AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1175340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175340 MtrunA17_Chr8g0345631 99.620 263 1 0 1 263 1 263 0.0 536
Msa1175340 MtrunA17_Chr2g0301081 66.822 214 71 0 50 263 49 262 1.13e-104 305
Msa1175340 MtrunA17_Chr3g0092091 50.410 244 111 5 25 266 15 250 1.86e-75 230
Msa1175340 MtrunA17_Chr3g0133901 48.858 219 107 4 55 270 51 267 1.14e-66 208
Msa1175340 MtrunA17_Chr5g0448411 43.644 236 108 7 50 262 36 269 1.11e-52 172
Msa1175340 MtrunA17_Chr5g0448421 43.038 237 109 7 50 262 37 271 2.33e-52 172
Msa1175340 MtrunA17_Chr6g0462031 40.976 205 93 7 66 261 49 234 1.70e-40 140
Msa1175340 MtrunA17_Chr6g0453151 36.704 267 117 12 32 263 80 329 1.47e-38 137
Msa1175340 MtrunA17_Chr6g0453141 36.330 267 118 12 32 263 13 262 5.95e-38 134
Msa1175340 MtrunA17_Chr4g0051941 35.000 280 123 11 1 256 6 250 2.91e-37 132
Msa1175340 MtrunA17_Chr6g0453181 34.884 258 122 10 28 256 9 249 1.92e-36 130
Msa1175340 MtrunA17_Chr5g0447531 37.931 232 105 10 48 256 34 249 2.38e-36 130
Msa1175340 MtrunA17_Chr1g0157481 31.615 291 166 8 1 269 50 329 1.48e-35 129
Msa1175340 MtrunA17_Chr6g0453161 38.723 235 102 10 61 270 54 271 2.61e-35 132
Msa1175340 MtrunA17_Chr6g0453161 33.212 274 137 10 12 256 260 516 1.00e-33 128
Msa1175340 MtrunA17_Chr4g0006181 30.612 294 117 6 31 261 71 340 3.60e-34 126
Msa1175340 MtrunA17_Chr2g0279001 37.668 223 106 6 38 237 36 248 4.61e-34 124
Msa1175340 MtrunA17_Chr2g0318521 34.940 249 121 11 32 256 17 248 2.49e-33 122
Msa1175340 MtrunA17_Chr6g0476641 37.118 229 107 7 61 270 74 284 4.74e-32 119
Msa1175340 MtrunA17_Chr3g0113311 31.535 241 87 7 60 246 54 270 5.66e-25 100
Msa1175340 MtrunA17_Chr6g0464511 35.870 184 84 7 73 256 47 196 7.48e-22 90.5
Msa1175340 MtrunA17_Chr2g0296081 47.778 90 41 2 177 266 19 102 1.76e-16 73.2
Msa1175340 MtrunA17_Chr6g0453171 39.815 108 49 4 159 266 1 92 8.42e-15 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175340 AT3G61470.1 89.545 220 22 1 45 263 33 252 3.48e-146 410
Msa1175340 AT1G19150.1 61.215 214 83 0 50 263 52 265 9.46e-100 293
Msa1175340 AT3G47470.1 53.081 211 93 2 51 261 42 246 1.19e-74 228
Msa1175340 AT1G45474.2 45.455 242 120 4 40 270 16 256 5.93e-64 201
Msa1175340 AT1G45474.1 45.455 242 120 4 40 270 16 256 5.93e-64 201
Msa1175340 AT5G28450.1 90.816 98 9 0 166 263 71 168 4.52e-62 193
Msa1175340 AT1G61520.3 43.265 245 114 8 35 256 19 261 7.38e-54 176
Msa1175340 AT1G61520.1 43.265 245 114 8 35 256 19 261 7.38e-54 176
Msa1175340 AT1G61520.2 45.641 195 87 7 79 256 14 206 4.21e-44 149
Msa1175340 AT3G54890.1 42.439 205 90 7 66 261 48 233 8.33e-42 144
Msa1175340 AT3G27690.2 35.036 274 139 11 4 256 27 282 7.83e-39 137
Msa1175340 AT2G05100.1 36.330 267 132 11 10 256 1 249 1.39e-38 136
Msa1175340 AT1G29930.1 36.653 251 129 9 28 256 9 251 4.46e-38 135
Msa1175340 AT2G34420.1 35.887 248 133 8 28 256 9 249 5.04e-38 134
Msa1175340 AT1G15820.1 38.222 225 108 6 37 237 28 245 5.94e-38 134
Msa1175340 AT2G05070.1 38.785 214 97 8 61 256 52 249 9.95e-38 134
Msa1175340 AT1G29920.1 36.255 251 130 9 28 256 9 251 2.58e-37 133
Msa1175340 AT1G29910.1 36.255 251 130 9 28 256 9 251 2.58e-37 133
Msa1175340 AT3G27690.1 36.293 259 144 9 10 256 1 250 5.30e-37 132
Msa1175340 AT2G34430.1 39.896 193 101 6 72 256 65 250 1.16e-36 131
Msa1175340 AT5G54270.1 38.308 201 92 7 73 256 64 249 9.30e-34 124
Msa1175340 AT5G01530.1 32.677 254 93 5 62 261 54 283 3.04e-33 123
Msa1175340 AT1G76570.1 31.724 290 149 9 3 264 56 324 7.39e-33 122
Msa1175340 AT3G08940.2 32.677 254 93 5 62 261 51 280 3.52e-32 120
Msa1175340 AT4G10340.1 39.706 204 108 7 61 256 65 261 6.11e-31 116
Msa1175340 AT3G54890.2 37.073 205 67 6 66 261 48 199 1.86e-29 110
Msa1175340 AT2G05100.2 32.616 279 143 13 10 264 1 258 4.40e-29 112
Msa1175340 AT3G54890.4 39.286 168 75 6 66 225 48 196 6.91e-29 109
