AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0888520


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0888520 MtrunA17_Chr6g0476641 99.308 289 2 0 1 289 1 289 0.0 582
Msa0888520 MtrunA17_Chr4g0051941 48.352 273 114 9 9 274 2 254 9.35e-72 222
Msa0888520 MtrunA17_Chr6g0453151 55.024 209 85 5 71 274 116 320 1.54e-69 218
Msa0888520 MtrunA17_Chr6g0453141 55.024 209 85 5 71 274 49 253 5.17e-69 214
Msa0888520 MtrunA17_Chr6g0453181 47.826 276 116 8 4 274 1 253 7.73e-69 214
Msa0888520 MtrunA17_Chr5g0447531 55.502 209 84 5 71 274 49 253 6.95e-67 209
Msa0888520 MtrunA17_Chr6g0453161 46.520 273 120 8 7 274 269 520 4.69e-66 215
Msa0888520 MtrunA17_Chr6g0453161 54.545 209 86 5 71 274 51 255 2.11e-65 213
Msa0888520 MtrunA17_Chr2g0318521 49.590 244 107 7 42 274 14 252 8.06e-63 199
Msa0888520 MtrunA17_Chr1g0157481 43.590 234 116 4 57 276 93 324 2.26e-52 174
Msa0888520 MtrunA17_Chr6g0464511 43.498 223 83 6 57 274 16 200 8.67e-46 153
Msa0888520 MtrunA17_Chr6g0462031 40.625 192 102 5 91 279 56 238 3.15e-40 140
Msa0888520 MtrunA17_Chr5g0448421 37.102 283 125 12 23 279 19 274 7.52e-39 137
Msa0888520 MtrunA17_Chr3g0133901 38.318 214 94 6 91 282 68 265 1.46e-38 136
Msa0888520 MtrunA17_Chr5g0448411 37.102 283 123 12 23 279 19 272 1.32e-37 134
Msa0888520 MtrunA17_Chr4g0006181 33.992 253 106 8 75 282 111 347 5.68e-36 131
Msa0888520 MtrunA17_Chr3g0092091 38.424 203 101 5 91 282 63 252 5.26e-35 127
Msa0888520 MtrunA17_Chr8g0345631 38.140 215 96 7 74 270 61 256 1.18e-34 126
Msa0888520 MtrunA17_Chr2g0301081 35.586 222 112 7 74 280 60 265 1.30e-34 126
Msa0888520 MtrunA17_Chr6g0453171 60.465 86 32 1 191 274 1 86 1.04e-28 105
Msa0888520 MtrunA17_Chr3g0113311 33.486 218 91 5 91 264 67 274 7.54e-26 103
Msa0888520 MtrunA17_Chr2g0279001 30.412 194 86 6 91 252 73 249 9.77e-17 78.2
Msa0888520 MtrunA17_Chr2g0296081 51.389 72 31 2 210 281 36 103 9.47e-14 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0888520 AT4G10340.1 81.786 280 49 2 11 289 2 280 1.13e-151 426
Msa0888520 AT1G29930.1 48.375 277 115 9 4 274 1 255 2.96e-69 216
Msa0888520 AT1G29920.1 52.232 224 97 6 57 274 36 255 8.75e-69 214
Msa0888520 AT1G29910.1 52.232 224 97 6 57 274 36 255 8.75e-69 214
Msa0888520 AT2G34420.1 51.339 224 99 5 57 274 34 253 1.22e-67 211
Msa0888520 AT2G34430.1 51.121 223 99 5 58 274 36 254 3.57e-67 210
Msa0888520 AT2G05100.1 55.714 210 82 6 71 274 49 253 1.16e-64 204
Msa0888520 AT2G05070.1 55.714 210 82 6 71 274 49 253 1.28e-64 204
Msa0888520 AT3G27690.1 55.238 210 83 6 71 274 50 254 5.29e-64 202
Msa0888520 AT3G27690.2 55.238 210 83 6 71 274 82 286 5.89e-64 203
Msa0888520 AT5G54270.1 47.843 255 114 8 31 274 7 253 5.74e-63 199
Msa0888520 AT1G76570.1 42.963 270 132 7 28 280 62 326 6.01e-55 181
Msa0888520 AT2G05100.2 53.202 203 84 6 62 258 40 237 2.21e-53 176
Msa0888520 AT3G54890.1 43.229 192 97 6 91 279 55 237 5.62e-43 147
Msa0888520 AT1G45474.2 37.799 209 97 4 91 279 56 251 7.00e-38 134
Msa0888520 AT1G45474.1 37.799 209 97 4 91 279 56 251 7.00e-38 134
Msa0888520 AT3G08940.2 32.667 300 128 9 29 282 16 287 9.91e-37 132
Msa0888520 AT1G61520.3 37.500 264 113 11 42 279 33 270 9.98e-37 132
Msa0888520 AT1G61520.1 37.500 264 113 11 42 279 33 270 9.98e-37 132
Msa0888520 AT1G19150.1 35.683 227 109 7 74 282 63 270 1.12e-35 129
Msa0888520 AT3G47470.1 38.308 201 100 5 91 280 64 251 1.76e-35 128
Msa0888520 AT3G61470.1 39.070 215 94 7 74 270 50 245 3.43e-35 127
Msa0888520 AT5G01530.1 33.755 237 101 6 91 282 65 290 6.03e-34 125
Msa0888520 AT1G61520.2 41.627 209 89 9 97 279 14 215 1.14e-33 122
Msa0888520 AT3G54890.4 40.964 166 85 6 91 254 55 209 1.09e-29 112
Msa0888520 AT3G54890.2 37.173 191 76 6 91 279 55 203 1.27e-29 112
Msa0888520 AT2G40100.1 35.193 233 93 6 75 264 55 272 1.84e-29 113
Msa0888520 AT1G15820.1 30.964 197 81 6 91 252 70 246 2.96e-17 79.7
Msa0888520 AT3G54890.3 40.206 97 49 3 91 186 55 143 2.71e-16 75.1
Msa0888520 AT5G28450.1 49.315 73 35 2 200 270 89 161 1.16e-12 65.5

Find 110 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAATTTGGTTGAAATAA+TGG 0.215256 6_1:+53149768 None:intergenic
TTATTTCTGCCATTCATTTC+AGG 0.217929 6_1:+53149726 None:intergenic
AACTTGCTCACTGTCATTTC+TGG 0.224295 6_1:-53146158 Msa0888520:CDS
GTTGCTGAGGTTGTTCTCTT+AGG 0.265986 6_1:-53147043 Msa0888520:CDS
GAGGTGCTGCTTTCTTCTTT+TGG 0.282302 6_1:+53149279 None:intergenic
GTTGCACCACTGAATTTAAC+TGG 0.292364 6_1:+53149356 None:intergenic
CCTGAGGCCTTCAACAAATA+TGG 0.304749 6_1:-53147601 Msa0888520:CDS
TGTTAAGTTTGTTTCAAGTT+AGG 0.329599 6_1:+53145898 None:intergenic
ACATACTTGGCGAAGTCTTC+GGG 0.334071 6_1:+53148336 None:intergenic
ACCTTGAACCAAACTGCTTC+AGG 0.342619 6_1:+53147565 None:intergenic
AGCACCAAGCATTGCCCATC+TGG 0.347578 6_1:+53147639 None:intergenic
GGTGGTCCATTTGATCCATT+AGG 0.354018 6_1:-53146344 Msa0888520:CDS
GGATCATTTGCTAGCCCTAA+TGG 0.356867 6_1:+53146329 None:intergenic
GACATACTTGGCGAAGTCTT+CGG 0.362129 6_1:+53148335 None:intergenic
TGCTTTGCTAAGTTCTCAAC+TGG 0.363260 6_1:+53146203 None:intergenic
TTAAGAATTGCAGCTTGGTC+TGG 0.365861 6_1:+53146308 None:intergenic
CTATTCATGCACTAAAATTC+AGG 0.366419 6_1:+53146001 None:intergenic
ATGTGGTTAGATTCTGTGTT+TGG 0.368429 6_1:+53149676 None:intergenic
TGGGCAATGCTTGGTGCTGC+TGG 0.373653 6_1:-53147634 Msa0888520:CDS
AGCTATGGTTACGATCCTTT+TGG 0.377709 6_1:-53148372 Msa0888520:CDS
GGAGTAGCCACTTTCTGCTT+TGG 0.379363 6_1:+53149254 None:intergenic
CTTGCTATGTTTGCCATGCT+TGG 0.383198 6_1:-53146260 Msa0888520:CDS
CTTCTTGCCAGACGGTCTCT+TGG 0.386703 6_1:-53148555 Msa0888520:CDS
TCATGATCATGGTCATTGAT+TGG 0.390138 6_1:+53149575 None:intergenic
GTTAATTTCATGCATAAAAG+TGG 0.407909 6_1:+53145939 None:intergenic
AACAGCAACAATAAGATTGA+TGG 0.422149 6_1:+53147066 None:intergenic
GGCTTCTTGCTTAGACCAAA+AGG 0.435777 6_1:+53148357 None:intergenic
TCTACTGCAGCTGCTTCACT+TGG 0.436532 6_1:-53149401 Msa0888520:CDS
AAGATGTGTAATCCAATGTA+TGG 0.437475 6_1:+53149607 None:intergenic
GCTAGCCCTAATGGATCAAA+TGG 0.438621 6_1:+53146338 None:intergenic
CTTGGAATGTCTGAAATGCT+TGG 0.439282 6_1:-53149383 Msa0888520:CDS
GCCACTTTCTGCTTTGGTGG+AGG 0.447166 6_1:+53149260 None:intergenic
TCCTGAAGCAGTTTGGTTCA+AGG 0.447410 6_1:-53147566 Msa0888520:intron
ACTGTGGTCCTGAAGCAGTT+TGG 0.450252 6_1:-53147573 Msa0888520:CDS
GTTGGCTCCATATTTGTTGA+AGG 0.451119 6_1:+53147594 None:intergenic
CCATATTTGTTGAAGGCCTC+AGG 0.453560 6_1:+53147601 None:intergenic
TTCATCCAAGCTTATGTCAC+AGG 0.458060 6_1:-53146233 Msa0888520:CDS
GTGGTCCATTTGATCCATTA+GGG 0.463667 6_1:-53146343 Msa0888520:CDS
GTATTGTACACATTCAAGAT+TGG 0.467355 6_1:+53146080 None:intergenic
CAGGAGCTCTTCTTCTCGAT+GGG 0.468003 6_1:-53147120 Msa0888520:CDS
ACTATATGATGCATGGTTAG+TGG 0.475400 6_1:+53149530 None:intergenic
GTAGCCACTTTCTGCTTTGG+TGG 0.482184 6_1:+53149257 None:intergenic
TTGGCGAGTTCCTCGCTGGC+CGG 0.484863 6_1:+53149233 None:intergenic
AAGCATCTCAGTGATCCTTT+CGG 0.485311 6_1:-53146185 Msa0888520:CDS
ATCCAATGTATGGATTTGAT+TGG 0.494851 6_1:+53149617 None:intergenic
AACAATAAGATTGATGGGGA+TGG 0.497972 6_1:+53147072 None:intergenic
CAAGCTTATGTCACAGGAGA+AGG 0.507636 6_1:-53146227 Msa0888520:CDS
ATGGACTAATGCAGATATCA+AGG 0.508883 6_1:-53147679 Msa0888520:intron
GACTTCTCCAGTCAAGTACT+CGG 0.509895 6_1:+53148517 None:intergenic
GTAGAAATCACATACTCTCC+AGG 0.510743 6_1:+53148494 None:intergenic
AAACAAGAACCTGAAATGAA+TGG 0.510971 6_1:-53149735 Msa0888520:five_prime_UTR
AGCTGCAGTAGAAGCAGCAA+TGG 0.510980 6_1:+53149412 None:intergenic
ACAGGAGCTCTTCTTCTCGA+TGG 0.512365 6_1:-53147121 Msa0888520:CDS
GATCTGTCCAAGAGACCGTC+TGG 0.514379 6_1:+53148548 None:intergenic
CCACGTCAGATTCATGATCA+TGG 0.517407 6_1:+53149564 None:intergenic
GGCAAGAAGATCCTTCTGTC+CGG 0.520057 6_1:+53148569 None:intergenic
TGGTGGCAGGTCCGGACAGA+AGG 0.520994 6_1:-53148580 Msa0888520:intron
GTAGATGGAGTTGAAGAAGA+AGG 0.525039 6_1:+53149323 None:intergenic
