AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0615460


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615460 MtrunA17_Chr4g0051951 90.196 204 13 1 11 207 23 226 2.17e-127 358
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 181 sgRNAs with CRISPR-Local

Find 433 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGTTCTTGGCGAATGTCTC+TGG 0.172290 4_2:-64945545 None:intergenic
CATAATGACCATTCACTTTC+CGG 0.213438 4_2:-64946071 None:intergenic
TCCTGAGGAGGCTACTTTCT+TGG 0.215971 4_2:-64945399 None:intergenic
GAAACATAAAGCTGGGAATA+TGG 0.234759 4_2:-64946200 None:intergenic
TTTAAAAGGATAAGAGTAAA+TGG 0.256292 4_2:+64947373 Msa0615460:three_prime_UTR
ACCTTGCAGCTCCCAATTCT+TGG 0.262027 4_2:-64945352 None:intergenic
CTCAGAGCATTCTTGCCATC+TGG 0.267634 4_2:+64945744 Msa0615460:five_prime_UTR
GTGGGCTATGTTGGGAGCCT+TGG 0.274776 4_2:+64945592 Msa0615460:five_prime_UTR
AGTTATGATGCTTCATTTAC+TGG 0.278117 4_2:-64947150 None:intergenic
GACTTCAAGTTCACGGTTCT+TGG 0.287728 4_2:-64945558 None:intergenic
GAAGGGTTAATGAAGCTATT+AGG 0.307604 4_2:+64946840 Msa0615460:CDS
CTCTGAGCATGGACCAAACT+TGG 0.318566 4_2:-64945728 None:intergenic
GTTCTCCAAAGGTCCCTTTC+CGG 0.323199 4_2:-64945984 None:intergenic
AATAAAACAAGAAAGTTAAA+TGG 0.323534 4_2:-64947203 None:intergenic
AACCCCTTCAAGCCAAGAAT+TGG 0.330885 4_2:+64945340 Msa0615460:five_prime_UTR
TTCAACTCTGCGAAAGCCTC+TGG 0.342564 4_2:-64945890 None:intergenic
CCTAAGTACTTAACACGGTC+TGG 0.354037 4_2:-64945437 None:intergenic
GCTCCCAATTCTTGGCTTGA+AGG 0.367955 4_2:-64945344 None:intergenic
CTTGAAGGGGTTAGCTTGAC+TGG 0.368606 4_2:-64945329 None:intergenic
TGGGCTATGTTGGGAGCCTT+GGG 0.369590 4_2:+64945593 Msa0615460:five_prime_UTR
CTACTTGGGTAACCCAAGTT+TGG 0.372382 4_2:+64945715 Msa0615460:five_prime_UTR
TGATTTGATTAGTTCAGTTT+TGG 0.374128 4_2:-64946240 None:intergenic
TAATTTGAGAAGGGTGTTGA+TGG 0.374681 4_2:-64946773 None:intergenic
GTCCACCCTCGCTAAAGATC+TGG 0.379439 4_2:-64945688 None:intergenic
TTTCTTGTGTGGGGCATGTT+TGG 0.382380 4_2:-64946698 None:intergenic
GGAGGCAGCTTTGACCCATT+GGG 0.385139 4_2:+64945854 Msa0615460:five_prime_UTR
GCCCATGCGTTGTTGTTGAC+TGG 0.388666 4_2:-64946028 None:intergenic
TATGTTCGGATTCTTTGTTC+AGG 0.392718 4_2:+64945952 Msa0615460:five_prime_UTR
CTCTCTTCACCAACCTTGGC+TGG 0.392734 4_2:+64945302 Msa0615460:five_prime_UTR
CGAGGGTGGACTTGACTACT+TGG 0.394014 4_2:+64945700 Msa0615460:five_prime_UTR
CCATAGCAGGTGGGCTATGT+TGG 0.398243 4_2:+64945583 Msa0615460:five_prime_UTR
TCTCGCAATGGTGTTAAATT+CGG 0.399582 4_2:+64945638 Msa0615460:five_prime_UTR
TATGCCACCAACTTTGTTCC+CGG 0.408282 4_2:+64946052 Msa0615460:five_prime_UTR
GTTGAAGGTTACCGTATTGC+TGG 0.411128 4_2:+64945794 Msa0615460:five_prime_UTR
AGGAGGCAGCTTTGACCCAT+TGG 0.412272 4_2:+64945853 Msa0615460:five_prime_UTR
TTAGCCATGTTCTCTATGTT+CGG 0.413048 4_2:+64945938 Msa0615460:five_prime_UTR
CTCCCAATTCTTGGCTTGAA+GGG 0.413150 4_2:-64945343 None:intergenic
AGGATAAGAGTAAATGGTTA+TGG 0.416085 4_2:+64947379 Msa0615460:three_prime_UTR
ATAATGACCATTCACTTTCC+GGG 0.417015 4_2:-64946070 None:intergenic
TTTCGCAGAGTTGAAGGTTA+AGG 0.417491 4_2:+64945898 Msa0615460:five_prime_UTR
TCCCTCCACACCAACAATCT+TGG 0.419284 4_2:-64946928 None:intergenic
ATGTAACTTTGGTTAATTCA+AGG 0.419868 4_2:-64947434 None:intergenic
ACACGGTCTGGGCCGTACCA+TGG 0.426815 4_2:-64945425 None:intergenic
GAAGATGTTGATGAAATTGA+AGG 0.428153 4_2:+64946822 Msa0615460:CDS
GAAGAAAGAGCCATTGAGAT+TGG 0.430900 4_2:+64947019 Msa0615460:CDS
CAGGCTATTGTGACCGGAAA+GGG 0.431695 4_2:+64945971 Msa0615460:five_prime_UTR
CGTATTGCTGGTGGACCTCT+TGG 0.432323 4_2:+64945806 Msa0615460:five_prime_UTR
GGCTCTCTCTTCACCAACCT+TGG 0.434383 4_2:+64945298 Msa0615460:five_prime_UTR
AATGGGTCAAAGCTGCCTCC+TGG 0.443349 4_2:-64945851 None:intergenic
TGTGACCGGAAAGGGACCTT+TGG 0.445095 4_2:+64945979 Msa0615460:five_prime_UTR
AACACCTCTTTCTTACACTT+TGG 0.446806 4_2:-64946951 None:intergenic
CTTTGTTCCCGGAAAGTGAA+TGG 0.448371 4_2:+64946063 Msa0615460:five_prime_UTR
GGCCACTCAAGTTATCTTGA+TGG 0.448718 4_2:+64945766 Msa0615460:five_prime_UTR
TCCAAGATTGTTGGTGTGGA+GGG 0.448816 4_2:+64946927 Msa0615460:CDS
TCAGAGCATTCTTGCCATCT+GGG 0.457297 4_2:+64945745 Msa0615460:five_prime_UTR
CACGGTCTGGGCCGTACCAT+GGG 0.459595 4_2:-64945424 None:intergenic
TTAAATTCGGTGAGGCTGTA+TGG 0.460132 4_2:+64945651 Msa0615460:five_prime_UTR
CATAGCAGGTGGGCTATGTT+GGG 0.463478 4_2:+64945584 Msa0615460:five_prime_UTR
AGAGGCTTTCGCAGAGTTGA+AGG 0.464620 4_2:+64945892 Msa0615460:five_prime_UTR
AAACATAAAGCTGGGAATAT+GGG 0.468433 4_2:-64946199 None:intergenic
ACCCCTTCAAGCCAAGAATT+GGG 0.469174 4_2:+64945341 Msa0615460:five_prime_UTR
ATCTTGATGGGAGCCGTTGA+AGG 0.469661 4_2:+64945779 Msa0615460:five_prime_UTR
AGAAATTCTTGAATAGTTGA+AGG 0.470143 4_2:-64947113 None:intergenic
CCAACATAGCCCACCTGCTA+TGG 0.470589 4_2:-64945583 None:intergenic
CCATTGCGAGACAAAAGCTC+TGG 0.476957 4_2:-64945626 None:intergenic
GATTATACGAAACATAAAGC+TGG 0.480286 4_2:-64946208 None:intergenic
GTGTCCCATCCGTAGTCACC+TGG 0.480375 4_2:-64945503 None:intergenic
CAATTCCTCTCAGTTTCTCA+AGG 0.481597 4_2:+64946738 Msa0615460:CDS
TTATGTAACGTTCTTCCTGC+GGG 0.482076 4_2:+64946101 Msa0615460:five_prime_UTR
GGTCGTCAGCTAGGCCCAAT+GGG 0.483278 4_2:-64945868 None:intergenic
CGGTGAGGCTGTATGGTTCA+AGG 0.483338 4_2:+64945658 Msa0615460:five_prime_UTR
CTTGACTGGCTTGCCAGCCA+AGG 0.485508 4_2:-64945315 None:intergenic
AAGTACTTAGGCCCATTCTC+TGG 0.486720 4_2:+64945449 Msa0615460:five_prime_UTR
TTTGTTCAGGCTATTGTGAC+CGG 0.488454 4_2:+64945965 Msa0615460:five_prime_UTR
AAGCCTCTGGGTCGTCAGCT+AGG 0.492481 4_2:-64945877 None:intergenic
GGGTCGTCAGCTAGGCCCAA+TGG 0.492858 4_2:-64945869 None:intergenic
CCCATGCGTTGTTGTTGACT+GGG 0.493524 4_2:-64946027 None:intergenic
TCTTCTTGAGTTTCATCTGA+AGG 0.495051 4_2:-64946801 None:intergenic
AAAGAGGTGTTGAGGTTGGA+TGG 0.502745 4_2:+64946963 Msa0615460:CDS
GATAAATGTACTCGTATGAA+TGG 0.503447 4_2:-64945223 None:intergenic
CCAGACCGTGTTAAGTACTT+AGG 0.508216 4_2:+64945437 Msa0615460:five_prime_UTR
ACCCAGTCAACAACAACGCA+TGG 0.509579 4_2:+64946026 Msa0615460:five_prime_UTR
ACTGGCTTGCCAGCCAAGGT+TGG 0.509911 4_2:-64945311 None:intergenic