Msa1175340 AT2G40100.1 31.818 242 86 6 62 249 55 271 9.61e-26 102
Msa1175340 AT3G54890.3 58.333 60 25 0 66 125 48 107 5.49e-18 79.3
Msa1175340 AT3G08940.1 31.707 123 35 2 62 141 51 167 1.68e-11 62.8

Find 88 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGATCTTTGTTAGGAATTC+TGG 0.125070 8_1:+6649697 None:intergenic
GGCAGTCTCCCAGGAGATTT+TGG 0.155478 8_1:-6650423 Msa1175340:CDS
CATGGAGGAGGGGTGCTTCC+TGG 0.289446 8_1:+6650453 None:intergenic
TTGGTTTGATCCACTTGGTT+GGG 0.309908 8_1:-6649467 Msa1175340:CDS
TTTGCTCACCTTGCTGATCC+TGG 0.353914 8_1:-6649313 Msa1175340:CDS
GATCCACTTGGTTGGGGAAG+TGG 0.368672 8_1:-6649460 Msa1175340:CDS
CGATCTTTGTTAGGAATTCT+GGG 0.372235 8_1:+6649698 None:intergenic
TCAAGATGCCGATCTTTGTT+AGG 0.378876 8_1:+6649689 None:intergenic
GGGAACCACAAAGGTCTATC+AGG 0.385925 8_1:+6650474 None:intergenic
ATGGAGGAGGGGTGCTTCCT+GGG 0.394126 8_1:+6650454 None:intergenic
ACATTCCATTTCAGACTCTC+TGG 0.395922 8_1:+6649778 None:intergenic
GGAAATTAAGAATGGGAGAT+TGG 0.401117 8_1:-6649404 Msa1175340:CDS
ACCCCTCCTCCATGGCTAGA+TGG 0.401270 8_1:-6650444 Msa1175340:CDS
AGAGACTTGCCTTGGAGAAA+TGG 0.404995 8_1:+6650980 None:intergenic
GTTCCTGTGAGCTTGTTGTT+GGG 0.410233 8_1:+6649514 None:intergenic
AGCTTGTTGTTGGGGAAGAT+AGG 0.412387 8_1:+6649523 None:intergenic
ATTGGCTATGTTGGCTGTGA+TGG 0.416001 8_1:-6649386 Msa1175340:CDS
TCGGTTGGGCCGAGGGTAGA+AGG 0.424965 8_1:-6649585 Msa1175340:CDS
CTGAGCCTGATAGACCTTTG+TGG 0.428063 8_1:-6650479 Msa1175340:CDS
AGTTCCTGTGAGCTTGTTGT+TGG 0.429259 8_1:+6649513 None:intergenic
TGTTGGCTGTGATGGGAGCT+TGG 0.430184 8_1:-6649378 Msa1175340:CDS
CACTGCAGATGGGCAATGTT+GGG 0.431773 8_1:-6649739 Msa1175340:CDS
GCATCTTGAACACACCTTCA+TGG 0.443608 8_1:-6649675 Msa1175340:CDS
TAGGGTACCCTGGTGGACTT+TGG 0.445153 8_1:-6649486 Msa1175340:CDS
TTTGGTTTGATCCACTTGGT+TGG 0.450965 8_1:-6649468 Msa1175340:CDS
GTGGTAGATCTCACTCTAAC+TGG 0.456746 8_1:+6650519 None:intergenic
TCTAAACTAGGAGGTATTGA+TGG 0.461661 8_1:+6649264 None:intergenic
AGAACAAAGGAAATTAAGAA+TGG 0.462272 8_1:-6649412 Msa1175340:CDS
CTGATCCAGAGAGTCTGAAA+TGG 0.467545 8_1:-6649783 Msa1175340:CDS
TGGTTCTCCTCAGAAGCTTA+AGG 0.470286 8_1:-6649440 Msa1175340:CDS
TGGTTTGATCCACTTGGTTG+GGG 0.471868 8_1:-6649466 Msa1175340:CDS
TGGGCAATGTTGGGAGCAGC+AGG 0.473188 8_1:-6649730 Msa1175340:CDS
CAGAGCTTGTGCACTGCAGA+TGG 0.481288 8_1:-6649750 Msa1175340:CDS
GATAGACCTTTGTGGTTCCC+AGG 0.481293 8_1:-6650471 Msa1175340:CDS
GCATGCAGTTCTCAGAAGAA+TGG 0.493993 8_1:-6650609 Msa1175340:intron
AAGCTCACAGGAACTGATGT+AGG 0.494000 8_1:-6649505 Msa1175340:CDS
TGAGCAAAGAGGTTATCAAT+AGG 0.495483 8_1:+6649328 None:intergenic
GAATGGGAGATTGGCTATGT+TGG 0.500964 8_1:-6649395 Msa1175340:CDS
GGATCAAATCCAAAATCTCC+TGG 0.502658 8_1:+6650414 None:intergenic
GGACTTTGGTTTGATCCACT+TGG 0.512408 8_1:-6649472 Msa1175340:CDS
GAACAAAGGAAATTAAGAAT+GGG 0.513870 8_1:-6649411 Msa1175340:CDS
ACACCTTCATGGTACACTGC+TGG 0.517592 8_1:-6649664 Msa1175340:CDS
GGGTCAGTGTTGACACAACC+TGG 0.522086 8_1:+6649544 None:intergenic
GTCAGCCCACCTTCTACCCT+CGG 0.523129 8_1:+6649576 None:intergenic
GCTTGTTGTTGGGGAAGATA+GGG 0.525018 8_1:+6649524 None:intergenic
TGGGCTGACATCCTCAATCC+AGG 0.525106 8_1:-6649562 Msa1175340:CDS
GGATCAAACCAAAGTCCACC+AGG 0.526848 8_1:+6649478 None:intergenic
TTGGCTATGTTGGCTGTGAT+GGG 0.528445 8_1:-6649385 Msa1175340:CDS
CTCAACTCCTTAAGCTTCTG+AGG 0.529219 8_1:+6649433 None:intergenic
TTCCTGTGAGCTTGTTGTTG+GGG 0.534710 8_1:+6649515 None:intergenic
TGGCTAGATGGCAGTCTCCC+AGG 0.536159 8_1:-6650432 Msa1175340:CDS
CAGCACATTTACACTGGCAC+TGG 0.541333 8_1:-6649352 Msa1175340:CDS
GCCATCTAGCCATGGAGGAG+GGG 0.546298 8_1:+6650443 None:intergenic
TTGGGCCGAGGGTAGAAGGT+GGG 0.548941 8_1:-6649581 Msa1175340:CDS
TGCCATCTAGCCATGGAGGA+GGG 0.550191 8_1:+6650442 None:intergenic
CAGTGCCAGTGTAAATGTGC+TGG 0.552448 8_1:+6649353 None:intergenic
AGAAATGGCAACAGCTGCAA+TGG 0.552836 8_1:+6650995 None:intergenic