CATTTCTGGAAATGTTGAGA+GGG 0.525273 6_1:-53146144 Msa0888520:CDS
ACAGCAACAATAAGATTGAT+GGG 0.526075 6_1:+53147067 None:intergenic
GAGGAACTCGCCAAGTGGTA+TGG 0.528132 6_1:-53149224 Msa0888520:intron
AACCAATCAAATCCATACAT+TGG 0.532544 6_1:-53149619 Msa0888520:five_prime_UTR
GCTGAGGTTGTTCTCTTAGG+AGG 0.532866 6_1:-53147040 Msa0888520:CDS
CTTCTCCTGTGACATAAGCT+TGG 0.533061 6_1:+53146228 None:intergenic
GAGATCCCCGAGTACTTGAC+TGG 0.539762 6_1:-53148524 Msa0888520:CDS
TAATATACATACCAATCCAT+TGG 0.541578 6_1:+53146997 None:intergenic
AGCTGCAATTCTTAAAGTGA+AGG 0.541774 6_1:-53146300 Msa0888520:CDS
TATTGTTGCTGTTGTTGCTG+AGG 0.542752 6_1:-53147056 Msa0888520:CDS
ACCTCCACCAAAGCAGAAAG+TGG 0.545715 6_1:-53149261 Msa0888520:CDS
ATGAGTTGATTCATGCCAGA+TGG 0.547726 6_1:-53147654 Msa0888520:CDS
ACTAAAATTCAGGAGTGAGT+TGG 0.548902 6_1:+53146011 None:intergenic
CTACAGAATTACCAATGGAT+TGG 0.549186 6_1:-53147008 Msa0888520:intron
TCACTTTAAGAATTGCAGCT+TGG 0.550295 6_1:+53146303 None:intergenic
AAAGTGAAGGAAATTAAGAA+TGG 0.552214 6_1:-53146287 Msa0888520:CDS
ACAATAAGATTGATGGGGAT+GGG 0.552443 6_1:+53147073 None:intergenic
AATGGATCAAATGGACCACC+TGG 0.553521 6_1:+53146347 None:intergenic
TACTTGACTGGAGAAGTCCC+TGG 0.555966 6_1:-53148512 Msa0888520:CDS
CATGCCAGATGGGCAATGCT+TGG 0.556994 6_1:-53147643 Msa0888520:CDS
AACTGCTTCAGGACCACAGT+TGG 0.560727 6_1:+53147576 None:intergenic
TGATTGACTCATCACAGAGT+TGG 0.561950 6_1:+53146119 None:intergenic
ACTTCTCCAGTCAAGTACTC+GGG 0.566093 6_1:+53148518 None:intergenic
TGAGTTGATTCATGCCAGAT+GGG 0.567819 6_1:-53147653 Msa0888520:CDS
AAAGCAGAAAGTGGCTACTC+CGG 0.571671 6_1:-53149252 Msa0888520:CDS
GTAGTTTACTATATGATGCA+TGG 0.580083 6_1:+53149523 None:intergenic
TCATTTCTGGAAATGTTGAG+AGG 0.582692 6_1:-53146145 Msa0888520:CDS
GGAAATCCAGTTAAATTCAG+TGG 0.588045 6_1:-53149362 Msa0888520:CDS
TTAAATTCAGTGGTGCAACT+AGG 0.588240 6_1:-53149352 Msa0888520:CDS
TGCTGGATTCATCATTCCTG+AGG 0.589247 6_1:-53147617 Msa0888520:CDS
GCAGCAATGGAAGCCATGGT+TGG 0.590836 6_1:+53149425 None:intergenic
AGAAGCAGCAATGGAAGCCA+TGG 0.592749 6_1:+53149421 None:intergenic
AAGATTCCTAAAACCAACCA+TGG 0.597630 6_1:-53149438 Msa0888520:exon
TGGTGACTTACCATACCACT+TGG 0.598115 6_1:+53149214 None:intergenic
GTGAGCAAGTTGTTTCCGAA+AGG 0.604371 6_1:+53146170 None:intergenic
AACAAATATGGAGCCAACTG+TGG 0.610263 6_1:-53147589 Msa0888520:CDS
TAGAAATCACATACTCTCCA+GGG 0.613959 6_1:+53148495 None:intergenic
AGAAGGATCTTCTTGCCAGA+CGG 0.619123 6_1:-53148563 Msa0888520:CDS
TTCACAATATGAAGATAGAG+AGG 0.626189 6_1:+53149501 None:intergenic
CTTCTCCAGTCAAGTACTCG+GGG 0.643314 6_1:+53148519 None:intergenic
ATGAGATGATGCAGCTGATG+TGG 0.649478 6_1:+53149659 None:intergenic
GAGTACTACAGAATTACCAA+TGG 0.652754 6_1:-53147013 Msa0888520:CDS
TTGGATGAAGAAACCAAGCA+TGG 0.655601 6_1:+53146247 None:intergenic
GGAGCTCTTCTTCTCGATGG+GGG 0.659081 6_1:-53147118 Msa0888520:CDS
AGGAGCTCTTCTTCTCGATG+GGG 0.660958 6_1:-53147119 Msa0888520:CDS
TTGGAAGACAAGTTTCACCC+AGG 0.666043 6_1:-53146365 Msa0888520:CDS
AGTGGCTACTCCGGCCAGCG+AGG 0.669111 6_1:-53149243 Msa0888520:CDS
CCAGCGAGGAACTCGCCAAG+TGG 0.682354 6_1:-53149229 Msa0888520:CDS
CAGCAACAATAAGATTGATG+GGG 0.688191 6_1:+53147068 None:intergenic
CCATGATCATGAATCTGACG+TGG 0.690142 6_1:-53149564 Msa0888520:five_prime_UTR
ATGGATCAAATGGACCACCT+GGG 0.698455 6_1:+53146348 None:intergenic
GAAGACAAGTTTCACCCAGG+TGG 0.699065 6_1:-53146362 Msa0888520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTGTAATTTTTTGAAAA+TGG - chr6_1:53146710-53146729 Msa0888520:intron 10.0%
!! TAAAACAATAATTTAATGTA+TGG - chr6_1:53147668-53147687 Msa0888520:CDS 10.0%
!!! TTTTTCATTTTCTTTCAATT+TGG + chr6_1:53145900-53145919 None:intergenic 15.0%
!!! AATCAATGCATTTTTTTTTT+TGG + chr6_1:53147001-53147020 None:intergenic 15.0%
!!! CAACTTTTTTATTGAAATTT+TGG - chr6_1:53147221-53147240 Msa0888520:intron 15.0%
!!! TTGTTTTAAAAAACAAAACT+TGG + chr6_1:53147656-53147675 None:intergenic 15.0%
!!! TTTTATGATTTAGAAATTGA+AGG - chr6_1:53147808-53147827 Msa0888520:intron 15.0%
!! CTCAATATAAAAACATAATA+TGG + chr6_1:53148349-53148368 None:intergenic 15.0%
!! TTTCAATTTGGTTGAAATAA+TGG + chr6_1:53145888-53145907 None:intergenic 20.0%
!! CATTGTATAAAATTCTCTTA+AGG - chr6_1:53146498-53146517 Msa0888520:intron 20.0%
!! TAAAATTCTCTTAAGGTATA+AGG - chr6_1:53146505-53146524 Msa0888520:intron 20.0%
!!! TTTTGGTTCTTTTGATAATT+TGG - chr6_1:53147053-53147072 Msa0888520:CDS 20.0%
!!! TGGAAAATCTGATTTTATTT+AGG - chr6_1:53147613-53147632 Msa0888520:CDS 20.0%
!!! GGAAAATCTGATTTTATTTA+GGG - chr6_1:53147614-53147633 Msa0888520:CDS 20.0%
!! ACAAAACTTGGAATAAAAAT+TGG + chr6_1:53147644-53147663 None:intergenic 20.0%
!! TTATGTATGAAACTTAACAA+AGG - chr6_1:53148161-53148180 Msa0888520:intron 20.0%
!!! TGTTAGTAGGTTTTTATATT+AGG - chr6_1:53148271-53148290 Msa0888520:intron 20.0%
!! ATAATATGGTATCAATGTAT+TGG + chr6_1:53148335-53148354 None:intergenic 20.0%
!! AATGATGCAATCAAAAATAT+TGG + chr6_1:53148464-53148483 None:intergenic 20.0%
!! TAAATTCTAATCACAATGAT+AGG + chr6_1:53148686-53148705 None:intergenic 20.0%
!!! ATCGGTTTTTTTGTATAAAA+TGG + chr6_1:53148734-53148753 None:intergenic 20.0%
!! TATTAAACTCTTTATGCTAA+AGG - chr6_1:53148866-53148885 Msa0888520:intron 20.0%
!!! AACATGTTTTATCTGTTTCT+TGG + chr6_1:53145955-53145974 None:intergenic 25.0%
!! TAAGACGAGATTTTAAATTG+TGG - chr6_1:53146638-53146657 Msa0888520:intron 25.0%
!!! ATTTTGGCAAAAACTATAGT+AGG - chr6_1:53146814-53146833 Msa0888520:intron 25.0%
!! ACTATAGTTGCTAAAACTTT+TGG - chr6_1:53147036-53147055 Msa0888520:CDS 25.0%
! TTGTAAGATTTAGACATACT+TGG + chr6_1:53147333-53147352 None:intergenic 25.0%
! AACGAAAATAAGGAGATAAA+AGG + chr6_1:53147435-53147454 None:intergenic 25.0%
!!! TTATTTTTGCTGATATGTCA+GGG + chr6_1:53147739-53147758 None:intergenic 25.0%
! AAAATAAGTCTCAAATTCAG+TGG - chr6_1:53147752-53147771 Msa0888520:intron 25.0%
! TTCATTGAAACTTTGTTAGT+AGG - chr6_1:53148258-53148277 Msa0888520:intron 25.0%
! TAATATACATACCAATCCAT+TGG + chr6_1:53148659-53148678 None:intergenic 25.0%
! TCAAATAAGTCAATCCAAAA+AGG + chr6_1:53148927-53148946 None:intergenic 25.0%
! TGAAAACAGCATTAAGATTT+AGG - chr6_1:53148995-53149014 Msa0888520:intron 25.0%
!! ATTAAGTTGTTTATCGAAGT+AGG - chr6_1:53149181-53149200 Msa0888520:intron 25.0%
! AAAGTGAAGGAAATTAAGAA+TGG - chr6_1:53149366-53149385 Msa0888520:CDS 25.0%
! ATCTCACTTTGACATTATTA+AGG - chr6_1:53149596-53149615 Msa0888520:five_prime_UTR 25.0%
!!! AGGCATTTTGCTTTATTTAA+TGG - chr6_1:53149616-53149635 Msa0888520:five_prime_UTR 25.0%
!!! ATTTTAGTGCATGAATAGTT+TGG - chr6_1:53149657-53149676 Msa0888520:five_prime_UTR 25.0%
! GTTAATTTCATGCATAAAAG+TGG + chr6_1:53149717-53149736 None:intergenic 25.0%
!!! TGTTAAGTTTGTTTCAAGTT+AGG + chr6_1:53149758-53149777 None:intergenic 25.0%
AAACAAGAACCTGAAATGAA+TGG - chr6_1:53145918-53145937 Msa0888520:three_prime_UTR 30.0%
!! TTATTTCTGCCATTCATTTC+AGG + chr6_1:53145930-53145949 None:intergenic 30.0%
AACCAATCAAATCCATACAT+TGG - chr6_1:53146034-53146053 Msa0888520:intron 30.0%
ATCCAATGTATGGATTTGAT+TGG + chr6_1:53146039-53146058 None:intergenic 30.0%
AAGATGTGTAATCCAATGTA+TGG + chr6_1:53146049-53146068 None:intergenic 30.0%
GTAGTTTACTATATGATGCA+TGG + chr6_1:53146133-53146152 None:intergenic 30.0%
TTCACAATATGAAGATAGAG+AGG + chr6_1:53146155-53146174 None:intergenic 30.0%
ACATGAGAACAAAACATTGT+TGG + chr6_1:53146462-53146481 None:intergenic 30.0%
ATGCTTAGTATTGCATAGAA+TGG - chr6_1:53146671-53146690 Msa0888520:intron 30.0%
! ATTGACTCTAATTTGAAGCT+AGG + chr6_1:53146951-53146970 None:intergenic 30.0%
!! TGGTTCTTTTGATAATTTGG+TGG - chr6_1:53147056-53147075 Msa0888520:CDS 30.0%
AGAGTATGTGATTTCTACTT+TGG - chr6_1:53147164-53147183 Msa0888520:intron 30.0%
ATTGAGAACATGAGTTAAAG+GGG + chr6_1:53147192-53147211 None:intergenic 30.0%
GATTGAGAACATGAGTTAAA+GGG + chr6_1:53147193-53147212 None:intergenic 30.0%
TGATTGAGAACATGAGTTAA+AGG + chr6_1:53147194-53147213 None:intergenic 30.0%
AAAACAAACCTAAAATGCAG+TGG + chr6_1:53147536-53147555 None:intergenic 30.0%
! GCAATGACAATGCATATTTT+TGG - chr6_1:53147593-53147612 Msa0888520:CDS 30.0%
!!! CTTATTTTTGCTGATATGTC+AGG + chr6_1:53147740-53147759 None:intergenic 30.0%
AATCGTGAATCAACGAAAAT+AGG - chr6_1:53147836-53147855 Msa0888520:intron 30.0%
CTTATGTTACCTTAATTGTG+TGG - chr6_1:53147930-53147949 Msa0888520:intron 30.0%
TAATAAAGTTGACATTGCGA+CGG + chr6_1:53148132-53148151 None:intergenic 30.0%
GGGTCAACTACATAAATTAA+AGG + chr6_1:53148216-53148235 None:intergenic 30.0%
!! GAGTCTTATTCTACTATGTA+GGG + chr6_1:53148236-53148255 None:intergenic 30.0%
CTACATAGTAGAATAAGACT+CGG - chr6_1:53148235-53148254 Msa0888520:intron 30.0%
ATTGATTAAAGATAGAGCCT+CGG + chr6_1:53148297-53148316 None:intergenic 30.0%
TCTTTAATCAATGTGGAACT+TGG - chr6_1:53148305-53148324 Msa0888520:intron 30.0%
AAAGAATAGCATCTACAAGT+CGG + chr6_1:53148392-53148411 None:intergenic 30.0%
!! TTTTTCAAACGAATGTAGAC+AGG - chr6_1:53148514-53148533 Msa0888520:CDS 30.0%
ACAGCAACAATAAGATTGAT+GGG + chr6_1:53148589-53148608 None:intergenic 30.0%
AACAGCAACAATAAGATTGA+TGG + chr6_1:53148590-53148609 None:intergenic 30.0%
!!! GATATATCTGTCTGGTTTTT+TGG - chr6_1:53148770-53148789 Msa0888520:intron 30.0%
!! AATCCAAAAAGGCTCTAAAA+TGG + chr6_1:53148916-53148935 None:intergenic 30.0%
AATAAGCTGAAAACAGCTTA+CGG + chr6_1:53149027-53149046 None:intergenic 30.0%
! ATTTACCACCTATTTCTTTC+AGG - chr6_1:53149263-53149282 Msa0888520:CDS 30.0%
TTCCAATTCCTGAAAGAAAT+AGG + chr6_1:53149274-53149293 None:intergenic 30.0%
GTATTGTACACATTCAAGAT+TGG + chr6_1:53149576-53149595 None:intergenic 30.0%
CTATTCATGCACTAAAATTC+AGG + chr6_1:53149655-53149674 None:intergenic 30.0%
ATGTGGTTAGATTCTGTGTT+TGG + chr6_1:53145980-53145999 None:intergenic 35.0%
TCATGATCATGGTCATTGAT+TGG + chr6_1:53146081-53146100 None:intergenic 35.0%
ACTATATGATGCATGGTTAG+TGG + chr6_1:53146126-53146145 None:intergenic 35.0%
AAGATTCCTAAAACCAACCA+TGG - chr6_1:53146215-53146234 Msa0888520:CDS 35.0%
GGAAATCCAGTTAAATTCAG+TGG - chr6_1:53146291-53146310 Msa0888520:CDS 35.0%
TTAAATTCAGTGGTGCAACT+AGG - chr6_1:53146301-53146320 Msa0888520:CDS 35.0%
!! GAAAAGAGCAACAGTTTTGA+AGG + chr6_1:53146355-53146374 None:intergenic 35.0%
AGTGCATGTTTGAATTATCG+CGG - chr6_1:53146763-53146782 Msa0888520:intron 35.0%
TTTACGAACGGTTGGATTAA+TGG + chr6_1:53146885-53146904 None:intergenic 35.0%
AGTTGCGTAGAAATCATGTT+TGG - chr6_1:53146910-53146929 Msa0888520:intron 35.0%
!! TCTTTTGATAATTTGGTGGC+AGG - chr6_1:53147060-53147079 Msa0888520:CDS 35.0%
TAGAAATCACATACTCTCCA+GGG + chr6_1:53147161-53147180 None:intergenic 35.0%
ATCGTCGATCAACGAAAATA+AGG + chr6_1:53147445-53147464 None:intergenic 35.0%
! TTTTCGTTGATCGACGATTT+TGG - chr6_1:53147447-53147466 Msa0888520:intron 35.0%
! TTTCCTTACCACTGCATTTT+AGG - chr6_1:53147525-53147544 Msa0888520:intron 35.0%
AAACCTAAAATGCAGTGGTA+AGG + chr6_1:53147531-53147550 None:intergenic 35.0%
ATAAGTCTCAAATTCAGTGG+TGG - chr6_1:53147755-53147774 Msa0888520:intron 35.0%
ATAGCATTGCCACACAATTA+AGG + chr6_1:53147942-53147961 None:intergenic 35.0%
TTAATTGTGTGGCAATGCTA+TGG - chr6_1:53147941-53147960 Msa0888520:intron 35.0%
ATGCTATGGTGAATGATTGA+TGG - chr6_1:53147955-53147974 Msa0888520:intron 35.0%
! ATGGACTAATGCAGATATCA+AGG - chr6_1:53147974-53147993 Msa0888520:intron 35.0%
!! CGAGTCTTATTCTACTATGT+AGG + chr6_1:53148237-53148256 None:intergenic 35.0%
! TAGGTTTTTATATTAGGCCG+AGG - chr6_1:53148277-53148296 Msa0888520:intron 35.0%
GGCTCTATCTTTAATCAATG+TGG - chr6_1:53148298-53148317 Msa0888520:intron 35.0%
!! ATCTACAAGTCGGTTTTGTA+AGG + chr6_1:53148382-53148401 None:intergenic 35.0%
GTCTGTATCTTCAATCAATG+TGG - chr6_1:53148426-53148445 Msa0888520:intron 35.0%
TCTTCAATCAATGTGGAACT+TGG - chr6_1:53148433-53148452 Msa0888520:intron 35.0%
ACAATAAGATTGATGGGGAT+GGG + chr6_1:53148583-53148602 None:intergenic 35.0%
AACAATAAGATTGATGGGGA+TGG + chr6_1:53148584-53148603 None:intergenic 35.0%
CAGCAACAATAAGATTGATG+GGG + chr6_1:53148588-53148607 None:intergenic 35.0%
GAGTACTACAGAATTACCAA+TGG - chr6_1:53148640-53148659 Msa0888520:intron 35.0%
CTACAGAATTACCAATGGAT+TGG - chr6_1:53148645-53148664 Msa0888520:intron 35.0%
!! AGGCTCTAAAATGGTTCATT+TGG + chr6_1:53148907-53148926 None:intergenic 35.0%
!!! GAACCATTTTAGAGCCTTTT+TGG - chr6_1:53148910-53148929 Msa0888520:intron 35.0%
CAATTCCTGAAAGAAATAGG+TGG + chr6_1:53149271-53149290 None:intergenic 35.0%
! CACCTATTTCTTTCAGGAAT+TGG - chr6_1:53149269-53149288 Msa0888520:CDS 35.0%
! TCACTTTAAGAATTGCAGCT+TGG + chr6_1:53149353-53149372 None:intergenic 35.0%
AGCTGCAATTCTTAAAGTGA+AGG - chr6_1:53149353-53149372 Msa0888520:CDS 35.0%
! TCATTTCTGGAAATGTTGAG+AGG - chr6_1:53149508-53149527 Msa0888520:five_prime_UTR 35.0%
! CATTTCTGGAAATGTTGAGA+GGG - chr6_1:53149509-53149528 Msa0888520:five_prime_UTR 35.0%
ACTAAAATTCAGGAGTGAGT+TGG + chr6_1:53149645-53149664 None:intergenic 35.0%
! CTTGGAATGTCTGAAATGCT+TGG - chr6_1:53146270-53146289 Msa0888520:CDS 40.0%
GTTGCACCACTGAATTTAAC+TGG + chr6_1:53146300-53146319 None:intergenic 40.0%
GTAGATGGAGTTGAAGAAGA+AGG + chr6_1:53146333-53146352 None:intergenic 40.0%
!!! GCAACAGTTTTGAAGGTAGA+TGG + chr6_1:53146348-53146367 None:intergenic 40.0%
TTGAATTATCGCGGTGAGTT+TGG - chr6_1:53146772-53146791 Msa0888520:intron 40.0%
! AATCACAGCGTGTGGTATTT+TGG - chr6_1:53146798-53146817 Msa0888520:intron 40.0%
GGTTGGATTAATGGTGAGTT+AGG + chr6_1:53146876-53146895 None:intergenic 40.0%
ACTCTTTCTTTACGAACGGT+TGG + chr6_1:53146893-53146912 None:intergenic 40.0%
CGCAACTCTTTCTTTACGAA+CGG + chr6_1:53146897-53146916 None:intergenic 40.0%
TGCGTAGAAATCATGTTTGG+AGG - chr6_1:53146913-53146932 Msa0888520:intron 40.0%
GTAGAAATCACATACTCTCC+AGG + chr6_1:53147162-53147181 None:intergenic 40.0%
TATGTGTGTCTATGCAGCTA+TGG - chr6_1:53147266-53147285 Msa0888520:intron 40.0%
! AGCTATGGTTACGATCCTTT+TGG - chr6_1:53147281-53147300 Msa0888520:intron 40.0%
!! ATGAGTTGATTCATGCCAGA+TGG - chr6_1:53147999-53148018 Msa0888520:intron 40.0%
!! TGAGTTGATTCATGCCAGAT+GGG - chr6_1:53148000-53148019 Msa0888520:intron 40.0%
! GTTGGCTCCATATTTGTTGA+AGG + chr6_1:53148062-53148081 None:intergenic 40.0%
AACAAATATGGAGCCAACTG+TGG - chr6_1:53148064-53148083 Msa0888520:intron 40.0%
! TCAAGGTATGCAAGCTCTAA+CGG - chr6_1:53148104-53148123 Msa0888520:intron 40.0%
! TATTGTTGCTGTTGTTGCTG+AGG - chr6_1:53148597-53148616 Msa0888520:intron 40.0%
TCCACACAGTGAGATATGAT+CGG + chr6_1:53148752-53148771 None:intergenic 40.0%
ACTGTGTGGATATATCTGTC+TGG - chr6_1:53148762-53148781 Msa0888520:intron 40.0%
GTGGTCCATTTGATCCATTA+GGG - chr6_1:53149310-53149329 Msa0888520:CDS 40.0%
TTAAGAATTGCAGCTTGGTC+TGG + chr6_1:53149348-53149367 None:intergenic 40.0%
TTGGATGAAGAAACCAAGCA+TGG + chr6_1:53149409-53149428 None:intergenic 40.0%
TTCATCCAAGCTTATGTCAC+AGG - chr6_1:53149420-53149439 Msa0888520:CDS 40.0%
TGCTTTGCTAAGTTCTCAAC+TGG + chr6_1:53149453-53149472 None:intergenic 40.0%
AAGCATCTCAGTGATCCTTT+CGG - chr6_1:53149468-53149487 Msa0888520:five_prime_UTR 40.0%
! AACTTGCTCACTGTCATTTC+TGG - chr6_1:53149495-53149514 Msa0888520:five_prime_UTR 40.0%
! TGATTGACTCATCACAGAGT+TGG + chr6_1:53149537-53149556 None:intergenic 40.0%
ATGAGATGATGCAGCTGATG+TGG + chr6_1:53145997-53146016 None:intergenic 45.0%
CCACGTCAGATTCATGATCA+TGG + chr6_1:53146092-53146111 None:intergenic 45.0%
CCATGATCATGAATCTGACG+TGG - chr6_1:53146089-53146108 Msa0888520:three_prime_UTR 45.0%
!!! TGGAAGCCATGGTTGGTTTT+AGG + chr6_1:53146224-53146243 None:intergenic 45.0%
!!! GAGGTGCTGCTTTCTTCTTT+TGG + chr6_1:53146377-53146396 None:intergenic 45.0%
AAAGCAGAAAGTGGCTACTC+CGG - chr6_1:53146401-53146420 Msa0888520:intron 45.0%
TGGTGACTTACCATACCACT+TGG + chr6_1:53146442-53146461 None:intergenic 45.0%
TTTGGAAGAATCACAGCGTG+TGG - chr6_1:53146790-53146809 Msa0888520:intron 45.0%
TGAGTTAGGCAGAATCAAGG+TGG + chr6_1:53146862-53146881 None:intergenic 45.0%
TGGTGAGTTAGGCAGAATCA+AGG + chr6_1:53146865-53146884 None:intergenic 45.0%
! TGATAATTTGGTGGCAGGTC+CGG - chr6_1:53147065-53147084 Msa0888520:CDS 45.0%
AGAAGGATCTTCTTGCCAGA+CGG - chr6_1:53147090-53147109 Msa0888520:CDS 45.0%
ACTTCTCCAGTCAAGTACTC+GGG + chr6_1:53147138-53147157 None:intergenic 45.0%
GACTTCTCCAGTCAAGTACT+CGG + chr6_1:53147139-53147158 None:intergenic 45.0%
GGCTTCTTGCTTAGACCAAA+AGG + chr6_1:53147299-53147318 None:intergenic 45.0%
ACATACTTGGCGAAGTCTTC+GGG + chr6_1:53147320-53147339 None:intergenic 45.0%
GACATACTTGGCGAAGTCTT+CGG + chr6_1:53147321-53147340 None:intergenic 45.0%
TGCTGGATTCATCATTCCTG+AGG - chr6_1:53148036-53148055 Msa0888520:intron 45.0%
! CCATATTTGTTGAAGGCCTC+AGG + chr6_1:53148055-53148074 None:intergenic 45.0%
CCTGAGGCCTTCAACAAATA+TGG - chr6_1:53148052-53148071 Msa0888520:intron 45.0%
! TCCTGAAGCAGTTTGGTTCA+AGG - chr6_1:53148087-53148106 Msa0888520:intron 45.0%
ACCTTGAACCAAACTGCTTC+AGG + chr6_1:53148091-53148110 None:intergenic 45.0%
GTTGCTGAGGTTGTTCTCTT+AGG - chr6_1:53148610-53148629 Msa0888520:intron 45.0%
ACCGATCATATCTCACTGTG+TGG - chr6_1:53148748-53148767 Msa0888520:intron 45.0%
TTGGAAGACAAGTTTCACCC+AGG - chr6_1:53149288-53149307 Msa0888520:CDS 45.0%
ATGGATCAAATGGACCACCT+GGG + chr6_1:53149308-53149327 None:intergenic 45.0%
AATGGATCAAATGGACCACC+TGG + chr6_1:53149309-53149328 None:intergenic 45.0%
GGTGGTCCATTTGATCCATT+AGG - chr6_1:53149309-53149328 Msa0888520:CDS 45.0%
! GCTAGCCCTAATGGATCAAA+TGG + chr6_1:53149318-53149337 None:intergenic 45.0%
! GGATCATTTGCTAGCCCTAA+TGG + chr6_1:53149327-53149346 None:intergenic 45.0%
! CTTGCTATGTTTGCCATGCT+TGG - chr6_1:53149393-53149412 Msa0888520:CDS 45.0%
CTTCTCCTGTGACATAAGCT+TGG + chr6_1:53149428-53149447 None:intergenic 45.0%
CAAGCTTATGTCACAGGAGA+AGG - chr6_1:53149426-53149445 Msa0888520:exon 45.0%
! GTGAGCAAGTTGTTTCCGAA+AGG + chr6_1:53149486-53149505 None:intergenic 45.0%
AGAAGCAGCAATGGAAGCCA+TGG + chr6_1:53146235-53146254 None:intergenic 50.0%
AGCTGCAGTAGAAGCAGCAA+TGG + chr6_1:53146244-53146263 None:intergenic 50.0%
TCTACTGCAGCTGCTTCACT+TGG - chr6_1:53146252-53146271 Msa0888520:CDS 50.0%
ACCTCCACCAAAGCAGAAAG+TGG - chr6_1:53146392-53146411 Msa0888520:intron 50.0%
! GTAGCCACTTTCTGCTTTGG+TGG + chr6_1:53146399-53146418 None:intergenic 50.0%
! GGAGTAGCCACTTTCTGCTT+TGG + chr6_1:53146402-53146421 None:intergenic 50.0%
GGCAAGAAGATCCTTCTGTC+CGG + chr6_1:53147087-53147106 None:intergenic 50.0%
CTTCTCCAGTCAAGTACTCG+GGG + chr6_1:53147137-53147156 None:intergenic 50.0%
TACTTGACTGGAGAAGTCCC+TGG - chr6_1:53147141-53147160 Msa0888520:intron 50.0%
ATGTCAGGGTGATGTGGCAT+CGG + chr6_1:53147725-53147744 None:intergenic 50.0%
GCTGATATGTCAGGGTGATG+TGG + chr6_1:53147731-53147750 None:intergenic 50.0%
AACTGCTTCAGGACCACAGT+TGG + chr6_1:53148080-53148099 None:intergenic 50.0%
ACTGTGGTCCTGAAGCAGTT+TGG - chr6_1:53148080-53148099 Msa0888520:intron 50.0%
ACAGGAGCTCTTCTTCTCGA+TGG - chr6_1:53148532-53148551 Msa0888520:CDS 50.0%
CAGGAGCTCTTCTTCTCGAT+GGG - chr6_1:53148533-53148552 Msa0888520:CDS 50.0%
AGGAGCTCTTCTTCTCGATG+GGG - chr6_1:53148534-53148553 Msa0888520:CDS 50.0%
! GGGGGTACGTTGAACTACTT+CGG - chr6_1:53148553-53148572 Msa0888520:CDS 50.0%
GCTGAGGTTGTTCTCTTAGG+AGG - chr6_1:53148613-53148632 Msa0888520:intron 50.0%
CTAACCTCGAACACTAGCAC+AGG + chr6_1:53148971-53148990 None:intergenic 50.0%
GAAGACAAGTTTCACCCAGG+TGG - chr6_1:53149291-53149310 Msa0888520:CDS 50.0%
GCAGCAATGGAAGCCATGGT+TGG + chr6_1:53146231-53146250 None:intergenic 55.0%
! GCCACTTTCTGCTTTGGTGG+AGG + chr6_1:53146396-53146415 None:intergenic 55.0%
GAGGAACTCGCCAAGTGGTA+TGG - chr6_1:53146429-53146448 Msa0888520:intron 55.0%
CTTCTTGCCAGACGGTCTCT+TGG - chr6_1:53147098-53147117 Msa0888520:CDS 55.0%
GATCTGTCCAAGAGACCGTC+TGG + chr6_1:53147108-53147127 None:intergenic 55.0%
GAGATCCCCGAGTACTTGAC+TGG - chr6_1:53147129-53147148 Msa0888520:intron 55.0%
CATGCCAGATGGGCAATGCT+TGG - chr6_1:53148010-53148029 Msa0888520:intron 55.0%
! AGCACCAAGCATTGCCCATC+TGG + chr6_1:53148017-53148036 None:intergenic 55.0%
GGAGCTCTTCTTCTCGATGG+GGG - chr6_1:53148535-53148554 Msa0888520:CDS 55.0%
AGCACCTGTGCTAGTGTTCG+AGG - chr6_1:53148964-53148983 Msa0888520:intron 55.0%
!! TGGGCAATGCTTGGTGCTGC+TGG - chr6_1:53148019-53148038 Msa0888520:intron 60.0%
TTGGCGAGTTCCTCGCTGGC+CGG + chr6_1:53146423-53146442 None:intergenic 65.0%
CCACTTGGCGAGTTCCTCGC+TGG + chr6_1:53146427-53146446 None:intergenic 65.0%
CCAGCGAGGAACTCGCCAAG+TGG - chr6_1:53146424-53146443 Msa0888520:intron 65.0%
TGGTGGCAGGTCCGGACAGA+AGG - chr6_1:53147073-53147092 Msa0888520:CDS 65.0%
AGTGGCTACTCCGGCCAGCG+AGG - chr6_1:53146410-53146429 Msa0888520:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 53145882 53149793 53145882 ID=Msa0888520;Name=Msa0888520
chr6_1 mRNA 53145882 53149793 53145882 ID=Msa0888520-mRNA-1;Parent=Msa0888520;Name=Msa0888520-mRNA-1;_AED=0.04;_eAED=0.04;_QI=352|1|1|1|0.83|0.71|7|226|289
chr6_1 exon 53145882 53146049 53145882 ID=Msa0888520-mRNA-1:exon:10742;Parent=Msa0888520-mRNA-1
chr6_1 exon 53146072 53146390 53146072 ID=Msa0888520-mRNA-1:exon:10741;Parent=Msa0888520-mRNA-1
chr6_1 exon 53147009 53147143 53147009 ID=Msa0888520-mRNA-1:exon:10740;Parent=Msa0888520-mRNA-1
chr6_1 exon 53147567 53147687 53147567 ID=Msa0888520-mRNA-1:exon:10739;Parent=Msa0888520-mRNA-1
chr6_1 exon 53148342 53148392 53148342 ID=Msa0888520-mRNA-1:exon:10738;Parent=Msa0888520-mRNA-1
chr6_1 exon 53148509 53148593 53148509 ID=Msa0888520-mRNA-1:exon:10737;Parent=Msa0888520-mRNA-1
chr6_1 exon 53149225 53149793 53149225 ID=Msa0888520-mRNA-1:exon:10736;Parent=Msa0888520-mRNA-1
chr6_1 five_prime_UTR 53149442 53149793 53149442 ID=Msa0888520-mRNA-1:five_prime_utr;Parent=Msa0888520-mRNA-1
chr6_1 CDS 53149225 53149441 53149225 ID=Msa0888520-mRNA-1:cds;Parent=Msa0888520-mRNA-1
chr6_1 CDS 53148509 53148593 53148509 ID=Msa0888520-mRNA-1:cds;Parent=Msa0888520-mRNA-1
chr6_1 CDS 53148342 53148392 53148342 ID=Msa0888520-mRNA-1:cds;Parent=Msa0888520-mRNA-1
chr6_1 CDS 53147567 53147687 53147567 ID=Msa0888520-mRNA-1:cds;Parent=Msa0888520-mRNA-1
chr6_1 CDS 53147009 53147143 53147009 ID=Msa0888520-mRNA-1:cds;Parent=Msa0888520-mRNA-1
chr6_1 CDS 53146130 53146390 53146130 ID=Msa0888520-mRNA-1:cds;Parent=Msa0888520-mRNA-1
chr6_1 three_prime_UTR 53146072 53146129 53146072 ID=Msa0888520-mRNA-1:three_prime_utr;Parent=Msa0888520-mRNA-1
chr6_1 three_prime_UTR 53145882 53146049 53145882 ID=Msa0888520-mRNA-1:three_prime_utr;Parent=Msa0888520-mRNA-1
Gene Sequence

>Msa0888520

ATGGCTTCCATTGCTGCTTCTACTGCAGCTGCTTCACTTGGAATGTCTGAAATGCTTGGAAATCCAGTTAAATTCAGTGGTGCAACTAGGTCTGTTCCTTCTTCTTCAACTCCATCTACCTTCAAAACTGTTGCTCTTTTCCAAAAGAAGAAAGCAGCACCTCCACCAAAGCAGAAAGTGGCTACTCCGGCCAGCGAGGAACTCGCCAAGTGGTATGGTCCGGACAGAAGGATCTTCTTGCCAGACGGTCTCTTGGACAGATCTGAGATCCCCGAGTACTTGACTGGAGAAGTCCCTGGAGACTATGGTTACGATCCTTTTGGTCTAAGCAAGAAGCCCGAAGACTTCGCCAAATATCAAGGATATGAGTTGATTCATGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATATGGAGCCAACTGTGGTCCTGAAGCAGTTTGGTTCAAGACAGGAGCTCTTCTTCTCGATGGGGGTACGTTGAACTACTTCGGAAAGCCCATCCCCATCAATCTTATTGTTGCTGTTGTTGCTGAGGTTGTTCTCTTAGGAGGTGCTGAGTACTACAGAATTACCAATGGATTGGAATTGGAAGACAAGTTTCACCCAGGTGGTCCATTTGATCCATTAGGGCTAGCAAATGATCCAGACCAAGCTGCAATTCTTAAAGTGAAGGAAATTAAGAATGGTAGACTTGCTATGTTTGCCATGCTTGGTTTCTTCATCCAAGCTTATGTCACAGGAGAAGGTCCAGTTGAGAACTTAGCAAAGCATCTCAGTGATCCTTTCGGAAACAACTTGCTCACTGTCATTTCTGGAAATGTTGAGAGGGTTCCAACTCTGTGA

Protein sequence

>Msa0888520

MASIAASTAAASLGMSEMLGNPVKFSGATRSVPSSSTPSTFKTVALFQKKKAAPPPKQKVATPASEELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVVAEVVLLGGAEYYRITNGLELEDKFHPGGPFDPLGLANDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNVERVPTL*