AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1461550


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1461550 MtrunA17_Chr7g0235051 71.338 471 77 4 1 417 1 467 0.0 641
Msa1461550 MtrunA17_Chr7g0243851 69.499 459 95 3 1 417 1 456 0.0 638
Msa1461550 MtrunA17_Chr4g0060511 92.835 321 21 1 97 417 183 501 0.0 615
Msa1461550 MtrunA17_Chr4g0060511 89.565 115 7 1 1 110 1 115 7.79e-64 213
Msa1461550 MtrunA17_Chr7g0243951 76.947 321 71 2 97 417 180 497 3.98e-180 511
Msa1461550 MtrunA17_Chr7g0243951 71.304 115 25 2 1 110 1 112 1.41e-45 164
Msa1461550 MtrunA17_Chr7g0243931 75.701 321 76 1 97 417 186 504 1.09e-179 510
Msa1461550 MtrunA17_Chr7g0243931 68.696 115 28 2 1 110 7 118 2.83e-42 155
Msa1461550 MtrunA17_Chr7g0243861 77.882 321 69 1 97 417 183 501 2.76e-178 506
Msa1461550 MtrunA17_Chr7g0243861 72.807 114 23 2 2 110 5 115 6.68e-47 168
Msa1461550 MtrunA17_Chr7g0243631 76.282 312 72 2 107 417 190 500 3.43e-174 496
Msa1461550 MtrunA17_Chr7g0243631 72.414 116 22 3 1 109 1 113 6.08e-46 165
Msa1461550 MtrunA17_Chr7g0243681 76.206 311 67 2 107 416 188 492 9.47e-172 489
Msa1461550 MtrunA17_Chr7g0243681 75.439 114 20 2 1 109 1 111 5.56e-49 173
Msa1461550 MtrunA17_Chr7g0243771 73.529 306 77 1 107 412 183 484 2.92e-167 478
Msa1461550 MtrunA17_Chr7g0243771 74.074 108 20 2 8 110 3 107 2.20e-46 166
Msa1461550 MtrunA17_Chr7g0243801 72.876 306 79 1 107 412 184 485 1.17e-165 474
Msa1461550 MtrunA17_Chr7g0243801 73.043 115 19 3 1 110 1 108 1.58e-46 167
Msa1461550 MtrunA17_Chr7g0243761 72.026 311 57 2 107 417 188 468 2.92e-151 436
Msa1461550 MtrunA17_Chr7g0243761 73.913 115 22 2 1 110 1 112 4.28e-49 173
Msa1461550 MtrunA17_Chr7g0243871 66.997 303 90 1 108 410 187 479 8.26e-148 428
Msa1461550 MtrunA17_Chr7g0243871 65.217 115 30 3 1 110 1 110 1.86e-40 150
Msa1461550 MtrunA17_Chr7g0243711 77.432 257 57 1 161 417 75 330 1.93e-142 409
Msa1461550 MtrunA17_Chr7g0243711 81.013 79 10 1 1 74 1 79 6.20e-36 134
Msa1461550 MtrunA17_Chr7g0243781 65.161 310 97 3 108 415 187 487 2.07e-141 412
Msa1461550 MtrunA17_Chr7g0243781 64.348 115 31 3 1 110 1 110 7.26e-38 143
Msa1461550 MtrunA17_Chr7g0243611 76.543 243 56 1 113 355 55 296 3.63e-135 389
Msa1461550 MtrunA17_Chr8g0355221 55.046 327 142 4 85 410 171 493 7.93e-121 360
Msa1461550 MtrunA17_Chr8g0355221 39.535 129 66 5 5 126 9 132 2.93e-17 83.6
Msa1461550 MtrunA17_Chr7g0243911 79.612 206 42 0 183 388 10 215 1.84e-116 339
Msa1461550 MtrunA17_Chr5g0401851 55.410 305 134 2 108 411 188 491 2.83e-116 348
Msa1461550 MtrunA17_Chr5g0401851 38.621 145 80 3 5 143 4 145 5.32e-21 95.1
Msa1461550 MtrunA17_Chr1g0165701 54.217 332 144 6 85 415 171 495 3.78e-116 348
Msa1461550 MtrunA17_Chr1g0165701 40.310 129 65 5 5 126 9 132 2.45e-17 84.0
Msa1461550 MtrunA17_Chr7g0243811 65.106 235 73 1 108 342 162 387 8.05e-110 328
Msa1461550 MtrunA17_Chr7g0243811 61.290 93 28 2 23 110 1 90 1.59e-26 110
Msa1461550 MtrunA17_Chr5g0416741 55.556 315 134 5 93 407 179 487 5.74e-109 330
Msa1461550 MtrunA17_Chr5g0416741 45.217 115 54 3 1 109 2 113 4.29e-22 98.2
Msa1461550 MtrunA17_Chr6g0463891 46.237 372 161 5 43 413 161 494 1.60e-104 318
Msa1461550 MtrunA17_Chr6g0463891 53.333 105 41 2 10 109 11 112 1.19e-25 108
Msa1461550 MtrunA17_Chr5g0416821 51.307 306 132 4 109 413 194 483 1.94e-98 302
Msa1461550 MtrunA17_Chr5g0416821 40.000 105 55 2 10 109 13 114 3.20e-15 77.4
Msa1461550 MtrunA17_Chr7g0231631 53.846 273 109 4 135 407 8 263 6.87e-87 265
Msa1461550 MtrunA17_Chr4g0044511 51.254 279 127 6 129 405 235 506 3.99e-85 268
Msa1461550 MtrunA17_Chr4g0044511 38.462 104 60 2 7 109 36 136 8.94e-18 85.1
Msa1461550 MtrunA17_Chr4g0066201 37.474 483 210 13 7 411 14 482 1.41e-84 266
Msa1461550 MtrunA17_Chr4g0044481 39.687 383 168 8 11 336 27 403 1.55e-84 265
Msa1461550 MtrunA17_Chr4g0044521 36.809 470 220 11 8 406 6 469 2.07e-83 263
Msa1461550 MtrunA17_Chr4g0014061 33.682 478 238 8 10 412 8 481 5.82e-81 257
Msa1461550 MtrunA17_Chr4g0044501 49.485 291 134 9 116 406 201 478 1.76e-80 256
Msa1461550 MtrunA17_Chr4g0044501 31.410 156 91 4 1 141 1 155 6.08e-16 79.7
Msa1461550 MtrunA17_Chr8g0366391 43.844 333 160 9 91 415 176 489 3.19e-80 255
Msa1461550 MtrunA17_Chr8g0366391 35.965 114 63 3 1 109 1 109 4.04e-14 73.9
Msa1461550 MtrunA17_Chr4g0066281 44.850 301 152 5 119 412 182 475 5.32e-77 246
Msa1461550 MtrunA17_Chr4g0066281 46.875 96 47 2 14 108 15 107 1.71e-18 87.4
Msa1461550 MtrunA17_Chr4g0066261 44.937 316 161 8 104 412 181 490 4.39e-76 244
Msa1461550 MtrunA17_Chr4g0066261 41.964 112 59 2 1 109 1 109 1.47e-19 90.5
Msa1461550 MtrunA17_Chr5g0419771 47.735 287 138 7 127 407 236 516 3.00e-75 243
Msa1461550 MtrunA17_Chr5g0419771 35.965 114 64 3 1 109 27 136 5.86e-15 76.6
Msa1461550 MtrunA17_Chr4g0011051 41.216 296 168 4 115 407 199 491 7.66e-75 241
Msa1461550 MtrunA17_Chr4g0011051 50.000 80 34 3 9 82 7 86 5.26e-14 73.6
Msa1461550 MtrunA17_Chr8g0374901 45.455 297 152 4 123 412 194 487 8.26e-74 238
Msa1461550 MtrunA17_Chr8g0374901 40.385 104 54 3 9 109 12 110 4.03e-16 80.1
Msa1461550 MtrunA17_Chr8g0374971 45.424 295 151 4 125 412 198 489 1.83e-73 238
Msa1461550 MtrunA17_Chr8g0374971 42.718 103 53 2 10 109 11 110 5.71e-18 85.9
Msa1461550 MtrunA17_Chr4g0066221 42.675 314 168 5 107 412 180 489 8.46e-73 236
Msa1461550 MtrunA17_Chr4g0066221 46.847 111 53 2 1 108 1 108 6.22e-26 109
Msa1461550 MtrunA17_Chr4g0066151 44.781 297 148 7 124 410 196 486 1.74e-72 235
Msa1461550 MtrunA17_Chr4g0066151 43.564 101 53 2 10 109 17 114 1.81e-16 81.3
Msa1461550 MtrunA17_Chr4g0066171 33.539 486 238 12 1 412 11 485 2.08e-72 235
Msa1461550 MtrunA17_Chr8g0350881 44.147 299 157 4 121 412 194 489 2.85e-71 232
Msa1461550 MtrunA17_Chr8g0350881 42.202 109 55 3 10 115 11 114 3.10e-19 89.7
Msa1461550 MtrunA17_Chr1g0179901 43.643 291 155 6 125 410 214 500 8.67e-71 231
Msa1461550 MtrunA17_Chr1g0179901 35.965 114 64 3 1 109 7 116 6.30e-16 79.7
Msa1461550 MtrunA17_Chr4g0066131 42.667 300 154 7 124 412 191 483 6.82e-69 226
Msa1461550 MtrunA17_Chr4g0066131 42.574 101 54 2 10 109 12 109 9.67e-15 75.9
Msa1461550 MtrunA17_Chr6g0463861 41.137 299 160 8 119 407 185 477 5.00e-68 223
Msa1461550 MtrunA17_Chr6g0463861 37.719 114 61 3 1 107 1 111 3.75e-14 73.9
Msa1461550 MtrunA17_Chr6g0463851 41.693 319 166 7 98 404 173 483 7.43e-68 223
Msa1461550 MtrunA17_Chr6g0463851 37.838 111 63 2 1 108 1 108 3.75e-15 77.0
Msa1461550 MtrunA17_Chr7g0265101 41.176 289 162 5 127 412 210 493 9.23e-68 223
Msa1461550 MtrunA17_Chr7g0265101 40.625 96 50 4 9 97 7 102 6.06e-13 70.5
Msa1461550 MtrunA17_Chr8g0374941 44.040 302 159 5 116 410 1126 1424 9.86e-68 233
Msa1461550 MtrunA17_Chr8g0374941 43.636 275 145 5 122 389 194 465 1.41e-60 213
Msa1461550 MtrunA17_Chr8g0374941 45.387 271 138 4 122 385 659 926 4.75e-60 211
Msa1461550 MtrunA17_Chr8g0374941 41.525 118 61 3 1 115 1 113 3.31e-19 90.5
Msa1461550 MtrunA17_Chr8g0374941 43.636 110 52 4 9 115 949 1051 3.35e-18 87.4
Msa1461550 MtrunA17_Chr8g0374941 39.831 118 63 3 1 115 466 578 1.86e-17 85.1
Msa1461550 MtrunA17_Chr7g0265051 41.608 286 160 4 129 412 211 491 1.11e-67 223
Msa1461550 MtrunA17_Chr7g0265051 43.182 88 42 4 1 82 1 86 3.78e-12 67.8
Msa1461550 MtrunA17_Chr7g0275681 42.908 282 154 4 123 403 205 480 1.37e-67 222
Msa1461550 MtrunA17_Chr7g0275681 40.741 108 56 2 7 109 8 112 2.81e-15 77.4
Msa1461550 MtrunA17_Chr7g0265151 41.935 279 154 6 130 403 208 483 1.51e-67 222
Msa1461550 MtrunA17_Chr7g0265151 39.048 105 59 3 1 102 1 103 4.15e-14 73.9
Msa1461550 MtrunA17_Chr5g0419761 43.197 294 154 8 123 408 205 493 7.40e-67 221
Msa1461550 MtrunA17_Chr5g0419761 40.909 110 56 4 5 109 4 109 4.00e-13 70.9
Msa1461550 MtrunA17_Chr8g0374931 42.765 311 151 9 115 410 190 488 4.39e-65 216
Msa1461550 MtrunA17_Chr8g0374931 37.500 112 64 2 1 109 1 109 7.64e-16 79.3
Msa1461550 MtrunA17_Chr7g0218311 40.312 320 165 7 107 412 185 492 5.00e-65 216
Msa1461550 MtrunA17_Chr7g0218311 37.615 109 60 3 10 115 15 118 1.27e-13 72.4
Msa1461550 MtrunA17_Chr7g0265041 37.405 393 188 13 22 403 143 488 5.06e-65 216
Msa1461550 MtrunA17_Chr7g0265041 41.818 110 59 1 1 105 1 110 2.20e-16 80.9
Msa1461550 MtrunA17_Chr5g0428081 43.051 295 149 6 127 410 200 486 2.60e-64 214
Msa1461550 MtrunA17_Chr5g0428081 34.259 108 68 1 1 108 1 105 1.08e-14 75.9
Msa1461550 MtrunA17_Chr7g0265111 44.637 289 150 7 131 413 241 525 6.03e-64 214
Msa1461550 MtrunA17_Chr7g0265111 42.353 85 44 1 3 82 31 115 1.10e-15 79.0
Msa1461550 MtrunA17_Chr5g0410941 40.391 307 164 6 115 410 198 496 8.54e-64 213
Msa1461550 MtrunA17_Chr5g0410941 40.367 109 61 2 1 109 13 117 5.10e-16 79.7
Msa1461550 MtrunA17_Chr7g0265141 43.509 285 139 8 129 402 211 484 1.15e-63 212
Msa1461550 MtrunA17_Chr7g0265141 35.088 114 64 3 1 109 1 109 1.22e-13 72.4
Msa1461550 MtrunA17_Chr2g0294931 42.000 300 149 7 127 412 202 490 9.82e-62 207
Msa1461550 MtrunA17_Chr2g0294931 38.739 111 62 2 1 108 1 108 7.89e-17 82.4
Msa1461550 MtrunA17_Chr2g0294921 41.935 310 155 9 115 410 339 637 1.84e-60 207
Msa1461550 MtrunA17_Chr2g0294921 38.393 112 63 2 1 109 150 258 7.45e-15 76.6
Msa1461550 MtrunA17_Chr7g0243721 66.906 139 45 1 107 245 3 140 9.69e-58 186
Msa1461550 MtrunA17_Chr2g0294941 41.071 280 140 8 123 388 96 364 6.11e-57 191
Msa1461550 MtrunA17_Chr8g0357361 37.419 310 140 9 41 345 4 264 1.55e-53 179
Msa1461550 MtrunA17_Chr7g0243921 75.439 114 20 2 2 110 31 141 4.87e-51 172
Msa1461550 MtrunA17_Chr7g0232411 36.061 330 160 11 104 406 163 468 8.91e-50 175
Msa1461550 MtrunA17_Chr1g0159551 39.777 269 131 8 134 392 201 448 8.91e-49 172
Msa1461550 MtrunA17_Chr4g0066141 34.021 388 207 10 39 412 8 360 1.49e-48 169
Msa1461550 MtrunA17_Chr7g0232391 38.849 278 133 8 136 399 207 461 7.80e-48 169
Msa1461550 MtrunA17_Chr1g0173121 37.415 294 142 10 109 392 190 451 8.23e-47 167
Msa1461550 MtrunA17_Chr8g0361411 39.007 282 152 6 127 407 195 457 2.92e-46 165
Msa1461550 MtrunA17_Chr5g0440421 32.226 301 181 5 112 406 210 493 3.77e-46 166
Msa1461550 MtrunA17_Chr6g0449931 37.954 303 143 10 124 406 193 470 3.80e-46 165
Msa1461550 MtrunA17_Chr6g0454271 34.114 299 173 8 109 403 8 286 2.57e-45 158
Msa1461550 MtrunA17_Chr6g0454201 34.219 301 170 9 109 403 202 480 2.95e-45 163
Msa1461550 MtrunA17_Chr2g0307961 36.559 279 153 8 127 403 212 468 1.09e-44 161
Msa1461550 MtrunA17_Chr6g0462551 36.066 305 159 9 108 401 183 462 1.74e-44 161
Msa1461550 MtrunA17_Chr6g0454341 34.000 300 173 9 109 403 198 477 2.04e-44 160
Msa1461550 MtrunA17_Chr3g0078841 31.053 380 225 12 40 403 119 477 5.46e-44 159
Msa1461550 MtrunA17_Chr8g0336651 35.625 320 150 9 107 399 949 1239 8.32e-44 164
Msa1461550 MtrunA17_Chr8g0336651 36.861 274 129 6 136 407 547 778 2.50e-40 153
Msa1461550 MtrunA17_Chr8g0336651 35.370 311 159 11 107 399 174 460 9.69e-40 152
Msa1461550 MtrunA17_Chr8g0382021 35.211 284 153 7 128 400 222 485 1.41e-43 159
Msa1461550 MtrunA17_Chr1g0207931 27.232 448 243 13 5 404 86 498 2.21e-43 158
Msa1461550 MtrunA17_Chr6g0454361 32.776 299 177 8 109 403 202 480 2.33e-43 158
Msa1461550 MtrunA17_Chr8g0336691 36.624 314 153 11 107 399 1087 1375 2.39e-43 162
Msa1461550 MtrunA17_Chr8g0336691 35.494 324 159 11 107 407 181 477 3.42e-43 162
Msa1461550 MtrunA17_Chr8g0336691 35.065 308 154 10 107 407 648 916 8.55e-38 146
Msa1461550 MtrunA17_Chr6g0454141 32.441 299 178 8 109 403 201 479 3.02e-43 157
Msa1461550 MtrunA17_Chr7g0275511 35.737 319 155 13 99 399 185 471 3.75e-43 157
Msa1461550 MtrunA17_Chr7g0232341 36.585 287 146 8 136 408 207 471 3.87e-43 157
Msa1461550 MtrunA17_Chr6g0454291 33.110 299 176 8 109 403 198 476 4.09e-43 157
Msa1461550 MtrunA17_Chr7g0232331 37.193 285 143 9 136 406 207 469 4.89e-43 157
Msa1461550 MtrunA17_Chr7g0243731 83.750 80 13 0 260 339 1 80 5.43e-43 145
Msa1461550 MtrunA17_Chr3g0121991 34.532 278 165 5 137 408 284 550 8.67e-43 157
Msa1461550 MtrunA17_Chr8g0361371 34.752 282 141 7 136 400 212 467 9.68e-43 156
Msa1461550 MtrunA17_Chr3g0098111 32.143 280 173 6 128 405 207 471 1.00e-42 156
Msa1461550 MtrunA17_Chr8g0335161 36.000 275 142 6 136 399 211 462 1.11e-42 155
Msa1461550 MtrunA17_Chr5g0423981 32.441 299 178 8 109 403 166 444 1.55e-42 155
Msa1461550 MtrunA17_Chr6g0454261 35.357 280 159 9 133 411 228 486 1.62e-42 155
Msa1461550 MtrunA17_Chr6g0459311 35.636 275 142 6 136 399 217 467 2.16e-42 155
Msa1461550 MtrunA17_Chr1g0153461 40.435 230 105 6 193 406 2 215 3.19e-42 148
Msa1461550 MtrunA17_Chr6g0454301 32.215 298 181 6 109 403 451 730 3.57e-42 158
Msa1461550 MtrunA17_Chr6g0454301 34.568 243 137 7 162 402 6 228 1.03e-34 136
Msa1461550 MtrunA17_Chr5g0414321 26.737 475 262 15 1 408 1 456 4.81e-42 154
Msa1461550 MtrunA17_Chr7g0217881 33.223 301 173 10 109 403 183 461 8.37e-42 153
Msa1461550 MtrunA17_Chr6g0454401 33.445 299 175 8 109 403 202 480 8.84e-42 154
Msa1461550 MtrunA17_Chr6g0454331 32.107 299 179 8 109 403 200 478 9.20e-42 154
Msa1461550 MtrunA17_Chr8g0335141 34.752 282 150 6 136 406 213 471 1.10e-41 153
Msa1461550 MtrunA17_Chr8g0377921 35.789 285 167 5 121 401 189 461 1.26e-41 153
Msa1461550 MtrunA17_Chr8g0339451 35.540 287 138 8 134 399 199 459 1.73e-41 152
Msa1461550 MtrunA17_Chr6g0486251 36.232 276 139 7 136 399 210 460 1.82e-41 152
Msa1461550 MtrunA17_Chr6g0486201 36.232 276 139 7 136 399 210 460 1.82e-41 152
Msa1461550 MtrunA17_Chr5g0448521 34.050 279 163 6 133 401 198 465 2.49e-41 152
Msa1461550 MtrunA17_Chr3g0079731 29.909 331 178 8 95 400 176 477 3.11e-41 152
Msa1461550 MtrunA17_Chr6g0454151 34.799 273 155 8 133 403 226 477 3.57e-41 152
Msa1461550 MtrunA17_Chr8g0339631 34.828 290 147 8 134 406 207 471 8.92e-41 150
Msa1461550 MtrunA17_Chr6g0464881 34.672 274 156 8 137 408 207 459 1.05e-40 150
Msa1461550 MtrunA17_Chr7g0232311 33.692 279 146 6 136 400 207 460 1.09e-40 150
Msa1461550 MtrunA17_Chr8g0339601 35.612 278 132 8 134 390 66 317 1.21e-40 147
Msa1461550 MtrunA17_Chr6g0454191 33.223 301 173 10 109 403 202 480 1.26e-40 150
Msa1461550 MtrunA17_Chr8g0359821 32.558 301 176 9 110 403 197 477 1.38e-40 150
Msa1461550 MtrunA17_Chr8g0373301 34.906 318 162 11 107 405 177 468 1.57e-40 150
Msa1461550 MtrunA17_Chr8g0336331 28.571 378 237 9 40 403 118 476 1.66e-40 150
Msa1461550 MtrunA17_Chr6g0454181 31.333 300 180 8 109 403 201 479 1.72e-40 150
Msa1461550 MtrunA17_Chr6g0454321 31.399 293 180 6 109 398 198 472 1.80e-40 152
Msa1461550 MtrunA17_Chr6g0454121 34.066 273 157 8 133 403 227 478 2.32e-40 150
Msa1461550 MtrunA17_Chr4g0050341 35.314 303 171 8 109 404 207 491 4.72e-40 149
Msa1461550 MtrunA17_Chr3g0122001 35.971 278 151 9 137 403 691 952 5.67e-40 152
Msa1461550 MtrunA17_Chr3g0122001 33.813 278 164 7 137 406 211 476 7.44e-38 146
Msa1461550 MtrunA17_Chr7g0249931 32.593 270 155 8 138 403 237 483 5.73e-40 149
Msa1461550 MtrunA17_Chr8g0334831 34.981 263 124 7 136 376 211 448 5.79e-40 149
Msa1461550 MtrunA17_Chr6g0454221 34.025 241 142 4 162 402 6 229 7.58e-40 144
Msa1461550 MtrunA17_Chr6g0464861 32.895 304 174 9 107 403 173 453 8.23e-40 147
Msa1461550 MtrunA17_Chr8g0347281 35.971 278 138 8 136 399 217 468 9.86e-40 148
Msa1461550 MtrunA17_Chr3g0118721 36.000 275 152 9 133 403 35 289 1.38e-39 143
Msa1461550 MtrunA17_Chr6g0454131 32.721 272 162 7 133 403 227 478 1.57e-39 147
Msa1461550 MtrunA17_Chr8g0339461 35.000 280 135 8 134 392 207 460 1.71e-39 147
Msa1461550 MtrunA17_Chr6g0453951 31.438 299 179 9 110 403 249 526 1.97e-39 148
Msa1461550 MtrunA17_Chr1g0153451 35.971 278 139 9 136 399 207 459 2.61e-39 146
Msa1461550 MtrunA17_Chr6g0453961 31.894 301 177 10 109 403 211 489 2.76e-39 147
Msa1461550 MtrunA17_Chr8g0370941 37.759 241 115 6 183 396 249 481 2.93e-39 147
Msa1461550 MtrunA17_Chr8g0339441 39.545 220 106 4 195 399 218 425 3.61e-39 145
Msa1461550 MtrunA17_Chr7g0250001 32.740 281 160 8 128 403 191 447 3.88e-39 146
Msa1461550 MtrunA17_Chr3g0118691 35.636 275 153 9 133 403 228 482 4.68e-39 146
Msa1461550 MtrunA17_Chr6g0464841 32.450 302 174 9 109 403 176 454 4.99e-39 145
Msa1461550 MtrunA17_Chr3g0118701 33.631 336 191 13 78 403 169 482 7.74e-39 145
Msa1461550 MtrunA17_Chr6g0462521 36.594 276 136 9 136 399 201 449 7.85e-39 145
Msa1461550 MtrunA17_Chr2g0278711 33.571 280 169 5 129 407 217 480 8.39e-39 145
Msa1461550 MtrunA17_Chr2g0329111 33.208 265 152 5 132 389 213 459 1.62e-38 145
Msa1461550 MtrunA17_Chr3g0118671 36.462 277 148 9 133 403 219 473 1.88e-38 144
Msa1461550 MtrunA17_Chr3g0118771 35.870 276 153 9 132 403 233 488 2.47e-38 144
Msa1461550 MtrunA17_Chr6g0454211 31.773 299 180 8 109 403 488 766 3.40e-38 146
Msa1461550 MtrunA17_Chr6g0454211 31.844 179 78 6 133 307 98 236 4.96e-18 86.7
Msa1461550 MtrunA17_Chr6g0452771 32.353 272 163 7 133 403 228 479 4.39e-38 143
Msa1461550 MtrunA17_Chr1g0207971 30.108 279 172 7 132 409 203 459 5.67e-38 142
Msa1461550 MtrunA17_Chr8g0347271 35.971 278 138 9 136 399 218 469 6.07e-38 143
Msa1461550 MtrunA17_Chr7g0232401 34.386 285 147 9 136 405 210 469 6.28e-38 143
Msa1461550 MtrunA17_Chr8g0336741 36.559 279 137 9 136 399 214 467 6.57e-38 143
Msa1461550 MtrunA17_Chr5g0403641 31.900 279 160 5 136 399 235 498 7.60e-38 143
Msa1461550 MtrunA17_Chr8g0336731 36.201 279 140 10 136 400 233 487 8.47e-38 143
Msa1461550 MtrunA17_Chr6g0464921 34.572 269 154 7 137 403 207 455 8.61e-38 142
Msa1461550 MtrunA17_Chr5g0414331 33.459 266 155 8 140 403 208 453 2.13e-37 141
Msa1461550 MtrunA17_Chr3g0112771 33.101 287 154 8 133 411 203 459 2.53e-37 141
Msa1461550 MtrunA17_Chr7g0218831 36.019 211 116 5 190 400 245 436 2.83e-37 140
Msa1461550 MtrunA17_Chr5g0442541 34.797 296 136 10 133 401 198 463 3.14e-37 141
Msa1461550 MtrunA17_Chr8g0334851 33.333 294 146 8 136 408 210 474 3.50e-37 141
Msa1461550 MtrunA17_Chr5g0442581 35.252 278 155 6 136 401 210 474 3.95e-37 142
Msa1461550 MtrunA17_Chr6g0464871 32.491 277 166 6 128 403 210 466 4.83e-37 140
Msa1461550 MtrunA17_Chr5g0442561 33.688 282 152 8 136 401 208 470 6.27e-37 140
Msa1461550 MtrunA17_Chr1g0207981 30.492 305 192 8 102 403 185 472 7.66e-37 140
Msa1461550 MtrunA17_Chr6g0462541 39.545 220 110 5 189 401 258 461 8.90e-37 140
Msa1461550 MtrunA17_Chr5g0412101 34.432 273 151 10 138 405 223 472 1.16e-36 139
Msa1461550 MtrunA17_Chr5g0442491 35.000 300 150 10 123 401 197 472 1.25e-36 139
Msa1461550 MtrunA17_Chr3g0118711 35.036 274 156 8 133 403 226 480 1.26e-36 139
Msa1461550 MtrunA17_Chr5g0412131 34.909 275 151 10 136 405 220 471 1.95e-36 139
Msa1461550 MtrunA17_Chr7g0249961 35.470 234 124 7 172 403 51 259 2.39e-36 134
Msa1461550 MtrunA17_Chr6g0454171 30.159 315 178 10 94 403 32 309 2.70e-36 135
Msa1461550 MtrunA17_Chr7g0249981 32.353 272 153 7 138 403 220 466 2.76e-36 139
Msa1461550 MtrunA17_Chr6g0462571 33.935 277 147 6 134 401 210 459 3.09e-36 138
Msa1461550 MtrunA17_Chr6g0462531 40.000 215 111 7 191 399 261 463 3.99e-36 138
Msa1461550 MtrunA17_Chr1g0207861 29.617 287 171 7 128 405 206 470 4.42e-36 138
Msa1461550 MtrunA17_Chr1g0161351 29.066 289 174 7 128 407 235 501 5.15e-36 138
Msa1461550 MtrunA17_Chr1g0207951 32.000 275 160 9 132 403 858 1108 5.39e-36 140
Msa1461550 MtrunA17_Chr1g0207951 30.292 274 167 8 132 404 321 571 5.24e-35 137
Msa1461550 MtrunA17_Chr5g0412111 32.740 281 160 9 129 405 208 463 6.11e-36 137
Msa1461550 MtrunA17_Chr7g0218821 36.792 212 115 5 190 401 256 448 6.20e-36 137
Msa1461550 MtrunA17_Chr8g0365811 31.915 282 167 11 132 405 695 959 1.10e-35 139
Msa1461550 MtrunA17_Chr8g0365811 30.126 239 133 8 132 357 213 430 2.58e-29 120
Msa1461550 MtrunA17_Chr5g0442521 33.569 283 159 8 133 401 206 473 1.25e-35 137
Msa1461550 MtrunA17_Chr8g0334861 32.979 282 147 8 136 400 204 460 1.57e-35 136
Msa1461550 MtrunA17_Chr8g0369341 31.773 299 171 8 115 406 199 471 1.83e-35 136
Msa1461550 MtrunA17_Chr7g0218841 35.545 211 117 5 190 400 246 437 2.87e-35 135
Msa1461550 MtrunA17_Chr5g0426401 37.945 253 130 12 133 379 57 288 2.87e-35 132
Msa1461550 MtrunA17_Chr7g0218811 32.955 264 143 8 138 401 218 447 4.68e-35 134
Msa1461550 MtrunA17_Chr8g0380531 30.820 305 184 9 108 404 173 458 5.73e-35 134
Msa1461550 MtrunA17_Chr8g0377941 29.904 311 185 6 100 403 177 461 7.29e-35 134
Msa1461550 MtrunA17_Chr1g0207831 29.225 284 168 9 128 404 207 464 1.18e-34 134
Msa1461550 MtrunA17_Chr5g0442601 34.164 281 162 7 133 403 608 875 1.70e-34 136
Msa1461550 MtrunA17_Chr5g0442601 33.333 243 128 8 105 330 108 333 3.95e-24 105
Msa1461550 MtrunA17_Chr5g0426431 34.641 306 167 14 108 403 195 477 1.85e-34 133
Msa1461550 MtrunA17_Chr4g0053321 34.211 228 134 3 191 412 275 492 2.84e-34 133
Msa1461550 MtrunA17_Chr5g0442511 32.509 283 160 8 136 404 229 494 2.50e-33 130
Msa1461550 MtrunA17_Chr5g0409591 34.802 227 118 6 174 385 258 469 3.58e-33 130
Msa1461550 MtrunA17_Chr3g0112761 31.290 310 178 8 107 406 168 452 4.67e-33 129
Msa1461550 MtrunA17_Chr3g0079711 37.629 194 96 4 221 400 3 185 4.74e-33 122
Msa1461550 MtrunA17_Chr6g0454351 30.769 299 166 9 109 403 203 464 6.90e-33 129
Msa1461550 MtrunA17_Chr4g0053501 34.419 215 129 3 191 403 260 464 9.83e-33 129
Msa1461550 MtrunA17_Chr3g0092641 32.119 302 175 11 109 403 199 477 4.00e-32 127
Msa1461550 MtrunA17_Chr5g0431441 31.518 257 151 6 141 396 226 458 7.56e-32 126
Msa1461550 MtrunA17_Chr2g0302991 33.101 287 156 11 132 403 197 462 9.83e-32 125
Msa1461550 MtrunA17_Chr5g0420801 29.412 306 183 8 107 406 183 461 1.67e-31 125
Msa1461550 MtrunA17_Chr5g0431361 29.368 269 165 6 138 405 211 455 4.81e-31 123
Msa1461550 MtrunA17_Chr2g0302961 30.241 291 159 8 132 403 200 465 6.60e-31 123
Msa1461550 MtrunA17_Chr5g0432731 27.241 290 177 6 123 406 38 299 8.71e-31 120
Msa1461550 MtrunA17_Chr4g0072761 34.821 224 123 6 180 400 249 452 1.19e-30 122
Msa1461550 MtrunA17_Chr8g0355011 33.333 219 124 4 185 403 165 361 3.58e-30 119
Msa1461550 MtrunA17_Chr3g0118661 32.258 279 154 9 133 402 226 478 4.04e-30 121
Msa1461550 MtrunA17_Chr6g0454371 34.426 183 103 4 221 403 5 170 5.54e-30 114
Msa1461550 MtrunA17_Chr3g0106251 30.502 259 149 7 141 396 56 286 7.48e-30 117
Msa1461550 MtrunA17_Chr7g0218791 28.190 337 201 12 63 397 144 441 1.15e-29 119
Msa1461550 MtrunA17_Chr5g0429681 30.855 269 165 6 136 401 247 497 1.50e-29 120
Msa1461550 MtrunA17_Chr3g0106231 31.660 259 150 8 141 396 210 444 1.88e-29 119
Msa1461550 MtrunA17_Chr7g0232351 41.622 185 82 6 136 307 207 378 3.25e-29 117
Msa1461550 MtrunA17_Chr5g0401721 30.137 219 130 5 191 403 269 470 4.59e-29 118
Msa1461550 MtrunA17_Chr5g0431421 32.463 268 158 7 138 405 206 450 4.61e-29 118
Msa1461550 MtrunA17_Chr4g0072771 34.842 221 124 5 185 405 267 467 3.84e-28 115
Msa1461550 MtrunA17_Chr5g0431401 30.970 268 162 7 138 405 206 450 4.73e-28 115
Msa1461550 MtrunA17_Chr5g0393591 30.374 214 121 4 191 404 251 436 1.38e-27 114
Msa1461550 MtrunA17_Chr6g0454251 34.450 209 124 7 104 308 196 395 1.53e-27 112
Msa1461550 MtrunA17_Chr4g0032331 33.600 250 131 11 136 378 205 426 1.70e-27 113
Msa1461550 MtrunA17_Chr5g0429711 32.103 271 158 11 136 403 214 461 1.84e-27 113
Msa1461550 MtrunA17_Chr4g0042931 31.071 280 163 9 136 405 206 465 3.61e-27 112
Msa1461550 MtrunA17_Chr5g0431371 30.897 301 178 10 109 405 176 450 8.00e-27 111
Msa1461550 MtrunA17_Chr4g0042891 29.856 278 167 7 135 405 211 467 8.46e-27 111
Msa1461550 MtrunA17_Chr8g0337381 41.727 139 69 3 268 406 2 128 1.89e-26 103
Msa1461550 MtrunA17_Chr4g0069611 36.957 184 100 7 197 379 269 437 2.27e-26 110
Msa1461550 MtrunA17_Chr8g0336251 32.510 243 142 8 138 377 216 439 4.16e-26 109
Msa1461550 MtrunA17_Chr3g0118751 30.657 274 141 7 132 403 218 444 4.53e-26 109
Msa1461550 MtrunA17_Chr5g0427571 30.864 243 150 6 138 377 46 273 5.13e-26 107
Msa1461550 MtrunA17_Chr8g0336321 32.510 243 142 8 138 377 216 439 6.53e-26 109
Msa1461550 MtrunA17_Chr3g0092031 36.310 168 90 6 197 362 6 158 4.90e-25 101
Msa1461550 MtrunA17_Chr7g0241781 37.356 174 88 5 185 357 231 384 1.63e-24 104
Msa1461550 MtrunA17_Chr5g0448551 38.028 142 82 3 190 330 255 391 8.40e-24 102
Msa1461550 MtrunA17_Chr7g0241801 31.897 232 106 7 185 415 231 411 1.41e-23 102
Msa1461550 MtrunA17_Chr2g0278741 35.638 188 105 5 173 359 339 511 3.00e-23 102
Msa1461550 MtrunA17_Chr8g0336261 41.071 112 63 2 221 332 5 113 4.60e-23 94.4
Msa1461550 MtrunA17_Chr6g0454231 29.520 271 129 10 136 403 7 218 8.23e-23 100
Msa1461550 MtrunA17_Chr2g0278721 38.562 153 81 4 173 324 257 397 2.94e-22 99.8
Msa1461550 MtrunA17_Chr2g0278721 33.152 184 107 7 197 379 785 953 8.78e-19 89.0
Msa1461550 MtrunA17_Chr2g0302851 32.804 189 119 5 185 371 258 440 1.49e-21 96.3
Msa1461550 MtrunA17_Chr4g0039881 34.078 179 106 6 197 371 246 416 1.52e-21 96.3
Msa1461550 MtrunA17_Chr6g0466831 34.132 167 95 5 197 362 272 424 2.56e-21 95.9
Msa1461550 MtrunA17_Chr6g0466841 34.132 167 95 5 197 362 272 424 2.59e-21 95.9
Msa1461550 MtrunA17_Chr6g0464091 32.836 201 117 7 173 371 262 446 7.73e-21 94.4
Msa1461550 MtrunA17_Chr8g0367221 34.239 184 115 4 197 377 1058 1238 1.15e-20 95.1
Msa1461550 MtrunA17_Chr8g0367221 33.708 178 112 4 197 371 271 445 1.29e-18 88.6
Msa1461550 MtrunA17_Chr8g0367221 30.337 178 118 4 197 371 1548 1722 1.71e-16 82.0
Msa1461550 MtrunA17_Chr1g0207881 23.981 417 265 13 6 404 3 385 2.25e-20 92.4
Msa1461550 MtrunA17_Chr6g0482061 30.534 262 162 10 133 390 221 466 3.04e-20 92.8
Msa1461550 MtrunA17_Chr1g0196851 30.667 225 130 6 191 406 291 498 4.03e-20 92.4
Msa1461550 MtrunA17_Chr5g0431431 23.380 355 192 12 11 325 10 324 1.92e-19 89.4
Msa1461550 MtrunA17_Chr4g0040691 30.556 180 120 3 197 373 261 438 3.17e-18 86.3
Msa1461550 MtrunA17_Chr4g0029131 31.414 191 112 4 197 378 257 437 1.90e-17 84.7
Msa1461550 MtrunA17_Chr4g0029151 33.333 186 115 4 197 378 265 445 2.59e-17 83.6
Msa1461550 MtrunA17_Chr4g0040711 29.143 175 112 3 197 370 261 424 1.33e-16 81.6
Msa1461550 MtrunA17_Chr2g0283041 28.054 221 134 8 191 403 252 455 9.15e-16 79.0
Msa1461550 MtrunA17_Chr7g0231651 38.318 107 58 2 8 109 11 114 1.63e-14 72.4
Msa1461550 MtrunA17_Chr2g0319791 29.381 194 124 5 187 377 249 432 1.99e-14 74.7
Msa1461550 MtrunA17_Chr6g0453941 24.727 275 159 8 1 243 1 259 8.74e-14 71.2
Msa1461550 MtrunA17_Chr7g0250021 34.375 128 66 5 138 259 209 324 1.27e-13 71.6
Msa1461550 MtrunA17_Chr2g0319801 31.667 180 110 5 196 372 258 427 1.39e-13 72.4
Msa1461550 MtrunA17_Chr4g0066231 42.500 80 40 2 306 382 1 77 1.57e-13 65.9
Msa1461550 MtrunA17_Chr6g0453981 30.864 162 103 5 109 266 71 227 2.15e-13 69.3
Msa1461550 MtrunA17_Chr2g0319731 31.111 180 111 5 196 372 275 444 8.44e-13 69.7
Msa1461550 MtrunA17_Chr2g0319751 29.444 180 115 4 191 368 730 899 2.64e-12 68.9
Msa1461550 MtrunA17_Chr6g0454391 38.462 78 35 1 279 356 8 72 6.11e-12 62.4
Msa1461550 MtrunA17_Chr2g0319761 27.513 189 121 5 196 378 258 436 8.54e-12 66.6
Msa1461550 MtrunA17_Chr4g0066251 42.105 76 40 1 1 72 1 76 9.71e-12 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1461550 AT2G15490.3 48.039 306 144 8 106 407 187 481 6.68e-82 259
Msa1461550 AT2G15490.3 36.250 80 44 1 9 81 5 84 5.99e-14 73.9
Msa1461550 AT2G15490.1 47.573 309 144 8 106 407 187 484 3.03e-81 258
Msa1461550 AT2G15490.1 36.250 80 44 1 9 81 5 84 6.25e-14 73.9
Msa1461550 AT4G34131.1 51.079 278 123 7 129 405 216 481 1.28e-80 256
Msa1461550 AT4G34131.1 42.529 87 43 1 3 82 2 88 6.65e-16 79.7
Msa1461550 AT2G36790.1 35.758 495 223 13 5 409 4 493 2.20e-79 254
Msa1461550 AT2G15480.2 48.973 292 135 9 123 407 210 494 3.05e-79 253
Msa1461550 AT2G15480.2 30.928 97 60 1 3 92 2 98 1.38e-13 72.8
Msa1461550 AT2G15480.1 47.552 286 138 7 123 407 210 484 2.80e-78 250
Msa1461550 AT2G15480.1 30.928 97 60 1 3 92 2 98 1.38e-13 72.8
Msa1461550 AT2G36770.1 34.677 496 232 15 2 410 5 495 4.73e-78 250
Msa1461550 AT2G36780.1 45.296 287 149 6 127 410 214 495 2.61e-73 238
Msa1461550 AT2G36780.1 36.607 112 63 2 2 108 5 113 5.26e-17 83.2
Msa1461550 AT2G36800.1 45.105 286 149 6 124 406 210 490 2.27e-72 235
Msa1461550 AT2G36800.1 40.741 81 43 1 7 82 8 88 1.26e-12 69.7
Msa1461550 AT4G34135.1 49.819 277 129 7 129 405 217 483 5.85e-72 234
Msa1461550 AT4G34135.1 34.454 119 68 2 1 109 1 119 9.17e-16 79.3
Msa1461550 AT3G53160.1 32.577 485 235 13 6 403 3 482 1.83e-71 233
Msa1461550 AT2G36760.1 44.056 286 152 6 129 411 216 496 4.70e-70 229
Msa1461550 AT2G36760.1 34.821 112 65 2 2 108 5 113 8.24e-15 76.6
Msa1461550 AT4G34138.1 43.793 290 147 7 123 410 210 485 7.97e-70 228
Msa1461550 AT4G34138.1 34.783 115 61 3 8 109 8 121 2.84e-13 71.6
Msa1461550 AT2G36750.1 41.924 291 161 5 123 410 205 490 3.78e-69 227
Msa1461550 AT2G36750.1 37.143 105 58 2 10 109 9 110 1.06e-13 73.2
Msa1461550 AT3G53150.1 40.956 293 156 7 125 403 220 509 8.62e-61 206
Msa1461550 AT3G53150.1 32.479 117 68 4 1 109 10 123 2.27e-11 65.9
Msa1461550 AT1G06000.1 29.295 454 246 12 3 403 2 433 6.44e-48 169
Msa1461550 AT1G05675.1 38.722 266 141 7 137 400 204 449 7.41e-47 167
Msa1461550 AT1G22380.1 34.539 304 173 9 108 403 195 480 2.37e-46 166
Msa1461550 AT1G22400.1 34.295 312 177 10 108 410 196 488 5.16e-46 166
Msa1461550 AT1G05680.1 29.087 471 226 17 11 400 6 449 1.99e-44 160
Msa1461550 AT3G16520.3 34.643 280 142 7 132 400 207 456 4.75e-44 160
Msa1461550 AT2G31750.1 34.432 273 149 8 138 403 205 454 4.81e-43 157
Msa1461550 AT2G31750.2 34.432 273 149 8 138 403 205 454 9.00e-43 157
Msa1461550 AT2G16890.2 35.517 290 158 9 129 414 214 478 1.06e-42 156
Msa1461550 AT1G22360.1 32.836 335 195 10 78 403 164 477 1.24e-42 156
Msa1461550 AT3G16520.1 37.391 230 116 5 132 350 207 419 2.62e-42 155
Msa1461550 AT3G16520.2 37.391 230 116 5 132 350 207 419 3.06e-42 154
Msa1461550 AT1G01420.1 35.273 275 140 7 136 396 209 459 1.03e-41 154
Msa1461550 AT1G73880.1 34.615 286 161 10 128 410 211 473 1.05e-41 154
Msa1461550 AT1G01420.2 35.273 275 140 7 136 396 212 462 1.07e-41 154
Msa1461550 AT5G14860.1 36.552 290 149 11 125 403 210 475 1.25e-41 154
Msa1461550 AT1G78270.1 31.437 334 196 9 79 403 171 480 1.37e-41 154
Msa1461550 AT1G22360.2 35.849 265 155 7 78 334 164 421 3.13e-41 152
Msa1461550 AT5G26310.1 33.762 311 148 8 125 404 185 468 6.57e-41 151
Msa1461550 AT5G66690.1 32.121 330 163 10 106 404 169 468 1.45e-40 150
Msa1461550 AT4G01070.1 35.088 285 152 6 136 408 209 472 1.49e-40 150
Msa1461550 AT3G21790.1 32.432 296 163 7 126 403 202 478 3.75e-40 150
Msa1461550 AT1G10400.1 37.681 276 139 10 133 403 215 462 1.46e-39 147
Msa1461550 AT1G22370.1 38.725 204 118 5 133 334 51 249 1.67e-39 144
Msa1461550 AT5G12890.1 33.213 277 154 8 136 402 225 480 2.74e-39 147
Msa1461550 AT3G21800.1 31.894 301 171 9 120 403 192 475 2.89e-39 147
Msa1461550 AT4G15260.1 31.164 292 170 5 126 403 80 354 4.26e-39 144
Msa1461550 AT3G50740.1 34.014 294 146 9 136 406 208 476 1.20e-38 145
Msa1461550 AT1G22340.1 32.333 300 181 7 109 403 199 481 1.25e-38 145
Msa1461550 AT1G22370.2 38.725 204 118 5 133 334 221 419 2.99e-38 144
Msa1461550 AT5G03490.1 34.767 279 151 9 128 404 214 463 3.28e-38 144
Msa1461550 AT4G15480.1 33.096 281 163 9 128 403 218 478 3.36e-38 144
Msa1461550 AT5G05870.1 32.986 288 158 8 122 403 196 454 5.47e-38 143
Msa1461550 AT2G31790.1 32.841 271 159 7 138 406 206 455 6.85e-38 143
Msa1461550 AT4G36770.1 34.182 275 128 8 136 389 203 445 1.60e-37 142
Msa1461550 AT2G16890.3 37.391 230 117 7 129 355 214 419 2.29e-37 140
Msa1461550 AT3G21760.1 33.223 301 155 10 126 403 203 480 5.48e-37 141
Msa1461550 AT1G07260.1 33.094 278 151 10 136 403 219 471 5.97e-37 140
Msa1461550 AT2G43840.1 30.675 326 189 12 94 404 144 447 7.64e-37 140
Msa1461550 AT2G43840.2 30.368 326 190 12 94 404 144 447 1.75e-36 139
Msa1461550 AT5G05860.1 31.596 307 170 8 107 403 171 447 1.88e-36 139
Msa1461550 AT2G18570.1 30.496 282 154 8 134 398 205 461 2.33e-36 139
Msa1461550 AT1G07250.1 32.653 294 163 9 119 403 205 472 6.42e-36 138
Msa1461550 AT2G29730.1 33.065 248 142 6 162 407 241 466 6.72e-36 137
Msa1461550 AT2G43820.1 29.664 327 193 11 94 405 144 448 8.06e-36 137
Msa1461550 AT2G36970.1 30.208 288 165 7 128 410 221 477 1.49e-35 137
Msa1461550 AT4G15550.1 31.361 338 190 11 77 402 165 472 2.12e-35 136
Msa1461550 AT1G24100.1 31.835 267 161 6 140 403 210 458 2.33e-35 136
Msa1461550 AT1G51210.1 34.274 248 132 7 134 379 215 433 7.00e-35 134
Msa1461550 AT3G46680.1 32.584 267 153 6 136 401 207 447 7.11e-35 134
Msa1461550 AT1G01390.1 38.991 218 106 6 136 339 209 413 1.68e-34 134
Msa1461550 AT4G15500.1 31.183 279 167 8 133 407 209 466 2.06e-34 134
Msa1461550 AT1G01390.2 38.991 218 106 6 136 339 226 430 2.23e-34 134
Msa1461550 AT2G29740.1 31.849 292 173 10 116 403 205 474 2.36e-34 133
Msa1461550 AT1G07240.1 32.841 271 164 8 136 403 220 475 4.76e-34 132
Msa1461550 AT2G23260.1 31.599 269 164 8 137 403 203 453 6.66e-34 132
Msa1461550 AT5G59590.1 28.857 350 199 11 75 403 129 449 6.96e-34 132
Msa1461550 AT3G46670.1 32.721 272 154 7 137 406 207 451 7.75e-34 131
Msa1461550 AT4G15280.1 30.847 295 168 9 126 403 198 473 1.19e-33 131
Msa1461550 AT4G15280.2 30.847 295 168 9 126 403 230 505 1.19e-33 132
Msa1461550 AT3G11340.1 31.469 286 160 6 127 406 192 447 1.75e-33 130
Msa1461550 AT5G05880.1 30.195 308 179 8 107 406 172 451 1.90e-33 130
Msa1461550 AT4G14090.1 30.827 266 158 6 138 402 214 454 7.40e-33 129
Msa1461550 AT3G46660.1 34.884 215 121 5 194 406 261 458 8.55e-33 129
Msa1461550 AT5G59580.1 31.502 273 158 5 136 406 205 450 9.58e-33 129
Msa1461550 AT2G23250.1 31.481 270 158 10 137 403 190 435 1.31e-32 128
Msa1461550 AT3G21750.1 32.119 302 158 9 126 403 190 468 1.53e-32 128
Msa1461550 AT2G18560.1 31.416 226 135 5 183 398 156 371 2.19e-32 126
Msa1461550 AT4G15490.1 27.607 326 210 7 85 403 160 466 5.15e-32 127
Msa1461550 AT3G46700.1 30.293 307 177 8 107 405 169 446 7.70e-32 126
Msa1461550 AT3G21560.1 28.354 328 210 11 81 403 165 472 7.99e-32 127
Msa1461550 AT2G29750.1 30.796 289 167 10 124 403 209 473 1.14e-31 126
Msa1461550 AT2G28080.1 29.605 304 184 9 106 405 196 473 1.57e-31 125
Msa1461550 AT2G29710.1 34.234 222 129 6 185 403 255 462 1.69e-31 125
Msa1461550 AT3G21780.1 29.795 292 173 9 127 403 194 468 1.20e-30 123
Msa1461550 AT3G55710.1 31.359 287 169 7 127 409 198 460 2.83e-30 122
Msa1461550 AT3G55700.1 30.392 306 179 9 107 406 176 453 3.93e-30 121
Msa1461550 AT5G38010.1 27.273 330 203 8 77 403 158 453 4.63e-30 121
Msa1461550 AT5G05900.1 30.496 282 162 7 122 401 196 445 4.74e-30 121
Msa1461550 AT2G30140.2 28.395 324 181 9 97 400 155 447 7.43e-30 120
Msa1461550 AT2G30150.1 30.942 223 131 4 187 406 237 439 8.38e-30 120
Msa1461550 AT2G30150.2 30.942 223 131 4 187 406 253 455 1.24e-29 120
Msa1461550 AT3G46690.1 30.104 289 170 6 124 405 188 451 1.33e-29 120
Msa1461550 AT3G02100.1 30.970 268 150 8 138 405 229 461 1.76e-29 119
Msa1461550 AT5G05890.1 29.412 306 184 7 107 406 176 455 1.81e-29 119
Msa1461550 AT2G30140.1 29.771 262 149 6 143 400 218 448 6.98e-29 117
Msa1461550 AT2G26480.1 24.026 462 256 12 9 400 6 442 7.24e-29 117
Msa1461550 AT3G46650.1 31.939 263 150 8 136 396 190 425 1.23e-28 117
Msa1461550 AT1G05530.1 28.165 316 189 9 102 403 163 454 4.62e-28 115
Msa1461550 AT1G05560.2 35.160 219 112 7 197 403 301 501 5.24e-28 116
Msa1461550 AT1G05560.1 35.160 219 112 7 197 403 251 451 5.46e-28 115
Msa1461550 AT5G17050.1 33.333 210 120 4 194 403 267 456 5.56e-28 115
Msa1461550 AT5G17030.1 29.151 271 163 8 133 403 214 455 2.22e-27 113
Msa1461550 AT3G46720.1 34.123 211 117 5 195 405 254 442 2.24e-27 113
Msa1461550 AT5G38040.1 32.536 209 125 4 195 403 257 449 2.35e-27 113
Msa1461550 AT5G17040.2 27.576 330 205 9 77 403 39 337 7.48e-26 107
Msa1461550 AT4G34135.2 50.000 114 54 3 129 242 217 327 7.62e-26 107
Msa1461550 AT4G34135.2 34.454 119 68 2 1 109 1 119 4.14e-16 79.3
Msa1461550 AT5G17040.1 30.622 209 125 4 195 403 251 439 1.97e-25 107
Msa1461550 AT1G30530.1 29.670 273 157 8 133 403 211 450 2.26e-25 107
Msa1461550 AT5G65550.1 31.174 247 148 7 138 380 221 449 1.32e-24 105
Msa1461550 AT3G22250.1 37.762 143 82 4 190 330 269 406 4.79e-23 101
Msa1461550 AT5G49690.1 34.259 216 114 6 197 411 267 455 5.38e-22 98.2
Msa1461550 AT3G29630.2 25.397 441 269 16 8 410 3 421 1.25e-20 93.6
Msa1461550 AT3G29630.1 24.034 466 270 16 8 410 3 447 1.26e-19 90.9
Msa1461550 AT5G53990.1 25.806 434 230 16 10 365 5 424 2.77e-19 90.1
Msa1461550 AT5G37950.1 38.938 113 67 2 195 307 233 343 7.31e-19 87.8
Msa1461550 AT5G37950.2 38.938 113 67 2 195 307 227 337 7.54e-19 87.8
Msa1461550 AT4G27570.1 34.375 160 99 4 191 349 244 398 3.05e-18 87.0
Msa1461550 AT1G64910.1 31.633 196 119 5 185 371 230 419 3.08e-18 86.7
Msa1461550 AT4G27560.1 34.194 155 96 4 195 348 248 397 1.08e-17 85.1
Msa1461550 AT2G22590.1 30.102 196 115 6 197 384 274 455 9.23e-17 82.4
Msa1461550 AT5G54010.1 32.298 161 106 2 191 350 244 402 3.49e-16 80.5
Msa1461550 AT1G50580.1 25.628 398 221 16 8 342 3 388 3.61e-16 80.5
Msa1461550 AT4G09500.1 23.844 411 234 14 9 371 4 383 4.53e-16 80.1
Msa1461550 AT2G22930.1 32.075 159 102 4 191 348 238 391 1.91e-15 78.2
Msa1461550 AT2G15490.2 36.250 80 44 1 9 81 5 84 1.69e-14 73.6
Msa1461550 AT4G09500.2 28.814 177 114 4 196 371 243 408 8.55e-14 73.2
Msa1461550 AT5G54060.1 32.308 130 80 4 197 322 268 393 3.33e-13 71.6
Msa1461550 AT1G64920.1 32.000 150 89 5 196 337 243 387 7.81e-13 70.5

Find 94 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTACATGAAGTTGGTTAT+TGG 0.174929 tig0041587:-608 None:intergenic
CTTCTCCGCGCGTCCCCTAT+TGG 0.277889 tig0041587:-1379 None:intergenic
AAGAGACAGAATTGCTAAAT+TGG 0.283406 tig0041587:+1412 Msa1461550:CDS
CTATCAAAACTCAGCTTATT+CGG 0.294911 tig0041587:+785 Msa1461550:CDS
GTCACAATTCCTCCTGTTGC+AGG 0.300727 tig0041587:-1687 None:intergenic
TGAATTGAAGTCACTGTCTA+TGG 0.302994 tig0041587:-755 None:intergenic
AGTCACTGTCTATGGATTCT+TGG 0.318753 tig0041587:-747 None:intergenic
GTGTAGAGGCAATGGTTAGA+AGG 0.318963 tig0041587:+1874 Msa1461550:CDS
TGCTTTCTCACCAAGTGCTT+TGG 0.319430 tig0041587:-2069 None:intergenic
GGCACCACAGCTTCTCATAT+TGG 0.329742 tig0041587:+1659 Msa1461550:CDS
CAATGATGATAAAGGAAGTT+AGG 0.355511 tig0041587:+2254 Msa1461550:three_prime_UTR
GAATCGGAGGCAAGAAGTTA+TGG 0.370851 tig0041587:+1228 Msa1461550:CDS
TCTTGAAACATTACCTCAAT+AGG 0.379330 tig0041587:-925 None:intergenic
ATATGGCCAGGAGTTGGATA+TGG 0.394728 tig0041587:-637 None:intergenic
AAACTTAGTAAAACTACAAT+GGG 0.395728 tig0041587:+1294 Msa1461550:CDS
TTGTTAGCCCAAGTTGAAAC+TGG 0.399477 tig0041587:-1339 None:intergenic
AATCGGAGGCAAGAAGTTAT+GGG 0.408679 tig0041587:+1229 Msa1461550:CDS
ACCTTCCTCTATAGTCCTCT+TGG 0.417533 tig0041587:-1988 None:intergenic
TGATGAAAGAAAGGCCAATA+GGG 0.419275 tig0041587:+1365 Msa1461550:CDS
TAGTCTTGCTGTGTCTATCA+TGG 0.421529 tig0041587:-665 None:intergenic
TGTAGAGGCAATGGTTAGAA+GGG 0.423503 tig0041587:+1875 Msa1461550:CDS
TTGCAGTGCACATGAATGAT+TGG 0.427635 tig0041587:-2234 None:intergenic
GCCGTCTGCAGCTTCGTGAT+TGG 0.438885 tig0041587:+1160 Msa1461550:intron
CCTCTCATTGTAAAATTGTT+CGG 0.443668 tig0041587:-1781 None:intergenic
ATGATGAAAGAAAGGCCAAT+AGG 0.443988 tig0041587:+1364 Msa1461550:CDS
AACATTGGCCATGTGATCAT+TGG 0.446631 tig0041587:-1756 None:intergenic
GCTGGTGAAGGCATTAGATA+TGG 0.447445 tig0041587:+2141 Msa1461550:three_prime_UTR
TCTGTGTTGTATGTAAGTTT+TGG 0.456370 tig0041587:+1456 Msa1461550:CDS
TGTAATCTTGCTGCATTAAG+AGG 0.458335 tig0041587:+2114 Msa1461550:three_prime_UTR
ATATTGGATCACCCTGCAAC+AGG 0.459289 tig0041587:+1675 Msa1461550:CDS
CCGTCTGCAGCTTCGTGATT+GGG 0.460861 tig0041587:+1161 Msa1461550:intron
GAGCAAAAGAAAACAAGTTA+TGG 0.463105 tig0041587:+1841 Msa1461550:CDS
GCAACAAGGGCTATATCATA+TGG 0.464949 tig0041587:+1631 Msa1461550:CDS
GGAAGACCAACTTGAGATGA+AGG 0.474191 tig0041587:-811 None:intergenic
GTGCACTGCAATGATGATAA+AGG 0.475890 tig0041587:+2246 Msa1461550:three_prime_UTR
TTTCTTCCATATCCAACTCC+TGG 0.485549 tig0041587:+631 Msa1461550:CDS
AATGTCAAAGATGTTAAAGC+TGG 0.486509 tig0041587:+847 Msa1461550:CDS
CTACAATGGGGATTAAGTCT+TGG 0.492058 tig0041587:+1307 Msa1461550:CDS
AGGGCTATATCATATGGAGT+TGG 0.492900 tig0041587:+1637 Msa1461550:CDS
CGGTTCCCTTCATCTCAAGT+TGG 0.494886 tig0041587:+805 Msa1461550:CDS
TCTCAAGTTGGTCTTCCTGA+TGG 0.496816 tig0041587:+817 Msa1461550:CDS
TTCTTGGAATGTTGAAGCAT+TGG 0.498557 tig0041587:-731 None:intergenic
GTGTAGGACCAGTTTCAACT+TGG 0.507116 tig0041587:+1331 Msa1461550:CDS
GGGCTATATCATATGGAGTT+GGG 0.507570 tig0041587:+1638 Msa1461550:CDS
TAAAATTGTTCGGCAAACAT+TGG 0.511767 tig0041587:-1771 None:intergenic
TAACAAGGATGATGAAAGAA+AGG 0.517122 tig0041587:+1356 Msa1461550:CDS
TGTCTATCATGGGAATCATA+TGG 0.520374 tig0041587:-654 None:intergenic
GCACATGGGCTTGAAAAGTC+AGG 0.529658 tig0041587:+1519 Msa1461550:CDS
ATCATGGGAATCATATGGCC+AGG 0.531708 tig0041587:-649 None:intergenic
AGTTTCAACTTGGGCTAACA+AGG 0.533844 tig0041587:+1341 Msa1461550:CDS
GATAGAGACGAGGGCGAGGA+AGG 0.536941 tig0041587:+1573 Msa1461550:CDS
GGAATCATATGGCCAGGAGT+TGG 0.537267 tig0041587:-643 None:intergenic
GGGATTAAGTCTTGGAGTGT+AGG 0.538225 tig0041587:+1315 Msa1461550:CDS
TAGCTTTAGTGTAGAGGCAA+TGG 0.542158 tig0041587:+1866 Msa1461550:CDS
TGGACACTCTTACAACAACT+TGG 0.544408 tig0041587:+2010 Msa1461550:CDS
GCTGCATTAAGAGGTGTAGC+TGG 0.552943 tig0041587:+2123 Msa1461550:three_prime_UTR
AGTCTTGCTGTGTCTATCAT+GGG 0.552969 tig0041587:-664 None:intergenic
CAGCTTGTAGAAATTGCACA+TGG 0.554057 tig0041587:+1504 Msa1461550:CDS
AAATGATAGAGACGAGGGCG+AGG 0.561093 tig0041587:+1569 Msa1461550:CDS
GTCAAGACATCAAAGAAATG+AGG 0.561638 tig0041587:+1937 Msa1461550:CDS
ATGCTTGGTAAAATCAGTCA+TGG 0.566239 tig0041587:+883 Msa1461550:CDS
TGCTGCCAAGAGGACTATAG+AGG 0.566921 tig0041587:+1983 Msa1461550:CDS
ATGGAATAGCTTTAGTGTAG+AGG 0.569279 tig0041587:+1860 Msa1461550:CDS
GGAACATCCTCAGAAATGCT+TGG 0.571059 tig0041587:+868 Msa1461550:CDS
ACACTTGAAAGCATTAGTGT+TGG 0.572192 tig0041587:+1729 Msa1461550:CDS
TTGAAGAAATCCAAAGCACT+TGG 0.578175 tig0041587:+2059 Msa1461550:CDS
TTAAGAGGTGTAGCTGGTGA+AGG 0.578366 tig0041587:+2129 Msa1461550:three_prime_UTR
AATTGGTTCAAAATAGGCTG+TGG 0.581638 tig0041587:-1202 None:intergenic
GAAACTTAGTAAAACTACAA+TGG 0.585447 tig0041587:+1293 Msa1461550:CDS
GGAAGAGATTGCAAAGGCTG+CGG 0.587032 tig0041587:+1896 Msa1461550:CDS
GAATTGTGACTCACTGTGGT+TGG 0.590945 tig0041587:+1700 Msa1461550:CDS
TGTAGGACCAGTTTCAACTT+GGG 0.595432 tig0041587:+1332 Msa1461550:CDS
ATTGGCATGTGTAGTGATGA+TGG 0.600742 tig0041587:-713 None:intergenic
TCACAATTCCTCCTGTTGCA+GGG 0.601728 tig0041587:-1686 None:intergenic
GCAAGACTATTTGCAAAGCA+TGG 0.602004 tig0041587:+679 Msa1461550:CDS
AAAGGCCAATAGGGGACGCG+CGG 0.611594 tig0041587:+1374 Msa1461550:CDS
GCCAAGAGGACTATAGAGGA+AGG 0.631460 tig0041587:+1987 Msa1461550:CDS
GATGAAAGAAAGGCCAATAG+GGG 0.637565 tig0041587:+1366 Msa1461550:CDS
AATGCTCAGAGATCCTATTG+AGG 0.638118 tig0041587:+912 Msa1461550:CDS
TTGGATCACCCTGCAACAGG+AGG 0.642610 tig0041587:+1678 Msa1461550:CDS
GGACGCGCGGAGAAGAACGT+TGG 0.648211 tig0041587:+1387 Msa1461550:CDS
AAGAGGACTATAGAGGAAGG+TGG 0.653780 tig0041587:+1990 Msa1461550:CDS
GAAGACCAACTTGAGATGAA+GGG 0.656818 tig0041587:-810 None:intergenic
TTGAAGATAGGGGTCCCAGT+GGG 0.668558 tig0041587:+1819 Msa1461550:CDS
AGGGTGAAAGAAAGCAACAA+GGG 0.669321 tig0041587:+1618 Msa1461550:CDS
AGCTTGTAGAAATTGCACAT+GGG 0.669891 tig0041587:+1505 Msa1461550:CDS
TTGGTTTGCCAATGATCACA+TGG 0.673606 tig0041587:+1748 Msa1461550:CDS
TGATCCAATATGAGAAGCTG+TGG 0.684928 tig0041587:-1663 None:intergenic
TAGAAGGGAAGAGATTGCAA+AGG 0.689092 tig0041587:+1890 Msa1461550:CDS
AAGGGTGAAAGAAAGCAACA+AGG 0.690910 tig0041587:+1617 Msa1461550:CDS
AGTTTGGCGATGCTGCCAAG+AGG 0.699462 tig0041587:+1973 Msa1461550:CDS
TTTGAAGATAGGGGTCCCAG+TGG 0.714466 tig0041587:+1818 Msa1461550:CDS
GGAGGAATTGTGACTCACTG+TGG 0.763931 tig0041587:+1696 Msa1461550:CDS
AACTTAGTAAAACTACAATG+GGG 0.781934 tig0041587:+1295 Msa1461550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCAAAAATTGGTTCAAAAT+AGG - tig0041587:1211-1230 None:intergenic 20.0%
!!! TTTTGAACCAATTTTTGAAT+CGG + tig0041587:1212-1231 Msa1461550:CDS 20.0%
!! AAACTTAGTAAAACTACAAT+GGG + tig0041587:1294-1313 Msa1461550:CDS 20.0%
!!! TTCAAAAATTGGTTCAAAAT+AGG - tig0041587:1211-1230 None:intergenic 20.0%
!!! TTTTGAACCAATTTTTGAAT+CGG + tig0041587:1212-1231 Msa1461550:CDS 20.0%
!! AAACTTAGTAAAACTACAAT+GGG + tig0041587:1294-1313 Msa1461550:CDS 20.0%
! ATATCAGAAACTATACAATC+TGG - tig0041587:958-977 None:intergenic 25.0%
! AACAAAATAACATGCACAAT+TGG - tig0041587:1058-1077 None:intergenic 25.0%
! GAAACTTAGTAAAACTACAA+TGG + tig0041587:1293-1312 Msa1461550:CDS 25.0%
! AACTTAGTAAAACTACAATG+GGG + tig0041587:1295-1314 Msa1461550:CDS 25.0%
!! ATAATTTTATCTGGGTTGTA+AGG + tig0041587:1544-1563 Msa1461550:CDS 25.0%
!!! TTGTTGATGTTTTGAAGATA+GGG + tig0041587:1808-1827 Msa1461550:CDS 25.0%
! ATATCAGAAACTATACAATC+TGG - tig0041587:958-977 None:intergenic 25.0%
! AACAAAATAACATGCACAAT+TGG - tig0041587:1058-1077 None:intergenic 25.0%
! GAAACTTAGTAAAACTACAA+TGG + tig0041587:1293-1312 Msa1461550:CDS 25.0%
! AACTTAGTAAAACTACAATG+GGG + tig0041587:1295-1314 Msa1461550:CDS 25.0%
!! ATAATTTTATCTGGGTTGTA+AGG + tig0041587:1544-1563 Msa1461550:CDS 25.0%
!!! TTGTTGATGTTTTGAAGATA+GGG + tig0041587:1808-1827 Msa1461550:CDS 25.0%
! AACTACATGAAGTTGGTTAT+TGG - tig0041587:611-630 None:intergenic 30.0%
GAAGAAAAACTACATGAAGT+TGG - tig0041587:618-637 None:intergenic 30.0%
CTATCAAAACTCAGCTTATT+CGG + tig0041587:785-804 Msa1461550:CDS 30.0%
! TTGACATTTTCAATTCCATC+AGG - tig0041587:835-854 None:intergenic 30.0%
AATGTCAAAGATGTTAAAGC+TGG + tig0041587:847-866 Msa1461550:CDS 30.0%
TCTTGAAACATTACCTCAAT+AGG - tig0041587:928-947 None:intergenic 30.0%
TTTCTGATATGATGATTCCT+TGG + tig0041587:968-987 Msa1461550:intron 30.0%
TCAGAAACTAAATGATCATG+AGG - tig0041587:1093-1112 None:intergenic 30.0%
TAACAAGGATGATGAAAGAA+AGG + tig0041587:1356-1375 Msa1461550:CDS 30.0%
AAGAGACAGAATTGCTAAAT+TGG + tig0041587:1412-1431 Msa1461550:CDS 30.0%
! TCTGTGTTGTATGTAAGTTT+TGG + tig0041587:1456-1475 Msa1461550:CDS 30.0%
! AGTCAGGTCATAATTTTATC+TGG + tig0041587:1535-1554 Msa1461550:CDS 30.0%
! GTCAGGTCATAATTTTATCT+GGG + tig0041587:1536-1555 Msa1461550:CDS 30.0%
TAAAATTGTTCGGCAAACAT+TGG - tig0041587:1774-1793 None:intergenic 30.0%
CCTCTCATTGTAAAATTGTT+CGG - tig0041587:1784-1803 None:intergenic 30.0%
!!! CTTGTTGATGTTTTGAAGAT+AGG + tig0041587:1807-1826 Msa1461550:CDS 30.0%
!!! TGTTGATGTTTTGAAGATAG+GGG + tig0041587:1809-1828 Msa1461550:CDS 30.0%
GAGCAAAAGAAAACAAGTTA+TGG + tig0041587:1841-1860 Msa1461550:CDS 30.0%
!! AATATCCAACTTTTTCTCTC+CGG + tig0041587:2170-2189 Msa1461550:three_prime_UTR 30.0%
CAATGATGATAAAGGAAGTT+AGG + tig0041587:2254-2273 Msa1461550:three_prime_UTR 30.0%
! AACTACATGAAGTTGGTTAT+TGG - tig0041587:611-630 None:intergenic 30.0%
GAAGAAAAACTACATGAAGT+TGG - tig0041587:618-637 None:intergenic 30.0%
CTATCAAAACTCAGCTTATT+CGG + tig0041587:785-804 Msa1461550:CDS 30.0%
! TTGACATTTTCAATTCCATC+AGG - tig0041587:835-854 None:intergenic 30.0%
AATGTCAAAGATGTTAAAGC+TGG + tig0041587:847-866 Msa1461550:CDS 30.0%
TCTTGAAACATTACCTCAAT+AGG - tig0041587:928-947 None:intergenic 30.0%
TTTCTGATATGATGATTCCT+TGG + tig0041587:968-987 Msa1461550:intron 30.0%
TCAGAAACTAAATGATCATG+AGG - tig0041587:1093-1112 None:intergenic 30.0%
TAACAAGGATGATGAAAGAA+AGG + tig0041587:1356-1375 Msa1461550:CDS 30.0%
AAGAGACAGAATTGCTAAAT+TGG + tig0041587:1412-1431 Msa1461550:CDS 30.0%
! TCTGTGTTGTATGTAAGTTT+TGG + tig0041587:1456-1475 Msa1461550:CDS 30.0%
! AGTCAGGTCATAATTTTATC+TGG + tig0041587:1535-1554 Msa1461550:CDS 30.0%
! GTCAGGTCATAATTTTATCT+GGG + tig0041587:1536-1555 Msa1461550:CDS 30.0%
TAAAATTGTTCGGCAAACAT+TGG - tig0041587:1774-1793 None:intergenic 30.0%
CCTCTCATTGTAAAATTGTT+CGG - tig0041587:1784-1803 None:intergenic 30.0%
!!! CTTGTTGATGTTTTGAAGAT+AGG + tig0041587:1807-1826 Msa1461550:CDS 30.0%
!!! TGTTGATGTTTTGAAGATAG+GGG + tig0041587:1809-1828 Msa1461550:CDS 30.0%
GAGCAAAAGAAAACAAGTTA+TGG + tig0041587:1841-1860 Msa1461550:CDS 30.0%
!! AATATCCAACTTTTTCTCTC+CGG + tig0041587:2170-2189 Msa1461550:three_prime_UTR 30.0%
CAATGATGATAAAGGAAGTT+AGG + tig0041587:2254-2273 Msa1461550:three_prime_UTR 30.0%
TGTCTATCATGGGAATCATA+TGG - tig0041587:657-676 None:intergenic 35.0%
TTCTTGGAATGTTGAAGCAT+TGG - tig0041587:734-753 None:intergenic 35.0%
TGAATTGAAGTCACTGTCTA+TGG - tig0041587:758-777 None:intergenic 35.0%
ATAGACAGTGACTTCAATTC+AGG + tig0041587:757-776 Msa1461550:intron 35.0%
! GATTTTACCAAGCATTTCTG+AGG - tig0041587:878-897 None:intergenic 35.0%
ATGCTTGGTAAAATCAGTCA+TGG + tig0041587:883-902 Msa1461550:CDS 35.0%
! AATTGGTTCAAAATAGGCTG+TGG - tig0041587:1205-1224 None:intergenic 35.0%
! TGAACCAATTTTTGAATCGG+AGG + tig0041587:1215-1234 Msa1461550:CDS 35.0%
ATGATGAAAGAAAGGCCAAT+AGG + tig0041587:1364-1383 Msa1461550:CDS 35.0%
TGATGAAAGAAAGGCCAATA+GGG + tig0041587:1365-1384 Msa1461550:CDS 35.0%
GAGCATGAAAAAGCTTAGTA+AGG - tig0041587:1485-1504 None:intergenic 35.0%
AGCTTGTAGAAATTGCACAT+GGG + tig0041587:1505-1524 Msa1461550:CDS 35.0%
AAGGAAAAATGATAGAGACG+AGG + tig0041587:1563-1582 Msa1461550:CDS 35.0%
AGGAAAAATGATAGAGACGA+GGG + tig0041587:1564-1583 Msa1461550:CDS 35.0%
! AGGTTTTCTGCAAGATTTTG+AGG + tig0041587:1593-1612 Msa1461550:CDS 35.0%
!! TTCTGCAAGATTTTGAGGAA+AGG + tig0041587:1598-1617 Msa1461550:CDS 35.0%
!! TCTGCAAGATTTTGAGGAAA+GGG + tig0041587:1599-1618 Msa1461550:CDS 35.0%
!! ACACTTGAAAGCATTAGTGT+TGG + tig0041587:1729-1748 Msa1461550:CDS 35.0%
! CCGAACAATTTTACAATGAG+AGG + tig0041587:1781-1800 Msa1461550:CDS 35.0%
!! ATGGAATAGCTTTAGTGTAG+AGG + tig0041587:1860-1879 Msa1461550:CDS 35.0%
GTCAAGACATCAAAGAAATG+AGG + tig0041587:1937-1956 Msa1461550:CDS 35.0%
AGGATGAGAGCAAAAAAGTT+TGG + tig0041587:1957-1976 Msa1461550:CDS 35.0%
! TTGAAGAAATCCAAAGCACT+TGG + tig0041587:2059-2078 Msa1461550:CDS 35.0%
TGTAATCTTGCTGCATTAAG+AGG + tig0041587:2114-2133 Msa1461550:three_prime_UTR 35.0%
CAAATCACAGCAAAAATAGC+CGG - tig0041587:2192-2211 None:intergenic 35.0%
TGTCTATCATGGGAATCATA+TGG - tig0041587:657-676 None:intergenic 35.0%
TTCTTGGAATGTTGAAGCAT+TGG - tig0041587:734-753 None:intergenic 35.0%
TGAATTGAAGTCACTGTCTA+TGG - tig0041587:758-777 None:intergenic 35.0%
ATAGACAGTGACTTCAATTC+AGG + tig0041587:757-776 Msa1461550:intron 35.0%
! GATTTTACCAAGCATTTCTG+AGG - tig0041587:878-897 None:intergenic 35.0%
ATGCTTGGTAAAATCAGTCA+TGG + tig0041587:883-902 Msa1461550:CDS 35.0%
! AATTGGTTCAAAATAGGCTG+TGG - tig0041587:1205-1224 None:intergenic 35.0%
! TGAACCAATTTTTGAATCGG+AGG + tig0041587:1215-1234 Msa1461550:CDS 35.0%
ATGATGAAAGAAAGGCCAAT+AGG + tig0041587:1364-1383 Msa1461550:CDS 35.0%
TGATGAAAGAAAGGCCAATA+GGG + tig0041587:1365-1384 Msa1461550:CDS 35.0%
GAGCATGAAAAAGCTTAGTA+AGG - tig0041587:1485-1504 None:intergenic 35.0%
AGCTTGTAGAAATTGCACAT+GGG + tig0041587:1505-1524 Msa1461550:CDS 35.0%
AAGGAAAAATGATAGAGACG+AGG + tig0041587:1563-1582 Msa1461550:CDS 35.0%
AGGAAAAATGATAGAGACGA+GGG + tig0041587:1564-1583 Msa1461550:CDS 35.0%
! AGGTTTTCTGCAAGATTTTG+AGG + tig0041587:1593-1612 Msa1461550:CDS 35.0%
!! TTCTGCAAGATTTTGAGGAA+AGG + tig0041587:1598-1617 Msa1461550:CDS 35.0%
!! TCTGCAAGATTTTGAGGAAA+GGG + tig0041587:1599-1618 Msa1461550:CDS 35.0%
!! ACACTTGAAAGCATTAGTGT+TGG + tig0041587:1729-1748 Msa1461550:CDS 35.0%
! CCGAACAATTTTACAATGAG+AGG + tig0041587:1781-1800 Msa1461550:CDS 35.0%
!! ATGGAATAGCTTTAGTGTAG+AGG + tig0041587:1860-1879 Msa1461550:CDS 35.0%
GTCAAGACATCAAAGAAATG+AGG + tig0041587:1937-1956 Msa1461550:CDS 35.0%
AGGATGAGAGCAAAAAAGTT+TGG + tig0041587:1957-1976 Msa1461550:CDS 35.0%
! TTGAAGAAATCCAAAGCACT+TGG + tig0041587:2059-2078 Msa1461550:CDS 35.0%
TGTAATCTTGCTGCATTAAG+AGG + tig0041587:2114-2133 Msa1461550:three_prime_UTR 35.0%
CAAATCACAGCAAAAATAGC+CGG - tig0041587:2192-2211 None:intergenic 35.0%
TTTCTTCCATATCCAACTCC+TGG + tig0041587:631-650 Msa1461550:CDS 40.0%
! AGTCTTGCTGTGTCTATCAT+GGG - tig0041587:667-686 None:intergenic 40.0%
! TAGTCTTGCTGTGTCTATCA+TGG - tig0041587:668-687 None:intergenic 40.0%
GCAAGACTATTTGCAAAGCA+TGG + tig0041587:679-698 Msa1461550:CDS 40.0%
ATTGGCATGTGTAGTGATGA+TGG - tig0041587:716-735 None:intergenic 40.0%
AGTCACTGTCTATGGATTCT+TGG - tig0041587:750-769 None:intergenic 40.0%
GAAGACCAACTTGAGATGAA+GGG - tig0041587:813-832 None:intergenic 40.0%
AATGCTCAGAGATCCTATTG+AGG + tig0041587:912-931 Msa1461550:CDS 40.0%
TATGATGATTCCTTGGACTG+TGG + tig0041587:975-994 Msa1461550:intron 40.0%
CTGCAAAACTAAGCATTCCT+AGG + tig0041587:1004-1023 Msa1461550:intron 40.0%
GAGCTGTAATAGTAAAGCCT+AGG - tig0041587:1024-1043 None:intergenic 40.0%
TCAATGGTATGAGGCAAACA+AGG - tig0041587:1135-1154 None:intergenic 40.0%
CTTGCCTCCGATTCAAAAAT+TGG - tig0041587:1222-1241 None:intergenic 40.0%
AATCGGAGGCAAGAAGTTAT+GGG + tig0041587:1229-1248 Msa1461550:CDS 40.0%
CTACAATGGGGATTAAGTCT+TGG + tig0041587:1307-1326 Msa1461550:CDS 40.0%
TGTAGGACCAGTTTCAACTT+GGG + tig0041587:1332-1351 Msa1461550:CDS 40.0%
! TTGTTAGCCCAAGTTGAAAC+TGG - tig0041587:1342-1361 None:intergenic 40.0%
AGTTTCAACTTGGGCTAACA+AGG + tig0041587:1341-1360 Msa1461550:CDS 40.0%
GATGAAAGAAAGGCCAATAG+GGG + tig0041587:1366-1385 Msa1461550:CDS 40.0%
CAGCTTGTAGAAATTGCACA+TGG + tig0041587:1504-1523 Msa1461550:CDS 40.0%
AAGGGTGAAAGAAAGCAACA+AGG + tig0041587:1617-1636 Msa1461550:CDS 40.0%
AGGGTGAAAGAAAGCAACAA+GGG + tig0041587:1618-1637 Msa1461550:CDS 40.0%
GCAACAAGGGCTATATCATA+TGG + tig0041587:1631-1650 Msa1461550:CDS 40.0%
AGGGCTATATCATATGGAGT+TGG + tig0041587:1637-1656 Msa1461550:CDS 40.0%
GGGCTATATCATATGGAGTT+GGG + tig0041587:1638-1657 Msa1461550:CDS 40.0%
TGATCCAATATGAGAAGCTG+TGG - tig0041587:1666-1685 None:intergenic 40.0%
!! TTGGTTTGCCAATGATCACA+TGG + tig0041587:1748-1767 Msa1461550:CDS 40.0%
AACATTGGCCATGTGATCAT+TGG - tig0041587:1759-1778 None:intergenic 40.0%
! TGTTTTCTTTTGCTCCCACT+GGG - tig0041587:1836-1855 None:intergenic 40.0%
! TTGTTTTCTTTTGCTCCCAC+TGG - tig0041587:1837-1856 None:intergenic 40.0%
!! TAGCTTTAGTGTAGAGGCAA+TGG + tig0041587:1866-1885 Msa1461550:CDS 40.0%
TGTAGAGGCAATGGTTAGAA+GGG + tig0041587:1875-1894 Msa1461550:CDS 40.0%
TAGAAGGGAAGAGATTGCAA+AGG + tig0041587:1890-1909 Msa1461550:CDS 40.0%
TGGACACTCTTACAACAACT+TGG + tig0041587:2010-2029 Msa1461550:CDS 40.0%
AATAGCCGGAGAGAAAAAGT+TGG - tig0041587:2178-2197 None:intergenic 40.0%
!!! CGGCTATTTTTGCTGTGATT+TGG + tig0041587:2190-2209 Msa1461550:three_prime_UTR 40.0%
TTGCAGTGCACATGAATGAT+TGG - tig0041587:2237-2256 None:intergenic 40.0%
GTGCACTGCAATGATGATAA+AGG + tig0041587:2246-2265 Msa1461550:three_prime_UTR 40.0%
TTTCTTCCATATCCAACTCC+TGG + tig0041587:631-650 Msa1461550:CDS 40.0%
! AGTCTTGCTGTGTCTATCAT+GGG - tig0041587:667-686 None:intergenic 40.0%
! TAGTCTTGCTGTGTCTATCA+TGG - tig0041587:668-687 None:intergenic 40.0%
GCAAGACTATTTGCAAAGCA+TGG + tig0041587:679-698 Msa1461550:CDS 40.0%
ATTGGCATGTGTAGTGATGA+TGG - tig0041587:716-735 None:intergenic 40.0%
AGTCACTGTCTATGGATTCT+TGG - tig0041587:750-769 None:intergenic 40.0%
GAAGACCAACTTGAGATGAA+GGG - tig0041587:813-832 None:intergenic 40.0%
AATGCTCAGAGATCCTATTG+AGG + tig0041587:912-931 Msa1461550:CDS 40.0%
TATGATGATTCCTTGGACTG+TGG + tig0041587:975-994 Msa1461550:intron 40.0%
CTGCAAAACTAAGCATTCCT+AGG + tig0041587:1004-1023 Msa1461550:intron 40.0%
GAGCTGTAATAGTAAAGCCT+AGG - tig0041587:1024-1043 None:intergenic 40.0%
TCAATGGTATGAGGCAAACA+AGG - tig0041587:1135-1154 None:intergenic 40.0%
CTTGCCTCCGATTCAAAAAT+TGG - tig0041587:1222-1241 None:intergenic 40.0%
AATCGGAGGCAAGAAGTTAT+GGG + tig0041587:1229-1248 Msa1461550:CDS 40.0%
CTACAATGGGGATTAAGTCT+TGG + tig0041587:1307-1326 Msa1461550:CDS 40.0%
TGTAGGACCAGTTTCAACTT+GGG + tig0041587:1332-1351 Msa1461550:CDS 40.0%
! TTGTTAGCCCAAGTTGAAAC+TGG - tig0041587:1342-1361 None:intergenic 40.0%
AGTTTCAACTTGGGCTAACA+AGG + tig0041587:1341-1360 Msa1461550:CDS 40.0%
GATGAAAGAAAGGCCAATAG+GGG + tig0041587:1366-1385 Msa1461550:CDS 40.0%
CAGCTTGTAGAAATTGCACA+TGG + tig0041587:1504-1523 Msa1461550:CDS 40.0%
AAGGGTGAAAGAAAGCAACA+AGG + tig0041587:1617-1636 Msa1461550:CDS 40.0%
AGGGTGAAAGAAAGCAACAA+GGG + tig0041587:1618-1637 Msa1461550:CDS 40.0%
GCAACAAGGGCTATATCATA+TGG + tig0041587:1631-1650 Msa1461550:CDS 40.0%
AGGGCTATATCATATGGAGT+TGG + tig0041587:1637-1656 Msa1461550:CDS 40.0%
GGGCTATATCATATGGAGTT+GGG + tig0041587:1638-1657 Msa1461550:CDS 40.0%
TGATCCAATATGAGAAGCTG+TGG - tig0041587:1666-1685 None:intergenic 40.0%
!! TTGGTTTGCCAATGATCACA+TGG + tig0041587:1748-1767 Msa1461550:CDS 40.0%
AACATTGGCCATGTGATCAT+TGG - tig0041587:1759-1778 None:intergenic 40.0%
! TGTTTTCTTTTGCTCCCACT+GGG - tig0041587:1836-1855 None:intergenic 40.0%
! TTGTTTTCTTTTGCTCCCAC+TGG - tig0041587:1837-1856 None:intergenic 40.0%
!! TAGCTTTAGTGTAGAGGCAA+TGG + tig0041587:1866-1885 Msa1461550:CDS 40.0%
TGTAGAGGCAATGGTTAGAA+GGG + tig0041587:1875-1894 Msa1461550:CDS 40.0%
TAGAAGGGAAGAGATTGCAA+AGG + tig0041587:1890-1909 Msa1461550:CDS 40.0%
TGGACACTCTTACAACAACT+TGG + tig0041587:2010-2029 Msa1461550:CDS 40.0%
AATAGCCGGAGAGAAAAAGT+TGG - tig0041587:2178-2197 None:intergenic 40.0%
!!! CGGCTATTTTTGCTGTGATT+TGG + tig0041587:2190-2209 Msa1461550:three_prime_UTR 40.0%
TTGCAGTGCACATGAATGAT+TGG - tig0041587:2237-2256 None:intergenic 40.0%
GTGCACTGCAATGATGATAA+AGG + tig0041587:2246-2265 Msa1461550:three_prime_UTR 40.0%
ATATGGCCAGGAGTTGGATA+TGG - tig0041587:640-659 None:intergenic 45.0%
ATCATGGGAATCATATGGCC+AGG - tig0041587:652-671 None:intergenic 45.0%
GGAAGACCAACTTGAGATGA+AGG - tig0041587:814-833 None:intergenic 45.0%
!! TCTCAAGTTGGTCTTCCTGA+TGG + tig0041587:817-836 Msa1461550:CDS 45.0%
GGAACATCCTCAGAAATGCT+TGG + tig0041587:868-887 Msa1461550:CDS 45.0%
GAATCGGAGGCAAGAAGTTA+TGG + tig0041587:1228-1247 Msa1461550:CDS 45.0%
GGGATTAAGTCTTGGAGTGT+AGG + tig0041587:1315-1334 Msa1461550:CDS 45.0%
GTGTAGGACCAGTTTCAACT+TGG + tig0041587:1331-1350 Msa1461550:CDS 45.0%
ATATTGGATCACCCTGCAAC+AGG + tig0041587:1675-1694 Msa1461550:CDS 45.0%
TCACAATTCCTCCTGTTGCA+GGG - tig0041587:1689-1708 None:intergenic 45.0%
GAATTGTGACTCACTGTGGT+TGG + tig0041587:1700-1719 Msa1461550:CDS 45.0%
GTGTAGAGGCAATGGTTAGA+AGG + tig0041587:1874-1893 Msa1461550:CDS 45.0%
! AAAGGCTGCGGAGATTTTGT+TGG + tig0041587:1908-1927 Msa1461550:CDS 45.0%
! AAGGCTGCGGAGATTTTGTT+GGG + tig0041587:1909-1928 Msa1461550:CDS 45.0%
! GCGGAGATTTTGTTGGGAAA+TGG + tig0041587:1915-1934 Msa1461550:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - tig0041587:1991-2010 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + tig0041587:1990-2009 Msa1461550:CDS 45.0%
TGCTTTCTCACCAAGTGCTT+TGG - tig0041587:2072-2091 None:intergenic 45.0%
! TTAAGAGGTGTAGCTGGTGA+AGG + tig0041587:2129-2148 Msa1461550:three_prime_UTR 45.0%
!! GCTGGTGAAGGCATTAGATA+TGG + tig0041587:2141-2160 Msa1461550:three_prime_UTR 45.0%
ATATGGCCAGGAGTTGGATA+TGG - tig0041587:640-659 None:intergenic 45.0%
ATCATGGGAATCATATGGCC+AGG - tig0041587:652-671 None:intergenic 45.0%
GGAAGACCAACTTGAGATGA+AGG - tig0041587:814-833 None:intergenic 45.0%
!! TCTCAAGTTGGTCTTCCTGA+TGG + tig0041587:817-836 Msa1461550:CDS 45.0%
GGAACATCCTCAGAAATGCT+TGG + tig0041587:868-887 Msa1461550:CDS 45.0%
GAATCGGAGGCAAGAAGTTA+TGG + tig0041587:1228-1247 Msa1461550:CDS 45.0%
GGGATTAAGTCTTGGAGTGT+AGG + tig0041587:1315-1334 Msa1461550:CDS 45.0%
GTGTAGGACCAGTTTCAACT+TGG + tig0041587:1331-1350 Msa1461550:CDS 45.0%
ATATTGGATCACCCTGCAAC+AGG + tig0041587:1675-1694 Msa1461550:CDS 45.0%
TCACAATTCCTCCTGTTGCA+GGG - tig0041587:1689-1708 None:intergenic 45.0%
GAATTGTGACTCACTGTGGT+TGG + tig0041587:1700-1719 Msa1461550:CDS 45.0%
GTGTAGAGGCAATGGTTAGA+AGG + tig0041587:1874-1893 Msa1461550:CDS 45.0%
! AAAGGCTGCGGAGATTTTGT+TGG + tig0041587:1908-1927 Msa1461550:CDS 45.0%
! AAGGCTGCGGAGATTTTGTT+GGG + tig0041587:1909-1928 Msa1461550:CDS 45.0%
! GCGGAGATTTTGTTGGGAAA+TGG + tig0041587:1915-1934 Msa1461550:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - tig0041587:1991-2010 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + tig0041587:1990-2009 Msa1461550:CDS 45.0%
TGCTTTCTCACCAAGTGCTT+TGG - tig0041587:2072-2091 None:intergenic 45.0%
! TTAAGAGGTGTAGCTGGTGA+AGG + tig0041587:2129-2148 Msa1461550:three_prime_UTR 45.0%
!! GCTGGTGAAGGCATTAGATA+TGG + tig0041587:2141-2160 Msa1461550:three_prime_UTR 45.0%
GGAATCATATGGCCAGGAGT+TGG - tig0041587:646-665 None:intergenic 50.0%
CGGTTCCCTTCATCTCAAGT+TGG + tig0041587:805-824 Msa1461550:CDS 50.0%
CGGCTCATCTCAATGGTATG+AGG - tig0041587:1144-1163 None:intergenic 50.0%
GCACATGGGCTTGAAAAGTC+AGG + tig0041587:1519-1538 Msa1461550:CDS 50.0%
AAATGATAGAGACGAGGGCG+AGG + tig0041587:1569-1588 Msa1461550:CDS 50.0%
GGCACCACAGCTTCTCATAT+TGG + tig0041587:1659-1678 Msa1461550:CDS 50.0%
GTCACAATTCCTCCTGTTGC+AGG - tig0041587:1690-1709 None:intergenic 50.0%
GGAGGAATTGTGACTCACTG+TGG + tig0041587:1696-1715 Msa1461550:CDS 50.0%
TTTGAAGATAGGGGTCCCAG+TGG + tig0041587:1818-1837 Msa1461550:CDS 50.0%
TTGAAGATAGGGGTCCCAGT+GGG + tig0041587:1819-1838 Msa1461550:CDS 50.0%
GGAAGAGATTGCAAAGGCTG+CGG + tig0041587:1896-1915 Msa1461550:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + tig0041587:1983-2002 Msa1461550:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + tig0041587:1987-2006 Msa1461550:CDS 50.0%
! GCTGCATTAAGAGGTGTAGC+TGG + tig0041587:2123-2142 Msa1461550:three_prime_UTR 50.0%
GGAATCATATGGCCAGGAGT+TGG - tig0041587:646-665 None:intergenic 50.0%
CGGTTCCCTTCATCTCAAGT+TGG + tig0041587:805-824 Msa1461550:CDS 50.0%
CGGCTCATCTCAATGGTATG+AGG - tig0041587:1144-1163 None:intergenic 50.0%
GCACATGGGCTTGAAAAGTC+AGG + tig0041587:1519-1538 Msa1461550:CDS 50.0%
AAATGATAGAGACGAGGGCG+AGG + tig0041587:1569-1588 Msa1461550:CDS 50.0%
GGCACCACAGCTTCTCATAT+TGG + tig0041587:1659-1678 Msa1461550:CDS 50.0%
GTCACAATTCCTCCTGTTGC+AGG - tig0041587:1690-1709 None:intergenic 50.0%
GGAGGAATTGTGACTCACTG+TGG + tig0041587:1696-1715 Msa1461550:CDS 50.0%
TTTGAAGATAGGGGTCCCAG+TGG + tig0041587:1818-1837 Msa1461550:CDS 50.0%
TTGAAGATAGGGGTCCCAGT+GGG + tig0041587:1819-1838 Msa1461550:CDS 50.0%
GGAAGAGATTGCAAAGGCTG+CGG + tig0041587:1896-1915 Msa1461550:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + tig0041587:1983-2002 Msa1461550:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + tig0041587:1987-2006 Msa1461550:CDS 50.0%
! GCTGCATTAAGAGGTGTAGC+TGG + tig0041587:2123-2142 Msa1461550:three_prime_UTR 50.0%
! GCAGCTGATTCCACAGTCCA+AGG - tig0041587:988-1007 None:intergenic 55.0%
CTGCAGACGGCTCATCTCAA+TGG - tig0041587:1151-1170 None:intergenic 55.0%
CCCAATCACGAAGCTGCAGA+CGG - tig0041587:1164-1183 None:intergenic 55.0%
CCGTCTGCAGCTTCGTGATT+GGG + tig0041587:1161-1180 Msa1461550:intron 55.0%
TTGGATCACCCTGCAACAGG+AGG + tig0041587:1678-1697 Msa1461550:CDS 55.0%
AGTTTGGCGATGCTGCCAAG+AGG + tig0041587:1973-1992 Msa1461550:CDS 55.0%
! GCAGCTGATTCCACAGTCCA+AGG - tig0041587:988-1007 None:intergenic 55.0%
CTGCAGACGGCTCATCTCAA+TGG - tig0041587:1151-1170 None:intergenic 55.0%
CCCAATCACGAAGCTGCAGA+CGG - tig0041587:1164-1183 None:intergenic 55.0%
CCGTCTGCAGCTTCGTGATT+GGG + tig0041587:1161-1180 Msa1461550:intron 55.0%
TTGGATCACCCTGCAACAGG+AGG + tig0041587:1678-1697 Msa1461550:CDS 55.0%
AGTTTGGCGATGCTGCCAAG+AGG + tig0041587:1973-1992 Msa1461550:CDS 55.0%
GCCGTCTGCAGCTTCGTGAT+TGG + tig0041587:1160-1179 Msa1461550:intron 60.0%
AAAGGCCAATAGGGGACGCG+CGG + tig0041587:1374-1393 Msa1461550:CDS 60.0%
GATAGAGACGAGGGCGAGGA+AGG + tig0041587:1573-1592 Msa1461550:CDS 60.0%
GCCGTCTGCAGCTTCGTGAT+TGG + tig0041587:1160-1179 Msa1461550:intron 60.0%
AAAGGCCAATAGGGGACGCG+CGG + tig0041587:1374-1393 Msa1461550:CDS 60.0%
GATAGAGACGAGGGCGAGGA+AGG + tig0041587:1573-1592 Msa1461550:CDS 60.0%
CTTCTCCGCGCGTCCCCTAT+TGG - tig0041587:1382-1401 None:intergenic 65.0%
GGACGCGCGGAGAAGAACGT+TGG + tig0041587:1387-1406 Msa1461550:CDS 65.0%
CTTCTCCGCGCGTCCCCTAT+TGG - tig0041587:1382-1401 None:intergenic 65.0%
GGACGCGCGGAGAAGAACGT+TGG + tig0041587:1387-1406 Msa1461550:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0041587 gene 592 2323 592 ID=Msa1461550;Name=Msa1461550
tig0041587 mRNA 592 2323 592 ID=Msa1461550-mRNA-1;Parent=Msa1461550;Name=Msa1461550-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.5|0.33|1|0.5|0.66|3|226|417
tig0041587 exon 592 763 592 ID=Msa1461550-mRNA-1:exon:23231;Parent=Msa1461550-mRNA-1
tig0041587 exon 779 933 779 ID=Msa1461550-mRNA-1:exon:23232;Parent=Msa1461550-mRNA-1
tig0041587 exon 1171 2323 1171 ID=Msa1461550-mRNA-1:exon:23233;Parent=Msa1461550-mRNA-1
tig0041587 CDS 592 763 592 ID=Msa1461550-mRNA-1:cds;Parent=Msa1461550-mRNA-1
tig0041587 CDS 779 933 779 ID=Msa1461550-mRNA-1:cds;Parent=Msa1461550-mRNA-1
tig0041587 CDS 1171 2097 1171 ID=Msa1461550-mRNA-1:cds;Parent=Msa1461550-mRNA-1
tig0041587 three_prime_UTR 2098 2323 2098 ID=Msa1461550-mRNA-1:three_prime_utr;Parent=Msa1461550-mRNA-1
Gene Sequence

>Msa1461550

ATGGAGTCTCAACAATCCAATAACCAACTTCATGTAGTTTTTCTTCCATATCCAACTCCTGGCCATATGATTCCCATGATAGACACAGCAAGACTATTTGCAAAGCATGGTGTTAATGTTACCATCATCACTACACATGCCAATGCTTCAACATTCCAAGAATCCATAGACAGATACTCTATCAAAACTCAGCTTATTCGGTTCCCTTCATCTCAAGTTGGTCTTCCTGATGGAATTGAAAATGTCAAAGATGTTAAAGCTGGAACATCCTCAGAAATGCTTGGTAAAATCAGTCATGGAATGTTAATGCTCAGAGATCCTATTGAGCTTCGTGATTGGGTGAAGACTACAAATGCTGCCACAGCCTATTTTGAACCAATTTTTGAATCGGAGGCAAGAAGTTATGGGACAATATGCAATAGTTTTCATGAACTTGAAAGTGATTATGAGAAACTTAGTAAAACTACAATGGGGATTAAGTCTTGGAGTGTAGGACCAGTTTCAACTTGGGCTAACAAGGATGATGAAAGAAAGGCCAATAGGGGACGCGCGGAGAAGAACGTTGGAAAAGAGACAGAATTGCTAAATTGGCTCAACTCAAAGCAAAATGAGTCTGTGTTGTATGTAAGTTTTGGAAGCCTTACTAAGCTTTTTCATGCTCAGCTTGTAGAAATTGCACATGGGCTTGAAAAGTCAGGTCATAATTTTATCTGGGTTGTAAGGAAAAATGATAGAGACGAGGGCGAGGAAGGTTTTCTGCAAGATTTTGAGGAAAGGGTGAAAGAAAGCAACAAGGGCTATATCATATGGAGTTGGGCACCACAGCTTCTCATATTGGATCACCCTGCAACAGGAGGAATTGTGACTCACTGTGGTTGGAACTCAACACTTGAAAGCATTAGTGTTGGTTTGCCAATGATCACATGGCCAATGTTTGCCGAACAATTTTACAATGAGAGGCTGCTTGTTGATGTTTTGAAGATAGGGGTCCCAGTGGGAGCAAAAGAAAACAAGTTATGGAATAGCTTTAGTGTAGAGGCAATGGTTAGAAGGGAAGAGATTGCAAAGGCTGCGGAGATTTTGTTGGGAAATGGTCAAGACATCAAAGAAATGAGGATGAGAGCAAAAAAGTTTGGCGATGCTGCCAAGAGGACTATAGAGGAAGGTGGACACTCTTACAACAACTTGGTTCAGTTGATAGATGAGCTGAAATCATTGAAGAAATCCAAAGCACTTGGTGAGAAAGCAGATTAG

Protein sequence

>Msa1461550

MESQQSNNQLHVVFLPYPTPGHMIPMIDTARLFAKHGVNVTIITTHANASTFQESIDRYSIKTQLIRFPSSQVGLPDGIENVKDVKAGTSSEMLGKISHGMLMLRDPIELRDWVKTTNAATAYFEPIFESEARSYGTICNSFHELESDYEKLSKTTMGIKSWSVGPVSTWANKDDERKANRGRAEKNVGKETELLNWLNSKQNESVLYVSFGSLTKLFHAQLVEIAHGLEKSGHNFIWVVRKNDRDEGEEGFLQDFEERVKESNKGYIIWSWAPQLLILDHPATGGIVTHCGWNSTLESISVGLPMITWPMFAEQFYNERLLVDVLKIGVPVGAKENKLWNSFSVEAMVRREEIAKAAEILLGNGQDIKEMRMRAKKFGDAAKRTIEEGGHSYNNLVQLIDELKSLKKSKALGEKAD*