TGAGGAGGCTACTTTCTTGG+TGG 0.512202 4_2:-64945396 None:intergenic
AGGTGTTGAGGTTGGATGGG+TGG 0.512579 4_2:+64946967 Msa0615460:CDS
TCCACCCTCGCTAAAGATCT+GGG 0.513274 4_2:-64945687 None:intergenic
GGGAACAAAGTTGGTGGCAT+AGG 0.515086 4_2:-64946050 None:intergenic
GAAGGAGTAGTAATTTGAGA+AGG 0.515242 4_2:-64946783 None:intergenic
ATGTTTGGTTGCAACTTTGT+TGG 0.516879 4_2:-64946683 None:intergenic
TCACTTTCCGGGAACAAAGT+TGG 0.517061 4_2:-64946059 None:intergenic
TAAGAAAGAGGTGTTGAGGT+TGG 0.519109 4_2:+64946959 Msa0615460:CDS
ATGGGTCAAAGCTGCCTCCT+GGG 0.519919 4_2:-64945850 None:intergenic
TTATTCCAAGATTGTTGGTG+TGG 0.522131 4_2:+64946923 Msa0615460:CDS
ATTCTTCTCATCGTTAAGAC+AGG 0.522375 4_2:+64946458 Msa0615460:CDS
AAGCTGCCTCCTGGGTAAAG+TGG 0.523139 4_2:-64945842 None:intergenic
AGCTGCCTCCTGGGTAAAGT+GGG 0.524528 4_2:-64945841 None:intergenic
ACTCTCCAGTCAAGTAAGAC+GGG 0.525262 4_2:-64945478 None:intergenic
GGTTCTTGGCGAATGTCTCT+GGG 0.525535 4_2:-64945544 None:intergenic
TTTGGTTAATTCAAGGACTA+CGG 0.526494 4_2:-64947427 None:intergenic
AGTAAATGTGCCAATCTCAA+TGG 0.526681 4_2:-64947029 None:intergenic
TATGGATGACTTCAAGTTCA+CGG 0.526961 4_2:-64945565 None:intergenic
CTCGCTAAAGATCTGGGATC+CGG 0.527239 4_2:-64945681 None:intergenic
GTACCATGGGCTTCCTGAGG+AGG 0.529428 4_2:-64945411 None:intergenic
ATTCTTGTCATTGTGAAGGT+GGG 0.532724 4_2:+64946898 Msa0615460:CDS
GAATGTGAAGACATTGAGAA+TGG 0.533214 4_2:-64946432 None:intergenic
TCCTCAGGAAGCCCATGGTA+CGG 0.534699 4_2:+64945413 Msa0615460:five_prime_UTR
CAACTTTGTTGGAGGAACAA+AGG 0.534985 4_2:-64946672 None:intergenic
CTTTCCGGGAACAAAGTTGG+TGG 0.536757 4_2:-64946056 None:intergenic
TCCCAGATCTTTAGCGAGGG+TGG 0.536796 4_2:+64945686 Msa0615460:five_prime_UTR
TTCCAAGATTGTTGGTGTGG+AGG 0.537144 4_2:+64946926 Msa0615460:CDS
ACCAAGAAAGTAGCCTCCTC+AGG 0.538963 4_2:+64945398 Msa0615460:five_prime_UTR
GAAATTCTTGAATAGTTGAA+GGG 0.543216 4_2:-64947112 None:intergenic
AAGGAGTAGTAATTTGAGAA+GGG 0.551612 4_2:-64946782 None:intergenic
GCCACTCAAGTTATCTTGAT+GGG 0.551888 4_2:+64945767 Msa0615460:five_prime_UTR
TCAACTCTGCGAAAGCCTCT+GGG 0.551997 4_2:-64945889 None:intergenic
GATTCTTGTCATTGTGAAGG+TGG 0.552344 4_2:+64946897 Msa0615460:CDS
GAAACTGAGAGGAATTGTTG+AGG 0.552779 4_2:-64946732 None:intergenic
GTTATGATGCTTCATTTACT+GGG 0.554250 4_2:-64947149 None:intergenic
GGAGAGTTCCCAGGTGACTA+CGG 0.554538 4_2:+64945494 Msa0615460:five_prime_UTR
CAAGAGGTCCACCAGCAATA+CGG 0.554867 4_2:-64945805 None:intergenic
TGTGATTCTTGTCATTGTGA+AGG 0.555631 4_2:+64946894 Msa0615460:CDS
AAGAGGTGTTGAGGTTGGAT+GGG 0.556030 4_2:+64946964 Msa0615460:CDS
AACAATGGCCGCATCATCCA+TGG 0.557317 4_2:+64945277 Msa0615460:five_prime_UTR
TACTTGACTGGAGAGTTCCC+AGG 0.557425 4_2:+64945485 Msa0615460:five_prime_UTR
CTCTGGGAAAACACATCCCA+AGG 0.558618 4_2:-64945609 None:intergenic
AACTTGAAGTCATCCATAGC+AGG 0.560347 4_2:+64945570 Msa0615460:five_prime_UTR
TGGCAAGAATGCTCTGAGCA+TGG 0.562020 4_2:-64945739 None:intergenic
AATTTGAGAAGGGTGTTGAT+GGG 0.562467 4_2:-64946772 None:intergenic
AGTTCCCAGGTGACTACGGA+TGG 0.562952 4_2:+64945498 Msa0615460:five_prime_UTR
AACTCTCCAGTCAAGTAAGA+CGG 0.563156 4_2:-64945479 None:intergenic
TTTGGTTGCAACTTTGTTGG+AGG 0.567030 4_2:-64946680 None:intergenic
GACTACGGATGGGACACTGC+TGG 0.567506 4_2:+64945509 Msa0615460:five_prime_UTR
TCCCAATTCTTGGCTTGAAG+GGG 0.567590 4_2:-64945342 None:intergenic
ATTATACGAAACATAAAGCT+GGG 0.568549 4_2:-64946207 None:intergenic
AGCAATACGGTAACCTTCAA+CGG 0.570535 4_2:-64945792 None:intergenic
GAAGGTTACCGTATTGCTGG+TGG 0.574077 4_2:+64945797 Msa0615460:five_prime_UTR
CTAAGTACTTAACACGGTCT+GGG 0.575188 4_2:-64945436 None:intergenic
AAGATGTTGATGAAATTGAA+GGG 0.576077 4_2:+64946823 Msa0615460:CDS
GATAACTTGAGTGGCCCAGA+TGG 0.578481 4_2:-64945759 None:intergenic
TCAGGCTATTGTGACCGGAA+AGG 0.579894 4_2:+64945970 Msa0615460:five_prime_UTR
GTTATGTAACGTTCTTCCTG+CGG 0.590197 4_2:+64946100 Msa0615460:five_prime_UTR
GGGACCAAAGTGTAAGAAAG+AGG 0.597258 4_2:+64946947 Msa0615460:CDS
TCTGAGCATGGACCAAACTT+GGG 0.597282 4_2:-64945727 None:intergenic
CTCTCCAGTCAAGTAAGACG+GGG 0.600570 4_2:-64945477 None:intergenic
TTGAAGTCATCCATAGCAGG+TGG 0.604782 4_2:+64945573 Msa0615460:five_prime_UTR
GGTGGTAGCAGACTTCCTCA+TGG 0.606241 4_2:-64945378 None:intergenic
GCCGTACCATGGGCTTCCTG+AGG 0.606264 4_2:-64945414 None:intergenic
GAATCCGAACATAGAGAACA+TGG 0.607900 4_2:-64945942 None:intergenic
GAGGCTGTATGGTTCAAGGC+CGG 0.609667 4_2:+64945662 Msa0615460:five_prime_UTR
TCCCATCAAGATAACTTGAG+TGG 0.611094 4_2:-64945768 None:intergenic
ATAATAATTCACATTCCCGC+AGG 0.616824 4_2:-64946116 None:intergenic
CCCAGTCAACAACAACGCAT+GGG 0.621736 4_2:+64946027 Msa0615460:five_prime_UTR
GTTGTTGACCCACTTTACCC+AGG 0.622018 4_2:+64945833 Msa0615460:five_prime_UTR
ACTGAGAGGAATTGTTGAGG+AGG 0.623203 4_2:-64946729 None:intergenic
CATTGCGAGACAAAAGCTCT+GGG 0.627524 4_2:-64945625 None:intergenic
GGTTGGTGAAGAGAGAGCCA+TGG 0.635995 4_2:-64945294 None:intergenic
TGTCCCATCCGTAGTCACCT+GGG 0.637071 4_2:-64945502 None:intergenic
CGGATCCCAGATCTTTAGCG+AGG 0.637974 4_2:+64945682 Msa0615460:five_prime_UTR
TTTGAGGGTGATGAGGATGG+TGG 0.639830 4_2:+64946867 Msa0615460:CDS
GCCAAGAATTGGGAGCTGCA+AGG 0.640361 4_2:+64945351 Msa0615460:five_prime_UTR
AGAGAGAGCCATGGATGATG+CGG 0.641541 4_2:-64945285 None:intergenic
AAGGTTAAGGAACTCAAGAA+CGG 0.647483 4_2:+64945911 Msa0615460:five_prime_UTR
TAGCCTCCTCAGGAAGCCCA+TGG 0.650998 4_2:+64945408 Msa0615460:five_prime_UTR
GGATCCCAGATCTTTAGCGA+GGG 0.652580 4_2:+64945683 Msa0615460:five_prime_UTR
ATGATGCTTCATTTACTGGG+AGG 0.654364 4_2:-64947146 None:intergenic
GTTCCCAGGTGACTACGGAT+GGG 0.662262 4_2:+64945499 Msa0615460:five_prime_UTR
TGATCAGCAAGGTTCTCCAA+AGG 0.663337 4_2:-64945995 None:intergenic
TGAATCCTTGAGAAACTGAG+AGG 0.670478 4_2:-64946743 None:intergenic
TGAAGTCATCCATAGCAGGT+GGG 0.676313 4_2:+64945574 Msa0615460:five_prime_UTR
GAGGGTGGACTTGACTACTT+GGG 0.679046 4_2:+64945701 Msa0615460:five_prime_UTR
GAGCTGCAAGGTTCACCATG+AGG 0.681403 4_2:+64945363 Msa0615460:five_prime_UTR
CCAATAAAATAAATACTGTG+TGG 0.682477 4_2:-64947291 None:intergenic
GGGTCAACAACTTCACCAAG+AGG 0.690756 4_2:-64945821 None:intergenic
GGGCCTAGCTGACGACCCAG+AGG 0.694133 4_2:+64945874 Msa0615460:five_prime_UTR
ATGTTGAAGTAACTCTAATG+TGG 0.697191 4_2:-64946390 None:intergenic
AGTGTAAGAAAGAGGTGTTG+AGG 0.697806 4_2:+64946955 Msa0615460:CDS
CAATGGTGTTAAATTCGGTG+AGG 0.700535 4_2:+64945643 Msa0615460:five_prime_UTR
GGTCAGCAAGATGATCAGCA+AGG 0.704980 4_2:-64946006 None:intergenic
GTTGACCCACTTTACCCAGG+AGG 0.722844 4_2:+64945836 Msa0615460:five_prime_UTR
TCTCCAGTCAAGTAAGACGG+GGG 0.735891 4_2:-64945476 None:intergenic
ATGGGCCTAAGTACTTAACA+CGG 0.752177 4_2:-64945442 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTGTACCT+AGG + chr4_2:64946554-64946573 Msa0615460:intron 15.0%
!! AATAAAACAAGAAAGTTAAA+TGG - chr4_2:64947206-64947225 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTGTACCT+AGG + chr4_2:64946554-64946573 Msa0615460:intron 15.0%
!! AATAAAACAAGAAAGTTAAA+TGG - chr4_2:64947206-64947225 None:intergenic 15.0%
!!! TTTTAATTTCATTGCAACAA+TGG + chr4_2:64945262-64945281 Msa0615460:five_prime_UTR 20.0%
!!! ATTAAGCATTTTTTGAATGA+TGG + chr4_2:64946990-64947009 Msa0615460:CDS 20.0%
!!! TTAAGCATTTTTTGAATGAT+GGG + chr4_2:64946991-64947010 Msa0615460:CDS 20.0%
!!! TTGAGATCTTTCATTTTAAA+AGG + chr4_2:64947359-64947378 Msa0615460:three_prime_UTR 20.0%
!! TTTAAAAGGATAAGAGTAAA+TGG + chr4_2:64947373-64947392 Msa0615460:three_prime_UTR 20.0%
!!! TTTTAATTTCATTGCAACAA+TGG + chr4_2:64945262-64945281 Msa0615460:five_prime_UTR 20.0%
!!! ATTAAGCATTTTTTGAATGA+TGG + chr4_2:64946990-64947009 Msa0615460:CDS 20.0%
!!! TTAAGCATTTTTTGAATGAT+GGG + chr4_2:64946991-64947010 Msa0615460:CDS 20.0%
!!! TTGAGATCTTTCATTTTAAA+AGG + chr4_2:64947359-64947378 Msa0615460:three_prime_UTR 20.0%
!! TTTAAAAGGATAAGAGTAAA+TGG + chr4_2:64947373-64947392 Msa0615460:three_prime_UTR 20.0%
! ATTATACGAAACATAAAGCT+GGG - chr4_2:64946210-64946229 None:intergenic 25.0%
!!! TGATTTGATTAGTTCAGTTT+TGG - chr4_2:64946243-64946262 None:intergenic 25.0%
!!! AATGTCCACTCATATTTTTA+GGG + chr4_2:64946297-64946316 Msa0615460:five_prime_UTR 25.0%
!!! TTTTAACCTTTTTTCAACCT+AGG - chr4_2:64946574-64946593 None:intergenic 25.0%
!! AAGATGTTGATGAAATTGAA+GGG + chr4_2:64946823-64946842 Msa0615460:CDS 25.0%
!!! TAAGCATTTTTTGAATGATG+GGG + chr4_2:64946992-64947011 Msa0615460:CDS 25.0%
! GAAATTCTTGAATAGTTGAA+GGG - chr4_2:64947115-64947134 None:intergenic 25.0%
! AGAAATTCTTGAATAGTTGA+AGG - chr4_2:64947116-64947135 None:intergenic 25.0%
! CCAATAAAATAAATACTGTG+TGG - chr4_2:64947294-64947313 None:intergenic 25.0%
!!! CCACACAGTATTTATTTTAT+TGG + chr4_2:64947291-64947310 Msa0615460:three_prime_UTR 25.0%
! ATTATACGAAACATAAAGCT+GGG - chr4_2:64946210-64946229 None:intergenic 25.0%
!!! TGATTTGATTAGTTCAGTTT+TGG - chr4_2:64946243-64946262 None:intergenic 25.0%
!!! AATGTCCACTCATATTTTTA+GGG + chr4_2:64946297-64946316 Msa0615460:five_prime_UTR 25.0%
!!! TTTTAACCTTTTTTCAACCT+AGG - chr4_2:64946574-64946593 None:intergenic 25.0%
!! AAGATGTTGATGAAATTGAA+GGG + chr4_2:64946823-64946842 Msa0615460:CDS 25.0%
!!! TAAGCATTTTTTGAATGATG+GGG + chr4_2:64946992-64947011 Msa0615460:CDS 25.0%
! GAAATTCTTGAATAGTTGAA+GGG - chr4_2:64947115-64947134 None:intergenic 25.0%
! AGAAATTCTTGAATAGTTGA+AGG - chr4_2:64947116-64947135 None:intergenic 25.0%
! CCAATAAAATAAATACTGTG+TGG - chr4_2:64947294-64947313 None:intergenic 25.0%
!!! CCACACAGTATTTATTTTAT+TGG + chr4_2:64947291-64947310 Msa0615460:three_prime_UTR 25.0%
GATAAATGTACTCGTATGAA+TGG - chr4_2:64945226-64945245 None:intergenic 30.0%
AAACATAAAGCTGGGAATAT+GGG - chr4_2:64946202-64946221 None:intergenic 30.0%
GATTATACGAAACATAAAGC+TGG - chr4_2:64946211-64946230 None:intergenic 30.0%
! CAATGTCCACTCATATTTTT+AGG + chr4_2:64946296-64946315 Msa0615460:five_prime_UTR 30.0%
ATGTTGAAGTAACTCTAATG+TGG - chr4_2:64946393-64946412 None:intergenic 30.0%
! TTTGTACCTAGGTTGAAAAA+AGG + chr4_2:64946565-64946584 Msa0615460:intron 30.0%
AAGGAGTAGTAATTTGAGAA+GGG - chr4_2:64946785-64946804 None:intergenic 30.0%
! GAAGATGTTGATGAAATTGA+AGG + chr4_2:64946822-64946841 Msa0615460:CDS 30.0%
! AAGCTATTAGGTGATTTTGA+GGG + chr4_2:64946852-64946871 Msa0615460:CDS 30.0%
!! AGATTGGCACATTTACTTTT+AGG + chr4_2:64947035-64947054 Msa0615460:CDS 30.0%
!! GATTGGCACATTTACTTTTA+GGG + chr4_2:64947036-64947055 Msa0615460:CDS 30.0%
GTTATGATGCTTCATTTACT+GGG - chr4_2:64947152-64947171 None:intergenic 30.0%
AGTTATGATGCTTCATTTAC+TGG - chr4_2:64947153-64947172 None:intergenic 30.0%
AGGATAAGAGTAAATGGTTA+TGG + chr4_2:64947379-64947398 Msa0615460:three_prime_UTR 30.0%
GATAAATGTACTCGTATGAA+TGG - chr4_2:64945226-64945245 None:intergenic 30.0%
AAACATAAAGCTGGGAATAT+GGG - chr4_2:64946202-64946221 None:intergenic 30.0%
GATTATACGAAACATAAAGC+TGG - chr4_2:64946211-64946230 None:intergenic 30.0%
! CAATGTCCACTCATATTTTT+AGG + chr4_2:64946296-64946315 Msa0615460:five_prime_UTR 30.0%
ATGTTGAAGTAACTCTAATG+TGG - chr4_2:64946393-64946412 None:intergenic 30.0%
! TTTGTACCTAGGTTGAAAAA+AGG + chr4_2:64946565-64946584 Msa0615460:intron 30.0%
AAGGAGTAGTAATTTGAGAA+GGG - chr4_2:64946785-64946804 None:intergenic 30.0%
! GAAGATGTTGATGAAATTGA+AGG + chr4_2:64946822-64946841 Msa0615460:CDS 30.0%
! AAGCTATTAGGTGATTTTGA+GGG + chr4_2:64946852-64946871 Msa0615460:CDS 30.0%
!! AGATTGGCACATTTACTTTT+AGG + chr4_2:64947035-64947054 Msa0615460:CDS 30.0%
!! GATTGGCACATTTACTTTTA+GGG + chr4_2:64947036-64947055 Msa0615460:CDS 30.0%
GTTATGATGCTTCATTTACT+GGG - chr4_2:64947152-64947171 None:intergenic 30.0%
AGTTATGATGCTTCATTTAC+TGG - chr4_2:64947153-64947172 None:intergenic 30.0%
AGGATAAGAGTAAATGGTTA+TGG + chr4_2:64947379-64947398 Msa0615460:three_prime_UTR 30.0%
! TATGGATGACTTCAAGTTCA+CGG - chr4_2:64945568-64945587 None:intergenic 35.0%
! TCTCGCAATGGTGTTAAATT+CGG + chr4_2:64945638-64945657 Msa0615460:five_prime_UTR 35.0%
AAGGTTAAGGAACTCAAGAA+CGG + chr4_2:64945911-64945930 Msa0615460:five_prime_UTR 35.0%
TTAGCCATGTTCTCTATGTT+CGG + chr4_2:64945938-64945957 Msa0615460:five_prime_UTR 35.0%
TATGTTCGGATTCTTTGTTC+AGG + chr4_2:64945952-64945971 Msa0615460:five_prime_UTR 35.0%
ATAATGACCATTCACTTTCC+GGG - chr4_2:64946073-64946092 None:intergenic 35.0%
CATAATGACCATTCACTTTC+CGG - chr4_2:64946074-64946093 None:intergenic 35.0%
ATAATAATTCACATTCCCGC+AGG - chr4_2:64946119-64946138 None:intergenic 35.0%
GAAACATAAAGCTGGGAATA+TGG - chr4_2:64946203-64946222 None:intergenic 35.0%
!! AGTTCAGTTTTGGTAGCATA+TGG - chr4_2:64946233-64946252 None:intergenic 35.0%
ATGTGCCCTAAAAATATGAG+TGG - chr4_2:64946305-64946324 None:intergenic 35.0%
!!! TCATATTTTTAGGGCACATG+TGG + chr4_2:64946306-64946325 Msa0615460:five_prime_UTR 35.0%
GAATGTGAAGACATTGAGAA+TGG - chr4_2:64946435-64946454 None:intergenic 35.0%
ATTCTTCTCATCGTTAAGAC+AGG + chr4_2:64946458-64946477 Msa0615460:CDS 35.0%
ATGTTTGGTTGCAACTTTGT+TGG - chr4_2:64946686-64946705 None:intergenic 35.0%
!! AATTTGAGAAGGGTGTTGAT+GGG - chr4_2:64946775-64946794 None:intergenic 35.0%
!! TAATTTGAGAAGGGTGTTGA+TGG - chr4_2:64946776-64946795 None:intergenic 35.0%
GAAGGAGTAGTAATTTGAGA+AGG - chr4_2:64946786-64946805 None:intergenic 35.0%
TCTTCTTGAGTTTCATCTGA+AGG - chr4_2:64946804-64946823 None:intergenic 35.0%
GAAGGGTTAATGAAGCTATT+AGG + chr4_2:64946840-64946859 Msa0615460:CDS 35.0%
! GAAGCTATTAGGTGATTTTG+AGG + chr4_2:64946851-64946870 Msa0615460:CDS 35.0%
TGTGATTCTTGTCATTGTGA+AGG + chr4_2:64946894-64946913 Msa0615460:CDS 35.0%
ATTCTTGTCATTGTGAAGGT+GGG + chr4_2:64946898-64946917 Msa0615460:CDS 35.0%
!!! GGGTTTTATTCCAAGATTGT+TGG + chr4_2:64946918-64946937 Msa0615460:CDS 35.0%
TTATTCCAAGATTGTTGGTG+TGG + chr4_2:64946923-64946942 Msa0615460:CDS 35.0%
AACACCTCTTTCTTACACTT+TGG - chr4_2:64946954-64946973 None:intergenic 35.0%
AGTAAATGTGCCAATCTCAA+TGG - chr4_2:64947032-64947051 None:intergenic 35.0%
!!! GGAAAGCTGCTTTTATTTCT+GGG + chr4_2:64947057-64947076 Msa0615460:CDS 35.0%
!!! GAAAGCTGCTTTTATTTCTG+GGG + chr4_2:64947058-64947077 Msa0615460:CDS 35.0%
!!! AAAGCTGCTTTTATTTCTGG+GGG + chr4_2:64947059-64947078 Msa0615460:CDS 35.0%
!!! AAATAGTGGTTTTGGAGACT+TGG + chr4_2:64947085-64947104 Msa0615460:CDS 35.0%
AAATGTACTCGTATGAATGG+TGG - chr4_2:64945223-64945242 None:intergenic 35.0%
! TATGGATGACTTCAAGTTCA+CGG - chr4_2:64945568-64945587 None:intergenic 35.0%
! TCTCGCAATGGTGTTAAATT+CGG + chr4_2:64945638-64945657 Msa0615460:five_prime_UTR 35.0%
AAGGTTAAGGAACTCAAGAA+CGG + chr4_2:64945911-64945930 Msa0615460:five_prime_UTR 35.0%
TTAGCCATGTTCTCTATGTT+CGG + chr4_2:64945938-64945957 Msa0615460:five_prime_UTR 35.0%
TATGTTCGGATTCTTTGTTC+AGG + chr4_2:64945952-64945971 Msa0615460:five_prime_UTR 35.0%
ATAATGACCATTCACTTTCC+GGG - chr4_2:64946073-64946092 None:intergenic 35.0%
CATAATGACCATTCACTTTC+CGG - chr4_2:64946074-64946093 None:intergenic 35.0%
ATAATAATTCACATTCCCGC+AGG - chr4_2:64946119-64946138 None:intergenic 35.0%
GAAACATAAAGCTGGGAATA+TGG - chr4_2:64946203-64946222 None:intergenic 35.0%
!! AGTTCAGTTTTGGTAGCATA+TGG - chr4_2:64946233-64946252 None:intergenic 35.0%
ATGTGCCCTAAAAATATGAG+TGG - chr4_2:64946305-64946324 None:intergenic 35.0%
!!! TCATATTTTTAGGGCACATG+TGG + chr4_2:64946306-64946325 Msa0615460:five_prime_UTR 35.0%
GAATGTGAAGACATTGAGAA+TGG - chr4_2:64946435-64946454 None:intergenic 35.0%
ATTCTTCTCATCGTTAAGAC+AGG + chr4_2:64946458-64946477 Msa0615460:CDS 35.0%
ATGTTTGGTTGCAACTTTGT+TGG - chr4_2:64946686-64946705 None:intergenic 35.0%
!! AATTTGAGAAGGGTGTTGAT+GGG - chr4_2:64946775-64946794 None:intergenic 35.0%
!! TAATTTGAGAAGGGTGTTGA+TGG - chr4_2:64946776-64946795 None:intergenic 35.0%
GAAGGAGTAGTAATTTGAGA+AGG - chr4_2:64946786-64946805 None:intergenic 35.0%
TCTTCTTGAGTTTCATCTGA+AGG - chr4_2:64946804-64946823 None:intergenic 35.0%
GAAGGGTTAATGAAGCTATT+AGG + chr4_2:64946840-64946859 Msa0615460:CDS 35.0%
! GAAGCTATTAGGTGATTTTG+AGG + chr4_2:64946851-64946870 Msa0615460:CDS 35.0%
TGTGATTCTTGTCATTGTGA+AGG + chr4_2:64946894-64946913 Msa0615460:CDS 35.0%
ATTCTTGTCATTGTGAAGGT+GGG + chr4_2:64946898-64946917 Msa0615460:CDS 35.0%
!!! GGGTTTTATTCCAAGATTGT+TGG + chr4_2:64946918-64946937 Msa0615460:CDS 35.0%
TTATTCCAAGATTGTTGGTG+TGG + chr4_2:64946923-64946942 Msa0615460:CDS 35.0%
AACACCTCTTTCTTACACTT+TGG - chr4_2:64946954-64946973 None:intergenic 35.0%
AGTAAATGTGCCAATCTCAA+TGG - chr4_2:64947032-64947051 None:intergenic 35.0%
!!! GGAAAGCTGCTTTTATTTCT+GGG + chr4_2:64947057-64947076 Msa0615460:CDS 35.0%
!!! GAAAGCTGCTTTTATTTCTG+GGG + chr4_2:64947058-64947077 Msa0615460:CDS 35.0%
!!! AAAGCTGCTTTTATTTCTGG+GGG + chr4_2:64947059-64947078 Msa0615460:CDS 35.0%
!!! AAATAGTGGTTTTGGAGACT+TGG + chr4_2:64947085-64947104 Msa0615460:CDS 35.0%
CTAAGTACTTAACACGGTCT+GGG - chr4_2:64945439-64945458 None:intergenic 40.0%
ATGGGCCTAAGTACTTAACA+CGG - chr4_2:64945445-64945464 None:intergenic 40.0%
AACTCTCCAGTCAAGTAAGA+CGG - chr4_2:64945482-64945501 None:intergenic 40.0%
AACTTGAAGTCATCCATAGC+AGG + chr4_2:64945570-64945589 Msa0615460:five_prime_UTR 40.0%
! CAATGGTGTTAAATTCGGTG+AGG + chr4_2:64945643-64945662 Msa0615460:five_prime_UTR 40.0%
! TTAAATTCGGTGAGGCTGTA+TGG + chr4_2:64945651-64945670 Msa0615460:five_prime_UTR 40.0%
GCCACTCAAGTTATCTTGAT+GGG + chr4_2:64945767-64945786 Msa0615460:five_prime_UTR 40.0%
TCCCATCAAGATAACTTGAG+TGG - chr4_2:64945771-64945790 None:intergenic 40.0%
AGCAATACGGTAACCTTCAA+CGG - chr4_2:64945795-64945814 None:intergenic 40.0%
TTTCGCAGAGTTGAAGGTTA+AGG + chr4_2:64945898-64945917 Msa0615460:five_prime_UTR 40.0%
GAATCCGAACATAGAGAACA+TGG - chr4_2:64945945-64945964 None:intergenic 40.0%
TTTGTTCAGGCTATTGTGAC+CGG + chr4_2:64945965-64945984 Msa0615460:five_prime_UTR 40.0%
GTTATGTAACGTTCTTCCTG+CGG + chr4_2:64946100-64946119 Msa0615460:five_prime_UTR 40.0%
TTATGTAACGTTCTTCCTGC+GGG + chr4_2:64946101-64946120 Msa0615460:five_prime_UTR 40.0%
CAACTTTGTTGGAGGAACAA+AGG - chr4_2:64946675-64946694 None:intergenic 40.0%
TTTGGTTGCAACTTTGTTGG+AGG - chr4_2:64946683-64946702 None:intergenic 40.0%
GAAACTGAGAGGAATTGTTG+AGG - chr4_2:64946735-64946754 None:intergenic 40.0%
CAATTCCTCTCAGTTTCTCA+AGG + chr4_2:64946738-64946757 Msa0615460:CDS 40.0%
TGAATCCTTGAGAAACTGAG+AGG - chr4_2:64946746-64946765 None:intergenic 40.0%
GATTCTTGTCATTGTGAAGG+TGG + chr4_2:64946897-64946916 Msa0615460:CDS 40.0%
!! AGTGTAAGAAAGAGGTGTTG+AGG + chr4_2:64946955-64946974 Msa0615460:CDS 40.0%
!! TAAGAAAGAGGTGTTGAGGT+TGG + chr4_2:64946959-64946978 Msa0615460:CDS 40.0%
!!! GCATTTTTTGAATGATGGGG+TGG + chr4_2:64946995-64947014 Msa0615460:CDS 40.0%
GAAGAAAGAGCCATTGAGAT+TGG + chr4_2:64947019-64947038 Msa0615460:CDS 40.0%
!!! GGGAAAGCTGCTTTTATTTC+TGG + chr4_2:64947056-64947075 Msa0615460:CDS 40.0%
ATGATGCTTCATTTACTGGG+AGG - chr4_2:64947149-64947168 None:intergenic 40.0%
CTAAGTACTTAACACGGTCT+GGG - chr4_2:64945439-64945458 None:intergenic 40.0%
ATGGGCCTAAGTACTTAACA+CGG - chr4_2:64945445-64945464 None:intergenic 40.0%
AACTCTCCAGTCAAGTAAGA+CGG - chr4_2:64945482-64945501 None:intergenic 40.0%
AACTTGAAGTCATCCATAGC+AGG + chr4_2:64945570-64945589 Msa0615460:five_prime_UTR 40.0%
! CAATGGTGTTAAATTCGGTG+AGG + chr4_2:64945643-64945662 Msa0615460:five_prime_UTR 40.0%
! TTAAATTCGGTGAGGCTGTA+TGG + chr4_2:64945651-64945670 Msa0615460:five_prime_UTR 40.0%
GCCACTCAAGTTATCTTGAT+GGG + chr4_2:64945767-64945786 Msa0615460:five_prime_UTR 40.0%
TCCCATCAAGATAACTTGAG+TGG - chr4_2:64945771-64945790 None:intergenic 40.0%
AGCAATACGGTAACCTTCAA+CGG - chr4_2:64945795-64945814 None:intergenic 40.0%
TTTCGCAGAGTTGAAGGTTA+AGG + chr4_2:64945898-64945917 Msa0615460:five_prime_UTR 40.0%
GAATCCGAACATAGAGAACA+TGG - chr4_2:64945945-64945964 None:intergenic 40.0%
TTTGTTCAGGCTATTGTGAC+CGG + chr4_2:64945965-64945984 Msa0615460:five_prime_UTR 40.0%
GTTATGTAACGTTCTTCCTG+CGG + chr4_2:64946100-64946119 Msa0615460:five_prime_UTR 40.0%
TTATGTAACGTTCTTCCTGC+GGG + chr4_2:64946101-64946120 Msa0615460:five_prime_UTR 40.0%
CAACTTTGTTGGAGGAACAA+AGG - chr4_2:64946675-64946694 None:intergenic 40.0%
TTTGGTTGCAACTTTGTTGG+AGG - chr4_2:64946683-64946702 None:intergenic 40.0%
GAAACTGAGAGGAATTGTTG+AGG - chr4_2:64946735-64946754 None:intergenic 40.0%
CAATTCCTCTCAGTTTCTCA+AGG + chr4_2:64946738-64946757 Msa0615460:CDS 40.0%
TGAATCCTTGAGAAACTGAG+AGG - chr4_2:64946746-64946765 None:intergenic 40.0%
GATTCTTGTCATTGTGAAGG+TGG + chr4_2:64946897-64946916 Msa0615460:CDS 40.0%
!! AGTGTAAGAAAGAGGTGTTG+AGG + chr4_2:64946955-64946974 Msa0615460:CDS 40.0%
!! TAAGAAAGAGGTGTTGAGGT+TGG + chr4_2:64946959-64946978 Msa0615460:CDS 40.0%
!!! GCATTTTTTGAATGATGGGG+TGG + chr4_2:64946995-64947014 Msa0615460:CDS 40.0%
GAAGAAAGAGCCATTGAGAT+TGG + chr4_2:64947019-64947038 Msa0615460:CDS 40.0%
!!! GGGAAAGCTGCTTTTATTTC+TGG + chr4_2:64947056-64947075 Msa0615460:CDS 40.0%
ATGATGCTTCATTTACTGGG+AGG - chr4_2:64947149-64947168 None:intergenic 40.0%
AACCCCTTCAAGCCAAGAAT+TGG + chr4_2:64945340-64945359 Msa0615460:five_prime_UTR 45.0%
ACCCCTTCAAGCCAAGAATT+GGG + chr4_2:64945341-64945360 Msa0615460:five_prime_UTR 45.0%
! TCCCAATTCTTGGCTTGAAG+GGG - chr4_2:64945345-64945364 None:intergenic 45.0%
! CTCCCAATTCTTGGCTTGAA+GGG - chr4_2:64945346-64945365 None:intergenic 45.0%
CCTAAGTACTTAACACGGTC+TGG - chr4_2:64945440-64945459 None:intergenic 45.0%
CCAGACCGTGTTAAGTACTT+AGG + chr4_2:64945437-64945456 Msa0615460:five_prime_UTR 45.0%
AAGTACTTAGGCCCATTCTC+TGG + chr4_2:64945449-64945468 Msa0615460:five_prime_UTR 45.0%
ACTCTCCAGTCAAGTAAGAC+GGG - chr4_2:64945481-64945500 None:intergenic 45.0%
! GACTTCAAGTTCACGGTTCT+TGG - chr4_2:64945561-64945580 None:intergenic 45.0%
TTGAAGTCATCCATAGCAGG+TGG + chr4_2:64945573-64945592 Msa0615460:five_prime_UTR 45.0%
TGAAGTCATCCATAGCAGGT+GGG + chr4_2:64945574-64945593 Msa0615460:five_prime_UTR 45.0%
CATTGCGAGACAAAAGCTCT+GGG - chr4_2:64945628-64945647 None:intergenic 45.0%
CTACTTGGGTAACCCAAGTT+TGG + chr4_2:64945715-64945734 Msa0615460:five_prime_UTR 45.0%
TCTGAGCATGGACCAAACTT+GGG - chr4_2:64945730-64945749 None:intergenic 45.0%
! TCAGAGCATTCTTGCCATCT+GGG + chr4_2:64945745-64945764 Msa0615460:five_prime_UTR 45.0%
GGCCACTCAAGTTATCTTGA+TGG + chr4_2:64945766-64945785 Msa0615460:five_prime_UTR 45.0%
GTTGAAGGTTACCGTATTGC+TGG + chr4_2:64945794-64945813 Msa0615460:five_prime_UTR 45.0%
TGATCAGCAAGGTTCTCCAA+AGG - chr4_2:64945998-64946017 None:intergenic 45.0%
TATGCCACCAACTTTGTTCC+CGG + chr4_2:64946052-64946071 Msa0615460:five_prime_UTR 45.0%
TCACTTTCCGGGAACAAAGT+TGG - chr4_2:64946062-64946081 None:intergenic 45.0%
CTTTGTTCCCGGAAAGTGAA+TGG + chr4_2:64946063-64946082 Msa0615460:five_prime_UTR 45.0%
TTTCTTGTGTGGGGCATGTT+TGG - chr4_2:64946701-64946720 None:intergenic 45.0%
!! GTTCGCTGTTTTCTTGTGTG+GGG - chr4_2:64946710-64946729 None:intergenic 45.0%
!! GGTTCGCTGTTTTCTTGTGT+GGG - chr4_2:64946711-64946730 None:intergenic 45.0%
!! AGGTTCGCTGTTTTCTTGTG+TGG - chr4_2:64946712-64946731 None:intergenic 45.0%
ACTGAGAGGAATTGTTGAGG+AGG - chr4_2:64946732-64946751 None:intergenic 45.0%
!! AGGTGATTTTGAGGGTGATG+AGG + chr4_2:64946860-64946879 Msa0615460:CDS 45.0%
!! GATTTTGAGGGTGATGAGGA+TGG + chr4_2:64946864-64946883 Msa0615460:CDS 45.0%
TTCCAAGATTGTTGGTGTGG+AGG + chr4_2:64946926-64946945 Msa0615460:CDS 45.0%
TCCAAGATTGTTGGTGTGGA+GGG + chr4_2:64946927-64946946 Msa0615460:CDS 45.0%
GGGACCAAAGTGTAAGAAAG+AGG + chr4_2:64946947-64946966 Msa0615460:CDS 45.0%
!! AAAGAGGTGTTGAGGTTGGA+TGG + chr4_2:64946963-64946982 Msa0615460:CDS 45.0%
!! AAGAGGTGTTGAGGTTGGAT+GGG + chr4_2:64946964-64946983 Msa0615460:CDS 45.0%
! ATTTCTGGGGGTGCAAATAG+TGG + chr4_2:64947071-64947090 Msa0615460:CDS 45.0%
AACCCCTTCAAGCCAAGAAT+TGG + chr4_2:64945340-64945359 Msa0615460:five_prime_UTR 45.0%
ACCCCTTCAAGCCAAGAATT+GGG + chr4_2:64945341-64945360 Msa0615460:five_prime_UTR 45.0%
! TCCCAATTCTTGGCTTGAAG+GGG - chr4_2:64945345-64945364 None:intergenic 45.0%
! CTCCCAATTCTTGGCTTGAA+GGG - chr4_2:64945346-64945365 None:intergenic 45.0%
CCTAAGTACTTAACACGGTC+TGG - chr4_2:64945440-64945459 None:intergenic 45.0%
CCAGACCGTGTTAAGTACTT+AGG + chr4_2:64945437-64945456 Msa0615460:five_prime_UTR 45.0%
AAGTACTTAGGCCCATTCTC+TGG + chr4_2:64945449-64945468 Msa0615460:five_prime_UTR 45.0%
ACTCTCCAGTCAAGTAAGAC+GGG - chr4_2:64945481-64945500 None:intergenic 45.0%
! GACTTCAAGTTCACGGTTCT+TGG - chr4_2:64945561-64945580 None:intergenic 45.0%
TTGAAGTCATCCATAGCAGG+TGG + chr4_2:64945573-64945592 Msa0615460:five_prime_UTR 45.0%
TGAAGTCATCCATAGCAGGT+GGG + chr4_2:64945574-64945593 Msa0615460:five_prime_UTR 45.0%
CATTGCGAGACAAAAGCTCT+GGG - chr4_2:64945628-64945647 None:intergenic 45.0%
CTACTTGGGTAACCCAAGTT+TGG + chr4_2:64945715-64945734 Msa0615460:five_prime_UTR 45.0%
TCTGAGCATGGACCAAACTT+GGG - chr4_2:64945730-64945749 None:intergenic 45.0%
! TCAGAGCATTCTTGCCATCT+GGG + chr4_2:64945745-64945764 Msa0615460:five_prime_UTR 45.0%
GGCCACTCAAGTTATCTTGA+TGG + chr4_2:64945766-64945785 Msa0615460:five_prime_UTR 45.0%
GTTGAAGGTTACCGTATTGC+TGG + chr4_2:64945794-64945813 Msa0615460:five_prime_UTR 45.0%
TGATCAGCAAGGTTCTCCAA+AGG - chr4_2:64945998-64946017 None:intergenic 45.0%
TATGCCACCAACTTTGTTCC+CGG + chr4_2:64946052-64946071 Msa0615460:five_prime_UTR 45.0%
TCACTTTCCGGGAACAAAGT+TGG - chr4_2:64946062-64946081 None:intergenic 45.0%
CTTTGTTCCCGGAAAGTGAA+TGG + chr4_2:64946063-64946082 Msa0615460:five_prime_UTR 45.0%
TTTCTTGTGTGGGGCATGTT+TGG - chr4_2:64946701-64946720 None:intergenic 45.0%
!! GTTCGCTGTTTTCTTGTGTG+GGG - chr4_2:64946710-64946729 None:intergenic 45.0%
!! GGTTCGCTGTTTTCTTGTGT+GGG - chr4_2:64946711-64946730 None:intergenic 45.0%
!! AGGTTCGCTGTTTTCTTGTG+TGG - chr4_2:64946712-64946731 None:intergenic 45.0%
ACTGAGAGGAATTGTTGAGG+AGG - chr4_2:64946732-64946751 None:intergenic 45.0%
!! AGGTGATTTTGAGGGTGATG+AGG + chr4_2:64946860-64946879 Msa0615460:CDS 45.0%
!! GATTTTGAGGGTGATGAGGA+TGG + chr4_2:64946864-64946883 Msa0615460:CDS 45.0%
TTCCAAGATTGTTGGTGTGG+AGG + chr4_2:64946926-64946945 Msa0615460:CDS 45.0%
TCCAAGATTGTTGGTGTGGA+GGG + chr4_2:64946927-64946946 Msa0615460:CDS 45.0%
GGGACCAAAGTGTAAGAAAG+AGG + chr4_2:64946947-64946966 Msa0615460:CDS 45.0%
!! AAAGAGGTGTTGAGGTTGGA+TGG + chr4_2:64946963-64946982 Msa0615460:CDS 45.0%
!! AAGAGGTGTTGAGGTTGGAT+GGG + chr4_2:64946964-64946983 Msa0615460:CDS 45.0%
! ATTTCTGGGGGTGCAAATAG+TGG + chr4_2:64947071-64947090 Msa0615460:CDS 45.0%
!!! AAATTTTAAAAAGTAAAATA+AGG - chr4_2:64947176-64947195 None:intergenic 5.0%
!!! AAATTTTAAAAAGTAAAATA+AGG - chr4_2:64947176-64947195 None:intergenic 5.0%
AACAATGGCCGCATCATCCA+TGG + chr4_2:64945277-64945296 Msa0615460:five_prime_UTR 50.0%
AGAGAGAGCCATGGATGATG+CGG - chr4_2:64945288-64945307 None:intergenic 50.0%
!! CTTGAAGGGGTTAGCTTGAC+TGG - chr4_2:64945332-64945351 None:intergenic 50.0%
! GCTCCCAATTCTTGGCTTGA+AGG - chr4_2:64945347-64945366 None:intergenic 50.0%
ACCTTGCAGCTCCCAATTCT+TGG - chr4_2:64945355-64945374 None:intergenic 50.0%
! TGAGGAGGCTACTTTCTTGG+TGG - chr4_2:64945399-64945418 None:intergenic 50.0%
ACCAAGAAAGTAGCCTCCTC+AGG + chr4_2:64945398-64945417 Msa0615460:five_prime_UTR 50.0%
! TCCTGAGGAGGCTACTTTCT+TGG - chr4_2:64945402-64945421 None:intergenic 50.0%
TCTCCAGTCAAGTAAGACGG+GGG - chr4_2:64945479-64945498 None:intergenic 50.0%
CTCTCCAGTCAAGTAAGACG+GGG - chr4_2:64945480-64945499 None:intergenic 50.0%
TACTTGACTGGAGAGTTCCC+AGG + chr4_2:64945485-64945504 Msa0615460:five_prime_UTR 50.0%
GGTTCTTGGCGAATGTCTCT+GGG - chr4_2:64945547-64945566 None:intergenic 50.0%
!! CATAGCAGGTGGGCTATGTT+GGG + chr4_2:64945584-64945603 Msa0615460:five_prime_UTR 50.0%
! CTCTGGGAAAACACATCCCA+AGG - chr4_2:64945612-64945631 None:intergenic 50.0%
CCATTGCGAGACAAAAGCTC+TGG - chr4_2:64945629-64945648 None:intergenic 50.0%
! CCAGAGCTTTTGTCTCGCAA+TGG + chr4_2:64945626-64945645 Msa0615460:five_prime_UTR 50.0%
! CTCGCTAAAGATCTGGGATC+CGG - chr4_2:64945684-64945703 None:intergenic 50.0%
GGATCCCAGATCTTTAGCGA+GGG + chr4_2:64945683-64945702 Msa0615460:five_prime_UTR 50.0%
TCCACCCTCGCTAAAGATCT+GGG - chr4_2:64945690-64945709 None:intergenic 50.0%
! GAGGGTGGACTTGACTACTT+GGG + chr4_2:64945701-64945720 Msa0615460:five_prime_UTR 50.0%
CTCTGAGCATGGACCAAACT+TGG - chr4_2:64945731-64945750 None:intergenic 50.0%
! TGGCAAGAATGCTCTGAGCA+TGG - chr4_2:64945742-64945761 None:intergenic 50.0%
! CTCAGAGCATTCTTGCCATC+TGG + chr4_2:64945744-64945763 Msa0615460:five_prime_UTR 50.0%
GATAACTTGAGTGGCCCAGA+TGG - chr4_2:64945762-64945781 None:intergenic 50.0%
ATCTTGATGGGAGCCGTTGA+AGG + chr4_2:64945779-64945798 Msa0615460:five_prime_UTR 50.0%
GAAGGTTACCGTATTGCTGG+TGG + chr4_2:64945797-64945816 Msa0615460:five_prime_UTR 50.0%
CAAGAGGTCCACCAGCAATA+CGG - chr4_2:64945808-64945827 None:intergenic 50.0%
GGGTCAACAACTTCACCAAG+AGG - chr4_2:64945824-64945843 None:intergenic 50.0%
GTTGTTGACCCACTTTACCC+AGG + chr4_2:64945833-64945852 Msa0615460:five_prime_UTR 50.0%
TCAACTCTGCGAAAGCCTCT+GGG - chr4_2:64945892-64945911 None:intergenic 50.0%
TTCAACTCTGCGAAAGCCTC+TGG - chr4_2:64945893-64945912 None:intergenic 50.0%
AGAGGCTTTCGCAGAGTTGA+AGG + chr4_2:64945892-64945911 Msa0615460:five_prime_UTR 50.0%
TCAGGCTATTGTGACCGGAA+AGG + chr4_2:64945970-64945989 Msa0615460:five_prime_UTR 50.0%
CAGGCTATTGTGACCGGAAA+GGG + chr4_2:64945971-64945990 Msa0615460:five_prime_UTR 50.0%
GTTCTCCAAAGGTCCCTTTC+CGG - chr4_2:64945987-64946006 None:intergenic 50.0%
GGTCAGCAAGATGATCAGCA+AGG - chr4_2:64946009-64946028 None:intergenic 50.0%
ACCCAGTCAACAACAACGCA+TGG + chr4_2:64946026-64946045 Msa0615460:five_prime_UTR 50.0%
! CCCATGCGTTGTTGTTGACT+GGG - chr4_2:64946030-64946049 None:intergenic 50.0%
CCCAGTCAACAACAACGCAT+GGG + chr4_2:64946027-64946046 Msa0615460:five_prime_UTR 50.0%
!! GGGAACAAAGTTGGTGGCAT+AGG - chr4_2:64946053-64946072 None:intergenic 50.0%
CTTTCCGGGAACAAAGTTGG+TGG - chr4_2:64946059-64946078 None:intergenic 50.0%
TTTGAGGGTGATGAGGATGG+TGG + chr4_2:64946867-64946886 Msa0615460:CDS 50.0%
TCCCTCCACACCAACAATCT+TGG - chr4_2:64946931-64946950 None:intergenic 50.0%
!! GGGGGTGCAAATAGTGGTTT+TGG + chr4_2:64947077-64947096 Msa0615460:CDS 50.0%
AACAATGGCCGCATCATCCA+TGG + chr4_2:64945277-64945296 Msa0615460:five_prime_UTR 50.0%
AGAGAGAGCCATGGATGATG+CGG - chr4_2:64945288-64945307 None:intergenic 50.0%
!! CTTGAAGGGGTTAGCTTGAC+TGG - chr4_2:64945332-64945351 None:intergenic 50.0%
! GCTCCCAATTCTTGGCTTGA+AGG - chr4_2:64945347-64945366 None:intergenic 50.0%
ACCTTGCAGCTCCCAATTCT+TGG - chr4_2:64945355-64945374 None:intergenic 50.0%
! TGAGGAGGCTACTTTCTTGG+TGG - chr4_2:64945399-64945418 None:intergenic 50.0%
ACCAAGAAAGTAGCCTCCTC+AGG + chr4_2:64945398-64945417 Msa0615460:five_prime_UTR 50.0%
! TCCTGAGGAGGCTACTTTCT+TGG - chr4_2:64945402-64945421 None:intergenic 50.0%
TCTCCAGTCAAGTAAGACGG+GGG - chr4_2:64945479-64945498 None:intergenic 50.0%
CTCTCCAGTCAAGTAAGACG+GGG - chr4_2:64945480-64945499 None:intergenic 50.0%
TACTTGACTGGAGAGTTCCC+AGG + chr4_2:64945485-64945504 Msa0615460:five_prime_UTR 50.0%
GGTTCTTGGCGAATGTCTCT+GGG - chr4_2:64945547-64945566 None:intergenic 50.0%
!! CATAGCAGGTGGGCTATGTT+GGG + chr4_2:64945584-64945603 Msa0615460:five_prime_UTR 50.0%
! CTCTGGGAAAACACATCCCA+AGG - chr4_2:64945612-64945631 None:intergenic 50.0%
CCATTGCGAGACAAAAGCTC+TGG - chr4_2:64945629-64945648 None:intergenic 50.0%
! CCAGAGCTTTTGTCTCGCAA+TGG + chr4_2:64945626-64945645 Msa0615460:five_prime_UTR 50.0%
! CTCGCTAAAGATCTGGGATC+CGG - chr4_2:64945684-64945703 None:intergenic 50.0%
GGATCCCAGATCTTTAGCGA+GGG + chr4_2:64945683-64945702 Msa0615460:five_prime_UTR 50.0%
TCCACCCTCGCTAAAGATCT+GGG - chr4_2:64945690-64945709 None:intergenic 50.0%
! GAGGGTGGACTTGACTACTT+GGG + chr4_2:64945701-64945720 Msa0615460:five_prime_UTR 50.0%
CTCTGAGCATGGACCAAACT+TGG - chr4_2:64945731-64945750 None:intergenic 50.0%
! TGGCAAGAATGCTCTGAGCA+TGG - chr4_2:64945742-64945761 None:intergenic 50.0%
! CTCAGAGCATTCTTGCCATC+TGG + chr4_2:64945744-64945763 Msa0615460:five_prime_UTR 50.0%
GATAACTTGAGTGGCCCAGA+TGG - chr4_2:64945762-64945781 None:intergenic 50.0%
ATCTTGATGGGAGCCGTTGA+AGG + chr4_2:64945779-64945798 Msa0615460:five_prime_UTR 50.0%
GAAGGTTACCGTATTGCTGG+TGG + chr4_2:64945797-64945816 Msa0615460:five_prime_UTR 50.0%
CAAGAGGTCCACCAGCAATA+CGG - chr4_2:64945808-64945827 None:intergenic 50.0%
GGGTCAACAACTTCACCAAG+AGG - chr4_2:64945824-64945843 None:intergenic 50.0%
GTTGTTGACCCACTTTACCC+AGG + chr4_2:64945833-64945852 Msa0615460:five_prime_UTR 50.0%
TCAACTCTGCGAAAGCCTCT+GGG - chr4_2:64945892-64945911 None:intergenic 50.0%
TTCAACTCTGCGAAAGCCTC+TGG - chr4_2:64945893-64945912 None:intergenic 50.0%
AGAGGCTTTCGCAGAGTTGA+AGG + chr4_2:64945892-64945911 Msa0615460:five_prime_UTR 50.0%
TCAGGCTATTGTGACCGGAA+AGG + chr4_2:64945970-64945989 Msa0615460:five_prime_UTR 50.0%
CAGGCTATTGTGACCGGAAA+GGG + chr4_2:64945971-64945990 Msa0615460:five_prime_UTR 50.0%
GTTCTCCAAAGGTCCCTTTC+CGG - chr4_2:64945987-64946006 None:intergenic 50.0%
GGTCAGCAAGATGATCAGCA+AGG - chr4_2:64946009-64946028 None:intergenic 50.0%
ACCCAGTCAACAACAACGCA+TGG + chr4_2:64946026-64946045 Msa0615460:five_prime_UTR 50.0%
! CCCATGCGTTGTTGTTGACT+GGG - chr4_2:64946030-64946049 None:intergenic 50.0%
CCCAGTCAACAACAACGCAT+GGG + chr4_2:64946027-64946046 Msa0615460:five_prime_UTR 50.0%
!! GGGAACAAAGTTGGTGGCAT+AGG - chr4_2:64946053-64946072 None:intergenic 50.0%
CTTTCCGGGAACAAAGTTGG+TGG - chr4_2:64946059-64946078 None:intergenic 50.0%
TTTGAGGGTGATGAGGATGG+TGG + chr4_2:64946867-64946886 Msa0615460:CDS 50.0%
TCCCTCCACACCAACAATCT+TGG - chr4_2:64946931-64946950 None:intergenic 50.0%
!! GGGGGTGCAAATAGTGGTTT+TGG + chr4_2:64947077-64947096 Msa0615460:CDS 50.0%
!! GGTTGGTGAAGAGAGAGCCA+TGG - chr4_2:64945297-64945316 None:intergenic 55.0%
GGCTCTCTCTTCACCAACCT+TGG + chr4_2:64945298-64945317 Msa0615460:five_prime_UTR 55.0%
CTCTCTTCACCAACCTTGGC+TGG + chr4_2:64945302-64945321 Msa0615460:five_prime_UTR 55.0%
GCCAAGAATTGGGAGCTGCA+AGG + chr4_2:64945351-64945370 Msa0615460:five_prime_UTR 55.0%
GAGCTGCAAGGTTCACCATG+AGG + chr4_2:64945363-64945382 Msa0615460:five_prime_UTR 55.0%
GGTGGTAGCAGACTTCCTCA+TGG - chr4_2:64945381-64945400 None:intergenic 55.0%
TCCTCAGGAAGCCCATGGTA+CGG + chr4_2:64945413-64945432 Msa0615460:five_prime_UTR 55.0%
GGAGAGTTCCCAGGTGACTA+CGG + chr4_2:64945494-64945513 Msa0615460:five_prime_UTR 55.0%
AGTTCCCAGGTGACTACGGA+TGG + chr4_2:64945498-64945517 Msa0615460:five_prime_UTR 55.0%
GTTCCCAGGTGACTACGGAT+GGG + chr4_2:64945499-64945518 Msa0615460:five_prime_UTR 55.0%
TGTCCCATCCGTAGTCACCT+GGG - chr4_2:64945505-64945524 None:intergenic 55.0%
CGGTTCTTGGCGAATGTCTC+TGG - chr4_2:64945548-64945567 None:intergenic 55.0%
CCAACATAGCCCACCTGCTA+TGG - chr4_2:64945586-64945605 None:intergenic 55.0%
!! CCATAGCAGGTGGGCTATGT+TGG + chr4_2:64945583-64945602 Msa0615460:five_prime_UTR 55.0%
TGGGCTATGTTGGGAGCCTT+GGG + chr4_2:64945593-64945612 Msa0615460:five_prime_UTR 55.0%
CGGTGAGGCTGTATGGTTCA+AGG + chr4_2:64945658-64945677 Msa0615460:five_prime_UTR 55.0%
GAGGCTGTATGGTTCAAGGC+CGG + chr4_2:64945662-64945681 Msa0615460:five_prime_UTR 55.0%
CGGATCCCAGATCTTTAGCG+AGG + chr4_2:64945682-64945701 Msa0615460:five_prime_UTR 55.0%
TCCCAGATCTTTAGCGAGGG+TGG + chr4_2:64945686-64945705 Msa0615460:five_prime_UTR 55.0%
GTCCACCCTCGCTAAAGATC+TGG - chr4_2:64945691-64945710 None:intergenic 55.0%
! CGAGGGTGGACTTGACTACT+TGG + chr4_2:64945700-64945719 Msa0615460:five_prime_UTR 55.0%
! CGTATTGCTGGTGGACCTCT+TGG + chr4_2:64945806-64945825 Msa0615460:five_prime_UTR 55.0%
GTTGACCCACTTTACCCAGG+AGG + chr4_2:64945836-64945855 Msa0615460:five_prime_UTR 55.0%
AGCTGCCTCCTGGGTAAAGT+GGG - chr4_2:64945844-64945863 None:intergenic 55.0%
AAGCTGCCTCCTGGGTAAAG+TGG - chr4_2:64945845-64945864 None:intergenic 55.0%
ATGGGTCAAAGCTGCCTCCT+GGG - chr4_2:64945853-64945872 None:intergenic 55.0%
AATGGGTCAAAGCTGCCTCC+TGG - chr4_2:64945854-64945873 None:intergenic 55.0%
! AGGAGGCAGCTTTGACCCAT+TGG + chr4_2:64945853-64945872 Msa0615460:five_prime_UTR 55.0%
! GGAGGCAGCTTTGACCCATT+GGG + chr4_2:64945854-64945873 Msa0615460:five_prime_UTR 55.0%
TGTGACCGGAAAGGGACCTT+TGG + chr4_2:64945979-64945998 Msa0615460:five_prime_UTR 55.0%
! GCCCATGCGTTGTTGTTGAC+TGG - chr4_2:64946031-64946050 None:intergenic 55.0%
!! AGGTGTTGAGGTTGGATGGG+TGG + chr4_2:64946967-64946986 Msa0615460:CDS 55.0%
!! GGTTGGTGAAGAGAGAGCCA+TGG - chr4_2:64945297-64945316 None:intergenic 55.0%
GGCTCTCTCTTCACCAACCT+TGG + chr4_2:64945298-64945317 Msa0615460:five_prime_UTR 55.0%
CTCTCTTCACCAACCTTGGC+TGG + chr4_2:64945302-64945321 Msa0615460:five_prime_UTR 55.0%
GCCAAGAATTGGGAGCTGCA+AGG + chr4_2:64945351-64945370 Msa0615460:five_prime_UTR 55.0%
GAGCTGCAAGGTTCACCATG+AGG + chr4_2:64945363-64945382 Msa0615460:five_prime_UTR 55.0%
GGTGGTAGCAGACTTCCTCA+TGG - chr4_2:64945381-64945400 None:intergenic 55.0%
TCCTCAGGAAGCCCATGGTA+CGG + chr4_2:64945413-64945432 Msa0615460:five_prime_UTR 55.0%
GGAGAGTTCCCAGGTGACTA+CGG + chr4_2:64945494-64945513 Msa0615460:five_prime_UTR 55.0%
AGTTCCCAGGTGACTACGGA+TGG + chr4_2:64945498-64945517 Msa0615460:five_prime_UTR 55.0%
GTTCCCAGGTGACTACGGAT+GGG + chr4_2:64945499-64945518 Msa0615460:five_prime_UTR 55.0%
TGTCCCATCCGTAGTCACCT+GGG - chr4_2:64945505-64945524 None:intergenic 55.0%
CGGTTCTTGGCGAATGTCTC+TGG - chr4_2:64945548-64945567 None:intergenic 55.0%
CCAACATAGCCCACCTGCTA+TGG - chr4_2:64945586-64945605 None:intergenic 55.0%
!! CCATAGCAGGTGGGCTATGT+TGG + chr4_2:64945583-64945602 Msa0615460:five_prime_UTR 55.0%
TGGGCTATGTTGGGAGCCTT+GGG + chr4_2:64945593-64945612 Msa0615460:five_prime_UTR 55.0%
CGGTGAGGCTGTATGGTTCA+AGG + chr4_2:64945658-64945677 Msa0615460:five_prime_UTR 55.0%
GAGGCTGTATGGTTCAAGGC+CGG + chr4_2:64945662-64945681 Msa0615460:five_prime_UTR 55.0%
CGGATCCCAGATCTTTAGCG+AGG + chr4_2:64945682-64945701 Msa0615460:five_prime_UTR 55.0%
TCCCAGATCTTTAGCGAGGG+TGG + chr4_2:64945686-64945705 Msa0615460:five_prime_UTR 55.0%
GTCCACCCTCGCTAAAGATC+TGG - chr4_2:64945691-64945710 None:intergenic 55.0%
! CGAGGGTGGACTTGACTACT+TGG + chr4_2:64945700-64945719 Msa0615460:five_prime_UTR 55.0%
! CGTATTGCTGGTGGACCTCT+TGG + chr4_2:64945806-64945825 Msa0615460:five_prime_UTR 55.0%
GTTGACCCACTTTACCCAGG+AGG + chr4_2:64945836-64945855 Msa0615460:five_prime_UTR 55.0%
AGCTGCCTCCTGGGTAAAGT+GGG - chr4_2:64945844-64945863 None:intergenic 55.0%
AAGCTGCCTCCTGGGTAAAG+TGG - chr4_2:64945845-64945864 None:intergenic 55.0%
ATGGGTCAAAGCTGCCTCCT+GGG - chr4_2:64945853-64945872 None:intergenic 55.0%
AATGGGTCAAAGCTGCCTCC+TGG - chr4_2:64945854-64945873 None:intergenic 55.0%
! AGGAGGCAGCTTTGACCCAT+TGG + chr4_2:64945853-64945872 Msa0615460:five_prime_UTR 55.0%
! GGAGGCAGCTTTGACCCATT+GGG + chr4_2:64945854-64945873 Msa0615460:five_prime_UTR 55.0%
TGTGACCGGAAAGGGACCTT+TGG + chr4_2:64945979-64945998 Msa0615460:five_prime_UTR 55.0%
! GCCCATGCGTTGTTGTTGAC+TGG - chr4_2:64946031-64946050 None:intergenic 55.0%
!! AGGTGTTGAGGTTGGATGGG+TGG + chr4_2:64946967-64946986 Msa0615460:CDS 55.0%
!! ACTGGCTTGCCAGCCAAGGT+TGG - chr4_2:64945314-64945333 None:intergenic 60.0%
!! CTTGACTGGCTTGCCAGCCA+AGG - chr4_2:64945318-64945337 None:intergenic 60.0%
TAGCCTCCTCAGGAAGCCCA+TGG + chr4_2:64945408-64945427 Msa0615460:five_prime_UTR 60.0%
GTACCATGGGCTTCCTGAGG+AGG - chr4_2:64945414-64945433 None:intergenic 60.0%
ACGGGGGCTCACCAGAGAAT+GGG - chr4_2:64945463-64945482 None:intergenic 60.0%
GAGCCCCCGTCTTACTTGAC+TGG + chr4_2:64945473-64945492 Msa0615460:five_prime_UTR 60.0%
GTGTCCCATCCGTAGTCACC+TGG - chr4_2:64945506-64945525 None:intergenic 60.0%
GACTACGGATGGGACACTGC+TGG + chr4_2:64945509-64945528 Msa0615460:five_prime_UTR 60.0%
! GTGGGCTATGTTGGGAGCCT+TGG + chr4_2:64945592-64945611 Msa0615460:five_prime_UTR 60.0%
GGTCGTCAGCTAGGCCCAAT+GGG - chr4_2:64945871-64945890 None:intergenic 60.0%
AAGCCTCTGGGTCGTCAGCT+AGG - chr4_2:64945880-64945899 None:intergenic 60.0%
!! ACTGGCTTGCCAGCCAAGGT+TGG - chr4_2:64945314-64945333 None:intergenic 60.0%
!! CTTGACTGGCTTGCCAGCCA+AGG - chr4_2:64945318-64945337 None:intergenic 60.0%
TAGCCTCCTCAGGAAGCCCA+TGG + chr4_2:64945408-64945427 Msa0615460:five_prime_UTR 60.0%
GTACCATGGGCTTCCTGAGG+AGG - chr4_2:64945414-64945433 None:intergenic 60.0%
ACGGGGGCTCACCAGAGAAT+GGG - chr4_2:64945463-64945482 None:intergenic 60.0%
GAGCCCCCGTCTTACTTGAC+TGG + chr4_2:64945473-64945492 Msa0615460:five_prime_UTR 60.0%
GTGTCCCATCCGTAGTCACC+TGG - chr4_2:64945506-64945525 None:intergenic 60.0%
GACTACGGATGGGACACTGC+TGG + chr4_2:64945509-64945528 Msa0615460:five_prime_UTR 60.0%
! GTGGGCTATGTTGGGAGCCT+TGG + chr4_2:64945592-64945611 Msa0615460:five_prime_UTR 60.0%
GGTCGTCAGCTAGGCCCAAT+GGG - chr4_2:64945871-64945890 None:intergenic 60.0%
AAGCCTCTGGGTCGTCAGCT+AGG - chr4_2:64945880-64945899 None:intergenic 60.0%
GCCGTACCATGGGCTTCCTG+AGG - chr4_2:64945417-64945436 None:intergenic 65.0%
CACGGTCTGGGCCGTACCAT+GGG - chr4_2:64945427-64945446 None:intergenic 65.0%
ACACGGTCTGGGCCGTACCA+TGG - chr4_2:64945428-64945447 None:intergenic 65.0%
GACGGGGGCTCACCAGAGAA+TGG - chr4_2:64945464-64945483 None:intergenic 65.0%
GGGTCGTCAGCTAGGCCCAA+TGG - chr4_2:64945872-64945891 None:intergenic 65.0%
GCCGTACCATGGGCTTCCTG+AGG - chr4_2:64945417-64945436 None:intergenic 65.0%
CACGGTCTGGGCCGTACCAT+GGG - chr4_2:64945427-64945446 None:intergenic 65.0%
ACACGGTCTGGGCCGTACCA+TGG - chr4_2:64945428-64945447 None:intergenic 65.0%
GACGGGGGCTCACCAGAGAA+TGG - chr4_2:64945464-64945483 None:intergenic 65.0%
GGGTCGTCAGCTAGGCCCAA+TGG - chr4_2:64945872-64945891 None:intergenic 65.0%
GGGCCTAGCTGACGACCCAG+AGG + chr4_2:64945874-64945893 Msa0615460:five_prime_UTR 70.0%
GGGCCTAGCTGACGACCCAG+AGG + chr4_2:64945874-64945893 Msa0615460:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 64945222 64947446 64945222 ID=Msa0615460;Name=Msa0615460
chr4_2 mRNA 64945222 64947446 64945222 ID=Msa0615460-mRNA-1;Parent=Msa0615460;Name=Msa0615460-mRNA-1;_AED=0.00;_eAED=0.00;_QI=1219|1|1|1|1|1|2|286|207
chr4_2 exon 64945222 64946479 64945222 ID=Msa0615460-mRNA-1:exon:18246;Parent=Msa0615460-mRNA-1
chr4_2 exon 64946576 64947446 64946576 ID=Msa0615460-mRNA-1:exon:18247;Parent=Msa0615460-mRNA-1
chr4_2 five_prime_UTR 64945222 64946440 64945222 ID=Msa0615460-mRNA-1:five_prime_utr;Parent=Msa0615460-mRNA-1
chr4_2 CDS 64946441 64946479 64946441 ID=Msa0615460-mRNA-1:cds;Parent=Msa0615460-mRNA-1
chr4_2 CDS 64946576 64947160 64946576 ID=Msa0615460-mRNA-1:cds;Parent=Msa0615460-mRNA-1
chr4_2 three_prime_UTR 64947161 64947446 64947161 ID=Msa0615460-mRNA-1:three_prime_utr;Parent=Msa0615460-mRNA-1
Gene Sequence

>Msa0615460

ATGTCTTCACATTCGAAATTCTTCTCATCGTTAAGACAGGTTGAAAAAAGGTTAAAATTAGAGAACACATCAACAACAAAAACAACAGAATCTGAACAAGTACAAGAAAGCAACGTTGTATCAACATTGAGTTCACCTTTGTTCCTCCAACAAAGTTGCAACCAAACATGCCCCACACAAGAAAACAGCGAACCTCCTCAACAATTCCTCTCAGTTTCTCAAGGATTCACACTGACCCATCAACACCCTTCTCAAATTACTACTCCTTCAGATGAAACTCAAGAAGAAGATGTTGATGAAATTGAAGGGTTAATGAAGCTATTAGGTGATTTTGAGGGTGATGAGGATGGTGGTGATTGTGATTCTTGTCATTGTGAAGGTGGGTTTTATTCCAAGATTGTTGGTGTGGAGGGACCAAAGTGTAAGAAAGAGGTGTTGAGGTTGGATGGGTGGATTAAGCATTTTTTGAATGATGGGGTGGAGAAGAAAGAGCCATTGAGATTGGCACATTTACTTTTAGGGAAAGCTGCTTTTATTTCTGGGGGTGCAAATAGTGGTTTTGGAGACTTGGATTTCCCTTCAACTATTCAAGAATTTCTTCATACTGATCCTCCCAGTAAATGA

Protein sequence

>Msa0615460

MSSHSKFFSSLRQVEKRLKLENTSTTKTTESEQVQESNVVSTLSSPLFLQQSCNQTCPTQENSEPPQQFLSVSQGFTLTHQHPSQITTPSDETQEEDVDEIEGLMKLLGDFEGDEDGGDCDSCHCEGGFYSKIVGVEGPKCKKEVLRLDGWIKHFLNDGVEKKEPLRLAHLLLGKAAFISGGANSGFGDLDFPSTIQEFLHTDPPSK*