Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319060 | sp|Q8NBL1|PGLT1_HUMAN | 26.197 | 355 | 227 | 12 | 70 | 407 | 54 | 390 | 8.30e-26 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319060 | A0A072TP09 | 88.939 | 443 | 49 | 0 | 17 | 459 | 42 | 484 | 0.0 | 840 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1319060 | -0.805025 | 1.628769e-49 | -8.615850e-47 |
| Msa0027020 | Msa1319060 | -0.819222 | 1.300809e-52 | -8.615850e-47 |
| Msa0075820 | Msa1319060 | -0.806585 | 7.660464e-50 | -8.615850e-47 |
| Msa0093360 | Msa1319060 | -0.826123 | 3.223809e-54 | -8.615850e-47 |
| Msa0615460 | Msa1319060 | -0.828164 | 1.046467e-54 | -8.615850e-47 |
| Msa0654850 | Msa1319060 | -0.839901 | 1.200520e-57 | -8.615850e-47 |
| Msa0695250 | Msa1319060 | -0.812398 | 4.324975e-51 | -8.615850e-47 |
| Msa0698510 | Msa1319060 | -0.820975 | 5.163584e-53 | -8.615850e-47 |
| Msa0698680 | Msa1319060 | -0.815542 | 8.762975e-52 | -8.615850e-47 |
| Msa0766170 | Msa1319060 | 0.830791 | 2.406469e-55 | -8.615850e-47 |
| Msa0167160 | Msa1319060 | -0.816776 | 4.644739e-52 | -8.615850e-47 |
| Msa0167570 | Msa1319060 | -0.801534 | 8.605565e-49 | -8.615850e-47 |
| Msa0225280 | Msa1319060 | -0.800542 | 1.372625e-48 | -8.615850e-47 |
| Msa1238280 | Msa1319060 | 0.824287 | 8.760195e-54 | -8.615850e-47 |
| Msa1319060 | Msa1341850 | -0.806343 | 8.615413e-50 | -8.615850e-47 |
| Msa1319060 | Msa1350590 | -0.802567 | 5.277569e-49 | -8.615850e-47 |
| Msa1319060 | Msa1372460 | -0.801913 | 7.194264e-49 | -8.615850e-47 |
| Msa1319060 | Msa1415510 | -0.812704 | 3.708890e-51 | -8.615850e-47 |
| Msa0474660 | Msa1319060 | -0.801322 | 9.512153e-49 | -8.615850e-47 |
| Msa1002550 | Msa1319060 | -0.822636 | 2.131007e-53 | -8.615850e-47 |
| Msa1035050 | Msa1319060 | 0.803213 | 3.881316e-49 | -8.615850e-47 |
| Msa1069250 | Msa1319060 | 0.805545 | 1.267707e-49 | -8.615850e-47 |
| Msa1075090 | Msa1319060 | 0.804711 | 1.894558e-49 | -8.615850e-47 |
| Msa1078120 | Msa1319060 | -0.805546 | 1.266956e-49 | -8.615850e-47 |
| Msa1084890 | Msa1319060 | 0.800108 | 1.682149e-48 | -8.615850e-47 |
| Msa0261350 | Msa1319060 | -0.801984 | 6.955869e-49 | -8.615850e-47 |
| Msa0262350 | Msa1319060 | -0.802408 | 5.691272e-49 | -8.615850e-47 |
| Msa0266330 | Msa1319060 | -0.808242 | 3.410203e-50 | -8.615850e-47 |
| Msa0299130 | Msa1319060 | -0.804494 | 2.103246e-49 | -8.615850e-47 |
| Msa0340700 | Msa1319060 | -0.803048 | 4.199141e-49 | -8.615850e-47 |
| Msa0341950 | Msa1319060 | -0.806390 | 8.419815e-50 | -8.615850e-47 |
| Msa1121920 | Msa1319060 | -0.814076 | 1.852150e-51 | -8.615850e-47 |
| Msa1130150 | Msa1319060 | -0.826779 | 2.248905e-54 | -8.615850e-47 |
| Msa1156100 | Msa1319060 | -0.801475 | 8.846485e-49 | -8.615850e-47 |
| Msa1175340 | Msa1319060 | -0.801665 | 8.089112e-49 | -8.615850e-47 |
| Msa1191320 | Msa1319060 | 0.844700 | 6.428448e-59 | -8.615850e-47 |
| Msa0492330 | Msa1319060 | -0.801040 | 1.085880e-48 | -8.615850e-47 |
| Msa0506700 | Msa1319060 | -0.801851 | 7.409468e-49 | -8.615850e-47 |
| Msa0550990 | Msa1319060 | -0.804467 | 2.130388e-49 | -8.615850e-47 |
| Msa0557440 | Msa1319060 | -0.803086 | 4.123536e-49 | -8.615850e-47 |
| Msa0561450 | Msa1319060 | -0.825101 | 5.633200e-54 | -8.615850e-47 |
| Msa0868500 | Msa1319060 | -0.801544 | 8.564051e-49 | -8.615850e-47 |
| Msa0882480 | Msa1319060 | -0.825634 | 4.212968e-54 | -8.615850e-47 |
| Msa0888520 | Msa1319060 | -0.808859 | 2.518135e-50 | -8.615850e-47 |
| Msa0925940 | Msa1319060 | 0.804319 | 2.287391e-49 | -8.615850e-47 |
| Msa0945160 | Msa1319060 | -0.815798 | 7.685889e-52 | -8.615850e-47 |
| Msa0958960 | Msa1319060 | -0.811344 | 7.338004e-51 | -8.615850e-47 |
| Msa0966580 | Msa1319060 | 0.801915 | 7.186506e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319060 | MtrunA17_Chr8g0349371 | 88.939 | 443 | 49 | 0 | 17 | 459 | 42 | 484 | 0.0 | 840 |
| Msa1319060 | MtrunA17_Chr8g0349361 | 73.673 | 471 | 114 | 4 | 10 | 475 | 49 | 514 | 0.0 | 731 |
| Msa1319060 | MtrunA17_Chr5g0397701 | 64.160 | 399 | 128 | 5 | 50 | 445 | 91 | 477 | 0.0 | 550 |
| Msa1319060 | MtrunA17_Chr6g0471441 | 58.891 | 433 | 164 | 7 | 34 | 459 | 69 | 494 | 0.0 | 537 |
| Msa1319060 | MtrunA17_Chr8g0349241 | 53.881 | 438 | 197 | 5 | 22 | 457 | 52 | 486 | 9.03e-178 | 509 |
| Msa1319060 | MtrunA17_Chr7g0247251 | 53.904 | 397 | 173 | 5 | 50 | 439 | 3 | 396 | 3.78e-162 | 465 |
| Msa1319060 | MtrunA17_Chr7g0247261 | 51.456 | 412 | 188 | 6 | 35 | 439 | 37 | 443 | 6.62e-160 | 461 |
| Msa1319060 | MtrunA17_Chr3g0104841 | 45.799 | 369 | 190 | 6 | 70 | 437 | 106 | 465 | 5.15e-118 | 355 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1319060 | AT2G45830.4 | 67.092 | 392 | 126 | 3 | 69 | 459 | 118 | 507 | 0.0 | 573 |
| Msa1319060 | AT2G45830.1 | 67.092 | 392 | 126 | 3 | 69 | 459 | 118 | 507 | 0.0 | 573 |
| Msa1319060 | AT5G23850.1 | 61.215 | 428 | 158 | 5 | 29 | 454 | 101 | 522 | 0.0 | 560 |
| Msa1319060 | AT3G61270.1 | 59.219 | 461 | 180 | 5 | 1 | 459 | 30 | 484 | 0.0 | 559 |
| Msa1319060 | AT2G45830.3 | 66.848 | 368 | 119 | 3 | 93 | 459 | 1 | 366 | 0.0 | 528 |
| Msa1319060 | AT2G45830.6 | 66.848 | 368 | 119 | 3 | 93 | 459 | 1 | 366 | 0.0 | 528 |
| Msa1319060 | AT2G45830.2 | 66.848 | 368 | 119 | 3 | 93 | 459 | 1 | 366 | 0.0 | 528 |
| Msa1319060 | AT2G45830.5 | 66.848 | 368 | 119 | 3 | 93 | 459 | 1 | 366 | 0.0 | 528 |
| Msa1319060 | AT3G48980.2 | 54.464 | 448 | 192 | 6 | 25 | 462 | 88 | 533 | 0.0 | 521 |
| Msa1319060 | AT3G48980.1 | 54.464 | 448 | 192 | 6 | 25 | 462 | 82 | 527 | 0.0 | 520 |
| Msa1319060 | AT3G61270.2 | 65.668 | 367 | 124 | 2 | 93 | 459 | 1 | 365 | 1.14e-180 | 512 |
| Msa1319060 | AT1G63420.1 | 57.007 | 421 | 172 | 4 | 51 | 462 | 150 | 570 | 7.91e-175 | 504 |
| Msa1319060 | AT3G61280.1 | 54.348 | 414 | 184 | 3 | 50 | 459 | 111 | 523 | 2.44e-166 | 481 |
| Msa1319060 | AT3G61290.1 | 52.530 | 415 | 191 | 3 | 50 | 459 | 24 | 437 | 5.36e-157 | 455 |
| Msa1319060 | AT2G45840.1 | 51.748 | 429 | 195 | 5 | 37 | 459 | 85 | 507 | 6.89e-157 | 457 |
| Msa1319060 | AT1G63420.2 | 60.390 | 308 | 116 | 3 | 51 | 352 | 150 | 457 | 2.14e-133 | 395 |
| Msa1319060 | AT1G07220.1 | 46.618 | 414 | 201 | 9 | 59 | 471 | 110 | 504 | 1.51e-131 | 392 |
| Msa1319060 | AT3G61280.2 | 54.545 | 242 | 107 | 1 | 50 | 288 | 111 | 352 | 1.10e-91 | 285 |
Find 113 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTCTTAGTTGCATAAA+AGG | 0.166412 | 8_4:-21234085 | Msa1319060:CDS |
| TCTTTCCTGATTGGTCCTTT+TGG | 0.211010 | 8_4:-21233640 | Msa1319060:CDS |
| CTAAAACCATGGAGAGAAAA+AGG | 0.213324 | 8_4:-21233956 | Msa1319060:CDS |
| CCCTGGCAAGTTGCCTGATT+TGG | 0.228837 | 8_4:-21233780 | Msa1319060:CDS |
| ATCTACCAGGCACAGGTAAT+AGG | 0.278020 | 8_4:-21229912 | Msa1319060:intron |
| AACTAAGAAGAAAATCTTCT+TGG | 0.280895 | 8_4:+21234095 | None:intergenic |
| GCATAAAAGGAAAATCTTTC+AGG | 0.285092 | 8_4:-21234072 | Msa1319060:CDS |
| TGGTAACAAAAGGAGGTTTA+TGG | 0.288780 | 8_4:-21229721 | Msa1319060:CDS |
| TGGTGCCATTACAACATTAT+TGG | 0.306283 | 8_4:-21230145 | Msa1319060:CDS |
| ATAGAGTACCTTATGCTTAC+TGG | 0.308051 | 8_4:-21230906 | Msa1319060:CDS |
| TGGATATTGTCTTTCCTGAT+TGG | 0.315039 | 8_4:-21233649 | Msa1319060:CDS |
| TTTGTCCCTCATACTTTAGA+TGG | 0.317721 | 8_4:-21233991 | Msa1319060:CDS |
| TCTTAAGTTTGCTGTGGAAT+GGG | 0.325309 | 8_4:-21230093 | Msa1319060:CDS |
| CATTTACTATTGTCTCTAAT+AGG | 0.329746 | 8_4:+21230122 | None:intergenic |
| AAAGGAGGTGGTTTAGCATT+TGG | 0.331324 | 8_4:+21233701 | None:intergenic |
| CTCTTAAGTTTGCTGTGGAA+TGG | 0.346070 | 8_4:-21230094 | Msa1319060:CDS |
| TGTAAAGTTAAGGGATCATA+TGG | 0.360691 | 8_4:+21229645 | None:intergenic |
| TCTACCAGGCACAGGTAATA+GGG | 0.361195 | 8_4:-21229911 | Msa1319060:intron |
| ATGTAACATTGCATTGTAGA+AGG | 0.368839 | 8_4:+21230848 | None:intergenic |
| TTAGATATTGTTCAAATCAA+TGG | 0.371772 | 8_4:-21233676 | Msa1319060:CDS |
| ACATGGTTGGTAAGATTTGT+TGG | 0.393881 | 8_4:+21234013 | None:intergenic |
| TGCCTAGTTGGAGCAACATA+AGG | 0.395852 | 8_4:+21230874 | None:intergenic |
| CAAGAGATGTGTTTACTTTG+TGG | 0.400032 | 8_4:-21233829 | Msa1319060:CDS |
| GAAGAAAATCTTCTTGGTTG+TGG | 0.401043 | 8_4:+21234101 | None:intergenic |
| AACTTATCCATAGGCACAAC+AGG | 0.402047 | 8_4:+21233731 | None:intergenic |
| TTTGTTGGGTTATGTGTTGT+AGG | 0.404667 | 8_4:+21234028 | None:intergenic |
| AGACTGTATTTGTGGTTGAT+TGG | 0.415949 | 8_4:+21234124 | None:intergenic |
| GGTTTCAACAAATCCAACTT+AGG | 0.419553 | 8_4:-21230675 | Msa1319060:CDS |
| ATGTTACATTAGAAAATGAT+TGG | 0.422826 | 8_4:-21230834 | Msa1319060:CDS |
| ATGGATCCATCTAAAGTATG+AGG | 0.427483 | 8_4:+21233985 | None:intergenic |
| GAGAAAACTAGAAGAAGAAA+TGG | 0.429234 | 8_4:-21228415 | Msa1319060:CDS |
| CATGGTTGGTAAGATTTGTT+GGG | 0.430133 | 8_4:+21234014 | None:intergenic |
| TCCAAATCAGGCAACTTGCC+AGG | 0.431840 | 8_4:+21233779 | None:intergenic |
| ACATGTTGGAGGGTGCAAAA+AGG | 0.434320 | 8_4:-21233922 | Msa1319060:CDS |
| AAGAGATGTGTTTACTTTGT+GGG | 0.437198 | 8_4:-21233828 | Msa1319060:CDS |
| ACAGCTCCTCTAGGTATAGT+TGG | 0.445298 | 8_4:+21229786 | None:intergenic |
| AGATAAGCCTGTTGTGCCTA+TGG | 0.445845 | 8_4:-21233738 | Msa1319060:CDS |
| TCAAACATAAGTTCCAAATC+AGG | 0.446282 | 8_4:+21233767 | None:intergenic |
| ATCCTTAAAGATATAAAAGA+AGG | 0.450370 | 8_4:-21230952 | Msa1319060:CDS |
| CGAAGGAGCTAGTCTAATGT+TGG | 0.451129 | 8_4:-21234241 | Msa1319060:five_prime_UTR |
| AAGTAAACACATCTCTTGTC+TGG | 0.457072 | 8_4:+21233834 | None:intergenic |
| GGTTGTGGAGACTGTATTTG+TGG | 0.457757 | 8_4:+21234116 | None:intergenic |
| AAAAGCAAGTTCAACGAAGC+AGG | 0.458835 | 8_4:-21229607 | Msa1319060:intron |
| AGTACATTGGTCCCCTAAGT+TGG | 0.460514 | 8_4:+21230662 | None:intergenic |
| TTTCCCTTCCAGTAAGCATA+AGG | 0.462161 | 8_4:+21230898 | None:intergenic |
| GCCTAGTTGGAGCAACATAA+GGG | 0.464514 | 8_4:+21230875 | None:intergenic |
| GTTTCAACAAATCCAACTTA+GGG | 0.466088 | 8_4:-21230674 | Msa1319060:CDS |
| ATGTAATAAGTGGTAACAAA+AGG | 0.489061 | 8_4:-21229731 | Msa1319060:CDS |
| GAACACTCTCCTTTACATAC+AGG | 0.490491 | 8_4:-21230812 | Msa1319060:intron |
| GAGGTTTATGGAAGAGTCAA+TGG | 0.493780 | 8_4:-21229709 | Msa1319060:CDS |
| AATTCTATATCAGACTTAGC+TGG | 0.494566 | 8_4:+21234181 | None:intergenic |
| TTGTTGGGTTATGTGTTGTA+GGG | 0.494723 | 8_4:+21234029 | None:intergenic |
| ATAGGCCAATAATGTTGTAA+TGG | 0.494794 | 8_4:+21230140 | None:intergenic |
| GTGCCTATGGATAAGTTTCA+AGG | 0.495249 | 8_4:-21233725 | Msa1319060:CDS |
| TTCAAGCTTGTGATTGTGGA+TGG | 0.510075 | 8_4:-21233890 | Msa1319060:CDS |
| AGGTACAAGATATACATAGA+AGG | 0.514367 | 8_4:-21230263 | Msa1319060:CDS |
| CATCCCCAAAAGGACCAATC+AGG | 0.514711 | 8_4:+21233635 | None:intergenic |
| TAGGGGACCAATGTACTCAT+AGG | 0.518424 | 8_4:-21230656 | Msa1319060:intron |
| TAACATTTACCATCCCCAAA+AGG | 0.521850 | 8_4:+21233625 | None:intergenic |
| ACAAGATATACATAGAAGGA+TGG | 0.528604 | 8_4:-21230259 | Msa1319060:CDS |
| TTGTTCAAATCAATGGAGCT+TGG | 0.530145 | 8_4:-21233669 | Msa1319060:CDS |
| CAAATTTCCACAGCTCCTCT+AGG | 0.531706 | 8_4:+21229777 | None:intergenic |
| TAGAGGTGTTCATACGAGTT+CGG | 0.535645 | 8_4:-21228356 | Msa1319060:CDS |
| TATACATAGAAGGATGGGCT+TGG | 0.537356 | 8_4:-21230253 | Msa1319060:CDS |
| CATAGACATGAAAGATGAAG+AGG | 0.538902 | 8_4:-21228323 | Msa1319060:CDS |
| GGACCTTGAAACTTATCCAT+AGG | 0.542435 | 8_4:+21233722 | None:intergenic |
| CTTAAGTTTGCTGTGGAATG+GGG | 0.549127 | 8_4:-21230092 | Msa1319060:CDS |
| GTACCTTATGCTTACTGGAA+GGG | 0.550406 | 8_4:-21230901 | Msa1319060:CDS |
| CACCTCTCTTAAGTTTGCTG+TGG | 0.554273 | 8_4:-21230099 | Msa1319060:CDS |
| GAAGGAGCTAGTCTAATGTT+GGG | 0.555030 | 8_4:-21234240 | Msa1319060:five_prime_UTR |
| TGGATACAAGAATCTAATCA+AGG | 0.555171 | 8_4:-21230696 | Msa1319060:CDS |
| AGAGATGTGTTTACTTTGTG+GGG | 0.555512 | 8_4:-21233827 | Msa1319060:CDS |
| ACATTTCAAGCTTGTGATTG+TGG | 0.560222 | 8_4:-21233894 | Msa1319060:CDS |
| CAAGATATACATAGAAGGAT+GGG | 0.562972 | 8_4:-21230258 | Msa1319060:CDS |
| TCTTTAAGGATACTGTTCCA+TGG | 0.563784 | 8_4:+21230964 | None:intergenic |
| GTATGTGGAGAAGTATAAGA+AGG | 0.564105 | 8_4:-21233861 | Msa1319060:CDS |
| GCAAAACTGGCAAGTCATAG+AGG | 0.566541 | 8_4:-21228373 | Msa1319060:CDS |
| GATCACAGGGAACATGTTGG+AGG | 0.568354 | 8_4:-21233933 | Msa1319060:CDS |
| GGACTTTACATATAATGTCA+TGG | 0.570834 | 8_4:+21230196 | None:intergenic |
| GTTAAGGGATCATATGGAGG+AGG | 0.575099 | 8_4:+21229651 | None:intergenic |
| TAATAAGTGGTAACAAAAGG+AGG | 0.576495 | 8_4:-21229728 | Msa1319060:CDS |
| TATGGAAGAGTCAATGGTGA+AGG | 0.576833 | 8_4:-21229703 | Msa1319060:CDS |
| AACTATACCTAGAGGAGCTG+TGG | 0.578398 | 8_4:-21229784 | Msa1319060:CDS |
| ATGACATGTGATGTAATAAG+TGG | 0.579608 | 8_4:-21229741 | Msa1319060:CDS |
| AGTACCTTATGCTTACTGGA+AGG | 0.582193 | 8_4:-21230902 | Msa1319060:CDS |
| GGGCAACAATAACACTCAGC+AGG | 0.584971 | 8_4:-21230072 | Msa1319060:intron |
| GCACAGGTAATAGGGGAGGC+TGG | 0.585413 | 8_4:-21229903 | Msa1319060:CDS |
| CCAAATCAGGCAACTTGCCA+GGG | 0.586953 | 8_4:+21233780 | None:intergenic |
| TCCATGAAGATCTAAAACCA+TGG | 0.587436 | 8_4:-21233967 | Msa1319060:CDS |
| TGTGGATGGAAAGATGTATG+TGG | 0.599452 | 8_4:-21233876 | Msa1319060:CDS |
| ATCACAGGGAACATGTTGGA+GGG | 0.601191 | 8_4:-21233932 | Msa1319060:CDS |
| TTTGAACAATATCTAAACAA+AGG | 0.604236 | 8_4:+21233683 | None:intergenic |
| TATGGAGGAGGAATAGTGCA+TGG | 0.604369 | 8_4:+21229663 | None:intergenic |
| ACCCTTATGTTGCTCCAACT+AGG | 0.608204 | 8_4:-21230876 | Msa1319060:CDS |
| TCCTTAAAGATATAAAAGAA+GGG | 0.608799 | 8_4:-21230951 | Msa1319060:CDS |
| GACATATAATTGATCTACGA+AGG | 0.610502 | 8_4:-21234258 | Msa1319060:five_prime_UTR |
| CAATATCTAAACAAAGGAGG+TGG | 0.612934 | 8_4:+21233689 | None:intergenic |
| CTACCAGGCACAGGTAATAG+GGG | 0.615702 | 8_4:-21229910 | Msa1319060:intron |
| TGGTAGCAAATTCATGCAAG+AGG | 0.621330 | 8_4:-21229883 | Msa1319060:CDS |
| TGGATCCATCTAAAGTATGA+GGG | 0.622254 | 8_4:+21233986 | None:intergenic |
| CAGATACTAATATAAAGCCA+TGG | 0.629562 | 8_4:-21230981 | Msa1319060:CDS |
| GTATGAGGGACAAACATGGT+TGG | 0.633484 | 8_4:+21234000 | None:intergenic |
| TCACCTACCTATGAGTACAT+TGG | 0.633848 | 8_4:+21230649 | None:intergenic |
| AGGGATCACAGGGAACATGT+TGG | 0.638354 | 8_4:-21233936 | Msa1319060:CDS |
| AAAGTTAAGGGATCATATGG+AGG | 0.643798 | 8_4:+21229648 | None:intergenic |
| GAACAATATCTAAACAAAGG+AGG | 0.648196 | 8_4:+21233686 | None:intergenic |
| GTGCATGGATTTGAATCACT+AGG | 0.649772 | 8_4:+21229678 | None:intergenic |
| TAAAGTATGAGGGACAAACA+TGG | 0.661067 | 8_4:+21233996 | None:intergenic |
| TTTCAACAAATCCAACTTAG+GGG | 0.669976 | 8_4:-21230673 | Msa1319060:CDS |
| TTCCACAGCAAACTTAAGAG+AGG | 0.672028 | 8_4:+21230097 | None:intergenic |
| TTCAAACCAACTATACCTAG+AGG | 0.684725 | 8_4:-21229792 | Msa1319060:CDS |
| CCAGGCACAGGTAATAGGGG+AGG | 0.690039 | 8_4:-21229907 | Msa1319060:intron |
| AGGTACTCTATCCTTCCACA+TGG | 0.693984 | 8_4:+21230918 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGTAAATAAATAAAAACA+AGG | + | chr8_4:21229059-21229078 | None:intergenic | 10.0% |
| !! | TAATATTTATATTTATACAC+CGG | - | chr8_4:21229229-21229248 | Msa1319060:intron | 10.0% |
| !!! | TTTATCTTTGATTTTTTTTA+GGG | + | chr8_4:21229512-21229531 | None:intergenic | 10.0% |
| !! | CAAAAAAAAAAATTAAACTT+TGG | + | chr8_4:21230496-21230515 | None:intergenic | 10.0% |
| !!! | ATAAAATAATAATAGCTTTA+AGG | - | chr8_4:21230716-21230735 | Msa1319060:intron | 10.0% |
| !!! | TTTTTTTGTTTTTATTTAAG+AGG | - | chr8_4:21230912-21230931 | Msa1319060:CDS | 10.0% |
| !! | AAAATAAAAAATTCATACAA+GGG | + | chr8_4:21231416-21231435 | None:intergenic | 10.0% |
| !! | AAAAATAAAAAATTCATACA+AGG | + | chr8_4:21231417-21231436 | None:intergenic | 10.0% |
| !!! | TTAAATAACTTTTAAATGTA+TGG | + | chr8_4:21233581-21233600 | None:intergenic | 10.0% |
| !! | TATTCTTTAAATATTTATCA+AGG | - | chr8_4:21233634-21233653 | Msa1319060:intron | 10.0% |
| !!! | ATTAATAGAGTCTTATATAT+AGG | + | chr8_4:21229101-21229120 | None:intergenic | 15.0% |
| !!! | CTTTATCTTTGATTTTTTTT+AGG | + | chr8_4:21229513-21229532 | None:intergenic | 15.0% |
| !!! | ATTTTATCTAAGTAAAAAGT+TGG | - | chr8_4:21230059-21230078 | Msa1319060:intron | 15.0% |
| !! | ATATAATAGTTACCATTAAA+AGG | - | chr8_4:21230849-21230868 | Msa1319060:CDS | 15.0% |
| !! | ATATTGTATCATATTTGTAA+CGG | - | chr8_4:21230977-21230996 | Msa1319060:CDS | 15.0% |
| !!! | TCTTTGATAATGTTAATTTT+AGG | + | chr8_4:21231893-21231912 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTATTATAGCCT+TGG | - | chr8_4:21232648-21232667 | Msa1319060:intron | 15.0% |
| !!! | AAAAGTTTTTGTAAAGTTAA+GGG | + | chr8_4:21233012-21233031 | None:intergenic | 15.0% |
| !!! | TAAAAGTTTTTGTAAAGTTA+AGG | + | chr8_4:21233013-21233032 | None:intergenic | 15.0% |
| !!! | CTGTAGATAAATTTATTTTT+GGG | - | chr8_4:21233358-21233377 | Msa1319060:intron | 15.0% |
| !!! | TCATGTATTTTGTAAATTAT+AGG | - | chr8_4:21234178-21234197 | Msa1319060:CDS | 15.0% |
| !! | TTTGAACAATATCTAAACAA+AGG | + | chr8_4:21228965-21228984 | None:intergenic | 20.0% |
| !! | TTAGATATTGTTCAAATCAA+TGG | - | chr8_4:21228969-21228988 | Msa1319060:intron | 20.0% |
| !! | ATATAAGACTCTATTAATCA+AGG | - | chr8_4:21229103-21229122 | Msa1319060:intron | 20.0% |
| !! | GAGAAAATAAGTTATTGAAT+AGG | - | chr8_4:21229532-21229551 | Msa1319060:intron | 20.0% |
| !! | CATAATTTATAGTATGTTGA+TGG | - | chr8_4:21229743-21229762 | Msa1319060:CDS | 20.0% |
| !!! | ATTTTGGTGATCAAATTTAA+AGG | + | chr8_4:21229907-21229926 | None:intergenic | 20.0% |
| !! | TTCATTTGTATTATCAACAT+AGG | + | chr8_4:21229989-21230008 | None:intergenic | 20.0% |
| !!! | TTAAAAGAGATCTTTTAAAG+TGG | - | chr8_4:21230012-21230031 | Msa1319060:intron | 20.0% |
| !!! | TACCAATAGATTTTAGATTA+CGG | - | chr8_4:21230303-21230322 | Msa1319060:intron | 20.0% |
| !! | AAAAAATTAAACTTTGGTTG+TGG | + | chr8_4:21230490-21230509 | None:intergenic | 20.0% |
| !!! | ATTTTATAGATCATCTCTAT+TGG | + | chr8_4:21230703-21230722 | None:intergenic | 20.0% |
| !! | TAATTTAATCCTTCATCATA+AGG | + | chr8_4:21231208-21231227 | None:intergenic | 20.0% |
| !! | AAAGAATGTTAAGAAAAGAA+GGG | + | chr8_4:21231631-21231650 | None:intergenic | 20.0% |
| !! | TAAAGAATGTTAAGAAAAGA+AGG | + | chr8_4:21231632-21231651 | None:intergenic | 20.0% |
| !!! | TAACATTCTTTACTTTTAAC+AGG | - | chr8_4:21231640-21231659 | Msa1319060:intron | 20.0% |
| !!! | AACATTCTTTACTTTTAACA+GGG | - | chr8_4:21231641-21231660 | Msa1319060:intron | 20.0% |
| !! | ATCCTTAAAGATATAAAAGA+AGG | - | chr8_4:21231693-21231712 | Msa1319060:intron | 20.0% |
| !! | TCCTTAAAGATATAAAAGAA+GGG | - | chr8_4:21231694-21231713 | Msa1319060:intron | 20.0% |
| !! | ATGTTACATTAGAAAATGAT+TGG | - | chr8_4:21231811-21231830 | Msa1319060:intron | 20.0% |
| !! | AAATGTATCAATAATTGATG+GGG | + | chr8_4:21231868-21231887 | None:intergenic | 20.0% |
| !! | CAAATGTATCAATAATTGAT+GGG | + | chr8_4:21231869-21231888 | None:intergenic | 20.0% |
| !! | ACAAATGTATCAATAATTGA+TGG | + | chr8_4:21231870-21231889 | None:intergenic | 20.0% |
| !! | ACATTATCAAAGACAAATTA+AGG | - | chr8_4:21231900-21231919 | Msa1319060:intron | 20.0% |
| !! | ATTAAGGTAATGTGTATATT+TGG | - | chr8_4:21231916-21231935 | Msa1319060:intron | 20.0% |
| !! | GTTAAGAGTTAGTTATATAT+CGG | + | chr8_4:21232312-21232331 | None:intergenic | 20.0% |
| !!! | TAAAATGATACATGTGATTT+TGG | - | chr8_4:21232351-21232370 | Msa1319060:intron | 20.0% |
| !! | AGTTAGTGAAAAATACATTA+TGG | - | chr8_4:21232417-21232436 | Msa1319060:intron | 20.0% |
| !! | TATGAAAAAATCATGGTAAT+TGG | + | chr8_4:21232473-21232492 | None:intergenic | 20.0% |
| !!! | CATAAAATGTTTTTGTTACA+AGG | - | chr8_4:21232689-21232708 | Msa1319060:intron | 20.0% |
| !! | ACTAATTAATGCCATATATT+TGG | - | chr8_4:21233263-21233282 | Msa1319060:intron | 20.0% |
| !!! | ACTTGAATTTTCCAAATATA+TGG | + | chr8_4:21233277-21233296 | None:intergenic | 20.0% |
| !!! | GCTGTAGATAAATTTATTTT+TGG | - | chr8_4:21233357-21233376 | Msa1319060:intron | 20.0% |
| !! | ATACCATTATAGCAATAAAA+TGG | + | chr8_4:21233950-21233969 | None:intergenic | 20.0% |
| !!! | AAGAAAAAAAGCATATGAAA+TGG | + | chr8_4:21234045-21234064 | None:intergenic | 20.0% |
| !!! | ATTTTGTAAATTATAGGAAG+AGG | - | chr8_4:21234184-21234203 | Msa1319060:CDS | 20.0% |
| !!! | TTTTTGAAGTACATATTTGC+AGG | - | chr8_4:21228488-21228507 | Msa1319060:intron | 25.0% |
| ! | AACTAAGAAGAAAATCTTCT+TGG | + | chr8_4:21228553-21228572 | None:intergenic | 25.0% |
| ! | TTTCTTCTTAGTTGCATAAA+AGG | - | chr8_4:21228560-21228579 | Msa1319060:intron | 25.0% |
| !! | CAATTATTAAGATTTTACCC+TGG | - | chr8_4:21228848-21228867 | Msa1319060:intron | 25.0% |
| ! | ATAAAAACAAGGAAGAAAGT+TGG | + | chr8_4:21229048-21229067 | None:intergenic | 25.0% |
| ! | CATGAGGAAAATAAATTGAA+AGG | + | chr8_4:21229330-21229349 | None:intergenic | 25.0% |
| !!! | TGATAGACACATTTTGATTT+TGG | + | chr8_4:21229482-21229501 | None:intergenic | 25.0% |
| !!! | TTGTTTCTAACTTTCTATCA+TGG | - | chr8_4:21229686-21229705 | Msa1319060:CDS | 25.0% |
| ! | TGGTATATGTTATATATTGC+AGG | - | chr8_4:21229706-21229725 | Msa1319060:CDS | 25.0% |
| !! | TTGATGGCTAAATTATATCA+TGG | - | chr8_4:21229759-21229778 | Msa1319060:CDS | 25.0% |
| ! | GTTACAAACTTCAAACTTAA+AGG | + | chr8_4:21229787-21229806 | None:intergenic | 25.0% |
| ! | TGATCACCAAAATAACTTAA+AGG | - | chr8_4:21229914-21229933 | Msa1319060:intron | 25.0% |
| ! | TCTTATACATAAACAACCTT+AGG | - | chr8_4:21230098-21230117 | Msa1319060:CDS | 25.0% |
| ! | ATTAAACCTAGGAAAAAGAT+AGG | + | chr8_4:21230276-21230295 | None:intergenic | 25.0% |
| !! | CTTTTTCCTAGGTTTAATTA+CGG | - | chr8_4:21230278-21230297 | Msa1319060:intron | 25.0% |
| !! | TTCCGTAATCTAAAATCTAT+TGG | + | chr8_4:21230308-21230327 | None:intergenic | 25.0% |
| !!! | TTTTTTCTCTCTCTTTTCAT+TGG | - | chr8_4:21230381-21230400 | Msa1319060:intron | 25.0% |
| !! | TTTTCATTGGTCAAAAACAA+TGG | - | chr8_4:21230394-21230413 | Msa1319060:intron | 25.0% |
| ! | GAGAAAAAAGTTGTAGAAAA+TGG | - | chr8_4:21230420-21230439 | Msa1319060:intron | 25.0% |
| ! | TTGTACAAATATCATTTCTC+CGG | - | chr8_4:21230443-21230462 | Msa1319060:intron | 25.0% |
| !! | GGTGTATAATTATTTCTTTC+CGG | + | chr8_4:21230465-21230484 | None:intergenic | 25.0% |
| !!! | CTTTATTTTTTACAAATGCG+AGG | + | chr8_4:21230881-21230900 | None:intergenic | 25.0% |
| ! | ATTTGTAACGGTTAAAGTAA+CGG | - | chr8_4:21230989-21231008 | Msa1319060:intron | 25.0% |
| !! | TCCCTTCTTTTATATCTTTA+AGG | + | chr8_4:21231698-21231717 | None:intergenic | 25.0% |
| !!! | TACCATGATTTTTTCATAAG+AGG | - | chr8_4:21232475-21232494 | Msa1319060:intron | 25.0% |
| ! | CATTTACTATTGTCTCTAAT+AGG | + | chr8_4:21232526-21232545 | None:intergenic | 25.0% |
| !! | TCACATGTCATTAATTTTTC+AGG | + | chr8_4:21232895-21232914 | None:intergenic | 25.0% |
| ! | ATGTAATAAGTGGTAACAAA+AGG | - | chr8_4:21232914-21232933 | Msa1319060:intron | 25.0% |
| ! | TGAATATTGGAGTAAAAACA+AGG | - | chr8_4:21233077-21233096 | Msa1319060:intron | 25.0% |
| ! | GCACTTAAAATAAAAACAGA+GGG | + | chr8_4:21233130-21233149 | None:intergenic | 25.0% |
| ! | AGCACTTAAAATAAAAACAG+AGG | + | chr8_4:21233131-21233150 | None:intergenic | 25.0% |
| ! | TAAGCAAGAGTAATTAAGAA+AGG | + | chr8_4:21233227-21233246 | None:intergenic | 25.0% |
| !!! | AAACAATTTGGTTTTAGCTA+CGG | + | chr8_4:21233416-21233435 | None:intergenic | 25.0% |
| !!! | AATCACATGATTTTCTAAAG+TGG | + | chr8_4:21233615-21233634 | None:intergenic | 25.0% |
| ! | AATATTTGCAAACTCAAATG+AGG | + | chr8_4:21233667-21233686 | None:intergenic | 25.0% |
| ! | CAAATTCAATTAAGATTTCC+TGG | - | chr8_4:21233691-21233710 | Msa1319060:CDS | 25.0% |
| ! | TAAAATATGTTCTCGTGAAA+AGG | - | chr8_4:21233716-21233735 | Msa1319060:CDS | 25.0% |
| ! | ATGTAAGGTGATAAAAAACA+AGG | + | chr8_4:21233866-21233885 | None:intergenic | 25.0% |
| ! | GAACTTGAATAGCAATAAAA+TGG | + | chr8_4:21233915-21233934 | None:intergenic | 25.0% |
| !! | CATCCATTTTATTGCTATAA+TGG | - | chr8_4:21233944-21233963 | Msa1319060:CDS | 25.0% |
| !!! | TTGCATTCTTATTTTTGACA+GGG | + | chr8_4:21234256-21234275 | None:intergenic | 25.0% |
| !!! | TTTGCATTCTTATTTTTGAC+AGG | + | chr8_4:21234257-21234276 | None:intergenic | 25.0% |
| ! | CAAAAATAAGAATGCAAAAC+TGG | - | chr8_4:21234259-21234278 | Msa1319060:five_prime_UTR | 25.0% |
| GACATATAATTGATCTACGA+AGG | - | chr8_4:21228387-21228406 | Msa1319060:CDS | 30.0% | |
| AATTCTATATCAGACTTAGC+TGG | + | chr8_4:21228467-21228486 | None:intergenic | 30.0% | |
| GCATAAAAGGAAAATCTTTC+AGG | - | chr8_4:21228573-21228592 | Msa1319060:intron | 30.0% | |
| TAAAACCATGGAGAGAAAAA+GGG | - | chr8_4:21228690-21228709 | Msa1319060:intron | 30.0% | |
| AAGAGATGTGTTTACTTTGT+GGG | - | chr8_4:21228817-21228836 | Msa1319060:intron | 30.0% | |
| TCAAACATAAGTTCCAAATC+AGG | + | chr8_4:21228881-21228900 | None:intergenic | 30.0% | |
| GAACAATATCTAAACAAAGG+AGG | + | chr8_4:21228962-21228981 | None:intergenic | 30.0% | |
| TTACATCATGAGTGTTATGA+GGG | + | chr8_4:21229256-21229275 | None:intergenic | 30.0% | |
| TCTATATCCAATCATTCTCT+CGG | - | chr8_4:21229297-21229316 | Msa1319060:intron | 30.0% | |
| AATAGGTGTCTAGAAAATTG+AGG | - | chr8_4:21229549-21229568 | Msa1319060:intron | 30.0% | |
| CTATCTTTCATGAGAGAATT+TGG | - | chr8_4:21229660-21229679 | Msa1319060:CDS | 30.0% | |
| ! | AGTTTGAAGTTTGTAACACA+TGG | - | chr8_4:21229790-21229809 | Msa1319060:CDS | 30.0% |
| ! | GTTTGAAGTTTGTAACACAT+GGG | - | chr8_4:21229791-21229810 | Msa1319060:CDS | 30.0% |
| GTGTAACCAAAACAACTTAA+AGG | + | chr8_4:21229818-21229837 | None:intergenic | 30.0% | |
| !! | ATCGGTCCTTTAAGTTATTT+TGG | + | chr8_4:21229923-21229942 | None:intergenic | 30.0% |
| ATTACAAGCCTCAAACTTAA+AGG | - | chr8_4:21229945-21229964 | Msa1319060:intron | 30.0% | |
| ACATAGGCTAAATTACACTA+GGG | + | chr8_4:21229973-21229992 | None:intergenic | 30.0% | |
| AACATAGGCTAAATTACACT+AGG | + | chr8_4:21229974-21229993 | None:intergenic | 30.0% | |
| TATACATAAACAACCTTAGG+TGG | - | chr8_4:21230101-21230120 | Msa1319060:CDS | 30.0% | |
| ATTGGAAGAAGAGATGAAAA+GGG | - | chr8_4:21230171-21230190 | Msa1319060:CDS | 30.0% | |
| ! | ACATGAGAGGTGTATAAAAA+AGG | - | chr8_4:21230243-21230262 | Msa1319060:CDS | 30.0% |
| ! | CATGAGAGGTGTATAAAAAA+GGG | - | chr8_4:21230244-21230263 | Msa1319060:CDS | 30.0% |
| AAATTAAACTTTGGTTGTGG+CGG | + | chr8_4:21230487-21230506 | None:intergenic | 30.0% | |
| TTATAGATCATCTCTATTGG+AGG | + | chr8_4:21230700-21230719 | None:intergenic | 30.0% | |
| GTCTATAGCAAGAATTTGAA+CGG | - | chr8_4:21230741-21230760 | Msa1319060:intron | 30.0% | |
| !!! | TTTTTTAAGGGTATGTCTCT+AGG | - | chr8_4:21230773-21230792 | Msa1319060:intron | 30.0% |
| !! | CTACCTAGAGTTTTTGTTTA+GGG | + | chr8_4:21230806-21230825 | None:intergenic | 30.0% |
| !! | TCTACCTAGAGTTTTTGTTT+AGG | + | chr8_4:21230807-21230826 | None:intergenic | 30.0% |
| TAGGTAGATGAAATCATAGT+TGG | - | chr8_4:21230819-21230838 | Msa1319060:CDS | 30.0% | |
| !! | GCTAGTTGCTTTATTTGATA+TGG | - | chr8_4:21230934-21230953 | Msa1319060:CDS | 30.0% |
| TTCAACTTCATTGGGATAAA+GGG | - | chr8_4:21231068-21231087 | Msa1319060:intron | 30.0% | |
| AGATAATAGAAAAGCAAGGA+TGG | + | chr8_4:21231172-21231191 | None:intergenic | 30.0% | |
| CATCATAAGGTGATTAATGA+GGG | + | chr8_4:21231195-21231214 | None:intergenic | 30.0% | |
| TCATCATAAGGTGATTAATG+AGG | + | chr8_4:21231196-21231215 | None:intergenic | 30.0% | |
| CATTAATCACCTTATGATGA+AGG | - | chr8_4:21231196-21231215 | Msa1319060:intron | 30.0% | |
| TATTTATAGACAAGCAAACC+AGG | - | chr8_4:21231238-21231257 | Msa1319060:intron | 30.0% | |
| ATATGTCCTTTCAATACCTA+CGG | - | chr8_4:21231280-21231299 | Msa1319060:intron | 30.0% | |
| ! | TTGTGTTAACCTTTTATAGC+AGG | - | chr8_4:21231334-21231353 | Msa1319060:intron | 30.0% |
| TTGTAACATCCTGCTATAAA+AGG | + | chr8_4:21231346-21231365 | None:intergenic | 30.0% | |
| AGTCGTATTCATTTGTAGTT+TGG | - | chr8_4:21231380-21231399 | Msa1319060:intron | 30.0% | |
| TTCATTTGTAGTTTGGCTAA+CGG | - | chr8_4:21231387-21231406 | Msa1319060:intron | 30.0% | |
| ATCAAGTGATTGAATTCAAG+TGG | - | chr8_4:21231514-21231533 | Msa1319060:intron | 30.0% | |
| TGGTTAATGAACTTCCATTA+AGG | - | chr8_4:21231534-21231553 | Msa1319060:intron | 30.0% | |
| GAGAATCTGAATTCAATTCA+TGG | - | chr8_4:21231569-21231588 | Msa1319060:intron | 30.0% | |
| AATCTGAATTCAATTCATGG+CGG | - | chr8_4:21231572-21231591 | Msa1319060:intron | 30.0% | |
| CAGATACTAATATAAAGCCA+TGG | - | chr8_4:21231664-21231683 | Msa1319060:intron | 30.0% | |
| ATGTAACATTGCATTGTAGA+AGG | + | chr8_4:21231800-21231819 | None:intergenic | 30.0% | |
| !! | AAAAAGGTACCTGTATGTAA+AGG | + | chr8_4:21231845-21231864 | None:intergenic | 30.0% |
| TCAATAATTGATGGGGAAAA+AGG | + | chr8_4:21231861-21231880 | None:intergenic | 30.0% | |
| AATGTGTATATTTGGATCAC+AGG | - | chr8_4:21231924-21231943 | Msa1319060:intron | 30.0% | |
| TGGATACAAGAATCTAATCA+AGG | - | chr8_4:21231949-21231968 | Msa1319060:intron | 30.0% | |
| GTTTCAACAAATCCAACTTA+GGG | - | chr8_4:21231971-21231990 | Msa1319060:intron | 30.0% | |
| TTTCAACAAATCCAACTTAG+GGG | - | chr8_4:21231972-21231991 | Msa1319060:intron | 30.0% | |
| CAAAGATCTCTTTAGTGAAA+AGG | - | chr8_4:21232021-21232040 | Msa1319060:intron | 30.0% | |
| TCTTAACATACACATGTATG+AGG | - | chr8_4:21232325-21232344 | Msa1319060:intron | 30.0% | |
| AGGTACAAGATATACATAGA+AGG | - | chr8_4:21232382-21232401 | Msa1319060:intron | 30.0% | |
| ACAAGATATACATAGAAGGA+TGG | - | chr8_4:21232386-21232405 | Msa1319060:intron | 30.0% | |
| CAAGATATACATAGAAGGAT+GGG | - | chr8_4:21232387-21232406 | Msa1319060:intron | 30.0% | |
| GGACTTTACATATAATGTCA+TGG | + | chr8_4:21232452-21232471 | None:intergenic | 30.0% | |
| TGCCTCTTATGAAAAAATCA+TGG | + | chr8_4:21232480-21232499 | None:intergenic | 30.0% | |
| !!! | TGATTTTTTCATAAGAGGCA+TGG | - | chr8_4:21232480-21232499 | Msa1319060:intron | 30.0% |
| ATAGGCCAATAATGTTGTAA+TGG | + | chr8_4:21232508-21232527 | None:intergenic | 30.0% | |
| ACCAGATTCAAATGAGATAT+AGG | - | chr8_4:21232614-21232633 | Msa1319060:intron | 30.0% | |
| !!! | CAGATTTTTTATGTCTACCA+AGG | + | chr8_4:21232668-21232687 | None:intergenic | 30.0% |
| ATTCTCTTAAATCATCTACC+AGG | - | chr8_4:21232720-21232739 | Msa1319060:intron | 30.0% | |
| ATGACATGTGATGTAATAAG+TGG | - | chr8_4:21232904-21232923 | Msa1319060:intron | 30.0% | |
| TAATAAGTGGTAACAAAAGG+AGG | - | chr8_4:21232917-21232936 | Msa1319060:intron | 30.0% | |
| TGTAAAGTTAAGGGATCATA+TGG | + | chr8_4:21233003-21233022 | None:intergenic | 30.0% | |
| AAATCTGGGAAGATGAATAT+TGG | - | chr8_4:21233064-21233083 | Msa1319060:intron | 30.0% | |
| ! | AAAACAAGGCACAATAGTTT+TGG | - | chr8_4:21233091-21233110 | Msa1319060:intron | 30.0% |
| ACAAAATTGTTCAAGTGTGT+AGG | - | chr8_4:21233322-21233341 | Msa1319060:intron | 30.0% | |
| CAAAATTGTTCAAGTGTGTA+GGG | - | chr8_4:21233323-21233342 | Msa1319060:intron | 30.0% | |
| ATCCTATAGTGACGAAATTA+TGG | + | chr8_4:21233449-21233468 | None:intergenic | 30.0% | |
| CAATAGTGTGCTTATATCTA+CGG | + | chr8_4:21233488-21233507 | None:intergenic | 30.0% | |
| CTAAATACATATACCTACGA+CGG | + | chr8_4:21233524-21233543 | None:intergenic | 30.0% | |
| TTAAATGTATGGAGTGCATA+TGG | + | chr8_4:21233570-21233589 | None:intergenic | 30.0% | |
| ! | ACGAGAACATATTTTATTCC+AGG | + | chr8_4:21233712-21233731 | None:intergenic | 30.0% |
| GAAAAGGTTTAATGCGTTTA+TGG | - | chr8_4:21233732-21233751 | Msa1319060:CDS | 30.0% | |
| TGAACTTGAAGAAGAATGTA+AGG | + | chr8_4:21233881-21233900 | None:intergenic | 30.0% | |
| ATGAAAATGAACCAATTCCA+GGG | + | chr8_4:21234139-21234158 | None:intergenic | 30.0% | |
| GAGAAAACTAGAAGAAGAAA+TGG | - | chr8_4:21234230-21234249 | Msa1319060:five_prime_UTR | 30.0% | |
| AGACTGTATTTGTGGTTGAT+TGG | + | chr8_4:21228524-21228543 | None:intergenic | 35.0% | |
| GAAGAAAATCTTCTTGGTTG+TGG | + | chr8_4:21228547-21228566 | None:intergenic | 35.0% | |
| TTGTTGGGTTATGTGTTGTA+GGG | + | chr8_4:21228619-21228638 | None:intergenic | 35.0% | |
| TTTGTTGGGTTATGTGTTGT+AGG | + | chr8_4:21228620-21228639 | None:intergenic | 35.0% | |
| !! | CATGGTTGGTAAGATTTGTT+GGG | + | chr8_4:21228634-21228653 | None:intergenic | 35.0% |
| !! | ACATGGTTGGTAAGATTTGT+TGG | + | chr8_4:21228635-21228654 | None:intergenic | 35.0% |
| TAAAGTATGAGGGACAAACA+TGG | + | chr8_4:21228652-21228671 | None:intergenic | 35.0% | |
| TTTGTCCCTCATACTTTAGA+TGG | - | chr8_4:21228654-21228673 | Msa1319060:intron | 35.0% | |
| ! | TGGATCCATCTAAAGTATGA+GGG | + | chr8_4:21228662-21228681 | None:intergenic | 35.0% |
| ! | ATGGATCCATCTAAAGTATG+AGG | + | chr8_4:21228663-21228682 | None:intergenic | 35.0% |
| ! | TCCATGAAGATCTAAAACCA+TGG | - | chr8_4:21228678-21228697 | Msa1319060:intron | 35.0% |
| !!! | TCCATGGTTTTAGATCTTCA+TGG | + | chr8_4:21228682-21228701 | None:intergenic | 35.0% |
| CTAAAACCATGGAGAGAAAA+AGG | - | chr8_4:21228689-21228708 | Msa1319060:intron | 35.0% | |
| ACATTTCAAGCTTGTGATTG+TGG | - | chr8_4:21228751-21228770 | Msa1319060:intron | 35.0% | |
| ! | GTATGTGGAGAAGTATAAGA+AGG | - | chr8_4:21228784-21228803 | Msa1319060:intron | 35.0% |
| AAGTAAACACATCTCTTGTC+TGG | + | chr8_4:21228814-21228833 | None:intergenic | 35.0% | |
| CAAGAGATGTGTTTACTTTG+TGG | - | chr8_4:21228816-21228835 | Msa1319060:intron | 35.0% | |
| AGAGATGTGTTTACTTTGTG+GGG | - | chr8_4:21228818-21228837 | Msa1319060:intron | 35.0% | |
| CAATATCTAAACAAAGGAGG+TGG | + | chr8_4:21228959-21228978 | None:intergenic | 35.0% | |
| TTGTTCAAATCAATGGAGCT+TGG | - | chr8_4:21228976-21228995 | Msa1319060:intron | 35.0% | |
| TGGATATTGTCTTTCCTGAT+TGG | - | chr8_4:21228996-21229015 | Msa1319060:intron | 35.0% | |
| TAACATTTACCATCCCCAAA+AGG | + | chr8_4:21229023-21229042 | None:intergenic | 35.0% | |
| CAAGTGGTCAATTGAGTTAT+GGG | + | chr8_4:21229146-21229165 | None:intergenic | 35.0% | |
| ACAAGTGGTCAATTGAGTTA+TGG | + | chr8_4:21229147-21229166 | None:intergenic | 35.0% | |
| CTTACATCATGAGTGTTATG+AGG | + | chr8_4:21229257-21229276 | None:intergenic | 35.0% | |
| TAAACACATGAGCAAACATG+AGG | + | chr8_4:21229346-21229365 | None:intergenic | 35.0% | |
| AAAATCCCCCTCATTTAGAT+TGG | - | chr8_4:21229408-21229427 | Msa1319060:intron | 35.0% | |
| ATCATCCAATCTAAATGAGG+GGG | + | chr8_4:21229416-21229435 | None:intergenic | 35.0% | |
| CATCATCCAATCTAAATGAG+GGG | + | chr8_4:21229417-21229436 | None:intergenic | 35.0% | |
| CCATCATCCAATCTAAATGA+GGG | + | chr8_4:21229418-21229437 | None:intergenic | 35.0% | |
| CCTCATTTAGATTGGATGAT+GGG | - | chr8_4:21229416-21229435 | Msa1319060:intron | 35.0% | |
| CTCATTTAGATTGGATGATG+GGG | - | chr8_4:21229417-21229436 | Msa1319060:intron | 35.0% | |
| !!! | ATGGGTCCTTTAAGTTGTTT+TGG | - | chr8_4:21229809-21229828 | Msa1319060:CDS | 35.0% |
| ! | GTTTGAGGCTTGTAATAGAT+CGG | + | chr8_4:21229941-21229960 | None:intergenic | 35.0% |
| CATTGGAAGAAGAGATGAAA+AGG | - | chr8_4:21230170-21230189 | Msa1319060:CDS | 35.0% | |
| TTGGAAGAAGAGATGAAAAG+GGG | - | chr8_4:21230172-21230191 | Msa1319060:CDS | 35.0% | |
| ! | TGTCTACCTATCTTTTTCCT+AGG | - | chr8_4:21230267-21230286 | Msa1319060:intron | 35.0% |
| AATTAAACTTTGGTTGTGGC+GGG | + | chr8_4:21230486-21230505 | None:intergenic | 35.0% | |
| ! | TAAACTTTGGTAACCCACTT+GGG | + | chr8_4:21230620-21230639 | None:intergenic | 35.0% |
| ! | TTAAACTTTGGTAACCCACT+TGG | + | chr8_4:21230621-21230640 | None:intergenic | 35.0% |
| !!! | ACGGTGCTATGGATTTTTTA+AGG | - | chr8_4:21230760-21230779 | Msa1319060:intron | 35.0% |
| !!! | CGGTGCTATGGATTTTTTAA+GGG | - | chr8_4:21230761-21230780 | Msa1319060:intron | 35.0% |
| TCTCCCTAAACAAAAACTCT+AGG | - | chr8_4:21230800-21230819 | Msa1319060:intron | 35.0% | |
| ! | GCGAGGTATATACCTTTTAA+TGG | + | chr8_4:21230864-21230883 | None:intergenic | 35.0% |
| AGAGCAAAGTATACTTTCCA+AGG | + | chr8_4:21231049-21231068 | None:intergenic | 35.0% | |
| ACTTTGCTCTTCAACTTCAT+TGG | - | chr8_4:21231059-21231078 | Msa1319060:intron | 35.0% | |
| CTTTGCTCTTCAACTTCATT+GGG | - | chr8_4:21231060-21231079 | Msa1319060:intron | 35.0% | |
| CTTCAACTTCATTGGGATAA+AGG | - | chr8_4:21231067-21231086 | Msa1319060:intron | 35.0% | |
| TCATTGGGATAAAGGGATAA+AGG | - | chr8_4:21231075-21231094 | Msa1319060:intron | 35.0% | |
| AGGGAGATAATAGAAAAGCA+AGG | + | chr8_4:21231176-21231195 | None:intergenic | 35.0% | |
| TATGTCCTTTCAATACCTAC+GGG | - | chr8_4:21231281-21231300 | Msa1319060:intron | 35.0% | |
| TCTAAATAGTAGATTCCCGT+AGG | + | chr8_4:21231299-21231318 | None:intergenic | 35.0% | |
| TATTTAGATCACCCATCGTT+GGG | - | chr8_4:21231311-21231330 | Msa1319060:intron | 35.0% | |
| TCCATTAAGGCGAATCATTT+AGG | - | chr8_4:21231547-21231566 | Msa1319060:intron | 35.0% | |
| TCCTAAATGATTCGCCTTAA+TGG | + | chr8_4:21231551-21231570 | None:intergenic | 35.0% | |
| ! | TCTTTAAGGATACTGTTCCA+TGG | + | chr8_4:21231684-21231703 | None:intergenic | 35.0% |
| ! | ATAGAGTACCTTATGCTTAC+TGG | - | chr8_4:21231739-21231758 | Msa1319060:intron | 35.0% |
| GGTTTCAACAAATCCAACTT+AGG | - | chr8_4:21231970-21231989 | Msa1319060:intron | 35.0% | |
| ! | GGACAATTTTTATGCAAGAC+TGG | - | chr8_4:21232042-21232061 | Msa1319060:intron | 35.0% |
| GAGAAGTGAATCTTGATCTT+CGG | + | chr8_4:21232194-21232213 | None:intergenic | 35.0% | |
| ! | TTTTAACATGCGCGTCAAAT+TGG | + | chr8_4:21232241-21232260 | None:intergenic | 35.0% |
| !!! | TGATACATGTGATTTTGGCT+TGG | - | chr8_4:21232356-21232375 | Msa1319060:intron | 35.0% |
| !! | TGGTGCCATTACAACATTAT+TGG | - | chr8_4:21232500-21232519 | Msa1319060:intron | 35.0% |
| !! | TCTTAAGTTTGCTGTGGAAT+GGG | - | chr8_4:21232552-21232571 | Msa1319060:intron | 35.0% |
| GCCTATATCTCATTTGAATC+TGG | + | chr8_4:21232618-21232637 | None:intergenic | 35.0% | |
| TTCAAACCAACTATACCTAG+AGG | - | chr8_4:21232853-21232872 | Msa1319060:intron | 35.0% | |
| TGGTAACAAAAGGAGGTTTA+TGG | - | chr8_4:21232924-21232943 | Msa1319060:intron | 35.0% | |
| AAAGTTAAGGGATCATATGG+AGG | + | chr8_4:21233000-21233019 | None:intergenic | 35.0% | |
| CTGAATATGCTCTATACCTA+CGG | - | chr8_4:21233383-21233402 | Msa1319060:intron | 35.0% | |
| !! | AACCAAATTGTTTTGTCCGA+TGG | - | chr8_4:21233423-21233442 | Msa1319060:intron | 35.0% |
| CATATGGTCAAGATTCATGA+TGG | + | chr8_4:21233554-21233573 | None:intergenic | 35.0% | |
| AAAAAACAAGGCTAGACTTG+TGG | + | chr8_4:21233854-21233873 | None:intergenic | 35.0% | |
| ! | GCTATAATGGTATGCCATTT+AGG | - | chr8_4:21233957-21233976 | Msa1319060:CDS | 35.0% |
| ! | ATGGTATGCCATTTAGGATT+TGG | - | chr8_4:21233963-21233982 | Msa1319060:CDS | 35.0% |
| ! | TGGTATGCCATTTAGGATTT+GGG | - | chr8_4:21233964-21233983 | Msa1319060:CDS | 35.0% |
| TACACCAAAATGTTCTGCAA+AGG | - | chr8_4:21234095-21234114 | Msa1319060:CDS | 35.0% | |
| ! | CAATCCTTTGCAGAACATTT+TGG | + | chr8_4:21234102-21234121 | None:intergenic | 35.0% |
| TGAAAATGAACCAATTCCAG+GGG | + | chr8_4:21234138-21234157 | None:intergenic | 35.0% | |
| GATGAAAATGAACCAATTCC+AGG | + | chr8_4:21234140-21234159 | None:intergenic | 35.0% | |
| CATAGACATGAAAGATGAAG+AGG | - | chr8_4:21234322-21234341 | Msa1319060:five_prime_UTR | 35.0% | |
| ! | GAAGGAGCTAGTCTAATGTT+GGG | - | chr8_4:21228405-21228424 | Msa1319060:CDS | 40.0% |
| TTCAAGCTTGTGATTGTGGA+TGG | - | chr8_4:21228755-21228774 | Msa1319060:intron | 40.0% | |
| TGTGGATGGAAAGATGTATG+TGG | - | chr8_4:21228769-21228788 | Msa1319060:intron | 40.0% | |
| AACTTATCCATAGGCACAAC+AGG | + | chr8_4:21228917-21228936 | None:intergenic | 40.0% | |
| GTGCCTATGGATAAGTTTCA+AGG | - | chr8_4:21228920-21228939 | Msa1319060:intron | 40.0% | |
| GGACCTTGAAACTTATCCAT+AGG | + | chr8_4:21228926-21228945 | None:intergenic | 40.0% | |
| AAAGGAGGTGGTTTAGCATT+TGG | + | chr8_4:21228947-21228966 | None:intergenic | 40.0% | |
| !! | TCTTTCCTGATTGGTCCTTT+TGG | - | chr8_4:21229005-21229024 | Msa1319060:intron | 40.0% |
| !! | CTTTCCTGATTGGTCCTTTT+GGG | - | chr8_4:21229006-21229025 | Msa1319060:intron | 40.0% |
| !! | TTTCCTGATTGGTCCTTTTG+GGG | - | chr8_4:21229007-21229026 | Msa1319060:intron | 40.0% |
| GAGCAACAAAGAGACTAATG+TGG | - | chr8_4:21229173-21229192 | Msa1319060:intron | 40.0% | |
| CCCTCATTTAGATTGGATGA+TGG | - | chr8_4:21229415-21229434 | Msa1319060:intron | 40.0% | |
| CCCATCATCCAATCTAAATG+AGG | + | chr8_4:21229419-21229438 | None:intergenic | 40.0% | |
| GATCCTCTCATGTAACATGA+GGG | + | chr8_4:21229454-21229473 | None:intergenic | 40.0% | |
| ! | CTAGGGATCCTTTAAGTTTG+AGG | + | chr8_4:21229956-21229975 | None:intergenic | 40.0% |
| AAATGAGTGTATGCCACCTA+AGG | + | chr8_4:21230117-21230136 | None:intergenic | 40.0% | |
| CACATGTCACAAATGTGTGT+GGG | + | chr8_4:21230143-21230162 | None:intergenic | 40.0% | |
| GTGACATGTGGCAAAAACAT+TGG | - | chr8_4:21230153-21230172 | Msa1319060:CDS | 40.0% | |
| TAAAATACCCCTAGCACATG+AGG | - | chr8_4:21230217-21230236 | Msa1319060:CDS | 40.0% | |
| GGTACACCGTAATTAAACCT+AGG | + | chr8_4:21230287-21230306 | None:intergenic | 40.0% | |
| CGATTCTCAGGTGTCAATTT+GGG | + | chr8_4:21230538-21230557 | None:intergenic | 40.0% | |
| TCGATTCTCAGGTGTCAATT+TGG | + | chr8_4:21230539-21230558 | None:intergenic | 40.0% | |
| !! | GTGGTATTGGCTTGTGATTT+GGG | + | chr8_4:21230589-21230608 | None:intergenic | 40.0% |
| !! | AGTGGTATTGGCTTGTGATT+TGG | + | chr8_4:21230590-21230609 | None:intergenic | 40.0% |
| AATCACAAGCCAATACCACT+AGG | - | chr8_4:21230590-21230609 | Msa1319060:intron | 40.0% | |
| ! | CAAGAATTTGAACGGTGCTA+TGG | - | chr8_4:21230749-21230768 | Msa1319060:intron | 40.0% |
| CGCTTTCTCTTACATCTACT+CGG | - | chr8_4:21231106-21231125 | Msa1319060:intron | 40.0% | |
| CTCGGTTATTGCAGTATCAT+TGG | - | chr8_4:21231124-21231143 | Msa1319060:intron | 40.0% | |
| !! | AGATTCCCGTAGGTATTGAA+AGG | + | chr8_4:21231289-21231308 | None:intergenic | 40.0% |
| CTATTTAGATCACCCATCGT+TGG | - | chr8_4:21231310-21231329 | Msa1319060:intron | 40.0% | |
| AAGGGAACAAAAAGACCATG+TGG | - | chr8_4:21231712-21231731 | Msa1319060:intron | 40.0% | |
| GAACAAAAAGACCATGTGGA+AGG | - | chr8_4:21231716-21231735 | Msa1319060:intron | 40.0% | |
| AGTACCTTATGCTTACTGGA+AGG | - | chr8_4:21231743-21231762 | Msa1319060:intron | 40.0% | |
| GTACCTTATGCTTACTGGAA+GGG | - | chr8_4:21231744-21231763 | Msa1319060:intron | 40.0% | |
| TTTCCCTTCCAGTAAGCATA+AGG | + | chr8_4:21231750-21231769 | None:intergenic | 40.0% | |
| ! | TGTAGAAGGTTTTGCCTAGT+TGG | + | chr8_4:21231786-21231805 | None:intergenic | 40.0% |
| GAACACTCTCCTTTACATAC+AGG | - | chr8_4:21231833-21231852 | Msa1319060:intron | 40.0% | |
| GTATATTTGGATCACAGGAC+TGG | - | chr8_4:21231929-21231948 | Msa1319060:intron | 40.0% | |
| TCACCTACCTATGAGTACAT+TGG | + | chr8_4:21231999-21232018 | None:intergenic | 40.0% | |
| !!! | ATGTGATTTTGGCTTGGCAT+AGG | - | chr8_4:21232362-21232381 | Msa1319060:intron | 40.0% |
| ! | TATACATAGAAGGATGGGCT+TGG | - | chr8_4:21232392-21232411 | Msa1319060:intron | 40.0% |
| TTCCACAGCAAACTTAAGAG+AGG | + | chr8_4:21232551-21232570 | None:intergenic | 40.0% | |
| !! | CTCTTAAGTTTGCTGTGGAA+TGG | - | chr8_4:21232551-21232570 | Msa1319060:intron | 40.0% |
| !! | CTTAAGTTTGCTGTGGAATG+GGG | - | chr8_4:21232553-21232572 | Msa1319060:intron | 40.0% |
| TTAAATCATCTACCAGGCAC+AGG | - | chr8_4:21232726-21232745 | Msa1319060:intron | 40.0% | |
| TGGTAGCAAATTCATGCAAG+AGG | - | chr8_4:21232762-21232781 | Msa1319060:intron | 40.0% | |
| GAGGTTTATGGAAGAGTCAA+TGG | - | chr8_4:21232936-21232955 | Msa1319060:intron | 40.0% | |
| TATGGAAGAGTCAATGGTGA+AGG | - | chr8_4:21232942-21232961 | Msa1319060:intron | 40.0% | |
| GTGCATGGATTTGAATCACT+AGG | + | chr8_4:21232970-21232989 | None:intergenic | 40.0% | |
| AAAAGCAAGTTCAACGAAGC+AGG | - | chr8_4:21233038-21233057 | Msa1319060:intron | 40.0% | |
| AACGAAGCAGGTAGAAATCT+GGG | - | chr8_4:21233050-21233069 | Msa1319060:intron | 40.0% | |
| AGTGACGAAATTATGGCCAT+CGG | + | chr8_4:21233442-21233461 | None:intergenic | 40.0% | |
| GGCCATAATTTCGTCACTAT+AGG | - | chr8_4:21233444-21233463 | Msa1319060:intron | 40.0% | |
| GTCACTATAGGATACAGTCA+CGG | - | chr8_4:21233456-21233475 | Msa1319060:intron | 40.0% | |
| ACCATGAAAAAAACCGTCGT+AGG | - | chr8_4:21233508-21233527 | Msa1319060:intron | 40.0% | |
| !!! | ACCTACGACGGTTTTTTTCA+TGG | + | chr8_4:21233512-21233531 | None:intergenic | 40.0% |
| CTCTTGTCCCAAATCCTAAA+TGG | + | chr8_4:21233974-21233993 | None:intergenic | 40.0% | |
| ! | TTTAGGATTTGGGACAAGAG+CGG | - | chr8_4:21233974-21233993 | Msa1319060:CDS | 40.0% |
| GAAAATGAACCAATTCCAGG+GGG | + | chr8_4:21234137-21234156 | None:intergenic | 40.0% | |
| !! | TAGAGGTGTTCATACGAGTT+CGG | - | chr8_4:21234289-21234308 | Msa1319060:five_prime_UTR | 40.0% |
| ! | CGAAGGAGCTAGTCTAATGT+TGG | - | chr8_4:21228404-21228423 | Msa1319060:CDS | 45.0% |
| GGTTGTGGAGACTGTATTTG+TGG | + | chr8_4:21228532-21228551 | None:intergenic | 45.0% | |
| GTATGAGGGACAAACATGGT+TGG | + | chr8_4:21228648-21228667 | None:intergenic | 45.0% | |
| ! | GTGATCCCTTTTTCTCTCCA+TGG | + | chr8_4:21228698-21228717 | None:intergenic | 45.0% |
| TGGAGAGAAAAAGGGATCAC+AGG | - | chr8_4:21228698-21228717 | Msa1319060:intron | 45.0% | |
| GGAGAGAAAAAGGGATCACA+GGG | - | chr8_4:21228699-21228718 | Msa1319060:intron | 45.0% | |
| ATCACAGGGAACATGTTGGA+GGG | - | chr8_4:21228713-21228732 | Msa1319060:intron | 45.0% | |
| ! | ACATGTTGGAGGGTGCAAAA+AGG | - | chr8_4:21228723-21228742 | Msa1319060:intron | 45.0% |
| AGATAAGCCTGTTGTGCCTA+TGG | - | chr8_4:21228907-21228926 | Msa1319060:intron | 45.0% | |
| TTGTTGCTCTCTCTCACAAG+TGG | + | chr8_4:21229162-21229181 | None:intergenic | 45.0% | |
| TCATGAGTGTTATGAGGGAC+CGG | + | chr8_4:21229251-21229270 | None:intergenic | 45.0% | |
| ATCCAATCATTCTCTCGGAG+AGG | - | chr8_4:21229302-21229321 | Msa1319060:intron | 45.0% | |
| ATCCTCTCCGAGAGAATGAT+TGG | + | chr8_4:21229307-21229326 | None:intergenic | 45.0% | |
| AGACCCTCATGTTACATGAG+AGG | - | chr8_4:21229448-21229467 | Msa1319060:intron | 45.0% | |
| CGATCCTCTCATGTAACATG+AGG | + | chr8_4:21229455-21229474 | None:intergenic | 45.0% | |
| CCACATGTCACAAATGTGTG+TGG | + | chr8_4:21230144-21230163 | None:intergenic | 45.0% | |
| CCACACACATTTGTGACATG+TGG | - | chr8_4:21230141-21230160 | Msa1319060:CDS | 45.0% | |
| ATGTACACCTCATGTGCTAG+GGG | + | chr8_4:21230227-21230246 | None:intergenic | 45.0% | |
| CATGTACACCTCATGTGCTA+GGG | + | chr8_4:21230228-21230247 | None:intergenic | 45.0% | |
| TCATGTACACCTCATGTGCT+AGG | + | chr8_4:21230229-21230248 | None:intergenic | 45.0% | |
| TCTCAGGTGTCAATTTGGGT+GGG | + | chr8_4:21230534-21230553 | None:intergenic | 45.0% | |
| TTCTCAGGTGTCAATTTGGG+TGG | + | chr8_4:21230535-21230554 | None:intergenic | 45.0% | |
| AAGTCTCAGGTTCGATTCTC+AGG | + | chr8_4:21230550-21230569 | None:intergenic | 45.0% | |
| GAGAATCGAACCTGAGACTT+CGG | - | chr8_4:21230550-21230569 | Msa1319060:intron | 45.0% | |
| AGAATCGAACCTGAGACTTC+GGG | - | chr8_4:21230551-21230570 | Msa1319060:intron | 45.0% | |
| ! | CGGTGTTAGCTGAGCAAATT+CGG | - | chr8_4:21231009-21231028 | Msa1319060:intron | 45.0% |
| !! | AGCAAATTCGGTGCTCATGT+TGG | - | chr8_4:21231021-21231040 | Msa1319060:intron | 45.0% |
| GAAAAGCAAGGATGGATCGA+TGG | + | chr8_4:21231164-21231183 | None:intergenic | 45.0% | |
| !! | CCAGGTAGTTTACTGACTTG+CGG | - | chr8_4:21231256-21231275 | Msa1319060:intron | 45.0% |
| !! | CAGGTAGTTTACTGACTTGC+GGG | - | chr8_4:21231257-21231276 | Msa1319060:intron | 45.0% |
| GGTTAACACAACCCAACGAT+GGG | + | chr8_4:21231325-21231344 | None:intergenic | 45.0% | |
| AGGTTAACACAACCCAACGA+TGG | + | chr8_4:21231326-21231345 | None:intergenic | 45.0% | |
| AGGTACTCTATCCTTCCACA+TGG | + | chr8_4:21231730-21231749 | None:intergenic | 45.0% | |
| ACCCTTATGTTGCTCCAACT+AGG | - | chr8_4:21231769-21231788 | Msa1319060:intron | 45.0% | |
| GCCTAGTTGGAGCAACATAA+GGG | + | chr8_4:21231773-21231792 | None:intergenic | 45.0% | |
| TGCCTAGTTGGAGCAACATA+AGG | + | chr8_4:21231774-21231793 | None:intergenic | 45.0% | |
| AGTACATTGGTCCCCTAAGT+TGG | + | chr8_4:21231986-21232005 | None:intergenic | 45.0% | |
| TAGGGGACCAATGTACTCAT+AGG | - | chr8_4:21231989-21232008 | Msa1319060:intron | 45.0% | |
| GGACCAATGTACTCATAGGT+AGG | - | chr8_4:21231993-21232012 | Msa1319060:intron | 45.0% | |
| !! | CACCTCTCTTAAGTTTGCTG+TGG | - | chr8_4:21232546-21232565 | Msa1319060:intron | 45.0% |
| ATCTACCAGGCACAGGTAAT+AGG | - | chr8_4:21232733-21232752 | Msa1319060:intron | 45.0% | |
| TCTACCAGGCACAGGTAATA+GGG | - | chr8_4:21232734-21232753 | Msa1319060:intron | 45.0% | |
| ACAGCTCCTCTAGGTATAGT+TGG | + | chr8_4:21232862-21232881 | None:intergenic | 45.0% | |
| AACTATACCTAGAGGAGCTG+TGG | - | chr8_4:21232861-21232880 | Msa1319060:intron | 45.0% | |
| CAAATTTCCACAGCTCCTCT+AGG | + | chr8_4:21232871-21232890 | None:intergenic | 45.0% | |
| TATGGAGGAGGAATAGTGCA+TGG | + | chr8_4:21232985-21233004 | None:intergenic | 45.0% | |
| GTTAAGGGATCATATGGAGG+AGG | + | chr8_4:21232997-21233016 | None:intergenic | 45.0% | |
| CAACGAAGCAGGTAGAAATC+TGG | - | chr8_4:21233049-21233068 | Msa1319060:intron | 45.0% | |
| GGCCATCGGACAAAACAATT+TGG | + | chr8_4:21233428-21233447 | None:intergenic | 45.0% | |
| GGCTCAAAGCTACAATCAAC+AGG | + | chr8_4:21233833-21233852 | None:intergenic | 45.0% | |
| TCTCGCGAATACATCACGAA+CGG | - | chr8_4:21234019-21234038 | Msa1319060:CDS | 45.0% | |
| TTGCATTGTTTCAATCCCCC+TGG | - | chr8_4:21234119-21234138 | Msa1319060:CDS | 45.0% | |
| TGTTTCAATCCCCCTGGAAT+TGG | - | chr8_4:21234125-21234144 | Msa1319060:CDS | 45.0% | |
| GCAAAACTGGCAAGTCATAG+AGG | - | chr8_4:21234272-21234291 | Msa1319060:five_prime_UTR | 45.0% | |
| !!! | TAAATTTAAAATTTAAACTT+TGG | + | chr8_4:21230633-21230652 | None:intergenic | 5.0% |
| !!! | TTTTTATTTTTTTTAAATTG+TGG | - | chr8_4:21231426-21231445 | Msa1319060:intron | 5.0% |
| AGGGATCACAGGGAACATGT+TGG | - | chr8_4:21228709-21228728 | Msa1319060:intron | 50.0% | |
| GATCACAGGGAACATGTTGG+AGG | - | chr8_4:21228712-21228731 | Msa1319060:intron | 50.0% | |
| CCAAATCAGGCAACTTGCCA+GGG | + | chr8_4:21228868-21228887 | None:intergenic | 50.0% | |
| TCCAAATCAGGCAACTTGCC+AGG | + | chr8_4:21228869-21228888 | None:intergenic | 50.0% | |
| CATCCCCAAAAGGACCAATC+AGG | + | chr8_4:21229013-21229032 | None:intergenic | 50.0% | |
| !! | CTGATTGGTCCTTTTGGGGA+TGG | - | chr8_4:21229011-21229030 | Msa1319060:intron | 50.0% |
| GCACATGAGGTGTACATGAG+AGG | - | chr8_4:21230230-21230249 | Msa1319060:CDS | 50.0% | |
| GAATCGAACCTGAGACTTCG+GGG | - | chr8_4:21230552-21230571 | Msa1319060:intron | 50.0% | |
| !! | TTGGGTTGGCCTAGTGGTAT+TGG | + | chr8_4:21230602-21230621 | None:intergenic | 50.0% |
| ! | CTTTGGTAACCCACTTGGGT+TGG | + | chr8_4:21230616-21230635 | None:intergenic | 50.0% |
| AAGGATGGATCGATGGACGA+TGG | + | chr8_4:21231157-21231176 | None:intergenic | 50.0% | |
| CCGCAAGTCAGTAAACTACC+TGG | + | chr8_4:21231259-21231278 | None:intergenic | 50.0% | |
| GGGCAACAATAACACTCAGC+AGG | - | chr8_4:21232573-21232592 | Msa1319060:intron | 50.0% | |
| CTACCAGGCACAGGTAATAG+GGG | - | chr8_4:21232735-21232754 | Msa1319060:intron | 50.0% | |
| TAGCTACGGATTCTGACCGT+AGG | + | chr8_4:21233402-21233421 | None:intergenic | 50.0% | |
| CCCTGGCAAGTTGCCTGATT+TGG | - | chr8_4:21228865-21228884 | Msa1319060:intron | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | - | chr8_4:21230603-21230622 | Msa1319060:intron | 55.0% | |
| ACCACTAGGCCAACCCAAGT+GGG | - | chr8_4:21230604-21230623 | Msa1319060:intron | 55.0% | |
| CGGTGCTCATGTTGGAACCT+TGG | - | chr8_4:21231029-21231048 | Msa1319060:intron | 55.0% | |
| TCGAACCTGAGACTTCGGGG+AGG | - | chr8_4:21230555-21230574 | Msa1319060:intron | 60.0% | |
| ATGCTCCTCCCCGAAGTCTC+AGG | + | chr8_4:21230563-21230582 | None:intergenic | 60.0% | |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | + | chr8_4:21230608-21230627 | None:intergenic | 60.0% |
| CCTCCCCTATTACCTGTGCC+TGG | + | chr8_4:21232741-21232760 | None:intergenic | 60.0% | |
| CCAGGCACAGGTAATAGGGG+AGG | - | chr8_4:21232738-21232757 | Msa1319060:intron | 60.0% | |
| GCACAGGTAATAGGGGAGGC+TGG | - | chr8_4:21232742-21232761 | Msa1319060:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 21228306 | 21234361 | 21228306 | ID=Msa1319060;Name=Msa1319060 |
| chr8_4 | mRNA | 21228306 | 21234361 | 21228306 | ID=Msa1319060-mRNA-1;Parent=Msa1319060;Name=Msa1319060-mRNA-1;_AED=0.18;_eAED=0.18;_QI=143|0.8|0.66|0.83|1|1|6|0|510 |
| chr8_4 | exon | 21228306 | 21228467 | 21228306 | ID=Msa1319060-mRNA-1:exon:7735;Parent=Msa1319060-mRNA-1 |
| chr8_4 | exon | 21229608 | 21229925 | 21229608 | ID=Msa1319060-mRNA-1:exon:7734;Parent=Msa1319060-mRNA-1 |
| chr8_4 | exon | 21230073 | 21230283 | 21230073 | ID=Msa1319060-mRNA-1:exon:7733;Parent=Msa1319060-mRNA-1 |
| chr8_4 | exon | 21230657 | 21230721 | 21230657 | ID=Msa1319060-mRNA-1:exon:7732;Parent=Msa1319060-mRNA-1 |
| chr8_4 | exon | 21230813 | 21231005 | 21230813 | ID=Msa1319060-mRNA-1:exon:7731;Parent=Msa1319060-mRNA-1 |
| chr8_4 | exon | 21233635 | 21234361 | 21233635 | ID=Msa1319060-mRNA-1:exon:7730;Parent=Msa1319060-mRNA-1 |
| chr8_4 | five_prime_UTR | 21234219 | 21234361 | 21234219 | ID=Msa1319060-mRNA-1:five_prime_utr;Parent=Msa1319060-mRNA-1 |
| chr8_4 | CDS | 21233635 | 21234218 | 21233635 | ID=Msa1319060-mRNA-1:cds;Parent=Msa1319060-mRNA-1 |
| chr8_4 | CDS | 21230813 | 21231005 | 21230813 | ID=Msa1319060-mRNA-1:cds;Parent=Msa1319060-mRNA-1 |
| chr8_4 | CDS | 21230657 | 21230721 | 21230657 | ID=Msa1319060-mRNA-1:cds;Parent=Msa1319060-mRNA-1 |
| chr8_4 | CDS | 21230073 | 21230283 | 21230073 | ID=Msa1319060-mRNA-1:cds;Parent=Msa1319060-mRNA-1 |
| chr8_4 | CDS | 21229608 | 21229925 | 21229608 | ID=Msa1319060-mRNA-1:cds;Parent=Msa1319060-mRNA-1 |
| chr8_4 | CDS | 21228306 | 21228467 | 21228306 | ID=Msa1319060-mRNA-1:cds;Parent=Msa1319060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
