Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0588870 | RXI03783.1 | 60.290 | 345 | 87 | 5 | 35 | 334 | 34 | 373 | 1.95e-139 | 410 |
| Msa0588870 | RXI03783.1 | 62.048 | 166 | 48 | 3 | 27 | 180 | 209 | 371 | 6.49e-60 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0588870 | sp|Q9C523|DIR19_ARATH | 67.105 | 152 | 50 | 0 | 183 | 334 | 34 | 185 | 1.30e-71 | 223 |
| Msa0588870 | sp|Q9C523|DIR19_ARATH | 56.284 | 183 | 60 | 3 | 12 | 180 | 7 | 183 | 2.07e-63 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0588870 | A0A4Y1RKA8 | 63.758 | 298 | 85 | 4 | 49 | 334 | 94 | 380 | 7.40e-130 | 385 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0588870 | 0.805931 | 1.051571e-49 | -8.615850e-47 |
| Msa0003930 | Msa0588870 | 0.816450 | 5.495672e-52 | -8.615850e-47 |
| Msa0010890 | Msa0588870 | 0.825434 | 4.698610e-54 | -8.615850e-47 |
| Msa0057890 | Msa0588870 | 0.846143 | 2.613256e-59 | -8.615850e-47 |
| Msa0100090 | Msa0588870 | 0.809270 | 2.055608e-50 | -8.615850e-47 |
| Msa0173990 | Msa0588870 | 0.812172 | 4.845175e-51 | -8.615850e-47 |
| Msa0187830 | Msa0588870 | 0.821241 | 4.484085e-53 | -8.615850e-47 |
| Msa0197660 | Msa0588870 | 0.853187 | 2.820253e-61 | -8.615850e-47 |
| Msa0212310 | Msa0588870 | 0.811322 | 7.420161e-51 | -8.615850e-47 |
| Msa0365780 | Msa0588870 | 0.807374 | 5.214849e-50 | -8.615850e-47 |
| Msa0367870 | Msa0588870 | 0.800953 | 1.131760e-48 | -8.615850e-47 |
| Msa0395770 | Msa0588870 | -0.803326 | 3.676964e-49 | -8.615850e-47 |
| Msa0428080 | Msa0588870 | 0.823156 | 1.611738e-53 | -8.615850e-47 |
| Msa0435690 | Msa0588870 | 0.810200 | 1.297245e-50 | -8.615850e-47 |
| Msa0445280 | Msa0588870 | 0.825951 | 3.543110e-54 | -8.615850e-47 |
| Msa0239800 | Msa0588870 | 0.847381 | 1.198988e-59 | -8.615850e-47 |
| Msa0267370 | Msa0588870 | 0.801868 | 7.347855e-49 | -8.615850e-47 |
| Msa0277820 | Msa0588870 | 0.818395 | 2.004978e-52 | -8.615850e-47 |
| Msa0317510 | Msa0588870 | 0.850357 | 1.789225e-60 | -8.615850e-47 |
| Msa0321080 | Msa0588870 | 0.809125 | 2.208513e-50 | -8.615850e-47 |
| Msa0340450 | Msa0588870 | 0.818513 | 1.884575e-52 | -8.615850e-47 |
| Msa0526070 | Msa0588870 | -0.829129 | 6.116591e-55 | -8.615850e-47 |
| Msa0529890 | Msa0588870 | 0.808525 | 2.966922e-50 | -8.615850e-47 |
| Msa0541040 | Msa0588870 | 0.804202 | 2.419589e-49 | -8.615850e-47 |
| Msa0588870 | Msa0620620 | 0.807006 | 6.239001e-50 | -8.615850e-47 |
| Msa0588870 | Msa0622170 | -0.826998 | 1.993697e-54 | -8.615850e-47 |
| Msa0588870 | Msa0625190 | 0.865574 | 5.348638e-65 | -8.615850e-47 |
| Msa0588870 | Msa0625720 | 0.805950 | 1.042006e-49 | -8.615850e-47 |
| Msa0588870 | Msa0626360 | 0.811652 | 6.288406e-51 | -8.615850e-47 |
| Msa0588870 | Msa0629080 | 0.819999 | 8.645386e-53 | -8.615850e-47 |
| Msa0588870 | Msa0661650 | 0.821347 | 4.236958e-53 | -8.615850e-47 |
| Msa0588870 | Msa0666650 | 0.903726 | 2.573453e-79 | -8.615850e-47 |
| Msa0588870 | Msa0673460 | 0.807935 | 3.962852e-50 | -8.615850e-47 |
| Msa0588870 | Msa0678090 | 0.817399 | 3.364536e-52 | -8.615850e-47 |
| Msa0588870 | Msa0679290 | -0.836123 | 1.125026e-56 | -8.615850e-47 |
| Msa0588870 | Msa0708310 | 0.819724 | 9.995761e-53 | -8.615850e-47 |
| Msa0588870 | Msa0762890 | 0.810099 | 1.364312e-50 | -8.615850e-47 |
| Msa0588870 | Msa0825870 | 0.824760 | 6.778940e-54 | -8.615850e-47 |
| Msa0588870 | Msa0826760 | 0.814100 | 1.829169e-51 | -8.615850e-47 |
| Msa0588870 | Msa0842650 | 0.815418 | 9.340115e-52 | -8.615850e-47 |
| Msa0588870 | Msa0857640 | 0.802972 | 4.352243e-49 | -8.615850e-47 |
| Msa0588870 | Msa0865330 | 0.806837 | 6.775610e-50 | -8.615850e-47 |
| Msa0588870 | Msa0867160 | 0.810066 | 1.386315e-50 | -8.615850e-47 |
| Msa0588870 | Msa0870060 | 0.811353 | 7.303588e-51 | -8.615850e-47 |
| Msa0588870 | Msa0914290 | 0.804039 | 2.615253e-49 | -8.615850e-47 |
| Msa0588870 | Msa0936530 | 0.820661 | 6.096983e-53 | -8.615850e-47 |
| Msa0588870 | Msa0964130 | 0.805714 | 1.168272e-49 | -8.615850e-47 |
| Msa0588870 | Msa1039710 | -0.822741 | 2.014479e-53 | -8.615850e-47 |
| Msa0588870 | Msa1082290 | 0.805959 | 1.037883e-49 | -8.615850e-47 |
| Msa0588870 | Msa1089940 | 0.829604 | 4.689658e-55 | -8.615850e-47 |
| Msa0588870 | Msa1162780 | 0.815199 | 1.044554e-51 | -8.615850e-47 |
| Msa0588870 | Msa1186950 | -0.806354 | 8.568176e-50 | -8.615850e-47 |
| Msa0588870 | Msa1201200 | 0.814848 | 1.249761e-51 | -8.615850e-47 |
| Msa0588870 | Msa1210110 | 0.814537 | 1.464986e-51 | -8.615850e-47 |
| Msa0588870 | Msa1235380 | 0.815884 | 7.353271e-52 | -8.615850e-47 |
| Msa0588870 | Msa1236730 | 0.814075 | 1.852586e-51 | -8.615850e-47 |
| Msa0588870 | Msa1244250 | 0.800049 | 1.729003e-48 | -8.615850e-47 |
| Msa0588870 | Msa1246700 | 0.828264 | 9.900635e-55 | -8.615850e-47 |
| Msa0588870 | Msa1276530 | 0.825486 | 4.565669e-54 | -8.615850e-47 |
| Msa0588870 | Msa1304890 | -0.826155 | 3.167880e-54 | -8.615850e-47 |
| Msa0588870 | Msa1317130 | 0.826248 | 3.009914e-54 | -8.615850e-47 |
| Msa0588870 | Msa1344890 | 0.803782 | 2.958448e-49 | -8.615850e-47 |
| Msa0588870 | Msa1353890 | 0.804729 | 1.877974e-49 | -8.615850e-47 |
| Msa0588870 | Msa1358670 | 0.820757 | 5.795750e-53 | -8.615850e-47 |
| Msa0588870 | Msa1365270 | 0.818955 | 1.495968e-52 | -8.615850e-47 |
| Msa0588870 | Msa1376450 | 0.821819 | 3.297331e-53 | -8.615850e-47 |
| Msa0588870 | Msa1391550 | 0.832505 | 9.096660e-56 | -8.615850e-47 |
| Msa0588870 | Msa1414520 | 0.838814 | 2.299669e-57 | -8.615850e-47 |
| Msa0588870 | Msa1424630 | 0.806001 | 1.016582e-49 | -8.615850e-47 |
| Msa0588870 | Msa1424750 | 0.817859 | 2.649812e-52 | -8.615850e-47 |
| Msa0588870 | Msa1435160 | 0.837399 | 5.318254e-57 | -8.615850e-47 |
| Msa0588870 | Msa1440560 | 0.802754 | 4.827503e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0588870 | MtrunA17_Chr4g0005081 | 87.179 | 195 | 10 | 2 | 1 | 180 | 1 | 195 | 4.84e-112 | 323 |
| Msa0588870 | MtrunA17_Chr4g0005081 | 88.462 | 156 | 18 | 0 | 179 | 334 | 42 | 197 | 7.27e-100 | 292 |
| Msa0588870 | MtrunA17_Chr4g0005071 | 97.436 | 156 | 4 | 0 | 179 | 334 | 41 | 196 | 2.82e-110 | 319 |
| Msa0588870 | MtrunA17_Chr4g0005071 | 81.026 | 195 | 21 | 3 | 1 | 180 | 1 | 194 | 6.80e-99 | 290 |
| Msa0588870 | MtrunA17_Chr7g0259101 | 42.969 | 384 | 156 | 7 | 13 | 334 | 11 | 393 | 9.75e-101 | 302 |
| Msa0588870 | MtrunA17_Chr4g0005031 | 72.619 | 168 | 46 | 0 | 167 | 334 | 54 | 221 | 1.08e-88 | 265 |
| Msa0588870 | MtrunA17_Chr4g0005031 | 69.231 | 182 | 39 | 3 | 16 | 180 | 38 | 219 | 5.11e-86 | 258 |
| Msa0588870 | MtrunA17_Chr4g0005041 | 69.780 | 182 | 36 | 4 | 16 | 180 | 17 | 196 | 9.52e-86 | 256 |
| Msa0588870 | MtrunA17_Chr4g0005041 | 74.684 | 158 | 36 | 2 | 179 | 334 | 43 | 198 | 7.37e-83 | 249 |
| Msa0588870 | MtrunA17_Chr4g0005011 | 62.944 | 197 | 54 | 4 | 1 | 180 | 1 | 195 | 3.27e-76 | 232 |
| Msa0588870 | MtrunA17_Chr4g0005011 | 65.476 | 168 | 56 | 1 | 167 | 334 | 32 | 197 | 1.70e-75 | 230 |
| Msa0588870 | MtrunA17_Chr7g0243501 | 73.684 | 152 | 39 | 1 | 183 | 334 | 42 | 192 | 3.89e-73 | 224 |
| Msa0588870 | MtrunA17_Chr7g0243501 | 62.032 | 187 | 54 | 4 | 10 | 180 | 5 | 190 | 4.03e-66 | 206 |
| Msa0588870 | MtrunA17_Chr4g0005111 | 63.576 | 151 | 54 | 1 | 184 | 334 | 41 | 190 | 4.37e-67 | 209 |
| Msa0588870 | MtrunA17_Chr4g0005111 | 53.005 | 183 | 71 | 3 | 9 | 179 | 8 | 187 | 1.33e-61 | 195 |
| Msa0588870 | MtrunA17_Chr1g0175911 | 63.871 | 155 | 54 | 1 | 180 | 334 | 40 | 192 | 6.06e-65 | 203 |
| Msa0588870 | MtrunA17_Chr1g0175911 | 50.820 | 183 | 76 | 2 | 10 | 180 | 10 | 190 | 1.59e-52 | 171 |
| Msa0588870 | MtrunA17_Chr4g0005131 | 62.987 | 154 | 56 | 1 | 182 | 334 | 38 | 191 | 3.51e-63 | 199 |
| Msa0588870 | MtrunA17_Chr4g0005131 | 54.023 | 174 | 65 | 3 | 19 | 179 | 17 | 188 | 1.45e-55 | 179 |
| Msa0588870 | MtrunA17_Chr7g0259091 | 53.503 | 157 | 71 | 2 | 179 | 334 | 39 | 194 | 3.31e-54 | 176 |
| Msa0588870 | MtrunA17_Chr7g0259091 | 45.355 | 183 | 84 | 4 | 13 | 180 | 11 | 192 | 5.30e-46 | 155 |
| Msa0588870 | MtrunA17_Chr4g0037481 | 52.632 | 152 | 71 | 1 | 184 | 334 | 41 | 192 | 1.57e-53 | 174 |
| Msa0588870 | MtrunA17_Chr4g0037481 | 54.000 | 150 | 56 | 2 | 44 | 180 | 41 | 190 | 3.50e-49 | 163 |
| Msa0588870 | MtrunA17_Chr7g0259121 | 53.205 | 156 | 68 | 2 | 184 | 334 | 38 | 193 | 6.60e-52 | 171 |
| Msa0588870 | MtrunA17_Chr7g0259121 | 46.753 | 154 | 65 | 2 | 44 | 180 | 38 | 191 | 1.56e-42 | 146 |
| Msa0588870 | MtrunA17_Chr7g0259071 | 49.045 | 157 | 78 | 2 | 179 | 334 | 36 | 191 | 1.14e-50 | 167 |
| Msa0588870 | MtrunA17_Chr7g0259071 | 46.711 | 152 | 67 | 3 | 39 | 177 | 36 | 186 | 8.08e-44 | 149 |
| Msa0588870 | MtrunA17_Chr4g0005091 | 54.902 | 153 | 55 | 1 | 182 | 334 | 37 | 175 | 5.65e-50 | 164 |
| Msa0588870 | MtrunA17_Chr4g0005091 | 44.809 | 183 | 73 | 4 | 9 | 179 | 6 | 172 | 7.83e-43 | 146 |
| Msa0588870 | MtrunA17_Chr1g0177051 | 47.682 | 151 | 77 | 2 | 184 | 333 | 36 | 185 | 1.28e-43 | 148 |
| Msa0588870 | MtrunA17_Chr1g0177051 | 47.368 | 152 | 66 | 2 | 44 | 182 | 36 | 186 | 5.89e-41 | 141 |
| Msa0588870 | MtrunA17_Chr3g0085311 | 49.324 | 148 | 73 | 1 | 186 | 333 | 43 | 188 | 8.35e-43 | 146 |
| Msa0588870 | MtrunA17_Chr3g0085311 | 47.917 | 144 | 61 | 2 | 46 | 177 | 43 | 184 | 3.99e-37 | 131 |
| Msa0588870 | MtrunA17_Chr3g0085291 | 47.134 | 157 | 77 | 2 | 179 | 333 | 34 | 186 | 2.32e-42 | 145 |
| Msa0588870 | MtrunA17_Chr3g0085291 | 46.405 | 153 | 64 | 3 | 39 | 177 | 34 | 182 | 2.38e-36 | 129 |
| Msa0588870 | MtrunA17_Chr3g0136641 | 47.468 | 158 | 69 | 2 | 37 | 180 | 29 | 186 | 4.49e-41 | 142 |
| Msa0588870 | MtrunA17_Chr3g0136641 | 46.626 | 163 | 83 | 3 | 174 | 334 | 28 | 188 | 4.89e-41 | 142 |
| Msa0588870 | MtrunA17_Chr3g0136631 | 42.553 | 188 | 88 | 3 | 8 | 180 | 5 | 187 | 2.77e-40 | 140 |
| Msa0588870 | MtrunA17_Chr3g0136631 | 45.283 | 159 | 84 | 2 | 179 | 334 | 31 | 189 | 2.09e-39 | 137 |
| Msa0588870 | MtrunA17_Chr5g0446751 | 44.872 | 156 | 74 | 3 | 187 | 334 | 38 | 189 | 3.32e-40 | 139 |
| Msa0588870 | MtrunA17_Chr5g0446751 | 36.788 | 193 | 87 | 5 | 7 | 177 | 5 | 184 | 1.39e-31 | 117 |
| Msa0588870 | MtrunA17_Chr4g0040551 | 44.966 | 149 | 80 | 1 | 186 | 334 | 39 | 185 | 1.47e-39 | 138 |
| Msa0588870 | MtrunA17_Chr4g0040551 | 44.444 | 144 | 66 | 2 | 46 | 177 | 39 | 180 | 2.60e-34 | 124 |
| Msa0588870 | MtrunA17_Chr3g0090231 | 45.638 | 149 | 79 | 1 | 186 | 334 | 39 | 185 | 3.52e-39 | 137 |
| Msa0588870 | MtrunA17_Chr3g0090231 | 44.444 | 144 | 66 | 2 | 46 | 177 | 39 | 180 | 1.67e-33 | 122 |
| Msa0588870 | MtrunA17_Chr3g0085321 | 44.000 | 150 | 82 | 1 | 184 | 333 | 41 | 188 | 2.09e-37 | 132 |
| Msa0588870 | MtrunA17_Chr3g0085321 | 42.466 | 146 | 70 | 2 | 44 | 177 | 41 | 184 | 1.37e-32 | 119 |
| Msa0588870 | MtrunA17_Chr3g0085301 | 40.642 | 187 | 93 | 3 | 3 | 177 | 9 | 189 | 3.10e-35 | 127 |
| Msa0588870 | MtrunA17_Chr3g0085301 | 45.638 | 149 | 77 | 2 | 186 | 333 | 48 | 193 | 3.45e-35 | 127 |
| Msa0588870 | MtrunA17_Chr4g0005061 | 32.836 | 268 | 129 | 10 | 75 | 334 | 2 | 226 | 6.58e-28 | 108 |
| Msa0588870 | MtrunA17_Chr4g0068381 | 34.932 | 146 | 95 | 0 | 189 | 334 | 35 | 180 | 2.99e-25 | 100 |
| Msa0588870 | MtrunA17_Chr4g0068381 | 34.043 | 141 | 81 | 1 | 49 | 177 | 35 | 175 | 1.98e-21 | 90.1 |
| Msa0588870 | MtrunA17_Chr4g0068391 | 33.333 | 162 | 104 | 1 | 173 | 334 | 23 | 180 | 3.93e-22 | 91.7 |
| Msa0588870 | MtrunA17_Chr4g0068391 | 34.532 | 139 | 79 | 1 | 53 | 179 | 39 | 177 | 6.69e-19 | 83.2 |
| Msa0588870 | MtrunA17_Chr4g0024961 | 30.070 | 143 | 100 | 0 | 187 | 329 | 31 | 173 | 7.15e-17 | 77.4 |
| Msa0588870 | MtrunA17_Chr4g0024961 | 30.345 | 145 | 89 | 1 | 47 | 179 | 31 | 175 | 6.40e-14 | 69.3 |
| Msa0588870 | MtrunA17_Chr4g0024951 | 29.252 | 147 | 104 | 0 | 183 | 329 | 27 | 173 | 3.50e-16 | 75.5 |
| Msa0588870 | MtrunA17_Chr4g0024951 | 30.872 | 149 | 91 | 1 | 43 | 179 | 27 | 175 | 1.23e-14 | 71.2 |
| Msa0588870 | MtrunA17_Chr8g0387701 | 32.353 | 136 | 83 | 3 | 186 | 313 | 34 | 168 | 3.05e-13 | 67.4 |
| Msa0588870 | MtrunA17_Chr8g0387701 | 31.852 | 135 | 73 | 3 | 46 | 161 | 34 | 168 | 8.25e-13 | 66.2 |
| Msa0588870 | MtrunA17_Chr8g0387711 | 34.266 | 143 | 72 | 6 | 193 | 322 | 37 | 170 | 1.39e-11 | 62.8 |
| Msa0588870 | MtrunA17_Chr8g0387711 | 32.283 | 127 | 67 | 3 | 54 | 161 | 38 | 164 | 3.23e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0588870 | AT1G58170.1 | 67.105 | 152 | 50 | 0 | 183 | 334 | 34 | 185 | 1.32e-72 | 223 |
| Msa0588870 | AT1G58170.1 | 56.284 | 183 | 60 | 3 | 12 | 180 | 7 | 183 | 2.10e-64 | 202 |
| Msa0588870 | AT1G55210.1 | 66.026 | 156 | 50 | 1 | 179 | 334 | 35 | 187 | 4.22e-71 | 219 |
| Msa0588870 | AT1G55210.1 | 52.973 | 185 | 71 | 3 | 9 | 180 | 4 | 185 | 9.85e-62 | 195 |
| Msa0588870 | AT1G55210.2 | 66.026 | 156 | 50 | 1 | 179 | 334 | 35 | 187 | 4.22e-71 | 219 |
| Msa0588870 | AT1G55210.2 | 52.973 | 185 | 71 | 3 | 9 | 180 | 4 | 185 | 9.85e-62 | 195 |
| Msa0588870 | AT5G49040.1 | 61.290 | 155 | 60 | 0 | 180 | 334 | 37 | 191 | 3.15e-67 | 209 |
| Msa0588870 | AT5G49040.1 | 51.075 | 186 | 79 | 1 | 7 | 180 | 4 | 189 | 6.60e-59 | 188 |
| Msa0588870 | AT3G13650.1 | 60.265 | 151 | 57 | 1 | 184 | 334 | 39 | 186 | 3.30e-62 | 196 |
| Msa0588870 | AT3G13650.1 | 48.108 | 185 | 79 | 4 | 9 | 180 | 4 | 184 | 2.91e-53 | 174 |
| Msa0588870 | AT5G49030.3 | 61.429 | 140 | 54 | 0 | 180 | 319 | 37 | 176 | 5.57e-52 | 185 |
| Msa0588870 | AT5G49030.3 | 50.575 | 174 | 74 | 1 | 7 | 168 | 4 | 177 | 9.67e-47 | 170 |
| Msa0588870 | AT3G13662.1 | 58.451 | 142 | 56 | 1 | 180 | 321 | 34 | 172 | 7.57e-52 | 169 |
| Msa0588870 | AT3G13662.1 | 46.286 | 175 | 76 | 3 | 7 | 169 | 4 | 172 | 1.79e-41 | 142 |
| Msa0588870 | AT1G65870.1 | 51.656 | 151 | 73 | 0 | 183 | 333 | 39 | 189 | 2.76e-51 | 169 |
| Msa0588870 | AT1G65870.1 | 48.993 | 149 | 64 | 1 | 43 | 179 | 39 | 187 | 4.02e-45 | 152 |
| Msa0588870 | AT2G21100.1 | 50.336 | 149 | 74 | 0 | 185 | 333 | 39 | 187 | 8.75e-51 | 167 |
| Msa0588870 | AT2G21100.1 | 48.649 | 148 | 64 | 1 | 45 | 180 | 39 | 186 | 2.41e-44 | 150 |
| Msa0588870 | AT2G21100.2 | 50.336 | 149 | 74 | 0 | 185 | 333 | 39 | 187 | 8.75e-51 | 167 |
| Msa0588870 | AT2G21100.2 | 48.649 | 148 | 64 | 1 | 45 | 180 | 39 | 186 | 2.41e-44 | 150 |
| Msa0588870 | AT3G13660.1 | 64.407 | 118 | 42 | 0 | 217 | 334 | 8 | 125 | 9.69e-49 | 160 |
| Msa0588870 | AT3G13660.1 | 55.172 | 116 | 40 | 1 | 77 | 180 | 8 | 123 | 2.16e-37 | 130 |
| Msa0588870 | AT5G42500.1 | 45.238 | 168 | 82 | 2 | 166 | 333 | 28 | 185 | 1.10e-45 | 154 |
| Msa0588870 | AT5G42500.1 | 46.309 | 149 | 64 | 3 | 44 | 179 | 38 | 183 | 1.59e-38 | 135 |
| Msa0588870 | AT1G22900.1 | 49.007 | 151 | 75 | 1 | 183 | 333 | 45 | 193 | 2.65e-45 | 153 |
| Msa0588870 | AT1G22900.1 | 46.309 | 149 | 66 | 2 | 43 | 179 | 45 | 191 | 2.39e-38 | 135 |
| Msa0588870 | AT5G42510.1 | 47.333 | 150 | 77 | 1 | 184 | 333 | 35 | 182 | 2.47e-44 | 150 |
| Msa0588870 | AT5G42510.1 | 45.638 | 149 | 65 | 3 | 44 | 179 | 35 | 180 | 4.79e-38 | 134 |
| Msa0588870 | AT3G58090.1 | 51.818 | 110 | 53 | 0 | 224 | 333 | 162 | 271 | 1.36e-35 | 130 |
| Msa0588870 | AT3G58090.1 | 47.222 | 108 | 45 | 1 | 84 | 179 | 162 | 269 | 3.02e-27 | 108 |
| Msa0588870 | AT4G38700.1 | 41.667 | 156 | 85 | 3 | 185 | 334 | 35 | 190 | 6.80e-34 | 123 |
| Msa0588870 | AT4G38700.1 | 38.298 | 188 | 90 | 5 | 7 | 176 | 5 | 184 | 7.31e-32 | 118 |
| Msa0588870 | AT2G21110.1 | 37.419 | 155 | 93 | 1 | 184 | 334 | 32 | 186 | 1.06e-32 | 120 |
| Msa0588870 | AT2G21110.1 | 37.500 | 152 | 79 | 2 | 44 | 179 | 32 | 183 | 9.03e-29 | 110 |
| Msa0588870 | AT4G23690.1 | 35.115 | 131 | 68 | 3 | 42 | 157 | 34 | 162 | 7.45e-14 | 69.7 |
| Msa0588870 | AT4G11210.1 | 30.263 | 152 | 97 | 4 | 172 | 317 | 18 | 166 | 8.94e-12 | 63.5 |
| Msa0588870 | AT4G11210.1 | 32.639 | 144 | 78 | 4 | 37 | 165 | 27 | 166 | 1.10e-11 | 63.2 |
Find 69 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCGGGTCCTAAAGTTAA+AGG | 0.186513 | 4_2:+11341084 | None:intergenic |
| AGTTCTGGTCCTAAAGTTAA+AGG | 0.191161 | 4_2:+11346211 | None:intergenic |
| CATTGGATTGATTACAAAAC+TGG | 0.220000 | 4_2:-11345962 | Msa0588870:CDS |
| ATTGACAACCCTTTAACTTT+AGG | 0.265955 | 4_2:-11341093 | Msa0588870:CDS |
| ATTGACAACCCTTTAACTTT+AGG | 0.265955 | 4_2:-11346220 | Msa0588870:CDS |
| TTCATTGAAGGAAAGTATAA+TGG | 0.275934 | 4_2:-11340973 | Msa0588870:CDS |
| TTCATTGAAGGAAAGTATAA+TGG | 0.275934 | 4_2:-11346100 | Msa0588870:intron |
| TCTGCTTCACAAGAAGAAAT+AGG | 0.302577 | 4_2:-11346148 | Msa0588870:intron |
| CATCTCCCTAACCTTATTAA+TGG | 0.302823 | 4_2:+11346045 | None:intergenic |
| TCTGCTTCACAGGAAGAAAT+AGG | 0.312713 | 4_2:-11341021 | Msa0588870:CDS |
| TAAGTCATTTCAAATTATAT+TGG | 0.313865 | 4_2:-11341212 | Msa0588870:CDS |
| GTAAACTCAACCACTGCTTT+TGG | 0.339769 | 4_2:-11346256 | Msa0588870:CDS |
| AACAAGTTTAGAACTCAATT+CGG | 0.349877 | 4_2:+11341068 | None:intergenic |
| TAAGTCATTTCAGATTCTAT+TGG | 0.351815 | 4_2:-11346339 | Msa0588870:CDS |
| GGGAGTACTATTACTATCTT+GGG | 0.365410 | 4_2:-11340952 | Msa0588870:CDS |
| TGGGAGTACTATTACTATCT+TGG | 0.368563 | 4_2:-11340953 | Msa0588870:CDS |
| GAGGAATCATGCTCGTAATA+AGG | 0.371557 | 4_2:-11340929 | Msa0588870:CDS |
| GAGGAATCCTGCCATTAATA+AGG | 0.372389 | 4_2:-11346056 | Msa0588870:CDS |
| ATGCCTGTTGTTGGTGGTAG+TGG | 0.375988 | 4_2:-11340898 | Msa0588870:CDS |
| ATGCCTGTTGTTGGTGGTAG+TGG | 0.375988 | 4_2:-11346025 | Msa0588870:CDS |
| GAACTGAGTTCTAAACTTGT+TGG | 0.385159 | 4_2:-11346193 | Msa0588870:CDS |
| CCAATAGATCGCAAGTTGTT+AGG | 0.388446 | 4_2:-11341255 | Msa0588870:intron |
| CCAATAGATCGCAAGTTGTT+AGG | 0.388446 | 4_2:-11346382 | Msa0588870:intron |
| GGGAGTACTCTTACTATTGT+AGG | 0.399599 | 4_2:-11346079 | Msa0588870:CDS |
| CATTGGATTGATGCCAAAGC+TGG | 0.410820 | 4_2:-11340835 | Msa0588870:CDS |
| GTTCTGGTCCTAAAGTTAAA+GGG | 0.426776 | 4_2:+11346212 | None:intergenic |
| ACAAGTTTAGAACTCAGTTC+TGG | 0.427865 | 4_2:+11346196 | None:intergenic |
| TATTGGCATGACATAGTTAG+TGG | 0.428044 | 4_2:-11341195 | Msa0588870:CDS |
| GGAACAATTGCAACCGAAGT+TGG | 0.428664 | 4_2:+11341165 | None:intergenic |
| GGAACAATTGCAACCGAAGT+TGG | 0.428664 | 4_2:+11346292 | None:intergenic |
| AGAACAAAGTGAGGAAATGA+TGG | 0.433707 | 4_2:+11346482 | None:intergenic |
| TCATTGAAGGAAAGTATAAT+GGG | 0.435892 | 4_2:-11340972 | Msa0588870:CDS |
| TCATTGAAGGAAAGTATAAT+GGG | 0.435892 | 4_2:-11346099 | Msa0588870:intron |
| ATTCGGGTCCTAAAGTTAAA+GGG | 0.441542 | 4_2:+11341085 | None:intergenic |
| ATCATGCTCGTAATAAGGTT+AGG | 0.442060 | 4_2:-11340924 | Msa0588870:CDS |
| AACACAAGCATCCCCAGCTT+TGG | 0.447090 | 4_2:+11340822 | None:intergenic |
| ATGCTCAAGCTAATACTCAT+TGG | 0.456460 | 4_2:-11345979 | Msa0588870:CDS |
| ATGCTCAAGCTAGTACTCAT+TGG | 0.460522 | 4_2:-11340852 | Msa0588870:CDS |
| GAATTGAGTTCTAAACTTGT+TGG | 0.460969 | 4_2:-11341066 | Msa0588870:CDS |
| TCCCTAACCTTATTAATGGC+AGG | 0.465870 | 4_2:+11346049 | None:intergenic |
| AAACTTGTTGGAAGAGCTCA+AGG | 0.474626 | 4_2:-11346181 | Msa0588870:CDS |
| AAACTTGTTGGTAGAGCTCA+AGG | 0.477359 | 4_2:-11341054 | Msa0588870:CDS |
| ACAAGTTTAGAACTCAATTC+GGG | 0.477778 | 4_2:+11341069 | None:intergenic |
| ATCCTGCCATTAATAAGGTT+AGG | 0.495140 | 4_2:-11346051 | Msa0588870:CDS |
| TCCTGCCATTAATAAGGTTA+GGG | 0.498540 | 4_2:-11346050 | Msa0588870:CDS |
| GTTAGGGAGATGCCTGTTGT+TGG | 0.505285 | 4_2:-11340907 | Msa0588870:CDS |
| GTTAGGGAGATGCCTGTTGT+TGG | 0.505285 | 4_2:-11346034 | Msa0588870:CDS |
| TCATGCTCGTAATAAGGTTA+GGG | 0.511498 | 4_2:-11340923 | Msa0588870:CDS |
| AGTCCACTACCACCAACAAC+AGG | 0.512977 | 4_2:+11340895 | None:intergenic |
| AGTCCACTACCACCAACAAC+AGG | 0.512977 | 4_2:+11346022 | None:intergenic |
| ATTGGATTGATGCCAAAGCT+GGG | 0.519261 | 4_2:-11340834 | Msa0588870:CDS |
| AGGGAGATGCCTGTTGTTGG+TGG | 0.521357 | 4_2:-11340904 | Msa0588870:CDS |
| AGGGAGATGCCTGTTGTTGG+TGG | 0.521357 | 4_2:-11346031 | Msa0588870:CDS |
| GGAGTACTCTTACTATTGTA+GGG | 0.530187 | 4_2:-11346078 | Msa0588870:CDS |
| GAAGGAAGAAGAACAAAGTG+AGG | 0.531404 | 4_2:+11346473 | None:intergenic |
| TATTGGCATGACATCTTGAG+TGG | 0.547551 | 4_2:-11346322 | Msa0588870:CDS |
| GAACAAAGTGAGGAAATGAT+GGG | 0.574629 | 4_2:+11346483 | None:intergenic |
| ATTGGATTGATTACAAAACT+GGG | 0.578974 | 4_2:-11345961 | Msa0588870:CDS |
| GTTGTTAGGCCTAAACAAGA+AGG | 0.591926 | 4_2:-11341241 | Msa0588870:CDS |
| GTTGTTAGGCCTAAACAAGA+AGG | 0.591926 | 4_2:-11346368 | Msa0588870:CDS |
| GTGTGTTGCAAGATATGAGA+AGG | 0.624292 | 4_2:+11346455 | None:intergenic |
| AAAGTGAGGAAATGATGGGA+AGG | 0.639739 | 4_2:+11346487 | None:intergenic |
| GTTGACTAAACCAAAAGCAG+TGG | 0.670239 | 4_2:+11346246 | None:intergenic |
| GTACTATTACTATCTTGGGG+AGG | 0.673978 | 4_2:-11340948 | Msa0588870:CDS |
| TTGGATTGATTACAAAACTG+GGG | 0.674847 | 4_2:-11345960 | Msa0588870:CDS |
| GTACTCTTACTATTGTAGGG+AGG | 0.687219 | 4_2:-11346075 | Msa0588870:CDS |
| AACTTGTTGGAAGAGCTCAA+GGG | 0.691566 | 4_2:-11346180 | Msa0588870:CDS |
| GGAGTACTATTACTATCTTG+GGG | 0.700411 | 4_2:-11340951 | Msa0588870:CDS |
| TTGGATTGATGCCAAAGCTG+GGG | 0.710618 | 4_2:-11340833 | Msa0588870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr4_2:11345028-11345047 | Msa0588870:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr4_2:11345029-11345048 | Msa0588870:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr4_2:11345028-11345047 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr4_2:11345029-11345048 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAA+TGG | - | chr4_2:11345576-11345595 | Msa0588870:intron | 0.0% |
| !! | ATTTAAAGAGATATTATTTA+AGG | - | chr4_2:11341631-11341650 | Msa0588870:intron | 10.0% |
| !!! | GGTTAATTTTTTTTTTTTAA+AGG | + | chr4_2:11342112-11342131 | None:intergenic | 10.0% |
| !! | CAATATAGAAATATTATATT+AGG | - | chr4_2:11342194-11342213 | Msa0588870:intron | 10.0% |
| !!! | AAAAAATCTATTTTTAACAT+TGG | - | chr4_2:11342276-11342295 | Msa0588870:intron | 10.0% |
| !! | TAAAAAAATATAATCAAAGT+TGG | - | chr4_2:11343931-11343950 | Msa0588870:intron | 10.0% |
| !!! | TTTCTAATTCAATTTTTTTT+TGG | + | chr4_2:11345732-11345751 | None:intergenic | 10.0% |
| !! | ATAGAAAAAATATGTAACTA+GGG | - | chr4_2:11341676-11341695 | Msa0588870:intron | 15.0% |
| !!! | TATGTTTTTTTTCATTGTTA+TGG | - | chr4_2:11342072-11342091 | Msa0588870:intron | 15.0% |
| !!! | CCTTTTTATAATAATTACAT+CGG | + | chr4_2:11342133-11342152 | None:intergenic | 15.0% |
| !!! | TACTAACAATATCTAAAATT+GGG | + | chr4_2:11343431-11343450 | None:intergenic | 15.0% |
| !!! | ATACTAACAATATCTAAAAT+TGG | + | chr4_2:11343432-11343451 | None:intergenic | 15.0% |
| !! | GAATTTACACTAATTTAAAA+AGG | - | chr4_2:11344109-11344128 | Msa0588870:intron | 15.0% |
| !!! | ATTTTATCATCTAAAAAAGT+CGG | + | chr4_2:11345648-11345667 | None:intergenic | 15.0% |
| !! | AATATATCTAATTCAAAAAC+AGG | + | chr4_2:11345687-11345706 | None:intergenic | 15.0% |
| !! | TAAGTCATTTCAAATTATAT+TGG | - | chr4_2:11346070-11346089 | Msa0588870:CDS | 15.0% |
| !!! | TCGAACAACAATTTTTTTAA+TGG | + | chr4_2:11341412-11341431 | None:intergenic | 20.0% |
| !! | GCTAAATAATTCATTCAAAT+TGG | + | chr4_2:11341537-11341556 | None:intergenic | 20.0% |
| !!! | AAACTTAACTTTTTTTGAAG+AGG | + | chr4_2:11341559-11341578 | None:intergenic | 20.0% |
| !! | CATAGAAAAAATATGTAACT+AGG | - | chr4_2:11341675-11341694 | Msa0588870:intron | 20.0% |
| !! | TGCAAACAAAACAAAAATTA+GGG | + | chr4_2:11341715-11341734 | None:intergenic | 20.0% |
| !! | TTGCAAACAAAACAAAAATT+AGG | + | chr4_2:11341716-11341735 | None:intergenic | 20.0% |
| !! | CAATGAAAAAAAACATACAT+AGG | + | chr4_2:11342069-11342088 | None:intergenic | 20.0% |
| !! | CCGATGTAATTATTATAAAA+AGG | - | chr4_2:11342130-11342149 | Msa0588870:intron | 20.0% |
| !!! | GATTTTCTTATGTAATGTTT+TGG | + | chr4_2:11342175-11342194 | None:intergenic | 20.0% |
| !!! | TCTTTCTATTTTTTAAGCAA+TGG | + | chr4_2:11342363-11342382 | None:intergenic | 20.0% |
| !!! | ATTACACTTTTTTAGGAAAT+GGG | + | chr4_2:11342694-11342713 | None:intergenic | 20.0% |
| !!! | AATTACACTTTTTTAGGAAA+TGG | + | chr4_2:11342695-11342714 | None:intergenic | 20.0% |
| !!! | TTCCTAAAAAAGTGTAATTT+TGG | - | chr4_2:11342696-11342715 | Msa0588870:intron | 20.0% |
| !!! | AATTTTGGAGATCTATAAAA+TGG | - | chr4_2:11342711-11342730 | Msa0588870:intron | 20.0% |
| !!! | ATTTTGGAGATCTATAAAAT+GGG | - | chr4_2:11342712-11342731 | Msa0588870:intron | 20.0% |
| !!! | ACTAACAATATCTAAAATTG+GGG | + | chr4_2:11343430-11343449 | None:intergenic | 20.0% |
| !!! | TTTTGCAAATAGATGATTAT+AGG | + | chr4_2:11343880-11343899 | None:intergenic | 20.0% |
| !! | CAATAAAAATGAGAAAAACA+AGG | + | chr4_2:11344180-11344199 | None:intergenic | 20.0% |
| !!! | CTTGTTTTTCTCATTTTTAT+TGG | - | chr4_2:11344178-11344197 | Msa0588870:intron | 20.0% |
| !!! | TTTTTATTGGTCAAAAACAA+TGG | - | chr4_2:11344191-11344210 | Msa0588870:intron | 20.0% |
| !! | AGAGAAGTTAACATAAAAAA+TGG | - | chr4_2:11344320-11344339 | Msa0588870:intron | 20.0% |
| !! | CTCTACAAATCTAAATTTAT+TGG | + | chr4_2:11344471-11344490 | None:intergenic | 20.0% |
| !!! | TTTTATCAAGCAACATATTA+AGG | + | chr4_2:11345492-11345511 | None:intergenic | 20.0% |
| ! | TAAGTCATTTCAGATTCTAT+TGG | - | chr4_2:11340943-11340962 | Msa0588870:CDS | 25.0% |
| !! | ATGAATTTTGCTTTCATTGA+AGG | - | chr4_2:11341170-11341189 | Msa0588870:CDS | 25.0% |
| !! | TTCATTGAAGGAAAGTATAA+TGG | - | chr4_2:11341182-11341201 | Msa0588870:CDS | 25.0% |
| !! | TCATTGAAGGAAAGTATAAT+GGG | - | chr4_2:11341183-11341202 | Msa0588870:CDS | 25.0% |
| ! | ATTGGATTGATTACAAAACT+GGG | - | chr4_2:11341321-11341340 | Msa0588870:intron | 25.0% |
| ! | ACAATCAATAGTGAAAAACA+TGG | + | chr4_2:11341370-11341389 | None:intergenic | 25.0% |
| ! | TTGCAAACGTGATATATTAT+CGG | - | chr4_2:11341730-11341749 | Msa0588870:intron | 25.0% |
| ! | GAAAAAAAACATACATAGGA+AGG | + | chr4_2:11342065-11342084 | None:intergenic | 25.0% |
| !!! | TTTTTTGAAGGATTGTTGTT+TGG | + | chr4_2:11342402-11342421 | None:intergenic | 25.0% |
| !!! | ATAGGCTCTTTTTTTTTTGA+AGG | + | chr4_2:11342414-11342433 | None:intergenic | 25.0% |
| ! | TCGTAGACATATATAGATAT+AGG | + | chr4_2:11342432-11342451 | None:intergenic | 25.0% |
| ! | CTACGATATTTAATGATACA+TGG | - | chr4_2:11342446-11342465 | Msa0588870:intron | 25.0% |
| ! | TATTTAATGATACATGGAGT+TGG | - | chr4_2:11342452-11342471 | Msa0588870:intron | 25.0% |
| ! | TGTAAGATTTCATATGTCAT+TGG | + | chr4_2:11342499-11342518 | None:intergenic | 25.0% |
| ! | TGAGACATCAATGTTTAATT+CGG | - | chr4_2:11342538-11342557 | Msa0588870:intron | 25.0% |
| !!! | CTCCAAAATTACACTTTTTT+AGG | + | chr4_2:11342701-11342720 | None:intergenic | 25.0% |
| ! | GTTGATCAATTGTATTCAAA+AGG | + | chr4_2:11342982-11343001 | None:intergenic | 25.0% |
| !!! | TTGATCAACTTAGCTTTATT+CGG | - | chr4_2:11342993-11343012 | Msa0588870:intron | 25.0% |
| !!! | GAATGTTCATAAGTTGATTT+AGG | - | chr4_2:11343051-11343070 | Msa0588870:intron | 25.0% |
| !! | GACATAATCACATTTCTTTT+TGG | - | chr4_2:11343352-11343371 | Msa0588870:intron | 25.0% |
| ! | TGAAATTGAAGCAATACTTA+TGG | - | chr4_2:11343468-11343487 | Msa0588870:intron | 25.0% |
| ! | AACAATCAATGTTAGTTGTT+AGG | + | chr4_2:11343765-11343784 | None:intergenic | 25.0% |
| !!! | CTAAATCACTCATTTTAGAA+TGG | + | chr4_2:11343814-11343833 | None:intergenic | 25.0% |
| !!! | AACCATTTTTTGACAACTTT+TGG | + | chr4_2:11344276-11344295 | None:intergenic | 25.0% |
| ! | CAAATTCACAACAATATTTC+AGG | + | chr4_2:11344428-11344447 | None:intergenic | 25.0% |
| ! | ATTTAGATTTGTAGAGCAAT+AGG | - | chr4_2:11344475-11344494 | Msa0588870:intron | 25.0% |
| !! | GCTTAAAGTTACTTTGATAT+TGG | + | chr4_2:11344511-11344530 | None:intergenic | 25.0% |
| ! | TTAACGAGTTCTTTATAAAG+AGG | - | chr4_2:11344691-11344710 | Msa0588870:intron | 25.0% |
| !!! | TAGAAATTAGGTTTTGTTCT+TGG | + | chr4_2:11344755-11344774 | None:intergenic | 25.0% |
| !! | AATCAAAGGAGGTAATTTTA+GGG | + | chr4_2:11344877-11344896 | None:intergenic | 25.0% |
| !! | AAATCAAAGGAGGTAATTTT+AGG | + | chr4_2:11344878-11344897 | None:intergenic | 25.0% |
| ! | AAGACACCTTCATAAAAATT+AGG | + | chr4_2:11345176-11345195 | None:intergenic | 25.0% |
| ! | AAAGTAGAAATCACACATTA+AGG | - | chr4_2:11345215-11345234 | Msa0588870:intron | 25.0% |
| ! | ATTGCTAAAAAACACCTTTA+TGG | - | chr4_2:11345243-11345262 | Msa0588870:intron | 25.0% |
| ! | TGATGAACAAATATAAAGAG+AGG | + | chr4_2:11345804-11345823 | None:intergenic | 25.0% |
| !! | AAAATGTTGATATGCTACTT+TGG | + | chr4_2:11345895-11345914 | None:intergenic | 25.0% |
| !! | AACAAGTTTAGAACTCAATT+CGG | + | chr4_2:11346217-11346236 | None:intergenic | 25.0% |
| !! | ATGAATTTTGCTTTCATTGA+AGG | - | chr4_2:11341170-11341189 | Msa0588870:CDS | 25.0% |
| !! | TTCATTGAAGGAAAGTATAA+TGG | - | chr4_2:11341182-11341201 | Msa0588870:CDS | 25.0% |
| !! | TCATTGAAGGAAAGTATAAT+GGG | - | chr4_2:11341183-11341202 | Msa0588870:CDS | 25.0% |
| !! | TTAGCTTTTCCTTCTTGTTT+AGG | + | chr4_2:11340926-11340945 | None:intergenic | 30.0% |
| !! | GTTGAGTTTACTTTTGATGA+TGG | + | chr4_2:11341017-11341036 | None:intergenic | 30.0% |
| ! | ATTGACAACCCTTTAACTTT+AGG | - | chr4_2:11341062-11341081 | Msa0588870:CDS | 30.0% |
| CATTGGATTGATTACAAAAC+TGG | - | chr4_2:11341320-11341339 | Msa0588870:intron | 30.0% | |
| TTGGATTGATTACAAAACTG+GGG | - | chr4_2:11341322-11341341 | Msa0588870:intron | 30.0% | |
| !!! | ATTTTAGAATCCACTTGTGT+TGG | - | chr4_2:11341441-11341460 | Msa0588870:intron | 30.0% |
| TGGTCGGTATTAATTTAGAA+AGG | + | chr4_2:11341879-11341898 | None:intergenic | 30.0% | |
| AAACATACATAGGAAGGAAT+AGG | + | chr4_2:11342059-11342078 | None:intergenic | 30.0% | |
| ! | GTGAAAAATGTAATTTTGCG+AGG | - | chr4_2:11342572-11342591 | Msa0588870:intron | 30.0% |
| !!! | GTACCTAGGTTTGTTTTAAT+AGG | - | chr4_2:11342906-11342925 | Msa0588870:intron | 30.0% |
| TGACCTATTAAAACAAACCT+AGG | + | chr4_2:11342912-11342931 | None:intergenic | 30.0% | |
| AAAGGCAACTTAACATACTA+GGG | + | chr4_2:11342964-11342983 | None:intergenic | 30.0% | |
| AAAAGGCAACTTAACATACT+AGG | + | chr4_2:11342965-11342984 | None:intergenic | 30.0% | |
| TAGGTTTCGATGACTATTAT+AGG | - | chr4_2:11343070-11343089 | Msa0588870:intron | 30.0% | |
| ATTAAGCACCAAGACATATT+GGG | - | chr4_2:11343233-11343252 | Msa0588870:intron | 30.0% | |
| ! | TTCTTTGCTACTTGGTAATT+GGG | + | chr4_2:11343316-11343335 | None:intergenic | 30.0% |
| AGTAAAAGACGAAAGTGATA+AGG | - | chr4_2:11343714-11343733 | Msa0588870:intron | 30.0% | |
| GTAAAAGACGAAAGTGATAA+GGG | - | chr4_2:11343715-11343734 | Msa0588870:intron | 30.0% | |
| AATCAATGTTAGTTGTTAGG+AGG | + | chr4_2:11343762-11343781 | None:intergenic | 30.0% | |
| GGTTACGAAAATAATACACA+CGG | - | chr4_2:11343952-11343971 | Msa0588870:intron | 30.0% | |
| !!! | CTTCGTTTGTTTTAATAGCT+GGG | + | chr4_2:11344014-11344033 | None:intergenic | 30.0% |
| !!! | TCTTCGTTTGTTTTAATAGC+TGG | + | chr4_2:11344015-11344034 | None:intergenic | 30.0% |
| ! | TTAAAACAAACGAAGAGTAC+AGG | - | chr4_2:11344019-11344038 | Msa0588870:intron | 30.0% |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr4_2:11344204-11344223 | Msa0588870:intron | 30.0% | |
| GTCCAAAAGTTGTCAAAAAA+TGG | - | chr4_2:11344271-11344290 | Msa0588870:intron | 30.0% | |
| ! | TCTTTTCCCTTTTCAGATTT+TGG | - | chr4_2:11344378-11344397 | Msa0588870:intron | 30.0% |
| ! | TTTTACAATGAACAGGATCA+TGG | + | chr4_2:11344405-11344424 | None:intergenic | 30.0% |
| !!! | TTTCAGGTTTTACAATGAAC+AGG | + | chr4_2:11344412-11344431 | None:intergenic | 30.0% |
| CAAACTGGGTAAATATTTCT+TGG | + | chr4_2:11344621-11344640 | None:intergenic | 30.0% | |
| AGAACTCGTTAATAGTTGAT+TGG | + | chr4_2:11344683-11344702 | None:intergenic | 30.0% | |
| TTGGGAAAAAGGTAGAAATT+AGG | + | chr4_2:11344767-11344786 | None:intergenic | 30.0% | |
| ATGTGAAATCATTGAGTCAT+TGG | + | chr4_2:11344804-11344823 | None:intergenic | 30.0% | |
| ! | AGACAAACTCTAGAAATCAA+AGG | + | chr4_2:11344891-11344910 | None:intergenic | 30.0% |
| CTTTAGATCAATCTTTAGCA+TGG | + | chr4_2:11344950-11344969 | None:intergenic | 30.0% | |
| CATGCTAAAGATTGATCTAA+AGG | - | chr4_2:11344948-11344967 | Msa0588870:intron | 30.0% | |
| ! | ACACCACCTAATTTTTATGA+AGG | - | chr4_2:11345167-11345186 | Msa0588870:intron | 30.0% |
| ACACCTTCATAAAAATTAGG+TGG | + | chr4_2:11345173-11345192 | None:intergenic | 30.0% | |
| TTACTAGAAGTCATCCATAA+AGG | + | chr4_2:11345260-11345279 | None:intergenic | 30.0% | |
| ATAAAAGACACCTTCACAAA+AGG | + | chr4_2:11345377-11345396 | None:intergenic | 30.0% | |
| !! | ACACCAACTTACTTTTATGA+AGG | - | chr4_2:11345426-11345445 | Msa0588870:intron | 30.0% |
| ACACCTTCATAAAAGTAAGT+TGG | + | chr4_2:11345432-11345451 | None:intergenic | 30.0% | |
| AATGAAGTGAAGTGAAATGA+AGG | + | chr4_2:11345827-11345846 | None:intergenic | 30.0% | |
| TAGGAGAGGAAGAATAATAA+TGG | + | chr4_2:11345856-11345875 | None:intergenic | 30.0% | |
| !! | TTAGCTTTTCCTTCTTGTTT+AGG | + | chr4_2:11340926-11340945 | None:intergenic | 30.0% |
| TAGTGGAAAAAATCCAACTT+CGG | - | chr4_2:11346104-11346123 | Msa0588870:intron | 30.0% | |
| !! | GTTGAGTTTACTTTTGATGA+TGG | + | chr4_2:11341017-11341036 | None:intergenic | 30.0% |
| !!! | GTAAACTCAACCACTTTTTT+TGG | - | chr4_2:11346153-11346172 | Msa0588870:CDS | 30.0% |
| ! | ATTGACAACCCTTTAACTTT+AGG | - | chr4_2:11341062-11341081 | Msa0588870:CDS | 30.0% |
| ! | ACAAGTTTAGAACTCAATTC+GGG | + | chr4_2:11346216-11346235 | None:intergenic | 30.0% |
| !! | GAATTGAGTTCTAAACTTGT+TGG | - | chr4_2:11346216-11346235 | Msa0588870:CDS | 30.0% |
| GAACAAAGTGAGGAAATGAT+GGG | + | chr4_2:11340802-11340821 | None:intergenic | 35.0% | |
| AGAACAAAGTGAGGAAATGA+TGG | + | chr4_2:11340803-11340822 | None:intergenic | 35.0% | |
| GAGTGGAAAAAATCCAACTT+CGG | - | chr4_2:11340977-11340996 | Msa0588870:CDS | 35.0% | |
| !!! | GAGTTTACTTTTGATGATGG+TGG | + | chr4_2:11341014-11341033 | None:intergenic | 35.0% |
| GTTCTGGTCCTAAAGTTAAA+GGG | + | chr4_2:11341073-11341092 | None:intergenic | 35.0% | |
| ! | AGTTCTGGTCCTAAAGTTAA+AGG | + | chr4_2:11341074-11341093 | None:intergenic | 35.0% |
| ! | ACAAGTTTAGAACTCAGTTC+TGG | + | chr4_2:11341089-11341108 | None:intergenic | 35.0% |
| !! | GAACTGAGTTCTAAACTTGT+TGG | - | chr4_2:11341089-11341108 | Msa0588870:CDS | 35.0% |
| TCTGCTTCACAAGAAGAAAT+AGG | - | chr4_2:11341134-11341153 | Msa0588870:CDS | 35.0% | |
| ! | GGAGTACTCTTACTATTGTA+GGG | - | chr4_2:11341204-11341223 | Msa0588870:CDS | 35.0% |
| ATCCTGCCATTAATAAGGTT+AGG | - | chr4_2:11341231-11341250 | Msa0588870:CDS | 35.0% | |
| TCCTGCCATTAATAAGGTTA+GGG | - | chr4_2:11341232-11341251 | Msa0588870:CDS | 35.0% | |
| CATCTCCCTAACCTTATTAA+TGG | + | chr4_2:11341240-11341259 | None:intergenic | 35.0% | |
| ATGCTCAAGCTAATACTCAT+TGG | - | chr4_2:11341303-11341322 | Msa0588870:intron | 35.0% | |
| !! | TGGTTTGGTGGTATTAACTT+TGG | - | chr4_2:11341461-11341480 | Msa0588870:intron | 35.0% |
| TCTAGAGAGAATTGAATCAG+AGG | + | chr4_2:11341513-11341532 | None:intergenic | 35.0% | |
| CGTGATATATTATCGGAGAA+TGG | - | chr4_2:11341737-11341756 | Msa0588870:intron | 35.0% | |
| TATCGGAGAATGGAATTACA+AGG | - | chr4_2:11341747-11341766 | Msa0588870:intron | 35.0% | |
| CACTTGTAATTCCATTCTCT+TGG | + | chr4_2:11341846-11341865 | None:intergenic | 35.0% | |
| !! | AAAAAAGCACCAAGTCTTTG+TGG | + | chr4_2:11341926-11341945 | None:intergenic | 35.0% |
| !! | AAGGAATAGGTTGGTTGAAT+GGG | + | chr4_2:11342046-11342065 | None:intergenic | 35.0% |
| ATACATAGGAAGGAATAGGT+TGG | + | chr4_2:11342055-11342074 | None:intergenic | 35.0% | |
| TGTTTAATTCGGCTCACAAA+AGG | - | chr4_2:11342549-11342568 | Msa0588870:intron | 35.0% | |
| GTTTAATTCGGCTCACAAAA+GGG | - | chr4_2:11342550-11342569 | Msa0588870:intron | 35.0% | |
| ! | AATGTAATTTTGCGAGGTAG+AGG | - | chr4_2:11342578-11342597 | Msa0588870:intron | 35.0% |
| !! | GTATTTGTCGACTCTTAACT+AGG | + | chr4_2:11342749-11342768 | None:intergenic | 35.0% |
| AGTCGACAAATACACATGAA+AGG | - | chr4_2:11342756-11342775 | Msa0588870:intron | 35.0% | |
| GTCGACAAATACACATGAAA+GGG | - | chr4_2:11342757-11342776 | Msa0588870:intron | 35.0% | |
| TCTTCTGATTATGAGTACCT+AGG | - | chr4_2:11342892-11342911 | Msa0588870:intron | 35.0% | |
| !!! | TGGTGCTTAATCAGCTTTTT+TGG | + | chr4_2:11343224-11343243 | None:intergenic | 35.0% |
| GATTAAGCACCAAGACATAT+TGG | - | chr4_2:11343232-11343251 | Msa0588870:intron | 35.0% | |
| ! | CTTCTTTGCTACTTGGTAAT+TGG | + | chr4_2:11343317-11343336 | None:intergenic | 35.0% |
| TTACCAAGTAGCAAAGAAGA+AGG | - | chr4_2:11343318-11343337 | Msa0588870:intron | 35.0% | |
| TACCAAGTAGCAAAGAAGAA+GGG | - | chr4_2:11343319-11343338 | Msa0588870:intron | 35.0% | |
| CTAGGGTTAGAAAATGAGTT+GGG | + | chr4_2:11343682-11343701 | None:intergenic | 35.0% | |
| ACTAGGGTTAGAAAATGAGT+TGG | + | chr4_2:11343683-11343702 | None:intergenic | 35.0% | |
| ! | ACTCATTTTCTAACCCTAGT+TGG | - | chr4_2:11343683-11343702 | Msa0588870:intron | 35.0% |
| ! | TTACTCTTTTGCTCCAACTA+GGG | + | chr4_2:11343699-11343718 | None:intergenic | 35.0% |
| ! | TTTACTCTTTTGCTCCAACT+AGG | + | chr4_2:11343700-11343719 | None:intergenic | 35.0% |
| ! | TACAGGAATTTAACTTCCGA+AGG | - | chr4_2:11344036-11344055 | Msa0588870:intron | 35.0% |
| ! | ACAGGAATTTAACTTCCGAA+GGG | - | chr4_2:11344037-11344056 | Msa0588870:intron | 35.0% |
| ! | TCAAATAGTGATTTGCCCTT+CGG | + | chr4_2:11344055-11344074 | None:intergenic | 35.0% |
| ! | CTGAAAAGGGAAAAGACTTT+TGG | + | chr4_2:11344374-11344393 | None:intergenic | 35.0% |
| CATGGACCAAAATCTGAAAA+GGG | + | chr4_2:11344387-11344406 | None:intergenic | 35.0% | |
| TCATGGACCAAAATCTGAAA+AGG | + | chr4_2:11344388-11344407 | None:intergenic | 35.0% | |
| ATCAAACTCTCCTTCATAGT+AGG | + | chr4_2:11344656-11344675 | None:intergenic | 35.0% | |
| !! | TCATTGAGTCATTGGTTCTT+GGG | + | chr4_2:11344796-11344815 | None:intergenic | 35.0% |
| !! | ATCATTGAGTCATTGGTTCT+TGG | + | chr4_2:11344797-11344816 | None:intergenic | 35.0% |
| ! | CAAACTCTAGAAATCAAAGG+AGG | + | chr4_2:11344888-11344907 | None:intergenic | 35.0% |
| ! | ATAGAAGACACCTTTTGTGA+AGG | - | chr4_2:11345364-11345383 | Msa0588870:intron | 35.0% |
| TTGATAAAAGACACCACCAA+AGG | - | chr4_2:11345503-11345522 | Msa0588870:intron | 35.0% | |
| TGATAAAAGACACCACCAAA+GGG | - | chr4_2:11345504-11345523 | Msa0588870:intron | 35.0% | |
| TTATGTTACAAGACACCCTT+TGG | + | chr4_2:11345522-11345541 | None:intergenic | 35.0% | |
| GAGAGGAAGAATAATAATGG+AGG | + | chr4_2:11345853-11345872 | None:intergenic | 35.0% | |
| ATAGTAAAGTAGTGTAGGAG+AGG | + | chr4_2:11345870-11345889 | None:intergenic | 35.0% | |
| TGGAGATAGTAAAGTAGTGT+AGG | + | chr4_2:11345875-11345894 | None:intergenic | 35.0% | |
| GAAATGTTTGGAAGACATTG+TGG | + | chr4_2:11345920-11345939 | None:intergenic | 35.0% | |
| GAACAAAGTGAGGAAATGTT+TGG | + | chr4_2:11345932-11345951 | None:intergenic | 35.0% | |
| TATTGGCATGACATAGTTAG+TGG | - | chr4_2:11346087-11346106 | Msa0588870:CDS | 35.0% | |
| !!! | GAGTTTACTTTTGATGATGG+TGG | + | chr4_2:11341014-11341033 | None:intergenic | 35.0% |
| GCTGACTAAACCAAAAAAAG+TGG | + | chr4_2:11346166-11346185 | None:intergenic | 35.0% | |
| ATTCGGGTCCTAAAGTTAAA+GGG | + | chr4_2:11346200-11346219 | None:intergenic | 35.0% | |
| AATTCGGGTCCTAAAGTTAA+AGG | + | chr4_2:11346201-11346220 | None:intergenic | 35.0% | |
| ! | ATTTTATGCATCTGCTTCAC+AGG | - | chr4_2:11346251-11346270 | Msa0588870:CDS | 35.0% |
| !! | TGGGAGTACTATTACTATCT+TGG | - | chr4_2:11346329-11346348 | Msa0588870:CDS | 35.0% |
| !! | GGGAGTACTATTACTATCTT+GGG | - | chr4_2:11346330-11346349 | Msa0588870:CDS | 35.0% |
| ! | GGAGTACTATTACTATCTTG+GGG | - | chr4_2:11346331-11346350 | Msa0588870:CDS | 35.0% |
| ATCATGCTCGTAATAAGGTT+AGG | - | chr4_2:11346358-11346377 | Msa0588870:CDS | 35.0% | |
| TCATGCTCGTAATAAGGTTA+GGG | - | chr4_2:11346359-11346378 | Msa0588870:CDS | 35.0% | |
| ! | AAAGTGAGGAAATGATGGGA+AGG | + | chr4_2:11340798-11340817 | None:intergenic | 40.0% |
| GAAGGAAGAAGAACAAAGTG+AGG | + | chr4_2:11340812-11340831 | None:intergenic | 40.0% | |
| GTGTGTTGCAAGATATGAGA+AGG | + | chr4_2:11340830-11340849 | None:intergenic | 40.0% | |
| CCTAACAACTTGCGATCTAT+TGG | + | chr4_2:11340903-11340922 | None:intergenic | 40.0% | |
| CCAATAGATCGCAAGTTGTT+AGG | - | chr4_2:11340900-11340919 | Msa0588870:CDS | 40.0% | |
| GTTGTTAGGCCTAAACAAGA+AGG | - | chr4_2:11340914-11340933 | Msa0588870:CDS | 40.0% | |
| TATTGGCATGACATCTTGAG+TGG | - | chr4_2:11340960-11340979 | Msa0588870:CDS | 40.0% | |
| ! | GTAAACTCAACCACTGCTTT+TGG | - | chr4_2:11341026-11341045 | Msa0588870:CDS | 40.0% |
| GTTGACTAAACCAAAAGCAG+TGG | + | chr4_2:11341039-11341058 | None:intergenic | 40.0% | |
| !! | AAACTTGTTGGAAGAGCTCA+AGG | - | chr4_2:11341101-11341120 | Msa0588870:CDS | 40.0% |
| !! | AACTTGTTGGAAGAGCTCAA+GGG | - | chr4_2:11341102-11341121 | Msa0588870:CDS | 40.0% |
| !! | GGGAGTACTCTTACTATTGT+AGG | - | chr4_2:11341203-11341222 | Msa0588870:CDS | 40.0% |
| GTACTCTTACTATTGTAGGG+AGG | - | chr4_2:11341207-11341226 | Msa0588870:CDS | 40.0% | |
| GAGGAATCCTGCCATTAATA+AGG | - | chr4_2:11341226-11341245 | Msa0588870:CDS | 40.0% | |
| TCCCTAACCTTATTAATGGC+AGG | + | chr4_2:11341236-11341255 | None:intergenic | 40.0% | |
| !!! | GGACTTTTCAGATTTGCTAG+AGG | - | chr4_2:11341278-11341297 | Msa0588870:intron | 40.0% |
| !! | AGAATCCACTTGTGTTGGTT+TGG | - | chr4_2:11341446-11341465 | Msa0588870:intron | 40.0% |
| GAATTGAATCAGAGGCTTCA+AGG | + | chr4_2:11341505-11341524 | None:intergenic | 40.0% | |
| ! | TAATTCCATTCTCTTGGTGC+CGG | + | chr4_2:11341840-11341859 | None:intergenic | 40.0% |
| !!! | GGTGCTTTTTTCCATATTCG+TGG | - | chr4_2:11341935-11341954 | Msa0588870:intron | 40.0% |
| ! | TTTCCATATTCGTGGCTCTA+TGG | - | chr4_2:11341943-11341962 | Msa0588870:intron | 40.0% |
| ! | TTCCATATTCGTGGCTCTAT+GGG | - | chr4_2:11341944-11341963 | Msa0588870:intron | 40.0% |
| !! | AGGTTGGTTGAATGGGTTAT+GGG | + | chr4_2:11342039-11342058 | None:intergenic | 40.0% |
| !! | TAGGTTGGTTGAATGGGTTA+TGG | + | chr4_2:11342040-11342059 | None:intergenic | 40.0% |
| !! | GAAGGAATAGGTTGGTTGAA+TGG | + | chr4_2:11342047-11342066 | None:intergenic | 40.0% |
| ! | CTAGAAATCCGTTTTCTGAG+CGG | - | chr4_2:11342780-11342799 | Msa0588870:intron | 40.0% |
| TGAAGGCTAGGGAAATAACT+TGG | - | chr4_2:11342803-11342822 | Msa0588870:intron | 40.0% | |
| GAGACGTGACAACAAGATTA+AGG | + | chr4_2:11342874-11342893 | None:intergenic | 40.0% | |
| ATACTAGGGAGAAGTAGCTA+GGG | + | chr4_2:11342950-11342969 | None:intergenic | 40.0% | |
| ACGTGCATTCAAACCTTCAA+TGG | - | chr4_2:11343164-11343183 | Msa0588870:intron | 40.0% | |
| GATGAGTCTGTAACCATTGA+AGG | + | chr4_2:11343180-11343199 | None:intergenic | 40.0% | |
| TAGCTAAGCCCAATATGTCT+TGG | + | chr4_2:11343244-11343263 | None:intergenic | 40.0% | |
| ATCCCTTCTTCTTTGCTACT+TGG | + | chr4_2:11343324-11343343 | None:intergenic | 40.0% | |
| TATTCGAGCTTGGCTTAGTT+CGG | + | chr4_2:11343657-11343676 | None:intergenic | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | chr4_2:11344214-11344233 | Msa0588870:intron | 40.0% | |
| GGTCATTGTTGGATCAAACT+GGG | + | chr4_2:11344635-11344654 | None:intergenic | 40.0% | |
| AGGTCATTGTTGGATCAAAC+TGG | + | chr4_2:11344636-11344655 | None:intergenic | 40.0% | |
| CCTTCATAGTAGGTCATTGT+TGG | + | chr4_2:11344646-11344665 | None:intergenic | 40.0% | |
| CCAACAATGACCTACTATGA+AGG | - | chr4_2:11344643-11344662 | Msa0588870:intron | 40.0% | |
| TTGGGAAGAGATTGGGAAAA+AGG | + | chr4_2:11344778-11344797 | None:intergenic | 40.0% | |
| ! | TTGGTTCTTGGGAAGAGATT+GGG | + | chr4_2:11344785-11344804 | None:intergenic | 40.0% |
| ! | ATTGGTTCTTGGGAAGAGAT+TGG | + | chr4_2:11344786-11344805 | None:intergenic | 40.0% |
| ! | ATTTGACGAGGGGTTCTTTT+GGG | + | chr4_2:11344846-11344865 | None:intergenic | 40.0% |
| ! | TATTTGACGAGGGGTTCTTT+TGG | + | chr4_2:11344847-11344866 | None:intergenic | 40.0% |
| GAAAAAAGGAGTGGGATGTA+GGG | + | chr4_2:11345765-11345784 | None:intergenic | 40.0% | |
| GAAGGAAGAAGAACAAAGTG+AGG | + | chr4_2:11340812-11340831 | None:intergenic | 40.0% | |
| GTGTGTTACAAGAGATGAGA+AGG | + | chr4_2:11345960-11345979 | None:intergenic | 40.0% | |
| CACACTCACTTCTTCAACAT+CGG | - | chr4_2:11345975-11345994 | Msa0588870:CDS | 40.0% | |
| CCTAACAACTTGCGATCTAT+TGG | + | chr4_2:11340903-11340922 | None:intergenic | 40.0% | |
| CCAATAGATCGCAAGTTGTT+AGG | - | chr4_2:11340900-11340919 | Msa0588870:CDS | 40.0% | |
| GTTGTTAGGCCTAAACAAGA+AGG | - | chr4_2:11340914-11340933 | Msa0588870:CDS | 40.0% | |
| !! | AAACTTGTTGGTAGAGCTCA+AGG | - | chr4_2:11346228-11346247 | Msa0588870:CDS | 40.0% |
| TCTGCTTCACAGGAAGAAAT+AGG | - | chr4_2:11346261-11346280 | Msa0588870:CDS | 40.0% | |
| GTACTATTACTATCTTGGGG+AGG | - | chr4_2:11346334-11346353 | Msa0588870:CDS | 40.0% | |
| GAGGAATCATGCTCGTAATA+AGG | - | chr4_2:11346353-11346372 | Msa0588870:CDS | 40.0% | |
| !!! | GGACTTTTCAGATTTGCTAC+AGG | - | chr4_2:11346405-11346424 | Msa0588870:intron | 40.0% |
| ATGCTCAAGCTAGTACTCAT+TGG | - | chr4_2:11346430-11346449 | Msa0588870:CDS | 40.0% | |
| ATTGGATTGATGCCAAAGCT+GGG | - | chr4_2:11346448-11346467 | Msa0588870:CDS | 40.0% | |
| GGAACAATTGCAACCGAAGT+TGG | + | chr4_2:11340993-11341012 | None:intergenic | 45.0% | |
| !! | ATCCACTTGTGTTGGTTTGG+TGG | - | chr4_2:11341449-11341468 | Msa0588870:intron | 45.0% |
| TACCACCAAACCAACACAAG+TGG | + | chr4_2:11341454-11341473 | None:intergenic | 45.0% | |
| AGATACTCTCTTCAACCTCG+AGG | - | chr4_2:11341799-11341818 | Msa0588870:intron | 45.0% | |
| !! | AATTCCATTCTCTTGGTGCC+GGG | + | chr4_2:11341839-11341858 | None:intergenic | 45.0% |
| ACGTGATATGCGTATGTGGT+CGG | + | chr4_2:11341895-11341914 | None:intergenic | 45.0% | |
| ACCACATACGCATATCACGT+TGG | - | chr4_2:11341895-11341914 | Msa0588870:intron | 45.0% | |
| TTCCCATAGAGCCACGAATA+TGG | + | chr4_2:11341949-11341968 | None:intergenic | 45.0% | |
| !! | GGTTGGTTGAATGGGTTATG+GGG | + | chr4_2:11342038-11342057 | None:intergenic | 45.0% |
| ! | GGTAGTGGCAGACATATTCA+AGG | + | chr4_2:11342632-11342651 | None:intergenic | 45.0% |
| CATACTAGGGAGAAGTAGCT+AGG | + | chr4_2:11342951-11342970 | None:intergenic | 45.0% | |
| GGTTGAGTGTATTTGACGAG+GGG | + | chr4_2:11344856-11344875 | None:intergenic | 45.0% | |
| GGGTTGAGTGTATTTGACGA+GGG | + | chr4_2:11344857-11344876 | None:intergenic | 45.0% | |
| AGGGTTGAGTGTATTTGACG+AGG | + | chr4_2:11344858-11344877 | None:intergenic | 45.0% | |
| TGTTACAAGACACCCTTTGG+TGG | + | chr4_2:11345519-11345538 | None:intergenic | 45.0% | |
| GGAAAAAAGGAGTGGGATGT+AGG | + | chr4_2:11345766-11345785 | None:intergenic | 45.0% | |
| GGAACAATTGCAACCGAAGT+TGG | + | chr4_2:11340993-11341012 | None:intergenic | 45.0% | |
| CATTGGATTGATGCCAAAGC+TGG | - | chr4_2:11346447-11346466 | Msa0588870:CDS | 45.0% | |
| TTGGATTGATGCCAAAGCTG+GGG | - | chr4_2:11346449-11346468 | Msa0588870:CDS | 45.0% | |
| GTTAGGGAGATGCCTGTTGT+TGG | - | chr4_2:11341248-11341267 | Msa0588870:intron | 50.0% | |
| !! | ATGCCTGTTGTTGGTGGTAG+TGG | - | chr4_2:11341257-11341276 | Msa0588870:intron | 50.0% |
| AGTCCACTACCACCAACAAC+AGG | + | chr4_2:11341263-11341282 | None:intergenic | 50.0% | |
| TCAAGGATGAGCACACTCTC+AGG | + | chr4_2:11341488-11341507 | None:intergenic | 50.0% | |
| !! | GAGAGTATCTCTCAACCACG+TGG | + | chr4_2:11341789-11341808 | None:intergenic | 50.0% |
| CTCTTCAACCTCGAGGATCT+TGG | - | chr4_2:11341806-11341825 | Msa0588870:intron | 50.0% | |
| GCCAACGTGATATGCGTATG+TGG | + | chr4_2:11341899-11341918 | None:intergenic | 50.0% | |
| !! | GTTGAATGGGTTATGGGGTG+TGG | + | chr4_2:11342033-11342052 | None:intergenic | 50.0% |
| TGGAGTTGGAGCTCTCAGAA+TGG | - | chr4_2:11342466-11342485 | Msa0588870:intron | 50.0% | |
| ! | ATCCGTTTTCTGAGCGGTGA+AGG | - | chr4_2:11342786-11342805 | Msa0588870:intron | 50.0% |
| AGCCTTCACCGCTCAGAAAA+CGG | + | chr4_2:11342791-11342810 | None:intergenic | 50.0% | |
| ! | TTTTCTGAGCGGTGAAGGCT+AGG | - | chr4_2:11342791-11342810 | Msa0588870:intron | 50.0% |
| TTTCTGAGCGGTGAAGGCTA+GGG | - | chr4_2:11342792-11342811 | Msa0588870:intron | 50.0% | |
| GAGTTGGGCATATTCGAGCT+TGG | + | chr4_2:11343667-11343686 | None:intergenic | 50.0% | |
| !!! | ACGAGGGGTTCTTTTGGGTT+GGG | + | chr4_2:11344841-11344860 | None:intergenic | 50.0% |
| GCGCTACGCAAAACATGAAG+AGG | - | chr4_2:11344919-11344938 | Msa0588870:intron | 50.0% | |
| GTTAGGGAGATGCCTGTTGT+TGG | - | chr4_2:11341248-11341267 | Msa0588870:intron | 50.0% | |
| !! | ATGCCTGTTGTTGGTGGTAG+TGG | - | chr4_2:11341257-11341276 | Msa0588870:intron | 50.0% |
| AGTCCACTACCACCAACAAC+AGG | + | chr4_2:11341263-11341282 | None:intergenic | 50.0% | |
| AACACAAGCATCCCCAGCTT+TGG | + | chr4_2:11346463-11346482 | None:intergenic | 50.0% | |
| AGGGAGATGCCTGTTGTTGG+TGG | - | chr4_2:11341251-11341270 | Msa0588870:intron | 55.0% | |
| TCTCAACCACGTGGCTTCTC+GGG | + | chr4_2:11341780-11341799 | None:intergenic | 55.0% | |
| CTCTCAACCACGTGGCTTCT+CGG | + | chr4_2:11341781-11341800 | None:intergenic | 55.0% | |
| ! | GTCTGGAACCAAGATCCTCG+AGG | + | chr4_2:11341817-11341836 | None:intergenic | 55.0% |
| GAGGATCTTGGTTCCAGACC+CGG | - | chr4_2:11341818-11341837 | Msa0588870:intron | 55.0% | |
| TTGGCCACGCCACAAAGACT+TGG | - | chr4_2:11341914-11341933 | Msa0588870:intron | 55.0% | |
| AGCACCAAGTCTTTGTGGCG+TGG | + | chr4_2:11341921-11341940 | None:intergenic | 55.0% | |
| !! | GTGGCGTGGTTGTTGACTCA+TGG | + | chr4_2:11342014-11342033 | None:intergenic | 55.0% |
| CTGCGTGATGCGCATGATTG+AGG | - | chr4_2:11342605-11342624 | Msa0588870:intron | 55.0% | |
| GTCTGCCACTACCTTGTGCA+CGG | - | chr4_2:11342639-11342658 | Msa0588870:intron | 55.0% | |
| GTCTATGTGCACCGTGCACA+AGG | + | chr4_2:11342653-11342672 | None:intergenic | 55.0% | |
| !! | GACGAGGGGTTCTTTTGGGT+TGG | + | chr4_2:11344842-11344861 | None:intergenic | 55.0% |
| AGGAGTGGGATGTAGGGTCA+AGG | + | chr4_2:11345759-11345778 | None:intergenic | 55.0% | |
| AGGGAGATGCCTGTTGTTGG+TGG | - | chr4_2:11341251-11341270 | Msa0588870:intron | 55.0% | |
| !! | CATTCTCTTGGTGCCGGGTC+TGG | + | chr4_2:11341834-11341853 | None:intergenic | 60.0% |
| CAGACCCGGCACCAAGAGAA+TGG | - | chr4_2:11341832-11341851 | Msa0588870:intron | 60.0% | |
| ! | ATGGGTTATGGGGTGTGGCG+TGG | + | chr4_2:11342028-11342047 | None:intergenic | 60.0% |
| GTGCACCGTGCACAAGGTAG+TGG | + | chr4_2:11342647-11342666 | None:intergenic | 60.0% | |
| CACGTGGCTTCTCGGGAGAC+TGG | + | chr4_2:11341773-11341792 | None:intergenic | 65.0% | |
| CAGTCTCCCGAGAAGCCACG+TGG | - | chr4_2:11341771-11341790 | Msa0588870:intron | 65.0% | |
| TGGGTGTGTGCATCGCGCAG+TGG | + | chr4_2:11342675-11342694 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 11340792 | 11346512 | 11340792 | ID=Msa0588870;Name=Msa0588870 |
| chr4_2 | mRNA | 11340792 | 11346512 | 11340792 | ID=Msa0588870-mRNA-1;Parent=Msa0588870;Name=Msa0588870-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0|0|4|0|334 |
| chr4_2 | exon | 11346407 | 11346512 | 11346407 | ID=Msa0588870-mRNA-1:exon:3308;Parent=Msa0588870-mRNA-1 |
| chr4_2 | exon | 11346149 | 11346397 | 11346149 | ID=Msa0588870-mRNA-1:exon:3307;Parent=Msa0588870-mRNA-1 |
| chr4_2 | exon | 11345934 | 11346112 | 11345934 | ID=Msa0588870-mRNA-1:exon:3306;Parent=Msa0588870-mRNA-1 |
| chr4_2 | exon | 11340792 | 11341262 | 11340792 | ID=Msa0588870-mRNA-1:exon:3305;Parent=Msa0588870-mRNA-1 |
| chr4_2 | CDS | 11346407 | 11346512 | 11346407 | ID=Msa0588870-mRNA-1:cds;Parent=Msa0588870-mRNA-1 |
| chr4_2 | CDS | 11346149 | 11346397 | 11346149 | ID=Msa0588870-mRNA-1:cds;Parent=Msa0588870-mRNA-1 |
| chr4_2 | CDS | 11345934 | 11346112 | 11345934 | ID=Msa0588870-mRNA-1:cds;Parent=Msa0588870-mRNA-1 |
| chr4_2 | CDS | 11340792 | 11341262 | 11340792 | ID=Msa0588870-mRNA-1:cds;Parent=Msa0588870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