CCAGAATTCCTAACAAAGAT+CGG 0.554190 8_1:-6649697 Msa1175340:CDS
CAGCTGTTGCCATTTCTCCA+AGG 0.555483 8_1:-6650989 Msa1175340:intron
GCACTGCAGATGGGCAATGT+TGG 0.556685 8_1:-6649740 Msa1175340:CDS
CTGCCATCTAGCCATGGAGG+AGG 0.559386 8_1:+6650441 None:intergenic
CAGGAAGCACCCCTCCTCCA+TGG 0.569573 8_1:-6650452 Msa1175340:CDS
TTCCCCAACAACAAGCTCAC+AGG 0.571770 8_1:-6649517 Msa1175340:CDS
TCAGAAGAATGGATCACCCA+TGG 0.581832 8_1:-6650598 Msa1175340:CDS
GTTGGGCCGAGGGTAGAAGG+TGG 0.588510 8_1:-6649582 Msa1175340:CDS
AGAGCTTGTGCACTGCAGAT+GGG 0.595843 8_1:-6649749 Msa1175340:CDS
TGGTTCCAGCACATTTACAC+TGG 0.596820 8_1:-6649358 Msa1175340:CDS
GGGAGACTGCCATCTAGCCA+TGG 0.602036 8_1:+6650435 None:intergenic
AGCTGCTGCACACACTGTTG+TGG 0.606490 8_1:+6650500 None:intergenic
GGAACTGATGTAGGGTACCC+TGG 0.613660 8_1:-6649496 Msa1175340:CDS
GCTTAAGGAGTTGAGAACAA+AGG 0.614983 8_1:-6649425 Msa1175340:CDS
GTGCTTCCTGGGAACCACAA+AGG 0.617314 8_1:+6650465 None:intergenic
GATCAAATCCAAAATCTCCT+GGG 0.619038 8_1:+6650415 None:intergenic
AGCTCACAGGAACTGATGTA+GGG 0.630925 8_1:-6649504 Msa1175340:CDS
TCTCCAGCAGTGTACCATGA+AGG 0.631666 8_1:+6649661 None:intergenic
TGTTGACACAACCTGGATTG+AGG 0.633547 8_1:+6649551 None:intergenic
CAGAAGAATGGATCACCCAT+GGG 0.634694 8_1:-6650597 Msa1175340:CDS
GATCAGCAAGGTGAGCAAAG+AGG 0.646872 8_1:+6649317 None:intergenic
AATATGCAATCTAAACTAGG+AGG 0.648490 8_1:+6649255 None:intergenic
GCGAAAATAGTAGCATGACC+AGG 0.658859 8_1:+6649295 None:intergenic
GAACCACTTCCCCAACCAAG+TGG 0.665438 8_1:+6649457 None:intergenic
TTAAGCTTACAAAGTCCAAG+AGG 0.666846 8_1:+6650393 None:intergenic
TAGCATGACCAGGATCAGCA+AGG 0.674432 8_1:+6649305 None:intergenic
AGACTGCCATCTAGCCATGG+AGG 0.705683 8_1:+6650438 None:intergenic
CTCAACTATGAAGAGTGTGG+TGG 0.729773 8_1:+6649618 None:intergenic
GAGCTCAACTATGAAGAGTG+TGG 0.734291 8_1:+6649615 None:intergenic
GATCAAACCAAAGTCCACCA+GGG 0.744097 8_1:+6649479 None:intergenic
ACTGATGTAGGGTACCCTGG+TGG 0.744440 8_1:-6649493 Msa1175340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGAAAATAATCTTATAAAA+AGG + chr8_1:6650182-6650201 None:intergenic 10.0%
!! TAGAAAATAATCTTATAAAA+AGG + chr8_1:6650182-6650201 None:intergenic 10.0%
!!! GTTTGACAAATATTTTTAAA+TGG + chr8_1:6649495-6649514 None:intergenic 15.0%
!!! GTTTGACAAATATTTTTAAA+TGG + chr8_1:6649495-6649514 None:intergenic 15.0%
!!! TCAATTTTTTGTTACTGAAT+CGG - chr8_1:6649927-6649946 Msa1175340:intron 20.0%
!!! TCAAGAGGATTTTATATTTA+GGG + chr8_1:6650145-6650164 None:intergenic 20.0%
!! ACATGTAATAAATACTAAGA+TGG - chr8_1:6650276-6650295 Msa1175340:intron 20.0%
!! TCAAGAAAAATTAAGAAAGT+TGG + chr8_1:6650378-6650397 None:intergenic 20.0%
!!! TCAATTTTTTGTTACTGAAT+CGG - chr8_1:6649927-6649946 Msa1175340:intron 20.0%
!!! TCAAGAGGATTTTATATTTA+GGG + chr8_1:6650145-6650164 None:intergenic 20.0%
!! ACATGTAATAAATACTAAGA+TGG - chr8_1:6650276-6650295 Msa1175340:intron 20.0%
!! TCAAGAAAAATTAAGAAAGT+TGG + chr8_1:6650378-6650397 None:intergenic 20.0%
! TATAGTGACCAATTTAACTA+GGG + chr8_1:6649518-6649537 None:intergenic 25.0%
! ATATAGTGACCAATTTAACT+AGG + chr8_1:6649519-6649538 None:intergenic 25.0%
!! GGATTTTCTACATTAGTAAA+AGG + chr8_1:6650079-6650098 None:intergenic 25.0%
! CTTGATCAAATATTCGAATT+TGG + chr8_1:6650100-6650119 None:intergenic 25.0%
!! CTCAAGAGGATTTTATATTT+AGG + chr8_1:6650146-6650165 None:intergenic 25.0%
! GATGTAGCATATACTAATTA+TGG + chr8_1:6650246-6650265 None:intergenic 25.0%
!! TACTCTTTAGAAGAGAAAAT+TGG + chr8_1:6650311-6650330 None:intergenic 25.0%
!! TTTTCTTGATTTAGTCAACA+TGG - chr8_1:6650389-6650408 Msa1175340:intron 25.0%
! CAACACTTTGATGAATATTA+TGG + chr8_1:6650469-6650488 None:intergenic 25.0%
! CATAATATTCATCAAAGTGT+TGG - chr8_1:6650467-6650486 Msa1175340:CDS 25.0%
! AGAACAAAGGAAATTAAGAA+TGG - chr8_1:6650878-6650897 Msa1175340:intron 25.0%
! GAACAAAGGAAATTAAGAAT+GGG - chr8_1:6650879-6650898 Msa1175340:intron 25.0%
! TATAGTGACCAATTTAACTA+GGG + chr8_1:6649518-6649537 None:intergenic 25.0%
! ATATAGTGACCAATTTAACT+AGG + chr8_1:6649519-6649538 None:intergenic 25.0%
!! GGATTTTCTACATTAGTAAA+AGG + chr8_1:6650079-6650098 None:intergenic 25.0%
! CTTGATCAAATATTCGAATT+TGG + chr8_1:6650100-6650119 None:intergenic 25.0%
!! CTCAAGAGGATTTTATATTT+AGG + chr8_1:6650146-6650165 None:intergenic 25.0%
! GATGTAGCATATACTAATTA+TGG + chr8_1:6650246-6650265 None:intergenic 25.0%
!! TACTCTTTAGAAGAGAAAAT+TGG + chr8_1:6650311-6650330 None:intergenic 25.0%
!! TTTTCTTGATTTAGTCAACA+TGG - chr8_1:6650389-6650408 Msa1175340:intron 25.0%
! CAACACTTTGATGAATATTA+TGG + chr8_1:6650469-6650488 None:intergenic 25.0%
! CATAATATTCATCAAAGTGT+TGG - chr8_1:6650467-6650486 Msa1175340:CDS 25.0%
! AGAACAAAGGAAATTAAGAA+TGG - chr8_1:6650878-6650897 Msa1175340:intron 25.0%
! GAACAAAGGAAATTAAGAAT+GGG - chr8_1:6650879-6650898 Msa1175340:intron 25.0%
ATAGTGACCAATTTAACTAG+GGG + chr8_1:6649517-6649536 None:intergenic 30.0%
! TTTTCTTGGAAGGAAATTGA+AGG - chr8_1:6649728-6649747 Msa1175340:CDS 30.0%
TGAATCGGATTGATTACAAT+CGG - chr8_1:6649942-6649961 Msa1175340:intron 30.0%
ATTAGACGAGTTGTATTAGA+CGG - chr8_1:6650024-6650043 Msa1175340:intron 30.0%
! GAGGATTTTATATTTAGGGA+CGG + chr8_1:6650141-6650160 None:intergenic 30.0%
! ATAGTTGAGCTCATTTTCAT+CGG - chr8_1:6650686-6650705 Msa1175340:intron 30.0%
ATAGTGACCAATTTAACTAG+GGG + chr8_1:6649517-6649536 None:intergenic 30.0%
! TTTTCTTGGAAGGAAATTGA+AGG - chr8_1:6649728-6649747 Msa1175340:CDS 30.0%
TGAATCGGATTGATTACAAT+CGG - chr8_1:6649942-6649961 Msa1175340:intron 30.0%
ATTAGACGAGTTGTATTAGA+CGG - chr8_1:6650024-6650043 Msa1175340:intron 30.0%
! GAGGATTTTATATTTAGGGA+CGG + chr8_1:6650141-6650160 None:intergenic 30.0%
! ATAGTTGAGCTCATTTTCAT+CGG - chr8_1:6650686-6650705 Msa1175340:intron 30.0%
TGTCAAACCCCTAGTTAAAT+TGG - chr8_1:6649507-6649526 Msa1175340:CDS 35.0%
GATCAAATCCAAAATCTCCT+GGG + chr8_1:6649878-6649897 None:intergenic 35.0%
! GATTTTGGATTTGATCCTCT+TGG - chr8_1:6649882-6649901 Msa1175340:intron 35.0%
TTAAGCTTACAAAGTCCAAG+AGG + chr8_1:6649900-6649919 None:intergenic 35.0%
ACAACTCGTCTAATCAAGAT+CGG + chr8_1:6650018-6650037 None:intergenic 35.0%
GAGCAATGAAAAAACTCAAG+AGG + chr8_1:6650160-6650179 None:intergenic 35.0%
GGTCATGTATTTAGAGACAA+CGG - chr8_1:6650410-6650429 Msa1175340:CDS 35.0%
!!! GTGGTCTTATTTTCCTTGTT+GGG - chr8_1:6650432-6650451 Msa1175340:CDS 35.0%
CGATCTTTGTTAGGAATTCT+GGG + chr8_1:6650595-6650614 None:intergenic 35.0%
CCAGAATTCCTAACAAAGAT+CGG - chr8_1:6650593-6650612 Msa1175340:CDS 35.0%
GGAAATTAAGAATGGGAGAT+TGG - chr8_1:6650886-6650905 Msa1175340:intron 35.0%
TGAGCAAAGAGGTTATCAAT+AGG + chr8_1:6650965-6650984 None:intergenic 35.0%
TGTCAAACCCCTAGTTAAAT+TGG - chr8_1:6649507-6649526 Msa1175340:CDS 35.0%
GATCAAATCCAAAATCTCCT+GGG + chr8_1:6649878-6649897 None:intergenic 35.0%
! GATTTTGGATTTGATCCTCT+TGG - chr8_1:6649882-6649901 Msa1175340:intron 35.0%
TTAAGCTTACAAAGTCCAAG+AGG + chr8_1:6649900-6649919 None:intergenic 35.0%
ACAACTCGTCTAATCAAGAT+CGG + chr8_1:6650018-6650037 None:intergenic 35.0%
GAGCAATGAAAAAACTCAAG+AGG + chr8_1:6650160-6650179 None:intergenic 35.0%
GGTCATGTATTTAGAGACAA+CGG - chr8_1:6650410-6650429 Msa1175340:CDS 35.0%
!!! GTGGTCTTATTTTCCTTGTT+GGG - chr8_1:6650432-6650451 Msa1175340:CDS 35.0%
CGATCTTTGTTAGGAATTCT+GGG + chr8_1:6650595-6650614 None:intergenic 35.0%
CCAGAATTCCTAACAAAGAT+CGG - chr8_1:6650593-6650612 Msa1175340:CDS 35.0%
GGAAATTAAGAATGGGAGAT+TGG - chr8_1:6650886-6650905 Msa1175340:intron 35.0%
TGAGCAAAGAGGTTATCAAT+AGG + chr8_1:6650965-6650984 None:intergenic 35.0%
CAGTGTCTGACTTTAGTGAT+AGG - chr8_1:6649400-6649419 Msa1175340:CDS 40.0%
!!! AAAGCTTTTGAGGTTCCCAT+GGG + chr8_1:6649711-6649730 None:intergenic 40.0%
!!! AAAAGCTTTTGAGGTTCCCA+TGG + chr8_1:6649712-6649731 None:intergenic 40.0%
! GGAACCTCAAAAGCTTTTCT+TGG - chr8_1:6649714-6649733 Msa1175340:CDS 40.0%
! CCTTCCAAGAAAAGCTTTTG+AGG + chr8_1:6649721-6649740 None:intergenic 40.0%
! CCTCAAAAGCTTTTCTTGGA+AGG - chr8_1:6649718-6649737 Msa1175340:CDS 40.0%
GGATCAAATCCAAAATCTCC+TGG + chr8_1:6649879-6649898 None:intergenic 40.0%
CATGTATTTAGAGACAACGG+TGG - chr8_1:6650413-6650432 Msa1175340:CDS 40.0%
!!! GGTGGTCTTATTTTCCTTGT+TGG - chr8_1:6650431-6650450 Msa1175340:CDS 40.0%
ACATTCCATTTCAGACTCTC+TGG + chr8_1:6650515-6650534 None:intergenic 40.0%
CCGATCTTTGTTAGGAATTC+TGG + chr8_1:6650596-6650615 None:intergenic 40.0%
TCAAGATGCCGATCTTTGTT+AGG + chr8_1:6650604-6650623 None:intergenic 40.0%
! TTGAGCTCATTTTCATCGGT+TGG - chr8_1:6650690-6650709 Msa1175340:intron 40.0%
!! TGAGCTCATTTTCATCGGTT+GGG - chr8_1:6650691-6650710 Msa1175340:intron 40.0%
!! TTTGGTTTGATCCACTTGGT+TGG - chr8_1:6650822-6650841 Msa1175340:intron 40.0%
! TTGGTTTGATCCACTTGGTT+GGG - chr8_1:6650823-6650842 Msa1175340:intron 40.0%
GCTTAAGGAGTTGAGAACAA+AGG - chr8_1:6650865-6650884 Msa1175340:intron 40.0%
CAGTGTCTGACTTTAGTGAT+AGG - chr8_1:6649400-6649419 Msa1175340:CDS 40.0%
!!! AAAGCTTTTGAGGTTCCCAT+GGG + chr8_1:6649711-6649730 None:intergenic 40.0%
!!! AAAAGCTTTTGAGGTTCCCA+TGG + chr8_1:6649712-6649731 None:intergenic 40.0%
! GGAACCTCAAAAGCTTTTCT+TGG - chr8_1:6649714-6649733 Msa1175340:CDS 40.0%
! CCTTCCAAGAAAAGCTTTTG+AGG + chr8_1:6649721-6649740 None:intergenic 40.0%
! CCTCAAAAGCTTTTCTTGGA+AGG - chr8_1:6649718-6649737 Msa1175340:CDS 40.0%
GGATCAAATCCAAAATCTCC+TGG + chr8_1:6649879-6649898 None:intergenic 40.0%
CATGTATTTAGAGACAACGG+TGG - chr8_1:6650413-6650432 Msa1175340:CDS 40.0%
!!! GGTGGTCTTATTTTCCTTGT+TGG - chr8_1:6650431-6650450 Msa1175340:CDS 40.0%
ACATTCCATTTCAGACTCTC+TGG + chr8_1:6650515-6650534 None:intergenic 40.0%
CCGATCTTTGTTAGGAATTC+TGG + chr8_1:6650596-6650615 None:intergenic 40.0%
TCAAGATGCCGATCTTTGTT+AGG + chr8_1:6650604-6650623 None:intergenic 40.0%
! TTGAGCTCATTTTCATCGGT+TGG - chr8_1:6650690-6650709 Msa1175340:intron 40.0%
!! TGAGCTCATTTTCATCGGTT+GGG - chr8_1:6650691-6650710 Msa1175340:intron 40.0%
!! TTTGGTTTGATCCACTTGGT+TGG - chr8_1:6650822-6650841 Msa1175340:intron 40.0%
! TTGGTTTGATCCACTTGGTT+GGG - chr8_1:6650823-6650842 Msa1175340:intron 40.0%
GCTTAAGGAGTTGAGAACAA+AGG - chr8_1:6650865-6650884 Msa1175340:intron 40.0%
AGAAATGGCAACAGCTGCAA+TGG + chr8_1:6649298-6649317 None:intergenic 45.0%
AGAGACTTGCCTTGGAGAAA+TGG + chr8_1:6649313-6649332 None:intergenic 45.0%
GTGTTTGTAGAGACTTGCCT+TGG + chr8_1:6649321-6649340 None:intergenic 45.0%
GCATGCAGTTCTCAGAAGAA+TGG - chr8_1:6649681-6649700 Msa1175340:CDS 45.0%
TCAGAAGAATGGATCACCCA+TGG - chr8_1:6649692-6649711 Msa1175340:CDS 45.0%
CAGAAGAATGGATCACCCAT+GGG - chr8_1:6649693-6649712 Msa1175340:CDS 45.0%
GTGGTAGATCTCACTCTAAC+TGG + chr8_1:6649774-6649793 None:intergenic 45.0%
GGTCAGTTGTATTCCCAACA+AGG + chr8_1:6650448-6650467 None:intergenic 45.0%
CTGATCCAGAGAGTCTGAAA+TGG - chr8_1:6650507-6650526 Msa1175340:CDS 45.0%
GCATCTTGAACACACCTTCA+TGG - chr8_1:6650615-6650634 Msa1175340:intron 45.0%
! CTCAACTATGAAGAGTGTGG+TGG + chr8_1:6650675-6650694 None:intergenic 45.0%
GAGCTCAACTATGAAGAGTG+TGG + chr8_1:6650678-6650697 None:intergenic 45.0%
TGTTGACACAACCTGGATTG+AGG + chr8_1:6650742-6650761 None:intergenic 45.0%
!! GCTTGTTGTTGGGGAAGATA+GGG + chr8_1:6650769-6650788 None:intergenic 45.0%
!! AGCTTGTTGTTGGGGAAGAT+AGG + chr8_1:6650770-6650789 None:intergenic 45.0%
!! TTCCTGTGAGCTTGTTGTTG+GGG + chr8_1:6650778-6650797 None:intergenic 45.0%
!! GTTCCTGTGAGCTTGTTGTT+GGG + chr8_1:6650779-6650798 None:intergenic 45.0%
!! AGTTCCTGTGAGCTTGTTGT+TGG + chr8_1:6650780-6650799 None:intergenic 45.0%
AAGCTCACAGGAACTGATGT+AGG - chr8_1:6650785-6650804 Msa1175340:intron 45.0%
AGCTCACAGGAACTGATGTA+GGG - chr8_1:6650786-6650805 Msa1175340:intron 45.0%
GATCAAACCAAAGTCCACCA+GGG + chr8_1:6650814-6650833 None:intergenic 45.0%
!! GGACTTTGGTTTGATCCACT+TGG - chr8_1:6650818-6650837 Msa1175340:intron 45.0%
TGGTTTGATCCACTTGGTTG+GGG - chr8_1:6650824-6650843 Msa1175340:intron 45.0%
TGGTTCTCCTCAGAAGCTTA+AGG - chr8_1:6650850-6650869 Msa1175340:intron 45.0%
CTCAACTCCTTAAGCTTCTG+AGG + chr8_1:6650860-6650879 None:intergenic 45.0%
! GAATGGGAGATTGGCTATGT+TGG - chr8_1:6650895-6650914 Msa1175340:intron 45.0%
! ATTGGCTATGTTGGCTGTGA+TGG - chr8_1:6650904-6650923 Msa1175340:intron 45.0%
! TTGGCTATGTTGGCTGTGAT+GGG - chr8_1:6650905-6650924 Msa1175340:intron 45.0%
TGGTTCCAGCACATTTACAC+TGG - chr8_1:6650932-6650951 Msa1175340:intron 45.0%
GCGAAAATAGTAGCATGACC+AGG + chr8_1:6650998-6651017 None:intergenic 45.0%
AGAAATGGCAACAGCTGCAA+TGG + chr8_1:6649298-6649317 None:intergenic 45.0%
AGAGACTTGCCTTGGAGAAA+TGG + chr8_1:6649313-6649332 None:intergenic 45.0%
GTGTTTGTAGAGACTTGCCT+TGG + chr8_1:6649321-6649340 None:intergenic 45.0%
GCATGCAGTTCTCAGAAGAA+TGG - chr8_1:6649681-6649700 Msa1175340:CDS 45.0%
TCAGAAGAATGGATCACCCA+TGG - chr8_1:6649692-6649711 Msa1175340:CDS 45.0%
CAGAAGAATGGATCACCCAT+GGG - chr8_1:6649693-6649712 Msa1175340:CDS 45.0%
GTGGTAGATCTCACTCTAAC+TGG + chr8_1:6649774-6649793 None:intergenic 45.0%
GGTCAGTTGTATTCCCAACA+AGG + chr8_1:6650448-6650467 None:intergenic 45.0%
CTGATCCAGAGAGTCTGAAA+TGG - chr8_1:6650507-6650526 Msa1175340:CDS 45.0%
GCATCTTGAACACACCTTCA+TGG - chr8_1:6650615-6650634 Msa1175340:intron 45.0%
! CTCAACTATGAAGAGTGTGG+TGG + chr8_1:6650675-6650694 None:intergenic 45.0%
GAGCTCAACTATGAAGAGTG+TGG + chr8_1:6650678-6650697 None:intergenic 45.0%
TGTTGACACAACCTGGATTG+AGG + chr8_1:6650742-6650761 None:intergenic 45.0%
!! GCTTGTTGTTGGGGAAGATA+GGG + chr8_1:6650769-6650788 None:intergenic 45.0%
!! AGCTTGTTGTTGGGGAAGAT+AGG + chr8_1:6650770-6650789 None:intergenic 45.0%
!! TTCCTGTGAGCTTGTTGTTG+GGG + chr8_1:6650778-6650797 None:intergenic 45.0%
!! GTTCCTGTGAGCTTGTTGTT+GGG + chr8_1:6650779-6650798 None:intergenic 45.0%
!! AGTTCCTGTGAGCTTGTTGT+TGG + chr8_1:6650780-6650799 None:intergenic 45.0%
AAGCTCACAGGAACTGATGT+AGG - chr8_1:6650785-6650804 Msa1175340:intron 45.0%
AGCTCACAGGAACTGATGTA+GGG - chr8_1:6650786-6650805 Msa1175340:intron 45.0%
GATCAAACCAAAGTCCACCA+GGG + chr8_1:6650814-6650833 None:intergenic 45.0%
!! GGACTTTGGTTTGATCCACT+TGG - chr8_1:6650818-6650837 Msa1175340:intron 45.0%
TGGTTTGATCCACTTGGTTG+GGG - chr8_1:6650824-6650843 Msa1175340:intron 45.0%
TGGTTCTCCTCAGAAGCTTA+AGG - chr8_1:6650850-6650869 Msa1175340:intron 45.0%
CTCAACTCCTTAAGCTTCTG+AGG + chr8_1:6650860-6650879 None:intergenic 45.0%
! GAATGGGAGATTGGCTATGT+TGG - chr8_1:6650895-6650914 Msa1175340:intron 45.0%
! ATTGGCTATGTTGGCTGTGA+TGG - chr8_1:6650904-6650923 Msa1175340:intron 45.0%
! TTGGCTATGTTGGCTGTGAT+GGG - chr8_1:6650905-6650924 Msa1175340:intron 45.0%
TGGTTCCAGCACATTTACAC+TGG - chr8_1:6650932-6650951 Msa1175340:intron 45.0%
GCGAAAATAGTAGCATGACC+AGG + chr8_1:6650998-6651017 None:intergenic 45.0%
! CAGCTGTTGCCATTTCTCCA+AGG - chr8_1:6649301-6649320 Msa1175340:CDS 50.0%
CTGAGCCTGATAGACCTTTG+TGG - chr8_1:6649811-6649830 Msa1175340:intron 50.0%
GGGAACCACAAAGGTCTATC+AGG + chr8_1:6649819-6649838 None:intergenic 50.0%
GATAGACCTTTGTGGTTCCC+AGG - chr8_1:6649819-6649838 Msa1175340:intron 50.0%
TTGCGCAACTGCGTCAACTT+TGG - chr8_1:6650053-6650072 Msa1175340:intron 50.0%
AGAGCTTGTGCACTGCAGAT+GGG - chr8_1:6650541-6650560 Msa1175340:CDS 50.0%
CACTGCAGATGGGCAATGTT+GGG - chr8_1:6650551-6650570 Msa1175340:CDS 50.0%
ACACCTTCATGGTACACTGC+TGG - chr8_1:6650626-6650645 Msa1175340:intron 50.0%
TCTCCAGCAGTGTACCATGA+AGG + chr8_1:6650632-6650651 None:intergenic 50.0%
!! ATTTTCATCGGTTGGGCCGA+GGG - chr8_1:6650698-6650717 Msa1175340:intron 50.0%
TTCCCCAACAACAAGCTCAC+AGG - chr8_1:6650773-6650792 Msa1175340:intron 50.0%
GGATCAAACCAAAGTCCACC+AGG + chr8_1:6650815-6650834 None:intergenic 50.0%
CAGTGCCAGTGTAAATGTGC+TGG + chr8_1:6650940-6650959 None:intergenic 50.0%
CAGCACATTTACACTGGCAC+TGG - chr8_1:6650938-6650957 Msa1175340:intron 50.0%
GATCAGCAAGGTGAGCAAAG+AGG + chr8_1:6650976-6650995 None:intergenic 50.0%
TTTGCTCACCTTGCTGATCC+TGG - chr8_1:6650977-6650996 Msa1175340:intron 50.0%
TAGCATGACCAGGATCAGCA+AGG + chr8_1:6650988-6651007 None:intergenic 50.0%
! CAGCTGTTGCCATTTCTCCA+AGG - chr8_1:6649301-6649320 Msa1175340:CDS 50.0%
CTGAGCCTGATAGACCTTTG+TGG - chr8_1:6649811-6649830 Msa1175340:intron 50.0%
GGGAACCACAAAGGTCTATC+AGG + chr8_1:6649819-6649838 None:intergenic 50.0%
GATAGACCTTTGTGGTTCCC+AGG - chr8_1:6649819-6649838 Msa1175340:intron 50.0%
TTGCGCAACTGCGTCAACTT+TGG - chr8_1:6650053-6650072 Msa1175340:intron 50.0%
AGAGCTTGTGCACTGCAGAT+GGG - chr8_1:6650541-6650560 Msa1175340:CDS 50.0%
CACTGCAGATGGGCAATGTT+GGG - chr8_1:6650551-6650570 Msa1175340:CDS 50.0%
ACACCTTCATGGTACACTGC+TGG - chr8_1:6650626-6650645 Msa1175340:intron 50.0%
TCTCCAGCAGTGTACCATGA+AGG + chr8_1:6650632-6650651 None:intergenic 50.0%
!! ATTTTCATCGGTTGGGCCGA+GGG - chr8_1:6650698-6650717 Msa1175340:intron 50.0%
TTCCCCAACAACAAGCTCAC+AGG - chr8_1:6650773-6650792 Msa1175340:intron 50.0%
GGATCAAACCAAAGTCCACC+AGG + chr8_1:6650815-6650834 None:intergenic 50.0%
CAGTGCCAGTGTAAATGTGC+TGG + chr8_1:6650940-6650959 None:intergenic 50.0%
CAGCACATTTACACTGGCAC+TGG - chr8_1:6650938-6650957 Msa1175340:intron 50.0%
GATCAGCAAGGTGAGCAAAG+AGG + chr8_1:6650976-6650995 None:intergenic 50.0%
TTTGCTCACCTTGCTGATCC+TGG - chr8_1:6650977-6650996 Msa1175340:intron 50.0%
TAGCATGACCAGGATCAGCA+AGG + chr8_1:6650988-6651007 None:intergenic 50.0%
AGCTGCTGCACACACTGTTG+TGG + chr8_1:6649793-6649812 None:intergenic 55.0%
GTGCTTCCTGGGAACCACAA+AGG + chr8_1:6649828-6649847 None:intergenic 55.0%
TGCCATCTAGCCATGGAGGA+GGG + chr8_1:6649851-6649870 None:intergenic 55.0%
AGACTGCCATCTAGCCATGG+AGG + chr8_1:6649855-6649874 None:intergenic 55.0%
! GGCAGTCTCCCAGGAGATTT+TGG - chr8_1:6649867-6649886 Msa1175340:intron 55.0%
CAGAGCTTGTGCACTGCAGA+TGG - chr8_1:6650540-6650559 Msa1175340:CDS 55.0%
GCACTGCAGATGGGCAATGT+TGG - chr8_1:6650550-6650569 Msa1175340:CDS 55.0%
!! CATTTTCATCGGTTGGGCCG+AGG - chr8_1:6650697-6650716 Msa1175340:intron 55.0%
TGGGCTGACATCCTCAATCC+AGG - chr8_1:6650728-6650747 Msa1175340:intron 55.0%
!! GGGTCAGTGTTGACACAACC+TGG + chr8_1:6650749-6650768 None:intergenic 55.0%
! GGAACTGATGTAGGGTACCC+TGG - chr8_1:6650794-6650813 Msa1175340:intron 55.0%
! ACTGATGTAGGGTACCCTGG+TGG - chr8_1:6650797-6650816 Msa1175340:intron 55.0%
!! TAGGGTACCCTGGTGGACTT+TGG - chr8_1:6650804-6650823 Msa1175340:intron 55.0%
GATCCACTTGGTTGGGGAAG+TGG - chr8_1:6650830-6650849 Msa1175340:intron 55.0%
GAACCACTTCCCCAACCAAG+TGG + chr8_1:6650836-6650855 None:intergenic 55.0%
! TGTTGGCTGTGATGGGAGCT+TGG - chr8_1:6650912-6650931 Msa1175340:intron 55.0%
AGCTGCTGCACACACTGTTG+TGG + chr8_1:6649793-6649812 None:intergenic 55.0%
GTGCTTCCTGGGAACCACAA+AGG + chr8_1:6649828-6649847 None:intergenic 55.0%
TGCCATCTAGCCATGGAGGA+GGG + chr8_1:6649851-6649870 None:intergenic 55.0%
AGACTGCCATCTAGCCATGG+AGG + chr8_1:6649855-6649874 None:intergenic 55.0%
! GGCAGTCTCCCAGGAGATTT+TGG - chr8_1:6649867-6649886 Msa1175340:intron 55.0%
CAGAGCTTGTGCACTGCAGA+TGG - chr8_1:6650540-6650559 Msa1175340:CDS 55.0%
GCACTGCAGATGGGCAATGT+TGG - chr8_1:6650550-6650569 Msa1175340:CDS 55.0%
!! CATTTTCATCGGTTGGGCCG+AGG - chr8_1:6650697-6650716 Msa1175340:intron 55.0%
TGGGCTGACATCCTCAATCC+AGG - chr8_1:6650728-6650747 Msa1175340:intron 55.0%
!! GGGTCAGTGTTGACACAACC+TGG + chr8_1:6650749-6650768 None:intergenic 55.0%
! GGAACTGATGTAGGGTACCC+TGG - chr8_1:6650794-6650813 Msa1175340:intron 55.0%
! ACTGATGTAGGGTACCCTGG+TGG - chr8_1:6650797-6650816 Msa1175340:intron 55.0%
!! TAGGGTACCCTGGTGGACTT+TGG - chr8_1:6650804-6650823 Msa1175340:intron 55.0%
GATCCACTTGGTTGGGGAAG+TGG - chr8_1:6650830-6650849 Msa1175340:intron 55.0%
GAACCACTTCCCCAACCAAG+TGG + chr8_1:6650836-6650855 None:intergenic 55.0%
! TGTTGGCTGTGATGGGAGCT+TGG - chr8_1:6650912-6650931 Msa1175340:intron 55.0%
!! ATGGAGGAGGGGTGCTTCCT+GGG + chr8_1:6649839-6649858 None:intergenic 60.0%
ACCCCTCCTCCATGGCTAGA+TGG - chr8_1:6649846-6649865 Msa1175340:intron 60.0%
GCCATCTAGCCATGGAGGAG+GGG + chr8_1:6649850-6649869 None:intergenic 60.0%
CTGCCATCTAGCCATGGAGG+AGG + chr8_1:6649852-6649871 None:intergenic 60.0%
GGGAGACTGCCATCTAGCCA+TGG + chr8_1:6649858-6649877 None:intergenic 60.0%
TGGCTAGATGGCAGTCTCCC+AGG - chr8_1:6649858-6649877 Msa1175340:intron 60.0%
TGGGCAATGTTGGGAGCAGC+AGG - chr8_1:6650560-6650579 Msa1175340:CDS 60.0%
TTGGGCCGAGGGTAGAAGGT+GGG - chr8_1:6650709-6650728 Msa1175340:intron 60.0%
GTCAGCCCACCTTCTACCCT+CGG + chr8_1:6650717-6650736 None:intergenic 60.0%
!! ATGGAGGAGGGGTGCTTCCT+GGG + chr8_1:6649839-6649858 None:intergenic 60.0%
ACCCCTCCTCCATGGCTAGA+TGG - chr8_1:6649846-6649865 Msa1175340:intron 60.0%
GCCATCTAGCCATGGAGGAG+GGG + chr8_1:6649850-6649869 None:intergenic 60.0%
CTGCCATCTAGCCATGGAGG+AGG + chr8_1:6649852-6649871 None:intergenic 60.0%
GGGAGACTGCCATCTAGCCA+TGG + chr8_1:6649858-6649877 None:intergenic 60.0%
TGGCTAGATGGCAGTCTCCC+AGG - chr8_1:6649858-6649877 Msa1175340:intron 60.0%
TGGGCAATGTTGGGAGCAGC+AGG - chr8_1:6650560-6650579 Msa1175340:CDS 60.0%
TTGGGCCGAGGGTAGAAGGT+GGG - chr8_1:6650709-6650728 Msa1175340:intron 60.0%
GTCAGCCCACCTTCTACCCT+CGG + chr8_1:6650717-6650736 None:intergenic 60.0%
!! CATGGAGGAGGGGTGCTTCC+TGG + chr8_1:6649840-6649859 None:intergenic 65.0%
!! CAGGAAGCACCCCTCCTCCA+TGG - chr8_1:6649838-6649857 Msa1175340:intron 65.0%
TCGGTTGGGCCGAGGGTAGA+AGG - chr8_1:6650705-6650724 Msa1175340:intron 65.0%
GTTGGGCCGAGGGTAGAAGG+TGG - chr8_1:6650708-6650727 Msa1175340:intron 65.0%
!! CATGGAGGAGGGGTGCTTCC+TGG + chr8_1:6649840-6649859 None:intergenic 65.0%
!! CAGGAAGCACCCCTCCTCCA+TGG - chr8_1:6649838-6649857 Msa1175340:intron 65.0%
TCGGTTGGGCCGAGGGTAGA+AGG - chr8_1:6650705-6650724 Msa1175340:intron 65.0%
GTTGGGCCGAGGGTAGAAGG+TGG - chr8_1:6650708-6650727 Msa1175340:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 6649270 6651042 6649270 ID=Msa1175340;Name=Msa1175340
chr8_1 mRNA 6649270 6651042 6649270 ID=Msa1175340-mRNA-1;Parent=Msa1175340;Name=Msa1175340-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.5|0|1|1|1|3|0|270
chr8_1 exon 6650990 6651042 6650990 ID=Msa1175340-mRNA-1:exon:2383;Parent=Msa1175340-mRNA-1
chr8_1 exon 6650403 6650623 6650403 ID=Msa1175340-mRNA-1:exon:2382;Parent=Msa1175340-mRNA-1
chr8_1 exon 6649270 6649808 6649270 ID=Msa1175340-mRNA-1:exon:2381;Parent=Msa1175340-mRNA-1
chr8_1 CDS 6650990 6651042 6650990 ID=Msa1175340-mRNA-1:cds;Parent=Msa1175340-mRNA-1
chr8_1 CDS 6650403 6650623 6650403 ID=Msa1175340-mRNA-1:cds;Parent=Msa1175340-mRNA-1
chr8_1 CDS 6649270 6649808 6649270 ID=Msa1175340-mRNA-1:cds;Parent=Msa1175340-mRNA-1
Gene Sequence

>Msa1175340

ATGGCTTCTGCTTGTGCTTCTTCTGCCATTGCAGCTGTTGCCATTTCTCCAAGTTCTCAGAAGAATGGATCACCCATGGGAACCTCAAAAGCTTTTCTTGGAAGGAAATTGAAGGTGAACAGCAACACTGCAGCACCAGTTAGAGTGAGATCTACCACAACAGTGTGTGCAGCAGCTGAGCCTGATAGACCTTTGTGGTTCCCAGGAAGCACCCCTCCTCCATGGCTAGATGGCAGTCTCCCAGGAGATTTTGGATTTGATCCTCTTGGACTTTCATCTGATCCAGAGAGTCTGAAATGGAATGTTCAAGCAGAGCTTGTGCACTGCAGATGGGCAATGTTGGGAGCAGCAGGAATTTTCATCCCAGAATTCCTAACAAAGATCGGCATCTTGAACACACCTTCATGGTACACTGCTGGAGAGCAAGAGTATTTCACAGACACCACCACACTCTTCATAGTTGAGCTCATTTTCATCGGTTGGGCCGAGGGTAGAAGGTGGGCTGACATCCTCAATCCAGGTTGTGTCAACACTGACCCTATCTTCCCCAACAACAAGCTCACAGGAACTGATGTAGGGTACCCTGGTGGACTTTGGTTTGATCCACTTGGTTGGGGAAGTGGTTCTCCTCAGAAGCTTAAGGAGTTGAGAACAAAGGAAATTAAGAATGGGAGATTGGCTATGTTGGCTGTGATGGGAGCTTGGTTCCAGCACATTTACACTGGCACTGGTCCTATTGATAACCTCTTTGCTCACCTTGCTGATCCTGGTCATGCTACTATTTTCGCTGTAAGTTCCATCAATACCTCCTAG

Protein sequence

>Msa1175340

MASACASSAIAAVAISPSSQKNGSPMGTSKAFLGRKLKVNSNTAAPVRVRSTTTVCAAAEPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLSSDPESLKWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAVSSINTS*