AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0958960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0958960 MtrunA17_Chr6g0476641 99.308 289 2 0 1 289 1 289 0.0 582
Msa0958960 MtrunA17_Chr4g0051941 48.352 273 114 9 9 274 2 254 9.35e-72 222
Msa0958960 MtrunA17_Chr6g0453151 55.024 209 85 5 71 274 116 320 1.54e-69 218
Msa0958960 MtrunA17_Chr6g0453141 55.024 209 85 5 71 274 49 253 5.17e-69 214
Msa0958960 MtrunA17_Chr6g0453181 47.826 276 116 8 4 274 1 253 7.73e-69 214
Msa0958960 MtrunA17_Chr5g0447531 55.502 209 84 5 71 274 49 253 6.95e-67 209
Msa0958960 MtrunA17_Chr6g0453161 46.520 273 120 8 7 274 269 520 4.69e-66 215
Msa0958960 MtrunA17_Chr6g0453161 54.545 209 86 5 71 274 51 255 2.11e-65 213
Msa0958960 MtrunA17_Chr2g0318521 49.590 244 107 7 42 274 14 252 8.06e-63 199
Msa0958960 MtrunA17_Chr1g0157481 43.590 234 116 4 57 276 93 324 2.26e-52 174
Msa0958960 MtrunA17_Chr6g0464511 43.498 223 83 6 57 274 16 200 8.67e-46 153
Msa0958960 MtrunA17_Chr6g0462031 40.625 192 102 5 91 279 56 238 3.15e-40 140
Msa0958960 MtrunA17_Chr5g0448421 37.102 283 125 12 23 279 19 274 7.52e-39 137
Msa0958960 MtrunA17_Chr3g0133901 38.318 214 94 6 91 282 68 265 1.46e-38 136
Msa0958960 MtrunA17_Chr5g0448411 37.102 283 123 12 23 279 19 272 1.32e-37 134
Msa0958960 MtrunA17_Chr4g0006181 33.992 253 106 8 75 282 111 347 5.68e-36 131
Msa0958960 MtrunA17_Chr3g0092091 38.424 203 101 5 91 282 63 252 5.26e-35 127
Msa0958960 MtrunA17_Chr8g0345631 38.140 215 96 7 74 270 61 256 1.18e-34 126
Msa0958960 MtrunA17_Chr2g0301081 35.586 222 112 7 74 280 60 265 1.30e-34 126
Msa0958960 MtrunA17_Chr6g0453171 60.465 86 32 1 191 274 1 86 1.04e-28 105
Msa0958960 MtrunA17_Chr3g0113311 33.486 218 91 5 91 264 67 274 7.54e-26 103
Msa0958960 MtrunA17_Chr2g0279001 30.412 194 86 6 91 252 73 249 9.77e-17 78.2
Msa0958960 MtrunA17_Chr2g0296081 51.389 72 31 2 210 281 36 103 9.47e-14 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0958960 AT4G10340.1 81.786 280 49 2 11 289 2 280 1.13e-151 426
Msa0958960 AT1G29930.1 48.375 277 115 9 4 274 1 255 2.96e-69 216
Msa0958960 AT1G29920.1 52.232 224 97 6 57 274 36 255 8.75e-69 214
Msa0958960 AT1G29910.1 52.232 224 97 6 57 274 36 255 8.75e-69 214
Msa0958960 AT2G34420.1 51.339 224 99 5 57 274 34 253 1.22e-67 211
Msa0958960 AT2G34430.1 51.121 223 99 5 58 274 36 254 3.57e-67 210
Msa0958960 AT2G05100.1 55.714 210 82 6 71 274 49 253 1.16e-64 204
Msa0958960 AT2G05070.1 55.714 210 82 6 71 274 49 253 1.28e-64 204
Msa0958960 AT3G27690.1 55.238 210 83 6 71 274 50 254 5.29e-64 202
Msa0958960 AT3G27690.2 55.238 210 83 6 71 274 82 286 5.89e-64 203
Msa0958960 AT5G54270.1 47.843 255 114 8 31 274 7 253 5.74e-63 199
Msa0958960 AT1G76570.1 42.963 270 132 7 28 280 62 326 6.01e-55 181
Msa0958960 AT2G05100.2 53.202 203 84 6 62 258 40 237 2.21e-53 176
Msa0958960 AT3G54890.1 43.229 192 97 6 91 279 55 237 5.62e-43 147
Msa0958960 AT1G45474.2 37.799 209 97 4 91 279 56 251 7.00e-38 134
Msa0958960 AT1G45474.1 37.799 209 97 4 91 279 56 251 7.00e-38 134
Msa0958960 AT3G08940.2 32.667 300 128 9 29 282 16 287 9.91e-37 132
Msa0958960 AT1G61520.3 37.500 264 113 11 42 279 33 270 9.98e-37 132
Msa0958960 AT1G61520.1 37.500 264 113 11 42 279 33 270 9.98e-37 132
Msa0958960 AT1G19150.1 35.683 227 109 7 74 282 63 270 1.12e-35 129
Msa0958960 AT3G47470.1 38.308 201 100 5 91 280 64 251 1.76e-35 128
Msa0958960 AT3G61470.1 39.070 215 94 7 74 270 50 245 3.43e-35 127
Msa0958960 AT5G01530.1 33.755 237 101 6 91 282 65 290 6.03e-34 125
Msa0958960 AT1G61520.2 41.627 209 89 9 97 279 14 215 1.14e-33 122
Msa0958960 AT3G54890.4 40.964 166 85 6 91 254 55 209 1.09e-29 112
Msa0958960 AT3G54890.2 37.173 191 76 6 91 279 55 203 1.27e-29 112
Msa0958960 AT2G40100.1 35.193 233 93 6 75 264 55 272 1.84e-29 113
Msa0958960 AT1G15820.1 30.964 197 81 6 91 252 70 246 2.96e-17 79.7
Msa0958960 AT3G54890.3 40.206 97 49 3 91 186 55 143 2.71e-16 75.1
Msa0958960 AT5G28450.1 49.315 73 35 2 200 270 89 161 1.16e-12 65.5

Find 110 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAATTTGATGCATAAAAT+TGG 0.191695 6_3:+75212852 Msa0958950:intron
TTTCAATTTGGTTGAAATAA+TGG 0.215256 6_3:+75223685 None:intergenic
AATTTGCTCACTGTCATTTC+TGG 0.221840 6_3:-75220321 Msa0958960:CDS
TTATTTCTGCCATTCATTTC+AGG 0.243450 6_3:+75223643 None:intergenic
GTTGCACCACTGAATTTAAC+TGG 0.292364 6_3:+75223272 None:intergenic
CATCTCACTTGACATTATTA+AGG 0.298589 6_3:-75212970 Msa0958960:three_prime_UTR
CCTGAGGCCTTCAACAAATA+TGG 0.304749 6_3:-75221591 Msa0958960:CDS
GAGGTGCGGCTTTCTTCTTT+TGG 0.314746 6_3:+75223195 None:intergenic
TGTTGCTGAGGTTGTTCTCT+TGG 0.333693 6_3:-75221087 Msa0958960:CDS
ACATACTTGGCGAAGTCTTC+GGG 0.334071 6_3:+75222218 None:intergenic
ACCTTGAACCAAACTGCTTC+AGG 0.342619 6_3:+75221555 None:intergenic
GGTGGTCCATTTGATCCATT+AGG 0.354018 6_3:-75220507 Msa0958960:CDS
GGATCATTTGCTAGCCCTAA+TGG 0.356867 6_3:+75220492 None:intergenic
AAGCATCTCAGTGATCCTTT+TGG 0.357317 6_3:-75220348 Msa0958960:CDS
ATGAGTTGATTCATGCTAGA+TGG 0.360641 6_3:-75221644 Msa0958960:CDS
GACATACTTGGCGAAGTCTT+CGG 0.362129 6_3:+75222217 None:intergenic
TTAAGAATTGCAGCTTGGTC+TGG 0.365861 6_3:+75220471 None:intergenic
ATGTGGTTAGATTCTGTGTT+TGG 0.368429 6_3:+75223593 None:intergenic
AGCTATGGTTACGATCCTTT+TGG 0.377709 6_3:-75222254 Msa0958960:CDS
GGAGTAGCCACTTTCTGCTT+TGG 0.379363 6_3:+75223170 None:intergenic
CTTGCTATGTTTGCCATGCT+TGG 0.383198 6_3:-75220423 Msa0958960:CDS
CTTCTTGCCAGACGGTCTCT+TGG 0.386703 6_3:-75222437 Msa0958960:CDS
TGGGCAATGCTTGGTGCTGC+TGG 0.390031 6_3:-75221624 Msa0958960:CDS
TCATGATCATGGTCATTGAT+TGG 0.390138 6_3:+75223492 None:intergenic
GTTGCTGAGGTTGTTCTCTT+GGG 0.392770 6_3:-75221086 Msa0958960:CDS
CCGGAGCTCTTCTTCTTGAC+GGG 0.404794 6_3:-75221163 Msa0958960:CDS
ACCGGAGCTCTTCTTCTTGA+CGG 0.411781 6_3:-75221164 Msa0958960:CDS
ATCCAATGTATGCATTTGAT+TGG 0.435175 6_3:+75223534 None:intergenic
GGCTTCTTGCTTAGACCAAA+AGG 0.435777 6_3:+75222239 None:intergenic
GCTAGCCCTAATGGATCAAA+TGG 0.438621 6_3:+75220501 None:intergenic
CTTGGAATGTCTGAAATGCT+TGG 0.439282 6_3:-75223299 Msa0958960:CDS
GCCACTTTCTGCTTTGGTGG+AGG 0.447166 6_3:+75223176 None:intergenic
TCCTGAAGCAGTTTGGTTCA+AGG 0.447410 6_3:-75221556 Msa0958960:intron
ACTGTGGTCCTGAAGCAGTT+TGG 0.450252 6_3:-75221563 Msa0958960:CDS
GTTGGCTCCATATTTGTTGA+AGG 0.451119 6_3:+75221584 None:intergenic
CCATATTTGTTGAAGGCCTC+AGG 0.453560 6_3:+75221591 None:intergenic
GTGAGCAAATTGTTTCCAAA+AGG 0.456801 6_3:+75220333 None:intergenic
GTGGTCCATTTGATCCATTA+GGG 0.463667 6_3:-75220506 Msa0958960:CDS
TGCTTTGCTAAGTTCTCGAC+TGG 0.463754 6_3:+75220366 None:intergenic
GTATTGTACACATTCAAGAT+TGG 0.467355 6_3:+75220242 None:intergenic
TTCATCCAAGCTTATGTCAC+CGG 0.479877 6_3:-75220396 Msa0958960:CDS
TCTACAGCAGCTGCTTCACT+TGG 0.481842 6_3:-75223317 Msa0958960:CDS
GTAGCCACTTTCTGCTTTGG+TGG 0.482184 6_3:+75223173 None:intergenic
CAAGCTTATGTCACCGGAGA+AGG 0.483154 6_3:-75220390 Msa0958960:CDS
TTGGCGAGTTCCTCGCTGGC+CGG 0.484863 6_3:+75223149 None:intergenic
AACAGCAACGATAAGATTGA+TGG 0.487105 6_3:+75221109 None:intergenic
GATTTGATTCATCACAGAGT+TGG 0.493860 6_3:+75220282 None:intergenic
AGCTGCTGTAGAAGCAGCAA+TGG 0.508497 6_3:+75223328 None:intergenic
ATGGACTAATGCAGATATCA+AGG 0.508883 6_3:-75221669 Msa0958960:intron
GACTTCTCCAGTCAAGTACT+CGG 0.509895 6_3:+75222399 None:intergenic
GTAGAAATCACATACTCTCC+AGG 0.510743 6_3:+75222376 None:intergenic
AAACAAGAACCTGAAATGAA+TGG 0.510971 6_3:-75223652 Msa0958960:five_prime_UTR
GATCTGTCCAAGAGACCGTC+TGG 0.514379 6_3:+75222430 None:intergenic
CCACGTCAGATTCATGATCA+TGG 0.517407 6_3:+75223481 None:intergenic
GGCAAGAAGATCCTTCTGTC+CGG 0.520057 6_3:+75222451 None:intergenic
TGGTGGCAGGTCCGGACAGA+AGG 0.520994 6_3:-75222462 Msa0958960:intron
AACGATAAGATTGATGGGGA+TGG 0.522597 6_3:+75221115 None:intergenic
ACTAAAATTCAAGAGTGAGT+TGG 0.523088 6_3:+75212924 Msa0958950:intron
AACCAATCAAATGCATACAT+TGG 0.523609 6_3:-75223536 Msa0958960:five_prime_UTR
CATTTCTGGAAATGTTGAGA+GGG 0.525273 6_3:-75220307 Msa0958960:CDS
GAGGAACTCGCCAAGTGGTA+TGG 0.528132 6_3:-75223140 Msa0958960:intron
GTAGATGGAGTTGAAGATGA+AGG 0.529227 6_3:+75223239 None:intergenic
TGAGTTGATTCATGCTAGAT+GGG 0.530306 6_3:-75221643 Msa0958960:CDS
GTTCTCGACTGGACCTTCTC+CGG 0.533405 6_3:+75220377 None:intergenic
GAGATCCCCGAGTACTTGAC+TGG 0.539762 6_3:-75222406 Msa0958960:CDS
CTTCTCCGGTGACATAAGCT+TGG 0.540773 6_3:+75220391 None:intergenic
GCTGAGGTTGTTCTCTTGGG+AGG 0.541084 6_3:-75221083 Msa0958960:CDS
AAATATACATACCAATCCAT+TGG 0.541578 6_3:+75221040 None:intergenic
AGCTGCAATTCTTAAAGTGA+AGG 0.541774 6_3:-75220463 Msa0958960:CDS
ACCTCCACCAAAGCAGAAAG+TGG 0.545715 6_3:-75223177 Msa0958960:CDS
CGGAGCTCTTCTTCTTGACG+GGG 0.548228 6_3:-75221162 Msa0958960:CDS
CTACAGAATTACCAATGGAT+TGG 0.549186 6_3:-75221051 Msa0958960:intron
TCACTTTAAGAATTGCAGCT+TGG 0.550295 6_3:+75220466 None:intergenic
AAAGTGAAGGAAATTAAGAA+TGG 0.552214 6_3:-75220450 Msa0958960:CDS
AATGGATCAAATGGACCACC+TGG 0.553521 6_3:+75220510 None:intergenic
ACGATAAGATTGATGGGGAT+GGG 0.554739 6_3:+75221116 None:intergenic
CCCGTCAAGAAGAAGAGCTC+CGG 0.555240 6_3:+75221163 None:intergenic
TACTTGACTGGAGAAGTCCC+TGG 0.555966 6_3:-75222394 Msa0958960:CDS
ACTATATGATGCATGGTTAG+TGG 0.558493 6_3:+75223447 None:intergenic
CATGCTAGATGGGCAATGCT+TGG 0.559249 6_3:-75221633 Msa0958960:CDS
AACTGCTTCAGGACCACAGT+TGG 0.560727 6_3:+75221566 None:intergenic
ACTTCTCCAGTCAAGTACTC+GGG 0.566093 6_3:+75222400 None:intergenic
AAAGCAGAAAGTGGCTACTC+CGG 0.571671 6_3:-75223168 Msa0958960:CDS
ACAGCAACGATAAGATTGAT+GGG 0.578647 6_3:+75221110 None:intergenic
TCATTTCTGGAAATGTTGAG+AGG 0.582692 6_3:-75220308 Msa0958960:CDS
TATCGTTGCTGTTGTTGCTG+AGG 0.586975 6_3:-75221099 Msa0958960:CDS
GGAAATCCAGTTAAATTCAG+TGG 0.588045 6_3:-75223278 Msa0958960:CDS
TTAAATTCAGTGGTGCAACT+AGG 0.588240 6_3:-75223268 Msa0958960:CDS
TGCTGGATTCATCATTCCTG+AGG 0.589247 6_3:-75221607 Msa0958960:CDS
GCAGCAATGGAAGCCATGGT+TGG 0.590836 6_3:+75223341 None:intergenic
AAGATTCCTAAAACCAACCA+TGG 0.597630 6_3:-75223354 Msa0958960:exon
TGGTGACTTACCATACCACT+TGG 0.598115 6_3:+75223130 None:intergenic
AGTAGTTACTATATGATGCA+TGG 0.603189 6_3:+75223440 None:intergenic
AGAAGCAGCAATGGAAGCCA+TGG 0.608761 6_3:+75223337 None:intergenic
AACAAATATGGAGCCAACTG+TGG 0.610263 6_3:-75221579 Msa0958960:CDS
TAGAAATCACATACTCTCCA+GGG 0.613959 6_3:+75222377 None:intergenic
TTTCTGCTTTGGTGGAGGTG+CGG 0.614438 6_3:+75223181 None:intergenic
AGAAGGATCTTCTTGCCAGA+CGG 0.619123 6_3:-75222445 Msa0958960:CDS
CTTCTCCAGTCAAGTACTCG+GGG 0.643314 6_3:+75222401 None:intergenic
ATGAGATGATGCAGCTGATG+TGG 0.649478 6_3:+75223576 None:intergenic
GAGTACTACAGAATTACCAA+TGG 0.652754 6_3:-75221056 Msa0958960:CDS
TTGGATGAAGAAACCAAGCA+TGG 0.655601 6_3:+75220410 None:intergenic
TTGGAAGACAAGTTTCACCC+AGG 0.666043 6_3:-75220528 Msa0958960:CDS
AGTGGCTACTCCGGCCAGCG+AGG 0.669111 6_3:-75223159 Msa0958960:CDS
CCAGCGAGGAACTCGCCAAG+TGG 0.682354 6_3:-75223145 Msa0958960:CDS
CCATGATCATGAATCTGACG+TGG 0.690142 6_3:-75223481 Msa0958960:five_prime_UTR
GGAGCTCTTCTTCTTGACGG+GGG 0.690226 6_3:-75221161 Msa0958960:CDS
ATGGATCAAATGGACCACCT+GGG 0.698455 6_3:+75220511 None:intergenic
GAAGACAAGTTTCACCCAGG+TGG 0.699065 6_3:-75220525 Msa0958960:CDS
CAGCAACGATAAGATTGATG+GGG 0.705585 6_3:+75221111 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGTTTATTGAAATAT+AGG + chr6_3:75217667-75217686 Msa0958950:CDS 10.0%
!! ATTTCTAAATTATGTAAATT+TGG + chr6_3:75217919-75217938 Msa0958950:intron 10.0%
!!! ATAACATCTTTATATTATTT+TGG + chr6_3:75220908-75220927 None:intergenic 10.0%
!!! AAGATGTTATAATTATATTT+TGG - chr6_3:75220918-75220937 Msa0958960:intron 10.0%
!!! AGATGTTATAATTATATTTT+GGG - chr6_3:75220919-75220938 Msa0958960:intron 10.0%
!!! ATCTTTTCAATAATTTTTTT+GGG - chr6_3:75222015-75222034 Msa0958960:intron 10.0%
!!! TTTTTTTTTTTTTTTGACAA+GGG + chr6_3:75222159-75222178 None:intergenic 10.0%
!! ACATATTAATAGAAATATTT+AGG - chr6_3:75222629-75222648 Msa0958960:intron 10.0%
!! CATATTAATAGAAATATTTA+GGG - chr6_3:75222630-75222649 Msa0958960:intron 10.0%
!!! ACTTTTATTTTGTTAATTAA+CGG - chr6_3:75222747-75222766 Msa0958960:intron 10.0%
!!! TTTTTCATTTTCTTTCAATT+TGG + chr6_3:75212864-75212883 Msa0958950:intron 15.0%
!!! CAACTTTTTTATTGAAATTT+TGG - chr6_3:75214220-75214239 Msa0958960:intron 15.0%
!!! TTTATGAAATTTTAACAACT+AGG - chr6_3:75214670-75214689 Msa0958960:intron 15.0%
!! TAAATTCTAATAACAATGAT+TGG + chr6_3:75215524-75215543 Msa0958950:intron 15.0%
!! TATATTATACTACTTATTGT+TGG + chr6_3:75216809-75216828 Msa0958950:CDS 15.0%
!! TTCAATAAAAATGATATATG+AGG - chr6_3:75217517-75217536 Msa0958960:intron 15.0%
!!! AACGAATAATTTTGATTTTT+AGG - chr6_3:75217801-75217820 Msa0958960:intron 15.0%
!!! ACGAATAATTTTGATTTTTA+GGG - chr6_3:75217802-75217821 Msa0958960:intron 15.0%
!! CAAATTTAACTCTATAATAA+GGG + chr6_3:75219494-75219513 None:intergenic 15.0%
!! AATTGGATAATCTTATAAAA+AGG + chr6_3:75219897-75219916 None:intergenic 15.0%
!! TTGTTAGATCATTAAAAAAA+CGG + chr6_3:75220693-75220712 None:intergenic 15.0%
!!! ATAAAAAGTATTTACACTAA+AGG - chr6_3:75220731-75220750 Msa0958960:intron 15.0%
!! TTGAATGGTATAAAATATAA+GGG + chr6_3:75221113-75221132 None:intergenic 15.0%
!! TTTGAATGGTATAAAATATA+AGG + chr6_3:75221114-75221133 None:intergenic 15.0%
!! ATTGTATTTGTTCATAATAA+TGG + chr6_3:75221872-75221891 None:intergenic 15.0%
!!! GATCTTTTCAATAATTTTTT+TGG - chr6_3:75222014-75222033 Msa0958960:intron 15.0%
!!! GTTTTTTTTTTTTTTTGACA+AGG + chr6_3:75222160-75222179 None:intergenic 15.0%
!!! TTTGTTTTTTCTTTTTGAAA+GGG + chr6_3:75222195-75222214 None:intergenic 15.0%
!!! ATTTGTTTTTTCTTTTTGAA+AGG + chr6_3:75222196-75222215 None:intergenic 15.0%
!!! TAAAAAAAGCTAATTTTTGA+AGG + chr6_3:75222424-75222443 None:intergenic 15.0%
!!! ATTGTTATTATATCAAACTT+AGG - chr6_3:75222697-75222716 Msa0958960:intron 15.0%
!! AAGATAAAATAATGAGAATA+TGG + chr6_3:75222909-75222928 None:intergenic 15.0%
!! TTTCAATTTGGTTGAAATAA+TGG + chr6_3:75212852-75212871 Msa0958950:intron 20.0%
!! CATTGTATAAAATTCTCTTA+AGG - chr6_3:75213463-75213482 Msa0958960:intron 20.0%
!! TAAAATTCTCTTAAGGTATA+AGG - chr6_3:75213470-75213489 Msa0958960:intron 20.0%
!!! TGTAGTTTTCTTTTTGAAAA+TGG - chr6_3:75213679-75213698 Msa0958960:intron 20.0%
!!! TTTTGGTTCTTTTGATAATT+TGG - chr6_3:75214052-75214071 Msa0958960:intron 20.0%
!! TGAATTAATAAAGTTTGTGA+CGG + chr6_3:75215023-75215042 Msa0958950:CDS 20.0%
!! AAACAATGCAATCAAAATAT+TGG + chr6_3:75215303-75215322 Msa0958950:intron 20.0%
!!! ATTGGTTTTTTTGTGTAAAA+TGG + chr6_3:75215572-75215591 Msa0958950:intron 20.0%
!! TAAAATAAGTCAATGCAAAA+AGG + chr6_3:75215742-75215761 Msa0958950:intron 20.0%
!!! GTTAATTTGATGCATAAAAT+TGG + chr6_3:75216414-75216433 Msa0958950:CDS 20.0%
!! TTTATACAACAAAATCTAAC+TGG - chr6_3:75216438-75216457 Msa0958960:intron 20.0%
!! AAAATACACAATGTTACATA+CGG - chr6_3:75216883-75216902 Msa0958960:intron 20.0%
!! TTAATAAGAAACTCTAATAG+AGG - chr6_3:75216991-75217010 Msa0958960:intron 20.0%
!!! AATAATTTTGATTTTTAGGG+TGG - chr6_3:75217805-75217824 Msa0958960:intron 20.0%
!!! TTTTTGAAAAATATGCATAC+AGG + chr6_3:75218283-75218302 Msa0958950:CDS 20.0%
!! GCAAATTTAACTCTATAATA+AGG + chr6_3:75219495-75219514 None:intergenic 20.0%
!! CTATTGAAAATGAAATACAA+GGG + chr6_3:75219591-75219610 None:intergenic 20.0%
!! AAAAAAATATATAGTGCACA+CGG - chr6_3:75220530-75220549 Msa0958960:CDS 20.0%
!!! CAATGTAAATTTGTTTACAT+TGG + chr6_3:75220617-75220636 None:intergenic 20.0%
!!! TATTGAGGTATGTTTTTTTA+GGG + chr6_3:75221149-75221168 None:intergenic 20.0%
!!! ATATTGAGGTATGTTTTTTT+AGG + chr6_3:75221150-75221169 None:intergenic 20.0%
!! GATATCAAAATTCTATGAAT+TGG + chr6_3:75221710-75221729 None:intergenic 20.0%
!!! ATAATAATGGATGAGATTTT+TGG + chr6_3:75221859-75221878 None:intergenic 20.0%
!! ATGAACAAATACAATAATGA+TGG - chr6_3:75221877-75221896 Msa0958960:intron 20.0%
!! TTTGACATTTCTACTAAAAT+TGG - chr6_3:75221980-75221999 Msa0958960:intron 20.0%
!! AAATGTAATAATCTGAAGAT+AGG + chr6_3:75222277-75222296 None:intergenic 20.0%
!!! AGATTACACTTATTTTAAGA+CGG - chr6_3:75222460-75222479 Msa0958960:intron 20.0%
!! TTTAAGTAAAACATTGCAAA+GGG - chr6_3:75222958-75222977 Msa0958960:intron 20.0%
!!! GTTAATTTGATGCATAAAAT+TGG + chr6_3:75216414-75216433 Msa0958950:CDS 20.0%
!! AACATGTTTTATCTGATTCT+TGG + chr6_3:75212919-75212938 Msa0958950:intron 25.0%
!! TAAGACAAGATTTTAAATCG+TGG - chr6_3:75213603-75213622 Msa0958960:intron 25.0%
!! ATTGACTATAATTTGAAGCT+TGG + chr6_3:75213928-75213947 Msa0958950:intron 25.0%
!! ACTATAGTTGCTAAAACTTT+TGG - chr6_3:75214035-75214054 Msa0958960:intron 25.0%
! TTGTAAGATTTAGACATACT+TGG + chr6_3:75214332-75214351 Msa0958950:intron 25.0%
! ATCGTTAATCAACGAAAATA+AGG + chr6_3:75214422-75214441 Msa0958950:intron 25.0%
!!! TTTTCGTTGATTAACGATTT+TGG - chr6_3:75214424-75214443 Msa0958960:intron 25.0%
! AAAATAAACCTAAAATGCAG+TGG + chr6_3:75214513-75214532 Msa0958950:intron 25.0%
!!! TCATTGTGACTTTTTTTTGA+GGG + chr6_3:75214563-75214582 Msa0958950:intron 25.0%
! AAAATAAGTCTCAAATTCAG+TGG - chr6_3:75214638-75214657 Msa0958960:intron 25.0%
!! TTTTCTGATTTAGAAACTGA+AGG - chr6_3:75214701-75214720 Msa0958960:intron 25.0%
! CTTATGTTACATTAATTGTG+TGG - chr6_3:75214821-75214840 Msa0958960:intron 25.0%
! AAATATACATACCAATCCAT+TGG + chr6_3:75215497-75215516 Msa0958950:intron 25.0%
! ACTATGTAGATATCTATGTT+TGG - chr6_3:75215600-75215619 Msa0958960:intron 25.0%
! AAAGTGAAGGAAATTAAGAA+TGG - chr6_3:75216084-75216103 Msa0958960:intron 25.0%
!! ACATCTCACTCTTTATTTAA+TGG - chr6_3:75216313-75216332 Msa0958960:intron 25.0%
!!! ATTTTAGTGCATGAATAGTT+TGG - chr6_3:75216354-75216373 Msa0958960:intron 25.0%
! TTGATGCATAAAATTGGAAT+AGG + chr6_3:75216408-75216427 Msa0958950:CDS 25.0%
!! ACACTATGAGAAATGATTTT+TGG - chr6_3:75216472-75216491 Msa0958960:intron 25.0%
!!! ATATGTTTTACTTTTGAACC+GGG + chr6_3:75216585-75216604 Msa0958950:CDS 25.0%
!!! CATATGTTTTACTTTTGAAC+CGG + chr6_3:75216586-75216605 Msa0958950:CDS 25.0%
! CTTTCTATTAATTCAGCTTA+GGG - chr6_3:75216695-75216714 Msa0958960:intron 25.0%
! ATACTACTTATTGTTGGATA+TGG + chr6_3:75216803-75216822 Msa0958950:CDS 25.0%
! TAATTGTTCTAACTTTCAAC+AGG + chr6_3:75217175-75217194 Msa0958950:CDS 25.0%
! TTCCAAATTAACAAACTTAG+TGG - chr6_3:75217226-75217245 Msa0958960:intron 25.0%
!!! TAGGGTTTTAGTAATTGTTT+AGG + chr6_3:75217458-75217477 Msa0958950:CDS 25.0%
!! GAGTACAATATCTAAAACTA+GGG + chr6_3:75217476-75217495 Msa0958950:CDS 25.0%
!! TGAGTACAATATCTAAAACT+AGG + chr6_3:75217477-75217496 Msa0958950:CDS 25.0%
! GAATAATATTGGATACTTTC+TGG + chr6_3:75217986-75218005 Msa0958950:intron 25.0%
!!! AGAAGTATTCGGAATAATAT+TGG + chr6_3:75217997-75218016 Msa0958950:intron 25.0%
!!! AGATGTTTCTAAGAAGTATT+CGG + chr6_3:75218008-75218027 Msa0958950:intron 25.0%
! TACTACAAAATTGTATGAGT+AGG - chr6_3:75218081-75218100 Msa0958960:intron 25.0%
!!! ATTTTGACATCTTCTAATGA+AGG - chr6_3:75218175-75218194 Msa0958960:intron 25.0%
! AAAAGAGTTATTGTACCAAA+AGG + chr6_3:75218201-75218220 Msa0958950:intron 25.0%
!! GAAAATGTTTTGCAACAATT+AGG + chr6_3:75218746-75218765 Msa0958950:intron 25.0%
!! TTTTTCTTCACTAACAAGAA+AGG + chr6_3:75218771-75218790 Msa0958950:intron 25.0%
!!! TATTCGAAGATTTGTTAACT+GGG + chr6_3:75218805-75218824 Msa0958950:intron 25.0%
!!! ATATTCGAAGATTTGTTAAC+TGG + chr6_3:75218806-75218825 Msa0958950:intron 25.0%
! ATCATATTGTGTTTGAAGAA+AGG + chr6_3:75219462-75219481 None:intergenic 25.0%
! TGAAGAAATCAACAAATTGA+TGG + chr6_3:75219524-75219543 None:intergenic 25.0%
! ATATACGCATGATTGTAATT+AGG + chr6_3:75219555-75219574 None:intergenic 25.0%
! CCTATTGAAAATGAAATACA+AGG + chr6_3:75219592-75219611 None:intergenic 25.0%
!! CCTTGTATTTCATTTTCAAT+AGG - chr6_3:75219589-75219608 Msa0958960:intron 25.0%
! ATAAAAAGGAATGAGAAACA+AGG + chr6_3:75219883-75219902 None:intergenic 25.0%
! AAAAGAACGAAGAATTGAAT+CGG + chr6_3:75220017-75220036 None:intergenic 25.0%
!! AGTTGAGAGATTTTAGATAA+AGG - chr6_3:75220361-75220380 Msa0958960:CDS 25.0%
! ACTAGTTGAGAAATAGATAA+AGG - chr6_3:75220397-75220416 Msa0958960:CDS 25.0%
! CTAGTTGAGAAATAGATAAA+GGG - chr6_3:75220398-75220417 Msa0958960:CDS 25.0%
! GGGAAGTAGTAAAATATTAA+AGG - chr6_3:75220418-75220437 Msa0958960:CDS 25.0%
! GTTAAGTAAATACTAACAAG+TGG + chr6_3:75220886-75220905 None:intergenic 25.0%
!!! TATGTTTTTTTAGGGTATTG+AGG + chr6_3:75221141-75221160 None:intergenic 25.0%
! ATTAATTACCAGTTTCATGA+TGG + chr6_3:75221185-75221204 None:intergenic 25.0%
! TGATGTATTAAAGCAAACTA+TGG + chr6_3:75221308-75221327 None:intergenic 25.0%
! ACAAAAAAGATTGAAGAGAT+GGG + chr6_3:75221340-75221359 None:intergenic 25.0%
!!! TTCAATCTTTTTTGTGTCAA+TGG - chr6_3:75221345-75221364 Msa0958960:intron 25.0%
!!! TGAATCGATTATTTTAGAGA+AGG + chr6_3:75221551-75221570 None:intergenic 25.0%
! GAGAAAATGAAGAAAAAAAC+AGG + chr6_3:75221754-75221773 None:intergenic 25.0%
! TCGTATAGTTATAACTTATG+TGG - chr6_3:75222087-75222106 Msa0958960:intron 25.0%
! TGAAGAGAAAAATCGTAAAA+AGG - chr6_3:75222564-75222583 Msa0958960:intron 25.0%
! AAAGTACAAATGAAAACTAC+TGG - chr6_3:75222588-75222607 Msa0958960:intron 25.0%
! AATATGTTTATCCATGCTTT+AGG + chr6_3:75222616-75222635 None:intergenic 25.0%
! CTTTAAGTAAAACATTGCAA+AGG - chr6_3:75222957-75222976 Msa0958960:intron 25.0%
! ATTGCATGATCAACATTAAA+TGG - chr6_3:75223159-75223178 Msa0958960:CDS 25.0%
!! TAGATTTTAGACGTAATTCT+TGG + chr6_3:75223189-75223208 None:intergenic 25.0%
! AAATCTATGAGAGTAGTAAT+TGG - chr6_3:75223202-75223221 Msa0958960:CDS 25.0%
!!! AGGCATTTTGCTTTATTTAA+TGG - chr6_3:75223584-75223603 Msa0958960:five_prime_UTR 25.0%
!!! ATTTTAGTGCATGAATAGTT+TGG - chr6_3:75216354-75216373 Msa0958960:intron 25.0%
AAACAAGAACCTGAAATGAA+TGG - chr6_3:75212882-75212901 Msa0958960:three_prime_UTR 30.0%
!! TTATTTCTGCCATTCATTTC+AGG + chr6_3:75212894-75212913 Msa0958950:intron 30.0%
AACCAATCAAATGCATACAT+TGG - chr6_3:75212998-75213017 Msa0958960:intron 30.0%
ATCCAATGTATGCATTTGAT+TGG + chr6_3:75213003-75213022 Msa0958950:intron 30.0%
AGTAGTTACTATATGATGCA+TGG + chr6_3:75213097-75213116 Msa0958950:intron 30.0%
ACATGAGAACAAAACATTGT+TGG + chr6_3:75213427-75213446 Msa0958950:intron 30.0%
AGTGCATATTTGAATTATCG+CGG - chr6_3:75213737-75213756 Msa0958960:intron 30.0%
AAAAACACTCAATGCATGTT+TGG + chr6_3:75213977-75213996 Msa0958950:intron 30.0%
!! TGGTTCTTTTGATAATTTGG+TGG - chr6_3:75214055-75214074 Msa0958960:intron 30.0%
AGAGTATGTGATTTCTACTT+TGG - chr6_3:75214163-75214182 Msa0958960:intron 30.0%
ATTGAGAACATGAGTTAAAG+GGG + chr6_3:75214191-75214210 Msa0958950:intron 30.0%
GATTGAGAACATGAGTTAAA+GGG + chr6_3:75214192-75214211 Msa0958950:intron 30.0%
TGATTGAGAACATGAGTTAA+AGG + chr6_3:75214193-75214212 Msa0958950:intron 30.0%
!!! GTCATTGTGACTTTTTTTTG+AGG + chr6_3:75214564-75214583 Msa0958950:intron 30.0%
! ACAATGACAATGCATGTTTT+TGG - chr6_3:75214576-75214595 Msa0958960:intron 30.0%
!! GAGTCTTATTCTACAATGTA+GGG + chr6_3:75215122-75215141 Msa0958950:CDS 30.0%
CTACATTGTAGAATAAGACT+CGG - chr6_3:75215121-75215140 Msa0958960:intron 30.0%
CTAACTCATCTTTACAAAAC+CGG - chr6_3:75215209-75215228 Msa0958960:intron 30.0%
!!! TTTTTGAAACGAATGTAGAC+CGG - chr6_3:75215352-75215371 Msa0958960:intron 30.0%
TCTACATAGTGAGATATGAT+TGG + chr6_3:75215590-75215609 Msa0958950:intron 30.0%
! TTATGCCAAATGAACCATTT+TGG - chr6_3:75215714-75215733 Msa0958960:intron 30.0%
! TAGCTTGTGAAAACAATGTT+AGG - chr6_3:75215803-75215822 Msa0958960:intron 30.0%
AATAAGCTGAAAACAGCTTA+CGG + chr6_3:75215835-75215854 Msa0958950:intron 30.0%
GTATTGTACACATTCAAGAT+TGG + chr6_3:75216295-75216314 Msa0958950:CDS 30.0%
ACTAAAATTCAAGAGTGAGT+TGG + chr6_3:75216342-75216361 Msa0958950:CDS 30.0%
CCTAAGCTGAATTAATAGAA+AGG + chr6_3:75216697-75216716 Msa0958950:CDS 30.0%
CCTTTCTATTAATTCAGCTT+AGG - chr6_3:75216694-75216713 Msa0958960:intron 30.0%
TTGATAAAAACAGAACTGGT+TGG + chr6_3:75217135-75217154 Msa0958950:CDS 30.0%
! TCAACAGGTCTTTAACATTT+TGG + chr6_3:75217160-75217179 Msa0958950:CDS 30.0%
!! GTCCACTAAGTTTGTTAATT+TGG + chr6_3:75217231-75217250 Msa0958950:CDS 30.0%
GACCGTCAATATACATTTAA+GGG - chr6_3:75217248-75217267 Msa0958960:intron 30.0%
TGCCCTTAAATGTATATTGA+CGG + chr6_3:75217253-75217272 Msa0958950:CDS 30.0%
AGGTATTTATAGCCTTTCTT+GGG + chr6_3:75217409-75217428 Msa0958950:CDS 30.0%
TACTCACAACAAGTACATTT+AGG - chr6_3:75217491-75217510 Msa0958960:intron 30.0%
!! GAAATATAGGTTGATCTTCT+TGG + chr6_3:75217654-75217673 Msa0958950:CDS 30.0%
CTACTCGTCAAAAATGAAAA+AGG + chr6_3:75217849-75217868 Msa0958950:CDS 30.0%
CAATCAACCATCTTAATAAC+TGG - chr6_3:75218230-75218249 Msa0958960:intron 30.0%
! AACAATTCAACTGGTACTTT+TGG + chr6_3:75218341-75218360 Msa0958950:CDS 30.0%
AGGTTGAAATATGGATAGTT+TGG + chr6_3:75218421-75218440 Msa0958950:intron 30.0%
AACTATCCATATTTCAACCT+CGG - chr6_3:75218421-75218440 Msa0958960:intron 30.0%
AAAATACCGAGGTTGAAATA+TGG + chr6_3:75218430-75218449 Msa0958950:intron 30.0%
!! TTCTTAACTCTAAAATACCG+AGG + chr6_3:75218441-75218460 Msa0958950:intron 30.0%
AATTGGAGATGTTTACTTTG+AGG + chr6_3:75218559-75218578 Msa0958950:intron 30.0%
!! ATTCGAAGATTTGTTAACTG+GGG + chr6_3:75218804-75218823 Msa0958950:intron 30.0%
!!! ACTTAGTTGTTTTGAAGAAG+AGG + chr6_3:75218921-75218940 Msa0958950:intron 30.0%
AATCAAGTGCAAAAAGTTCA+AGG + chr6_3:75218980-75218999 Msa0958950:intron 30.0%
CATGCATATATCTTCTTGTA+TGG - chr6_3:75219195-75219214 Msa0958960:intron 30.0%
!! GATTTGAATGAAAGCATTGA+GGG + chr6_3:75219349-75219368 Msa0958950:intron 30.0%
!! TGATTTGAATGAAAGCATTG+AGG + chr6_3:75219350-75219369 Msa0958950:intron 30.0%
ACAAGAATATGAGATTGACT+TGG + chr6_3:75219425-75219444 Msa0958950:CDS 30.0%
! TTCATTTTCAATAGGTTCCT+TGG - chr6_3:75219597-75219616 Msa0958960:intron 30.0%
!! CATAAATTTTGCTGTCTTCT+TGG + chr6_3:75219665-75219684 None:intergenic 30.0%
GTGAGAGAAATGAAATCAAA+AGG + chr6_3:75219702-75219721 None:intergenic 30.0%
! CAAGAATATGAGATTGACTT+GGG + chr6_3:75219424-75219443 Msa0958950:CDS 30.0%
ACAAGAATATGAGATTGACT+TGG + chr6_3:75219425-75219444 Msa0958950:CDS 30.0%
ATGAAAAGGAAACATTTCCA+AGG + chr6_3:75219831-75219850 None:intergenic 30.0%
CCAAAAAGCTATTCATGAAA+AGG + chr6_3:75219845-75219864 None:intergenic 30.0%
! CCTTTTCATGAATAGCTTTT+TGG - chr6_3:75219842-75219861 Msa0958960:intron 30.0%
CCAAATTGCAATTGAGAAAT+TGG + chr6_3:75219914-75219933 None:intergenic 30.0%
CCAATTTCTCAATTGCAATT+TGG - chr6_3:75219911-75219930 Msa0958960:intron 30.0%
TCGAATATTGCAAGAGAAAA+AGG + chr6_3:75219986-75220005 None:intergenic 30.0%
AGAATCATGTTCACAAATGT+TGG + chr6_3:75220314-75220333 None:intergenic 30.0%
AAAATCTCTCAACTTCAACA+AGG + chr6_3:75220355-75220374 None:intergenic 30.0%
! TGAGTTTAACTTAGTTGGTA+AGG - chr6_3:75220782-75220801 Msa0958960:intron 30.0%
!! GGTATTGAGGTATTTTTGAA+TGG + chr6_3:75221128-75221147 None:intergenic 30.0%
AACATACCTCAATATTCTCT+TGG - chr6_3:75221155-75221174 Msa0958960:CDS 30.0%
CACAAAAAAGATTGAAGAGA+TGG + chr6_3:75221341-75221360 None:intergenic 30.0%
ATGGTAATTTATGTGAGTTG+AGG + chr6_3:75221465-75221484 None:intergenic 30.0%
TACATAAAGGTAAAGAGTGA+TGG + chr6_3:75221484-75221503 None:intergenic 30.0%
GTTGAAACACATTGTTTATC+AGG - chr6_3:75222875-75222894 Msa0958960:intron 30.0%
TAAAACACATTGAAACACCT+TGG - chr6_3:75222928-75222947 Msa0958960:intron 30.0%
TTTACTTAAAGCTATCTCCA+AGG + chr6_3:75222948-75222967 None:intergenic 30.0%
AATGTTGATCATGCAATGAT+TGG + chr6_3:75223156-75223175 None:intergenic 30.0%
! TACCAAGTTGAAGATCATAT+TGG + chr6_3:75223311-75223330 None:intergenic 30.0%
TTGTGTGACTTAAGTCTATT+AGG + chr6_3:75223384-75223403 None:intergenic 30.0%
! TGTTGTACTGATATATCAGT+AGG + chr6_3:75223469-75223488 None:intergenic 30.0%
ACTTTGCATTGAATGCATAT+CGG + chr6_3:75223504-75223523 None:intergenic 30.0%
GTATTGTACACATTCAAGAT+TGG + chr6_3:75216295-75216314 Msa0958950:CDS 30.0%
CATCTCACTTGACATTATTA+AGG - chr6_3:75223564-75223583 Msa0958960:five_prime_UTR 30.0%
ACTAAAATTCAAGAGTGAGT+TGG + chr6_3:75216342-75216361 Msa0958950:CDS 30.0%
ATGTGGTTAGATTCTGTGTT+TGG + chr6_3:75212944-75212963 Msa0958950:intron 35.0%
TCATGATCATGGTCATTGAT+TGG + chr6_3:75213045-75213064 Msa0958950:intron 35.0%
ACTATATGATGCATGGTTAG+TGG + chr6_3:75213090-75213109 Msa0958950:intron 35.0%
AAGATTCCTAAAACCAACCA+TGG - chr6_3:75213180-75213199 Msa0958960:intron 35.0%
GGAAATCCAGTTAAATTCAG+TGG - chr6_3:75213256-75213275 Msa0958960:intron 35.0%
TTAAATTCAGTGGTGCAACT+AGG - chr6_3:75213266-75213285 Msa0958960:intron 35.0%
!! GAAAAGAGCAACAGTTTTGA+AGG + chr6_3:75213320-75213339 Msa0958950:intron 35.0%
! AATCACAGTGTGTGGTATTT+TGG - chr6_3:75213772-75213791 Msa0958960:intron 35.0%
TTTACGCATGGTTGGATTAA+TGG + chr6_3:75213859-75213878 Msa0958950:intron 35.0%
AGTTGCGTTAAAATCACGTT+TGG - chr6_3:75213884-75213903 Msa0958960:intron 35.0%
!! TCTTTTGATAATTTGGTGGC+AGG - chr6_3:75214059-75214078 Msa0958960:intron 35.0%
TAGAAATCACATACTCTCCA+GGG + chr6_3:75214160-75214179 Msa0958950:intron 35.0%
AAACCTAAAATGCAGTGGTA+GGG + chr6_3:75214508-75214527 Msa0958950:intron 35.0%
TAAACCTAAAATGCAGTGGT+AGG + chr6_3:75214509-75214528 Msa0958950:intron 35.0%
ATAAGTCTCAAATTCAGTGG+CGG - chr6_3:75214641-75214660 Msa0958960:intron 35.0%
TTAATTGTGTGGCAATGCTA+TGG - chr6_3:75214832-75214851 Msa0958960:intron 35.0%
ATGCTATGGTGAATGATTGA+TGG - chr6_3:75214846-75214865 Msa0958960:intron 35.0%
! ATGGACTAATGCAGATATCA+AGG - chr6_3:75214865-75214884 Msa0958960:intron 35.0%
!! ATGAGTTGATTCATGCTAGA+TGG - chr6_3:75214890-75214909 Msa0958960:intron 35.0%
!! TGAGTTGATTCATGCTAGAT+GGG - chr6_3:75214891-75214910 Msa0958960:intron 35.0%
!! CGAGTCTTATTCTACAATGT+AGG + chr6_3:75215123-75215142 Msa0958950:CDS 35.0%
GTCTCTATCTTCAATCAATG+TGG - chr6_3:75215265-75215284 Msa0958960:intron 35.0%
TCTTCAATCAATGTGGAACT+TGG - chr6_3:75215272-75215291 Msa0958960:intron 35.0%
ACAGCAACGATAAGATTGAT+GGG + chr6_3:75215427-75215446 Msa0958950:intron 35.0%
AACAGCAACGATAAGATTGA+TGG + chr6_3:75215428-75215447 Msa0958950:intron 35.0%
GAGTACTACAGAATTACCAA+TGG - chr6_3:75215478-75215497 Msa0958960:intron 35.0%
CTACAGAATTACCAATGGAT+TGG - chr6_3:75215483-75215502 Msa0958960:intron 35.0%
AATGCAAAAAGGCTCCAAAA+TGG + chr6_3:75215731-75215750 Msa0958950:intron 35.0%
TTCCAATTCCTGCAAGAAAT+AGG + chr6_3:75215992-75216011 Msa0958950:intron 35.0%
! TCACTTTAAGAATTGCAGCT+TGG + chr6_3:75216071-75216090 Msa0958950:intron 35.0%
AGCTGCAATTCTTAAAGTGA+AGG - chr6_3:75216071-75216090 Msa0958960:intron 35.0%
GTGAGCAAATTGTTTCCAAA+AGG + chr6_3:75216204-75216223 Msa0958950:intron 35.0%
! AATTTGCTCACTGTCATTTC+TGG - chr6_3:75216213-75216232 Msa0958960:intron 35.0%
! TCATTTCTGGAAATGTTGAG+AGG - chr6_3:75216226-75216245 Msa0958960:intron 35.0%
! CATTTCTGGAAATGTTGAGA+GGG - chr6_3:75216227-75216246 Msa0958960:intron 35.0%
GATTTGATTCATCACAGAGT+TGG + chr6_3:75216255-75216274 Msa0958950:CDS 35.0%
TATATGTTAGAACAGCAACC+CGG - chr6_3:75216564-75216583 Msa0958960:intron 35.0%
TAGTTACTCATAAGTGGGTA+TGG + chr6_3:75216776-75216795 Msa0958950:CDS 35.0%
TACCCACTTATGAGTAACTA+TGG - chr6_3:75216776-75216795 Msa0958960:intron 35.0%
ACCCACTTATGAGTAACTAT+GGG - chr6_3:75216777-75216796 Msa0958960:intron 35.0%
ATACACAATGTTACATACGG+AGG - chr6_3:75216886-75216905 Msa0958960:intron 35.0%
TAACACTACTTCTAGCAAAG+AGG - chr6_3:75217042-75217061 Msa0958960:intron 35.0%
ATAAAAACAGAACTGGTTGG+TGG + chr6_3:75217132-75217151 Msa0958950:CDS 35.0%
!! GGAGTTGATAAAAACAGAAC+TGG + chr6_3:75217139-75217158 Msa0958950:CDS 35.0%
GGACCGTCAATATACATTTA+AGG - chr6_3:75217247-75217266 Msa0958960:intron 35.0%
! AATGCTCTAAACGTGACTTA+GGG - chr6_3:75217346-75217365 Msa0958960:intron 35.0%
! GAGGTATTTATAGCCTTTCT+TGG + chr6_3:75217410-75217429 Msa0958950:CDS 35.0%
CTATAAATACCTCTCATGAG+AGG - chr6_3:75217417-75217436 Msa0958960:intron 35.0%
! GATACTTTCTGGTATGTATC+AGG + chr6_3:75217975-75217994 Msa0958950:intron 35.0%
! ATCTTCTAATGAAGGCCTTT+TGG - chr6_3:75218183-75218202 Msa0958960:intron 35.0%
TGTGGATCCAGTTATTAAGA+TGG + chr6_3:75218240-75218259 Msa0958950:intron 35.0%
GCAAAAGATGAAATGTTGTG+TGG + chr6_3:75218258-75218277 Msa0958950:intron 35.0%
! TTTGAGGTATGTGTTGGATT+TGG + chr6_3:75218543-75218562 Msa0958950:intron 35.0%
!! GTTTACTTTGAGGTATGTGT+TGG + chr6_3:75218549-75218568 Msa0958950:intron 35.0%
GGCAATGGTATACAAGAAAT+TGG + chr6_3:75218576-75218595 Msa0958950:intron 35.0%
TCCAATATTTGAAGACTTCG+AGG + chr6_3:75218597-75218616 Msa0958950:intron 35.0%
! AAGTTTTCATCACCAAACGT+TGG + chr6_3:75218660-75218679 Msa0958950:intron 35.0%
! TATAAGCAAAGCACTTCTGA+AGG + chr6_3:75218723-75218742 Msa0958950:intron 35.0%
TTCTTCACTAACAAGAAAGG+TGG + chr6_3:75218768-75218787 Msa0958950:intron 35.0%
CAAAGAACATAGCAAACAAC+TGG + chr6_3:75218867-75218886 Msa0958950:intron 35.0%
! CCTTTGAGAGATGAAATTGA+AGG + chr6_3:75219223-75219242 Msa0958950:intron 35.0%
CCTTCAATTTCATCTCTCAA+AGG - chr6_3:75219220-75219239 Msa0958960:intron 35.0%
TCAAGAATTTCTCTTTGCCA+AGG + chr6_3:75219617-75219636 None:intergenic 35.0%
GGCAAAGAGAAATTCTTGAT+TGG - chr6_3:75219618-75219637 Msa0958960:intron 35.0%
TGTCTTCTTGGAGACAATTA+AGG + chr6_3:75219653-75219672 None:intergenic 35.0%
TGTGATGATAACTTCTTCCT+TGG - chr6_3:75219811-75219830 Msa0958960:intron 35.0%
AAAGGAACTAAGCATCATAC+AGG + chr6_3:75219944-75219963 None:intergenic 35.0%
! GCTTAGTTCCTTTCTTTTCT+TGG - chr6_3:75219951-75219970 Msa0958960:intron 35.0%
GAAGAGGAAGAGAATGAAAA+TGG + chr6_3:75220087-75220106 None:intergenic 35.0%
! TCTTCCGATGAAGATTTTGT+CGG - chr6_3:75220180-75220199 Msa0958960:intron 35.0%
TTCTCCGACAAAATCTTCAT+CGG + chr6_3:75220187-75220206 None:intergenic 35.0%
! AAGATTTTGTCGGAGAAGAA+AGG - chr6_3:75220190-75220209 Msa0958960:intron 35.0%
! AGATTTTGTCGGAGAAGAAA+GGG - chr6_3:75220191-75220210 Msa0958960:intron 35.0%
! AATGCATGAAGTATTTCCTG+AGG + chr6_3:75220232-75220251 None:intergenic 35.0%
TTGGTCAACATTGATGAATG+AGG + chr6_3:75220283-75220302 None:intergenic 35.0%
GGACATTTCATAACATATGC+AGG - chr6_3:75220803-75220822 Msa0958960:intron 35.0%
GGCTAGAAATTCATTTCGTA+AGG + chr6_3:75220865-75220884 None:intergenic 35.0%
!!! CTCTTTTTTCATGTGAGATG+AGG + chr6_3:75221258-75221277 None:intergenic 35.0%
TTTGCATCTTACCAAAAGCA+AGG - chr6_3:75221281-75221300 Msa0958960:intron 35.0%
ATGGCAATATTATGTGACTG+TGG - chr6_3:75221364-75221383 Msa0958960:intron 35.0%
! TTTTCCACTATGTCATGTTG+TGG - chr6_3:75221394-75221413 Msa0958960:intron 35.0%
CCAAACAGCTAGTTACATAA+AGG + chr6_3:75221497-75221516 None:intergenic 35.0%
CCTTTATGTAACTAGCTGTT+TGG - chr6_3:75221494-75221513 Msa0958960:intron 35.0%
GAAATAAAAGATCGCCTTCA+AGG + chr6_3:75221589-75221608 None:intergenic 35.0%
ATATCTCGTTCAACCTTTCA+AGG - chr6_3:75221725-75221744 Msa0958960:intron 35.0%
AAAAAACAGGAGTCCTTGAA+AGG + chr6_3:75221741-75221760 None:intergenic 35.0%
!! TTTCTCTTGAGCTTTGTTCA+TGG - chr6_3:75221768-75221787 Msa0958960:intron 35.0%
AATATCCTCTCCAACTATGT+TGG - chr6_3:75223033-75223052 Msa0958960:intron 35.0%
AGAGTATGTTACATAGTGTG+CGG + chr6_3:75223071-75223090 None:intergenic 35.0%
!! ACATTTTAACGCGTTCCTTT+CGG + chr6_3:75223096-75223115 None:intergenic 35.0%
! AGATAGACTTGTTTGAGCTA+GGG + chr6_3:75223124-75223143 None:intergenic 35.0%
! AAGATAGACTTGTTTGAGCT+AGG + chr6_3:75223125-75223144 None:intergenic 35.0%
TCATGCAATGATTGGACATT+GGG + chr6_3:75223148-75223167 None:intergenic 35.0%
ATCATGCAATGATTGGACAT+TGG + chr6_3:75223149-75223168 None:intergenic 35.0%
AGATCATATTGGCGTCTATT+AGG + chr6_3:75223300-75223319 None:intergenic 35.0%
CATGAGTGTTTACACTTGAA+AGG + chr6_3:75223352-75223371 None:intergenic 35.0%
! CTTGGAATGTCTGAAATGCT+TGG - chr6_3:75213235-75213254 Msa0958960:intron 40.0%
GTTGCACCACTGAATTTAAC+TGG + chr6_3:75213265-75213284 Msa0958950:intron 40.0%
GTAGATGGAGTTGAAGATGA+AGG + chr6_3:75213298-75213317 Msa0958950:intron 40.0%
!!! GCAACAGTTTTGAAGGTAGA+TGG + chr6_3:75213313-75213332 Msa0958950:intron 40.0%
TTGAATTATCGCGGTGAGTT+TGG - chr6_3:75213746-75213765 Msa0958960:intron 40.0%
TGTGTTAGGCAAAATCAAGG+TGG + chr6_3:75213836-75213855 Msa0958950:intron 40.0%
TGGTGTGTTAGGCAAAATCA+AGG + chr6_3:75213839-75213858 Msa0958950:intron 40.0%
GGTTGGATTAATGGTGTGTT+AGG + chr6_3:75213850-75213869 Msa0958950:intron 40.0%
ACTCTTTCTTTACGCATGGT+TGG + chr6_3:75213867-75213886 Msa0958950:intron 40.0%
TGCGTTAAAATCACGTTTGG+AGG - chr6_3:75213887-75213906 Msa0958960:intron 40.0%
GTAGAAATCACATACTCTCC+AGG + chr6_3:75214161-75214180 Msa0958950:intron 40.0%
TATGTGTGTCTATGCAGCTA+TGG - chr6_3:75214265-75214284 Msa0958960:intron 40.0%
! AGCTATGGTTACGATCCTTT+TGG - chr6_3:75214280-75214299 Msa0958960:intron 40.0%
! TTTCCCTACCACTGCATTTT+AGG - chr6_3:75214502-75214521 Msa0958960:intron 40.0%
! GTTGGCTCCATATTTGTTGA+AGG + chr6_3:75214953-75214972 Msa0958950:CDS 40.0%
AACAAATATGGAGCCAACTG+TGG - chr6_3:75214955-75214974 Msa0958960:intron 40.0%
GAAGAATAGCATCTACAAGC+CGG + chr6_3:75215231-75215250 Msa0958950:CDS 40.0%
ACGATAAGATTGATGGGGAT+GGG + chr6_3:75215421-75215440 Msa0958950:intron 40.0%
AACGATAAGATTGATGGGGA+TGG + chr6_3:75215422-75215441 Msa0958950:intron 40.0%
CAGCAACGATAAGATTGATG+GGG + chr6_3:75215426-75215445 Msa0958950:intron 40.0%
AGGCTCCAAAATGGTTCATT+TGG + chr6_3:75215722-75215741 Msa0958950:intron 40.0%
! AGTTGTCACCTATTTCTTGC+AGG - chr6_3:75215981-75216000 Msa0958960:intron 40.0%
! CACCTATTTCTTGCAGGAAT+TGG - chr6_3:75215987-75216006 Msa0958960:intron 40.0%
GTGGTCCATTTGATCCATTA+GGG - chr6_3:75216028-75216047 Msa0958960:intron 40.0%
TTAAGAATTGCAGCTTGGTC+TGG + chr6_3:75216066-75216085 Msa0958950:intron 40.0%
TTGGATGAAGAAACCAAGCA+TGG + chr6_3:75216127-75216146 Msa0958950:intron 40.0%
TTCATCCAAGCTTATGTCAC+CGG - chr6_3:75216138-75216157 Msa0958960:intron 40.0%
! AAGCATCTCAGTGATCCTTT+TGG - chr6_3:75216186-75216205 Msa0958960:intron 40.0%
AGAACGCATCTGTTTAACCT+CGG - chr6_3:75216623-75216642 Msa0958960:intron 40.0%
GTTAGAGAGGTAGACACAAT+TGG + chr6_3:75216656-75216675 Msa0958950:CDS 40.0%
GCCCATAGTTACTCATAAGT+GGG + chr6_3:75216781-75216800 Msa0958950:CDS 40.0%
! ACACATTTGAAGTCCTCGAT+CGG - chr6_3:75216936-75216955 Msa0958960:intron 40.0%
! GAATGCTCTAAACGTGACTT+AGG - chr6_3:75217345-75217364 Msa0958960:intron 40.0%
AACTTAATCCCCAAGCAACT+TGG + chr6_3:75217373-75217392 Msa0958950:CDS 40.0%
CTGAAATACATGCCCAAGAA+AGG - chr6_3:75217394-75217413 Msa0958960:intron 40.0%
CTTAAGAATCCTCTCATGAG+AGG + chr6_3:75217429-75217448 Msa0958950:CDS 40.0%
CTCTCATGAGAGGATTCTTA+AGG - chr6_3:75217427-75217446 Msa0958960:intron 40.0%
! TGATCTTCTTGGTGATCAAG+TGG + chr6_3:75217643-75217662 Msa0958950:CDS 40.0%
! AAACCTCAGCTTCAGCATTT+TGG - chr6_3:75218150-75218169 Msa0958960:intron 40.0%
GTCAGCAAATCATTAGTCGT+TGG - chr6_3:75218388-75218407 Msa0958960:intron 40.0%
CATTCATGCAGTCAGTACAT+CGG + chr6_3:75218496-75218515 Msa0958950:intron 40.0%
ATTTGAAGACTTCGAGGCAA+TGG + chr6_3:75218591-75218610 Msa0958950:intron 40.0%
GCCTCGAAGTCTTCAAATAT+TGG - chr6_3:75218593-75218612 Msa0958960:intron 40.0%
AGGACATAGTATTCGTGACT+CGG + chr6_3:75218684-75218703 Msa0958950:intron 40.0%
! AAAGCACTTCTGAAGGAGTT+GGG + chr6_3:75218716-75218735 Msa0958950:intron 40.0%
CGAATATTTCATGCTCGTGT+AGG - chr6_3:75218819-75218838 Msa0958960:intron 40.0%
CAAACAACTGGACTTAGGTT+CGG + chr6_3:75218855-75218874 Msa0958950:intron 40.0%
CATAGCAAACAACTGGACTT+AGG + chr6_3:75218860-75218879 Msa0958950:intron 40.0%
CATGCGTATATCTTCCTCTA+TGG - chr6_3:75219564-75219583 Msa0958960:intron 40.0%
TGAAATACAAGGGACCATAG+AGG + chr6_3:75219581-75219600 None:intergenic 40.0%
GTCATCGTCCAAGAAAAGAA+AGG + chr6_3:75219962-75219981 None:intergenic 40.0%
GGAAGTAGAGTTACAAGAAG+AGG + chr6_3:75220103-75220122 None:intergenic 40.0%
TGCAGACGATAGAGATCATA+AGG + chr6_3:75220124-75220143 None:intergenic 40.0%
! TCTCTATCGTCTGCATTTTG+AGG - chr6_3:75220129-75220148 Msa0958960:intron 40.0%
TCCTGAGGAATCTGATTCTT+CGG + chr6_3:75220217-75220236 None:intergenic 40.0%
! ACAAATGTTGGCAAGAGCAT+TGG + chr6_3:75220302-75220321 None:intergenic 40.0%
TCAACAAGGTAGAAGCTAGA+AGG + chr6_3:75220341-75220360 None:intergenic 40.0%
CCAACTAAGTTAAACTCACG+AGG + chr6_3:75220780-75220799 None:intergenic 40.0%
! CCTCGTGAGTTTAACTTAGT+TGG - chr6_3:75220777-75220796 Msa0958960:intron 40.0%
GTGAATAAGTGCGATGTTAG+GGG + chr6_3:75220843-75220862 None:intergenic 40.0%
GGTGAATAAGTGCGATGTTA+GGG + chr6_3:75220844-75220863 None:intergenic 40.0%
AGGTGAATAAGTGCGATGTT+AGG + chr6_3:75220845-75220864 None:intergenic 40.0%
!! TATGCTTAAAGAGTGCCTCA+GGG - chr6_3:75221071-75221090 Msa0958960:CDS 40.0%
GGAGTTCCAAGAGAATATTG+AGG + chr6_3:75221164-75221183 None:intergenic 40.0%
TTGGAACTCCATCATGAAAC+TGG - chr6_3:75221174-75221193 Msa0958960:intron 40.0%
! CAAACTATGGACCTTGCTTT+TGG + chr6_3:75221295-75221314 None:intergenic 40.0%
TGAACCACAACATGACATAG+TGG + chr6_3:75221401-75221420 None:intergenic 40.0%
! ATGTGAGTTGAGGAGTAGTA+TGG + chr6_3:75221455-75221474 None:intergenic 40.0%
!! GGCGATCTTTTATTTCTCGT+AGG - chr6_3:75221593-75221612 Msa0958960:CDS 40.0%
GCTTTCGAGAAAACTACTTC+CGG - chr6_3:75221639-75221658 Msa0958960:CDS 40.0%
!! GAGATTTTTGGATGCATGGA+TGG + chr6_3:75221847-75221866 None:intergenic 40.0%
!! GGATGAGATTTTTGGATGCA+TGG + chr6_3:75221851-75221870 None:intergenic 40.0%
!! TTTTGGGTAAGCATGTCTCT+AGG - chr6_3:75222031-75222050 Msa0958960:intron 40.0%
ATGTCTCTAGGCATTCTTTG+AGG - chr6_3:75222043-75222062 Msa0958960:intron 40.0%
!!! TTTTAAGACGGAAGTGTGAG+TGG - chr6_3:75222472-75222491 Msa0958960:intron 40.0%
! GTTGCAGTCACTCATTTTAG+AGG - chr6_3:75222801-75222820 Msa0958960:intron 40.0%
!! GTCACTCATTTTAGAGGAGT+CGG - chr6_3:75222807-75222826 Msa0958960:intron 40.0%
GCAAAGGGATCATCAATGTT+TGG - chr6_3:75222973-75222992 Msa0958960:intron 40.0%
GAGTATGTTACATAGTGTGC+GGG + chr6_3:75223070-75223089 None:intergenic 40.0%
TGTAACATACTCTAGCCGAA+AGG - chr6_3:75223078-75223097 Msa0958960:intron 40.0%
! GATAGACTTGTTTGAGCTAG+GGG + chr6_3:75223123-75223142 None:intergenic 40.0%
CGCCAATATGATCTTCAACT+TGG - chr6_3:75223306-75223325 Msa0958960:CDS 40.0%
ATGAGATGATGCAGCTGATG+TGG + chr6_3:75212961-75212980 Msa0958950:intron 45.0%
CCACGTCAGATTCATGATCA+TGG + chr6_3:75213056-75213075 Msa0958950:intron 45.0%
CCATGATCATGAATCTGACG+TGG - chr6_3:75213053-75213072 Msa0958960:intron 45.0%
!!! TGGAAGCCATGGTTGGTTTT+AGG + chr6_3:75213189-75213208 Msa0958950:intron 45.0%
AAAGCAGAAAGTGGCTACTC+CGG - chr6_3:75213366-75213385 Msa0958960:intron 45.0%
TGGTGACTTACCATACCACT+TGG + chr6_3:75213407-75213426 Msa0958950:intron 45.0%
AATTATCGCGGTGAGTTTGG+CGG - chr6_3:75213749-75213768 Msa0958960:intron 45.0%
CGCAACTCTTTCTTTACGCA+TGG + chr6_3:75213871-75213890 Msa0958950:intron 45.0%
! TGATAATTTGGTGGCAGGTC+CGG - chr6_3:75214064-75214083 Msa0958960:intron 45.0%
AGAAGGATCTTCTTGCCAGA+CGG - chr6_3:75214089-75214108 Msa0958960:intron 45.0%
ACTTCTCCAGTCAAGTACTC+GGG + chr6_3:75214137-75214156 Msa0958950:intron 45.0%
GACTTCTCCAGTCAAGTACT+CGG + chr6_3:75214138-75214157 Msa0958950:intron 45.0%
GGCTTCTTGCTTAGACCAAA+AGG + chr6_3:75214298-75214317 Msa0958950:intron 45.0%
ACATACTTGGCGAAGTCTTC+GGG + chr6_3:75214319-75214338 Msa0958950:intron 45.0%
GACATACTTGGCGAAGTCTT+CGG + chr6_3:75214320-75214339 Msa0958950:intron 45.0%
TGCTGGATTCATCATTCCTG+AGG - chr6_3:75214927-75214946 Msa0958960:intron 45.0%
! CCATATTTGTTGAAGGCCTC+AGG + chr6_3:75214946-75214965 Msa0958950:CDS 45.0%
CCTGAGGCCTTCAACAAATA+TGG - chr6_3:75214943-75214962 Msa0958960:intron 45.0%
! TCCTGAAGCAGTTTGGTTCA+AGG - chr6_3:75214978-75214997 Msa0958960:intron 45.0%
ACCTTGAACCAAACTGCTTC+AGG + chr6_3:75214982-75215001 Msa0958950:CDS 45.0%
! TATCGTTGCTGTTGTTGCTG+AGG - chr6_3:75215435-75215454 Msa0958960:intron 45.0%
TGTTGCTGAGGTTGTTCTCT+TGG - chr6_3:75215447-75215466 Msa0958960:intron 45.0%
GTTGCTGAGGTTGTTCTCTT+GGG - chr6_3:75215448-75215467 Msa0958960:intron 45.0%
TTGGAAGACAAGTTTCACCC+AGG - chr6_3:75216006-75216025 Msa0958960:intron 45.0%
ATGGATCAAATGGACCACCT+GGG + chr6_3:75216026-75216045 Msa0958950:intron 45.0%
AATGGATCAAATGGACCACC+TGG + chr6_3:75216027-75216046 Msa0958950:intron 45.0%
GGTGGTCCATTTGATCCATT+AGG - chr6_3:75216027-75216046 Msa0958960:intron 45.0%
! GCTAGCCCTAATGGATCAAA+TGG + chr6_3:75216036-75216055 Msa0958950:intron 45.0%
! GGATCATTTGCTAGCCCTAA+TGG + chr6_3:75216045-75216064 Msa0958950:intron 45.0%
! CTTGCTATGTTTGCCATGCT+TGG - chr6_3:75216111-75216130 Msa0958960:intron 45.0%
TGCTTTGCTAAGTTCTCGAC+TGG + chr6_3:75216171-75216190 Msa0958950:intron 45.0%
GGCCCATAGTTACTCATAAG+TGG + chr6_3:75216782-75216801 Msa0958950:CDS 45.0%
ACAATGTTACATACGGAGGC+TGG - chr6_3:75216890-75216909 Msa0958960:intron 45.0%
AGCTGTTCAGGCTAAGACTA+TGG + chr6_3:75217109-75217128 Msa0958950:CDS 45.0%
ACTTAGGGTCCAAGTTGCTT+GGG - chr6_3:75217361-75217380 Msa0958960:intron 45.0%
! TGCATCCACTTGAGTTGTGT+CGG - chr6_3:75217716-75217735 Msa0958960:intron 45.0%
CAAATCCGACACAACTCAAG+TGG + chr6_3:75217724-75217743 Msa0958950:CDS 45.0%
TCTCCAAAATGCTGAAGCTG+AGG + chr6_3:75218156-75218175 Msa0958950:intron 45.0%
GTGGCTGCAAACAATTCAAC+TGG + chr6_3:75218350-75218369 Msa0958950:CDS 45.0%
! ATTTGCTGACTGCGTGAATG+CGG + chr6_3:75218378-75218397 Msa0958950:CDS 45.0%
CTTGTTCATGAGCCAACGTT+TGG - chr6_3:75218645-75218664 Msa0958960:intron 45.0%
! AAGGAGTTGGGAACTAGCTT+AGG + chr6_3:75218704-75218723 Msa0958950:intron 45.0%
! CAAAGCACTTCTGAAGGAGT+TGG + chr6_3:75218717-75218736 Msa0958950:intron 45.0%
!! CGAAGATTTGTTAACTGGGG+AGG + chr6_3:75218801-75218820 Msa0958950:intron 45.0%
!! CTATCGTCTGCATTTTGAGG+AGG - chr6_3:75220132-75220151 Msa0958960:intron 45.0%
!! ATAGTCCTTAAAGAGTGCCC+CGG + chr6_3:75220963-75220982 None:intergenic 45.0%
!! GTATGCTTAAAGAGTGCCTC+AGG - chr6_3:75221070-75221089 Msa0958960:CDS 45.0%
!! ATGCTTAAAGAGTGCCTCAG+GGG - chr6_3:75221072-75221091 Msa0958960:CDS 45.0%
! AACTGCCATTGCCTCTCTTT+TGG - chr6_3:75221232-75221251 Msa0958960:intron 45.0%
GAGAAAACTACTTCCGGTCT+CGG - chr6_3:75221645-75221664 Msa0958960:CDS 45.0%
TTGGCAGTGATGCAACTTGA+AGG + chr6_3:75221691-75221710 None:intergenic 45.0%
AACTACTGGTGCCTAAAGCA+TGG - chr6_3:75222602-75222621 Msa0958960:intron 45.0%
!! AATATATAAAAATTGAAATA+TGG - chr6_3:75217201-75217220 Msa0958960:intron 5.0%
!!! ATTTTTCAAAAAATAAAATA+AGG - chr6_3:75218291-75218310 Msa0958960:intron 5.0%
!! TTATTAGTAATAATAATTAA+TGG + chr6_3:75222312-75222331 None:intergenic 5.0%
AGAAGCAGCAATGGAAGCCA+TGG + chr6_3:75213200-75213219 Msa0958950:intron 50.0%
AGCTGCTGTAGAAGCAGCAA+TGG + chr6_3:75213209-75213228 Msa0958950:intron 50.0%
TCTACAGCAGCTGCTTCACT+TGG - chr6_3:75213217-75213236 Msa0958960:intron 50.0%
! GAGGTGCGGCTTTCTTCTTT+TGG + chr6_3:75213342-75213361 Msa0958950:intron 50.0%
TTTCTGCTTTGGTGGAGGTG+CGG + chr6_3:75213356-75213375 Msa0958950:intron 50.0%
ACCTCCACCAAAGCAGAAAG+TGG - chr6_3:75213357-75213376 Msa0958960:intron 50.0%
! GTAGCCACTTTCTGCTTTGG+TGG + chr6_3:75213364-75213383 Msa0958950:intron 50.0%
! GGAGTAGCCACTTTCTGCTT+TGG + chr6_3:75213367-75213386 Msa0958950:intron 50.0%
TTTGGCGGAATCACAGTGTG+TGG - chr6_3:75213764-75213783 Msa0958960:intron 50.0%
GGCAAGAAGATCCTTCTGTC+CGG + chr6_3:75214086-75214105 Msa0958950:intron 50.0%
CTTCTCCAGTCAAGTACTCG+GGG + chr6_3:75214136-75214155 Msa0958950:intron 50.0%
TACTTGACTGGAGAAGTCCC+TGG - chr6_3:75214140-75214159 Msa0958960:intron 50.0%
CATGCTAGATGGGCAATGCT+TGG - chr6_3:75214901-75214920 Msa0958960:intron 50.0%
AACTGCTTCAGGACCACAGT+TGG + chr6_3:75214971-75214990 Msa0958950:CDS 50.0%
ACTGTGGTCCTGAAGCAGTT+TGG - chr6_3:75214971-75214990 Msa0958960:intron 50.0%
ACCGGAGCTCTTCTTCTTGA+CGG - chr6_3:75215370-75215389 Msa0958960:intron 50.0%
! GGGGGTACGTTGAACTACTT+CGG - chr6_3:75215391-75215410 Msa0958960:intron 50.0%
CTAACCTCAAACACGCTCAC+AGG + chr6_3:75215786-75215805 Msa0958950:intron 50.0%
GAAGACAAGTTTCACCCAGG+TGG - chr6_3:75216009-75216028 Msa0958960:intron 50.0%
CTTCTCCGGTGACATAAGCT+TGG + chr6_3:75216146-75216165 Msa0958950:intron 50.0%
CAAGCTTATGTCACCGGAGA+AGG - chr6_3:75216144-75216163 Msa0958960:intron 50.0%
ACACAATTGGCTGAACTCCG+AGG + chr6_3:75216643-75216662 Msa0958950:CDS 50.0%
TAGTCGCACTGCAGTTAGAG+AGG + chr6_3:75216669-75216688 Msa0958950:CDS 50.0%
ATGTTACATACGGAGGCTGG+TGG - chr6_3:75216893-75216912 Msa0958960:intron 50.0%
! CATTTGAAGTCCTCGATCGG+AGG - chr6_3:75216939-75216958 Msa0958960:intron 50.0%
! CTTCTAGAAGCCTTCTGAGC+CGG + chr6_3:75217319-75217338 Msa0958950:CDS 50.0%
GACTTAGGGTCCAAGTTGCT+TGG - chr6_3:75217360-75217379 Msa0958960:intron 50.0%
CTTAGGGTCCAAGTTGCTTG+GGG - chr6_3:75217362-75217381 Msa0958960:intron 50.0%
!! CACCTCAAAGTGTTGCTGCA+TGG - chr6_3:75217560-75217579 Msa0958960:intron 50.0%
AGCCATGCAGCAACACTTTG+AGG + chr6_3:75217565-75217584 Msa0958950:CDS 50.0%
!! TCAAAGTGTTGCTGCATGGC+TGG - chr6_3:75217564-75217583 Msa0958960:intron 50.0%
! TTTGCTGACTGCGTGAATGC+GGG + chr6_3:75218377-75218396 Msa0958950:CDS 50.0%
GCCGAAGAATCAGATTCCTC+AGG - chr6_3:75220213-75220232 Msa0958960:intron 50.0%
GAAATGTTAACGAGTGCCCC+CGG - chr6_3:75220941-75220960 Msa0958960:intron 50.0%
AAATGTTAACGAGTGCCCCC+GGG - chr6_3:75220942-75220961 Msa0958960:intron 50.0%
!! TAGTCCTTAAAGAGTGCCCC+GGG + chr6_3:75220962-75220981 None:intergenic 50.0%
TGAGGCCAAAAGAGAGGCAA+TGG + chr6_3:75221240-75221259 None:intergenic 50.0%
GTGAGATGAGGCCAAAAGAG+AGG + chr6_3:75221246-75221265 None:intergenic 50.0%
ATTCCTCGAGACGTCCTTGA+AGG - chr6_3:75221572-75221591 Msa0958960:CDS 50.0%
ACCATTGTTCATGCCGAGAC+CGG + chr6_3:75221661-75221680 None:intergenic 50.0%
TCAGTGCGGACCAACATAGT+TGG + chr6_3:75223046-75223065 None:intergenic 50.0%
TCCTCACGCTTTGCAAGAAG+TGG - chr6_3:75223241-75223260 Msa0958960:CDS 50.0%
GCAGCAATGGAAGCCATGGT+TGG + chr6_3:75213196-75213215 Msa0958950:intron 55.0%
! GCCACTTTCTGCTTTGGTGG+AGG + chr6_3:75213361-75213380 Msa0958950:intron 55.0%
GAGGAACTCGCCAAGTGGTA+TGG - chr6_3:75213394-75213413 Msa0958960:intron 55.0%
CTTCTTGCCAGACGGTCTCT+TGG - chr6_3:75214097-75214116 Msa0958960:intron 55.0%
GATCTGTCCAAGAGACCGTC+TGG + chr6_3:75214107-75214126 Msa0958950:intron 55.0%
GAGATCCCCGAGTACTTGAC+TGG - chr6_3:75214128-75214147 Msa0958960:intron 55.0%
CCCGTCAAGAAGAAGAGCTC+CGG + chr6_3:75215374-75215393 Msa0958950:intron 55.0%
CCGGAGCTCTTCTTCTTGAC+GGG - chr6_3:75215371-75215390 Msa0958960:intron 55.0%
CGGAGCTCTTCTTCTTGACG+GGG - chr6_3:75215372-75215391 Msa0958960:intron 55.0%
GGAGCTCTTCTTCTTGACGG+GGG - chr6_3:75215373-75215392 Msa0958960:intron 55.0%
GCTGAGGTTGTTCTCTTGGG+AGG - chr6_3:75215451-75215470 Msa0958960:intron 55.0%
AGCACCTGTGAGCGTGTTTG+AGG - chr6_3:75215779-75215798 Msa0958960:intron 55.0%
GTTCTCGACTGGACCTTCTC+CGG + chr6_3:75216160-75216179 Msa0958950:intron 55.0%
! CCTCGATCGGAGGCTTTTGT+CGG - chr6_3:75216949-75216968 Msa0958960:intron 55.0%
! CTCGATCGGAGGCTTTTGTC+GGG - chr6_3:75216950-75216969 Msa0958960:intron 55.0%
! TCGATCGGAGGCTTTTGTCG+GGG - chr6_3:75216951-75216970 Msa0958960:intron 55.0%
!! ACTGGTTGGTGGAGCTGTTC+AGG + chr6_3:75217121-75217140 Msa0958950:CDS 55.0%
! GGCACAATCGCCCTCTAGAA+GGG - chr6_3:75217269-75217288 Msa0958960:intron 55.0%
! TGGCTGGTGCATGGTGATGA+AGG - chr6_3:75217580-75217599 Msa0958960:intron 55.0%
! GGCTGGTGCATGGTGATGAA+GGG - chr6_3:75217581-75217600 Msa0958960:intron 55.0%
! TTGCTGACTGCGTGAATGCG+GGG + chr6_3:75218376-75218395 Msa0958950:CDS 55.0%
CTGGACTTAGGTTCGGAACG+CGG + chr6_3:75218848-75218867 Msa0958950:intron 55.0%
AATGTTAACGAGTGCCCCCG+GGG - chr6_3:75220943-75220962 Msa0958960:intron 55.0%
!! AGTCCTTAAAGAGTGCCCCG+GGG + chr6_3:75220961-75220980 None:intergenic 55.0%
CTTGTTAACGAGTGCCCCTG+AGG + chr6_3:75221089-75221108 None:intergenic 55.0%
TCCGGTCTCGGCATGAACAA+TGG - chr6_3:75221657-75221676 Msa0958960:CDS 55.0%
GCGGACCAACATAGTTGGAG+AGG + chr6_3:75223041-75223060 None:intergenic 55.0%
CATAGTGTGCGGGATCAGTG+CGG + chr6_3:75223060-75223079 None:intergenic 55.0%
GCCACTTCTTGCAAAGCGTG+AGG + chr6_3:75223245-75223264 None:intergenic 55.0%
!! TGGGCAATGCTTGGTGCTGC+TGG - chr6_3:75214910-75214929 Msa0958960:intron 60.0%
CCGACAAAAGCCTCCGATCG+AGG + chr6_3:75216952-75216971 Msa0958950:CDS 60.0%
GGGCACAATCGCCCTCTAGA+AGG - chr6_3:75217268-75217287 Msa0958960:intron 60.0%
! ATCGCCCTCTAGAAGGGCTC+CGG - chr6_3:75217275-75217294 Msa0958960:intron 60.0%
TCTGAGCCGGCGTCTTTAGG+AGG + chr6_3:75217306-75217325 Msa0958950:CDS 60.0%
CCTTCTGAGCCGGCGTCTTT+AGG + chr6_3:75217309-75217328 Msa0958950:CDS 60.0%
!! CCTAAAGACGCCGGCTCAGA+AGG - chr6_3:75217306-75217325 Msa0958960:intron 60.0%
GTTGCTGCATGGCTGGTGCA+TGG - chr6_3:75217571-75217590 Msa0958960:intron 60.0%
CTGCGTGAATGCGGGGATTG+TGG + chr6_3:75218369-75218388 Msa0958950:CDS 60.0%
!! GTCCTTAAAGAGTGCCCCGG+GGG + chr6_3:75220960-75220979 None:intergenic 60.0%
TCGCCTTCAAGGACGTCTCG+AGG + chr6_3:75221578-75221597 None:intergenic 60.0%
CAAGAAGTGGCTGCTGCAGC+AGG - chr6_3:75223254-75223273 Msa0958960:CDS 60.0%
TTGGCGAGTTCCTCGCTGGC+CGG + chr6_3:75213388-75213407 Msa0958950:intron 65.0%
CCACTTGGCGAGTTCCTCGC+TGG + chr6_3:75213392-75213411 Msa0958950:intron 65.0%
CCAGCGAGGAACTCGCCAAG+TGG - chr6_3:75213389-75213408 Msa0958960:intron 65.0%
TGGTGGCAGGTCCGGACAGA+AGG - chr6_3:75214072-75214091 Msa0958960:intron 65.0%
! GCGTCTTTAGGAGGACGCGC+CGG + chr6_3:75217297-75217316 Msa0958950:CDS 65.0%
GCGCGTCCTCCTAAAGACGC+CGG - chr6_3:75217297-75217316 Msa0958960:intron 65.0%
! TGCCCCCGGGGCACTCTTTA+AGG - chr6_3:75220955-75220974 Msa0958960:intron 65.0%
AGTGGCTACTCCGGCCAGCG+AGG - chr6_3:75213375-75213394 Msa0958960:intron 70.0%
CGCGCCGGAGCCCTTCTAGA+GGG + chr6_3:75217282-75217301 Msa0958950:CDS 70.0%
ACGCGCCGGAGCCCTTCTAG+AGG + chr6_3:75217283-75217302 Msa0958950:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 75212846 75223710 75212846 ID=Msa0958960;Name=Msa0958960
chr6_3 mRNA 75212846 75223710 75212846 ID=Msa0958960-mRNA-1;Parent=Msa0958960;Name=Msa0958960-mRNA-1;_AED=0.07;_eAED=0.07;_QI=353|1|1|1|0.83|0.71|7|197|289
chr6_3 exon 75212846 75213002 75212846 ID=Msa0958960-mRNA-1:exon:13456;Parent=Msa0958960-mRNA-1
chr6_3 exon 75220253 75220553 75220253 ID=Msa0958960-mRNA-1:exon:13455;Parent=Msa0958960-mRNA-1
chr6_3 exon 75221052 75221186 75221052 ID=Msa0958960-mRNA-1:exon:13454;Parent=Msa0958960-mRNA-1
chr6_3 exon 75221557 75221677 75221557 ID=Msa0958960-mRNA-1:exon:13453;Parent=Msa0958960-mRNA-1
chr6_3 exon 75222224 75222274 75222224 ID=Msa0958960-mRNA-1:exon:13452;Parent=Msa0958960-mRNA-1
chr6_3 exon 75222391 75222475 75222391 ID=Msa0958960-mRNA-1:exon:13451;Parent=Msa0958960-mRNA-1
chr6_3 exon 75223141 75223710 75223141 ID=Msa0958960-mRNA-1:exon:13450;Parent=Msa0958960-mRNA-1
chr6_3 five_prime_UTR 75223358 75223710 75223358 ID=Msa0958960-mRNA-1:five_prime_utr;Parent=Msa0958960-mRNA-1
chr6_3 CDS 75223141 75223357 75223141 ID=Msa0958960-mRNA-1:cds;Parent=Msa0958960-mRNA-1
chr6_3 CDS 75222391 75222475 75222391 ID=Msa0958960-mRNA-1:cds;Parent=Msa0958960-mRNA-1
chr6_3 CDS 75222224 75222274 75222224 ID=Msa0958960-mRNA-1:cds;Parent=Msa0958960-mRNA-1
chr6_3 CDS 75221557 75221677 75221557 ID=Msa0958960-mRNA-1:cds;Parent=Msa0958960-mRNA-1
chr6_3 CDS 75221052 75221186 75221052 ID=Msa0958960-mRNA-1:cds;Parent=Msa0958960-mRNA-1
chr6_3 CDS 75220293 75220553 75220293 ID=Msa0958960-mRNA-1:cds;Parent=Msa0958960-mRNA-1
chr6_3 three_prime_UTR 75220253 75220292 75220253 ID=Msa0958960-mRNA-1:three_prime_utr;Parent=Msa0958960-mRNA-1
chr6_3 three_prime_UTR 75212846 75213002 75212846 ID=Msa0958960-mRNA-1:three_prime_utr;Parent=Msa0958960-mRNA-1
Gene Sequence

>Msa0958960

ATGGCTTCCATTGCTGCTTCTACAGCAGCTGCTTCACTTGGAATGTCTGAAATGCTTGGAAATCCAGTTAAATTCAGTGGTGCAACTAGGTCTGTTCCTTCATCTTCAACTCCATCTACCTTCAAAACTGTTGCTCTTTTCCAAAAGAAGAAAGCCGCACCTCCACCAAAGCAGAAAGTGGCTACTCCGGCCAGCGAGGAACTCGCCAAGTGGTATGGTCCGGACAGAAGGATCTTCTTGCCAGACGGTCTCTTGGACAGATCTGAGATCCCCGAGTACTTGACTGGAGAAGTCCCTGGAGACTATGGTTACGATCCTTTTGGTCTAAGCAAGAAGCCCGAAGACTTCGCCAAATATCAAGGATATGAGTTGATTCATGCTAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATATGGAGCCAACTGTGGTCCTGAAGCAGTTTGGTTCAAGACCGGAGCTCTTCTTCTTGACGGGGGTACGTTGAACTACTTCGGAAAGCCCATCCCCATCAATCTTATCGTTGCTGTTGTTGCTGAGGTTGTTCTCTTGGGAGGTGCTGAGTACTACAGAATTACCAATGGATTGGAATTGGAAGACAAGTTTCACCCAGGTGGTCCATTTGATCCATTAGGGCTAGCAAATGATCCAGACCAAGCTGCAATTCTTAAAGTGAAGGAAATTAAGAATGGTAGACTTGCTATGTTTGCCATGCTTGGTTTCTTCATCCAAGCTTATGTCACCGGAGAAGGTCCAGTCGAGAACTTAGCAAAGCATCTCAGTGATCCTTTTGGAAACAATTTGCTCACTGTCATTTCTGGAAATGTTGAGAGGGTTCCAACTCTGTGA

Protein sequence

>Msa0958960

MASIAASTAAASLGMSEMLGNPVKFSGATRSVPSSSTPSTFKTVALFQKKKAAPPPKQKVATPASEELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVVAEVVLLGGAEYYRITNGLELEDKFHPGGPFDPLGLANDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNVERVPTL*