADTNAVPIDTEDNENIQDQLDSKLDDEPEPKLVSDIDLDTKDETSFPEFSDDDSHDSEQTYNNEGVDEHVVVQNEDLNALKMSELRALAKSRGVKGFSKMKKGDLVELLTEN*