AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1396320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1396320 MtrunA17_Chr7g0269111 93.857 293 4 1 1 279 1 293 0.0 547
Msa1396320 MtrunA17_Chr7g0247061 62.807 285 92 1 4 274 62 346 7.64e-130 372
Msa1396320 MtrunA17_Chr1g0160161 58.537 287 105 1 2 274 70 356 6.22e-116 337
Msa1396320 MtrunA17_Chr3g0078501 45.810 179 83 1 2 166 73 251 2.69e-51 169
Msa1396320 MtrunA17_Chr3g0078511 61.667 60 22 1 217 276 1 59 1.60e-18 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1396320 AT3G12290.1 74.913 287 58 1 2 274 9 295 2.43e-157 440
Msa1396320 AT4G00620.1 62.718 287 93 1 2 274 69 355 1.09e-129 372
Msa1396320 AT2G38660.1 58.596 285 104 1 4 274 65 349 8.47e-116 337
Msa1396320 AT2G38660.3 58.596 285 104 1 4 274 65 349 8.47e-116 337
Msa1396320 AT2G38660.4 56.126 253 97 1 4 242 65 317 5.61e-97 288
Msa1396320 AT4G00600.1 52.265 287 87 2 2 274 55 305 2.16e-96 286
Msa1396320 AT2G38660.2 55.367 177 65 1 4 166 65 241 1.30e-63 200
Msa1396320 AT2G38660.7 49.495 99 50 0 4 102 65 163 1.68e-26 102
Msa1396320 AT2G38660.6 49.495 99 50 0 4 102 65 163 1.68e-26 102
Msa1396320 AT2G38660.5 49.495 99 50 0 4 102 65 163 1.68e-26 102
Msa1396320 AT2G38660.8 49.495 99 50 0 4 102 65 163 1.68e-26 102

Find 94 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTATGTGCTATACTTTAT+TGG 0.095499 tig0022022:-22742 Msa1396320:three_prime_UTR
TAACTAGCGCATGGACATTT+TGG 0.171159 tig0022022:+22108 None:intergenic
CGAAAAGTTAGTATATTTAT+AGG 0.211223 tig0022022:-26953 None:intergenic
TTTCTCTTCATTTATATGTT+TGG 0.237367 tig0022022:+26283 None:intergenic
TTCTCTTCATTTATATGTTT+GGG 0.275577 tig0022022:+26284 None:intergenic
GAGAAAAGCTTGCGCTGATT+TGG 0.292482 tig0022022:-26515 Msa1396320:CDS
GGTTGGATTACTCCTGTTCC+TGG 0.334532 tig0022022:-23027 Msa1396320:CDS
CTTTATTGGAATATTGCTTT+TGG 0.335457 tig0022022:-22728 Msa1396320:three_prime_UTR
CACGGCTTTGCCGTCAATTA+CGG 0.340063 tig0022022:+26761 None:intergenic
AGAAAAGCTTGCGCTGATTT+GGG 0.341343 tig0022022:-26514 Msa1396320:CDS
AGCAACATTGTGACTGTCAT+TGG 0.347400 tig0022022:+22994 None:intergenic
CAACTAGGAAGGCAGGTTAT+AGG 0.352622 tig0022022:-23092 Msa1396320:CDS
GAGGAAGCATCTAAAGTTGC+TGG 0.352957 tig0022022:-23048 Msa1396320:CDS
CATCATCATCTTCAGGTTGC+TGG 0.354269 tig0022022:-26595 Msa1396320:intron
GAAAAGTTAGTATATTTATA+GGG 0.359636 tig0022022:-26952 None:intergenic
TTCAAAAGCAGTAATGAAAC+TGG 0.393159 tig0022022:+23792 None:intergenic
AGCATTTACTTTGGGAGTGC+AGG 0.399690 tig0022022:+26163 None:intergenic
TCAGCTTCGGAAATTTGTTC+AGG 0.400499 tig0022022:+26466 None:intergenic
GCTTCACGTATGATGTCTTC+TGG 0.403074 tig0022022:+23726 None:intergenic
TTATATGTGTGCAGGTATAT+TGG 0.405081 tig0022022:-26321 Msa1396320:intron
GAGAGGGTCTCTGCCTTTCA+TGG 0.418461 tig0022022:+26193 None:intergenic
ACGTATTCTATAAAATTGTA+AGG 0.419672 tig0022022:-22835 Msa1396320:three_prime_UTR
AAGGCAGGTTATAGGCTTGT+TGG 0.427901 tig0022022:-23084 Msa1396320:CDS
TATAACCTGCCTTCCTAGTT+GGG 0.428149 tig0022022:+23094 None:intergenic
TACAGAGGGGAAGAAGAAAT+AGG 0.431509 tig0022022:+22634 None:intergenic
CTATAACCTGCCTTCCTAGT+TGG 0.431628 tig0022022:+23093 None:intergenic
ATGCTTGATTACTTCAGCTT+CGG 0.434782 tig0022022:+26453 None:intergenic
CGCAACCTTCTCCGATCAAA+TGG 0.435703 tig0022022:-26787 Msa1396320:exon
TTTCTTAGATCAAGGGAAGT+TGG 0.440672 tig0022022:-23167 Msa1396320:intron
GTGTAAGTATAAAGGGGAAA+AGG 0.444068 tig0022022:-23851 Msa1396320:intron
AATGTTGCTGAAGAATACTT+TGG 0.453034 tig0022022:-22980 Msa1396320:CDS
GGACCTACACCTCCAGGAAC+AGG 0.460733 tig0022022:+23015 None:intergenic
GGACTTGCAGTGGTGATAGT+AGG 0.466821 tig0022022:-26574 Msa1396320:CDS
AATTACGGTGGCCATTTGAT+CGG 0.474921 tig0022022:+26776 None:intergenic
AGCCTTGAGAAGGATGTTGA+TGG 0.475914 tig0022022:-26245 Msa1396320:CDS
CGTATCCTCTCTGAGAAATA+CGG 0.476330 tig0022022:-26702 Msa1396320:CDS
AGTGACTCACCATGTACATT+GGG 0.481285 tig0022022:+26409 None:intergenic
AGAAGAAATAGGTTATATAC+AGG 0.485771 tig0022022:+22645 None:intergenic
GATATTGTTATTGCAGCAGC+AGG 0.488835 tig0022022:-23702 Msa1396320:CDS
ACATCTATTACTGCAGCTCC+AGG 0.491120 tig0022022:+23138 None:intergenic
ACTCCTGTTCCTGGAGGTGT+AGG 0.496506 tig0022022:-23018 Msa1396320:CDS
TGTTATTGCAGCAGCAGGAC+AGG 0.498986 tig0022022:-23697 Msa1396320:CDS
CGTATTTCTCAGAGAGGATA+CGG 0.500459 tig0022022:+26703 None:intergenic
GTCACGTGGCGCAAATTAAG+TGG 0.508820 tig0022022:-22052 Msa1396320:three_prime_UTR
ATCGGCAAGCTTGCCATGAA+AGG 0.510148 tig0022022:-26206 Msa1396320:CDS
GGCTTTCATCCTTTGAACAT+CGG 0.514273 tig0022022:-26224 Msa1396320:CDS
TCATTTATATGTTTGGGCAG+TGG 0.514441 tig0022022:+26290 None:intergenic
TGTAAGTATAAAGGGGAAAA+GGG 0.521694 tig0022022:-23850 Msa1396320:intron
GACTGAAATCAGCCTTGAGA+AGG 0.525446 tig0022022:-26255 Msa1396320:CDS
GACTTGCAGTGGTGATAGTA+GGG 0.525562 tig0022022:-26573 Msa1396320:CDS
GGGAAAAGGGCAGTTGTGGT+TGG 0.536435 tig0022022:-23837 Msa1396320:CDS
TTGGTAGAAGCAACATAGTC+GGG 0.537576 tig0022022:-23818 Msa1396320:CDS
GCATTTACTTTGGGAGTGCA+GGG 0.540237 tig0022022:+26164 None:intergenic
AGCAGCAGGACAGGCAAAGA+TGG 0.543320 tig0022022:-23688 Msa1396320:intron
GGTGGCCATTTGATCGGAGA+AGG 0.543368 tig0022022:+26782 None:intergenic
GCAAGCTTGCCGATGTTCAA+AGG 0.547348 tig0022022:+26215 None:intergenic
CTTCGGAAATTTGTTCAGGA+AGG 0.547633 tig0022022:+26470 None:intergenic
AGATCGGATTGTTTGTGCCA+CGG 0.550515 tig0022022:+26743 None:intergenic
GATGACCCAACTAGGAAGGC+AGG 0.556133 tig0022022:-23099 Msa1396320:CDS
AAGCATCTAAAGTTGCTGGT+TGG 0.557994 tig0022022:-23044 Msa1396320:CDS
ATTCTGTTGATGACCCAACT+AGG 0.559417 tig0022022:-23107 Msa1396320:CDS
GTCATTGGACCTACACCTCC+AGG 0.563478 tig0022022:+23009 None:intergenic
AAGTGACTCACCATGTACAT+TGG 0.565737 tig0022022:+26408 None:intergenic
AAAGGGGAAAAGGGCAGTTG+TGG 0.567603 tig0022022:-23841 Msa1396320:intron
TCAGGTTGCTGGACTTGCAG+TGG 0.572590 tig0022022:-26584 Msa1396320:intron
CAAATGGCCACCGTAATTGA+CGG 0.574064 tig0022022:-26771 Msa1396320:CDS
GTTGGTAGAAGCAACATAGT+CGG 0.574369 tig0022022:-23819 Msa1396320:CDS
AGCCATCAACATCCTTCTCA+AGG 0.583414 tig0022022:+26243 None:intergenic
CCTCGTCGGCGATTTCAGAT+CGG 0.583482 tig0022022:+26727 None:intergenic
AAGGGAAGTTGGATAAAACC+TGG 0.587815 tig0022022:-23156 Msa1396320:CDS
TGCGCTAGTTAACTAGCGCA+TGG 0.589831 tig0022022:+22099 None:intergenic
TGTTGATGACCCAACTAGGA+AGG 0.598349 tig0022022:-23103 Msa1396320:CDS
GGAGTGCAGGGAACAAAGAG+AGG 0.599700 tig0022022:+26176 None:intergenic
CGTATTCTATAAAATTGTAA+GGG 0.603359 tig0022022:-22834 Msa1396320:three_prime_UTR
TTCTATAAAATTGTAAGGGT+AGG 0.607410 tig0022022:-22830 Msa1396320:three_prime_UTR
TAGCACATACAGAGAACAAG+AGG 0.609611 tig0022022:+22753 None:intergenic
GGCGCAAATTAAGTGGCGCA+AGG 0.612096 tig0022022:-22045 Msa1396320:three_prime_UTR
GGCTTTGCCGTCAATTACGG+TGG 0.613849 tig0022022:+26764 None:intergenic
AACGCTGATCCCAATGTACA+TGG 0.616668 tig0022022:-26418 Msa1396320:intron
TTTGTGAGAGTTAAATTGGG+TGG 0.624251 tig0022022:-26880 Msa1396320:five_prime_UTR
CGTAATTGACGGCAAAGCCG+TGG 0.631640 tig0022022:-26760 Msa1396320:CDS
CCGATCTGAAATCGCCGACG+AGG 0.637149 tig0022022:-26727 Msa1396320:CDS
TGGATTACTCCTGTTCCTGG+AGG 0.641207 tig0022022:-23024 Msa1396320:CDS
CCTTGCCGTATTTCTCAGAG+AGG 0.642605 tig0022022:+26697 None:intergenic
CCTCTCTGAGAAATACGGCA+AGG 0.642652 tig0022022:-26697 Msa1396320:intron
GCAAATTAAGTGGCGCAAGG+TGG 0.643864 tig0022022:-22042 Msa1396320:three_prime_UTR
GGAGCTGCAGTAATAGATGT+CGG 0.646250 tig0022022:-23135 Msa1396320:CDS
ACTTGTGTGTGAATGAGCAA+TGG 0.673957 tig0022022:+23752 None:intergenic
AGAGAGGATACGGACCTCGT+CGG 0.680772 tig0022022:+26713 None:intergenic
GAGTGCAGGGAACAAAGAGA+GGG 0.687238 tig0022022:+26177 None:intergenic
AGCACATACAGAGAACAAGA+GGG 0.699285 tig0022022:+22754 None:intergenic
AATGCGCAATTTAAGTCACG+TGG 0.705378 tig0022022:-22066 Msa1396320:three_prime_UTR
GCACATACAGAGAACAAGAG+GGG 0.710443 tig0022022:+22755 None:intergenic
TCTTAGCAGAAACTGAACTG+AGG 0.714720 tig0022022:+22865 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTATGACATTTTTTATA+GGG + tig0022022:22078-22097 None:intergenic 10.0%
!!! AATTAGTTTATAATTATGAA+TGG - tig0022022:23032-23051 Msa1396320:CDS 10.0%
!!! GTTTAATATTATATTTTCAT+AGG - tig0022022:25487-25506 Msa1396320:intron 10.0%
!!! TTCCTTTAATTTTAAATAAA+AGG - tig0022022:26067-26086 Msa1396320:intron 10.0%
!!! TCCTTTAATTTTAAATAAAA+GGG - tig0022022:26068-26087 Msa1396320:intron 10.0%
!!! GTAATTATGACATTTTTTAT+AGG + tig0022022:22079-22098 None:intergenic 15.0%
!!! TCTTTTTTACTGTATTTATT+TGG - tig0022022:22632-22651 Msa1396320:intron 15.0%
!! AAAAAATCAATTAAGATTAC+TGG - tig0022022:23085-23104 Msa1396320:CDS 15.0%
!! AAAAATCAATTAAGATTACT+GGG - tig0022022:23086-23105 Msa1396320:CDS 15.0%
!! TTAAATACACTATTTAAAGA+AGG + tig0022022:25064-25083 None:intergenic 15.0%
!!! TTTTTAAAAAAACATAGACT+TGG + tig0022022:25365-25384 None:intergenic 15.0%
!!! TTTTTGTCAATTTTCAAATT+TGG - tig0022022:25405-25424 Msa1396320:intron 15.0%
!!! TCCCTTTTATTTAAAATTAA+AGG + tig0022022:26072-26091 None:intergenic 15.0%
!!! ATTTTTTGTGAGAGTTAAAT+TGG - tig0022022:22103-22122 Msa1396320:three_prime_UTR 20.0%
!!! TTTTTTGTGAGAGTTAAATT+GGG - tig0022022:22104-22123 Msa1396320:three_prime_UTR 20.0%
!! TTCTCTTCATTTATATGTTT+GGG + tig0022022:22706-22725 None:intergenic 20.0%
!! TTTCTCTTCATTTATATGTT+TGG + tig0022022:22707-22726 None:intergenic 20.0%
!! ATTATGAATGGCATAAAAAA+TGG - tig0022022:23044-23063 Msa1396320:CDS 20.0%
!! AAAATCAATTAAGATTACTG+GGG - tig0022022:23087-23106 Msa1396320:CDS 20.0%
!! TAAAAAAATAAACATGTGAG+TGG + tig0022022:23330-23349 None:intergenic 20.0%
!!! TTTTGAACTACTTTCTTTAA+AGG - tig0022022:23803-23822 Msa1396320:CDS 20.0%
!!! TTTTAAGTGATTAAACTTTG+CGG - tig0022022:24959-24978 Msa1396320:intron 20.0%
!!! ACGCATAAATAGTTTTTAAA+TGG - tig0022022:25454-25473 Msa1396320:intron 20.0%
!!! AAATAGTTTTTAAATGGTAG+CGG - tig0022022:25460-25479 Msa1396320:intron 20.0%
!! AAATGAATGATATATAAGAG+TGG - tig0022022:25554-25573 Msa1396320:intron 20.0%
!!! AATTTTCTAAAACTGTGTTT+TGG + tig0022022:25721-25740 None:intergenic 20.0%
!!! ATTTACTTTTTCTTAGATCA+AGG - tig0022022:25812-25831 Msa1396320:intron 20.0%
!!! TTTACTTTTTCTTAGATCAA+GGG - tig0022022:25813-25832 Msa1396320:intron 20.0%
!! ACGTATTCTATAAAATTGTA+AGG - tig0022022:26152-26171 Msa1396320:intron 20.0%
!! CGTATTCTATAAAATTGTAA+GGG - tig0022022:26153-26172 Msa1396320:intron 20.0%
!!! TTCTTCTTTTTATAACAAAG+AGG + tig0022022:26389-26408 None:intergenic 20.0%
!!! TTCTTCTTTTTATAACAAAG+AGG + tig0022022:26389-26408 None:intergenic 20.0%
!!! TTCTTCTTTTTATAACAAAG+AGG + tig0022022:26389-26408 None:intergenic 20.0%
! TTCAACTCAATTCTATCAAT+AGG - tig0022022:22869-22888 Msa1396320:three_prime_UTR 25.0%
! TATCAATAGGAAAATAATCC+AGG - tig0022022:22882-22901 Msa1396320:three_prime_UTR 25.0%
!! TTTTGCTAGCTAAATTAGAA+CGG - tig0022022:23401-23420 Msa1396320:intron 25.0%
! TTAAGTGATTAAACTTTGCA+GGG + tig0022022:23907-23926 None:intergenic 25.0%
! TTTAAGTGATTAAACTTTGC+AGG + tig0022022:24960-24979 None:intergenic 25.0%
! ACAACATCAAAATCATATTC+CGG - tig0022022:24597-24616 Msa1396320:intron 25.0%
! TTTAAGTGATTAAACTTTGC+GGG - tig0022022:24960-24979 Msa1396320:intron 25.0%
!! TGTCAATTTTCAAATTTGGA+TGG - tig0022022:25409-25428 Msa1396320:intron 25.0%
! TTAGCTCAATATAATTGATG+TGG + tig0022022:25536-25555 None:intergenic 25.0%
! TTGAGAAGATTAATAACAGT+GGG + tig0022022:25779-25798 None:intergenic 25.0%
! ATTGAGAAGATTAATAACAG+TGG + tig0022022:25780-25799 None:intergenic 25.0%
! TTCTATAAAATTGTAAGGGT+AGG - tig0022022:26157-26176 Msa1396320:intron 25.0%
!! CTTTATTGGAATATTGCTTT+TGG - tig0022022:26259-26278 Msa1396320:CDS 25.0%
! AGAAGAAATAGGTTATATAC+AGG + tig0022022:26345-26364 None:intergenic 25.0%
! ATAAAGTATAGCACATACTT+GGG + tig0022022:26457-26476 None:intergenic 25.0%
! AATAAAGTATAGCACATACT+TGG + tig0022022:26458-26477 None:intergenic 25.0%
! AAGTATGTGCTATACTTTAT+TGG - tig0022022:26457-26476 Msa1396320:CDS 25.0%
!! CTTTATTGGAATATTGCTTT+TGG - tig0022022:26259-26278 Msa1396320:CDS 25.0%
! AGAAGAAATAGGTTATATAC+AGG + tig0022022:26345-26364 None:intergenic 25.0%
! ATAAAGTATAGCACATACTT+GGG + tig0022022:26457-26476 None:intergenic 25.0%
! AATAAAGTATAGCACATACT+TGG + tig0022022:26458-26477 None:intergenic 25.0%
! AAGTATGTGCTATACTTTAT+TGG - tig0022022:26457-26476 Msa1396320:CDS 25.0%
!! CTTTATTGGAATATTGCTTT+TGG - tig0022022:26259-26278 Msa1396320:CDS 25.0%
! AGAAGAAATAGGTTATATAC+AGG + tig0022022:26345-26364 None:intergenic 25.0%
AAGATGATGAAGGAATGATT+GGG + tig0022022:22323-22342 None:intergenic 30.0%
TTATATGTGTGCAGGTATAT+TGG - tig0022022:22666-22685 Msa1396320:three_prime_UTR 30.0%
!! GAATGAAGAGCATTTACTTT+GGG + tig0022022:22835-22854 None:intergenic 30.0%
!! AGAATGAAGAGCATTTACTT+TGG + tig0022022:22836-22855 None:intergenic 30.0%
! CTCTTCATTCTCAAATCTTT+TGG - tig0022022:22845-22864 Msa1396320:three_prime_UTR 30.0%
GCTCTGTTTGGTAAAAATAA+TGG - tig0022022:22904-22923 Msa1396320:three_prime_UTR 30.0%
!! AAGCTAACTATAGTTGATAG+CGG - tig0022022:22962-22981 Msa1396320:CDS 30.0%
CTGATTGAATTTGTAGTGTT+TGG - tig0022022:22994-23013 Msa1396320:CDS 30.0%
GTAGTGTTTGGTAAAATTAG+CGG - tig0022022:23006-23025 Msa1396320:CDS 30.0%
TAGTGTTTGGTAAAATTAGC+GGG - tig0022022:23007-23026 Msa1396320:CDS 30.0%
TGTCTTATAATCTCGTATGT+TGG + tig0022022:23256-23275 None:intergenic 30.0%
TAAGACATAAGCTATAAGCT+CGG - tig0022022:23269-23288 Msa1396320:intron 30.0%
TTTGCTAGCTAAATTAGAAC+GGG - tig0022022:23402-23421 Msa1396320:intron 30.0%
! TTAATGCACAGTTTTCATTG+AGG - tig0022022:23486-23505 Msa1396320:intron 30.0%
TAAGTGATTAAACTTTGCAG+GGG + tig0022022:23906-23925 None:intergenic 30.0%
!!! ATTTTGCTAATTTGATGACG+TGG + tig0022022:23960-23979 None:intergenic 30.0%
ACGTCATCAAATTAGCAAAA+TGG - tig0022022:23959-23978 Msa1396320:intron 30.0%
ATCAAATTAGCAAAATGGCA+TGG - tig0022022:23964-23983 Msa1396320:intron 30.0%
TCAAATTAGCAAAATGGCAT+GGG - tig0022022:23965-23984 Msa1396320:intron 30.0%
AGAAAAGAAAATGATAGCAG+GGG + tig0022022:24048-24067 None:intergenic 30.0%
GAGAAAAGAAAATGATAGCA+GGG + tig0022022:24049-24068 None:intergenic 30.0%
AGAGAAAAGAAAATGATAGC+AGG + tig0022022:24050-24069 None:intergenic 30.0%
TACTGTATTGTAGATTCAAG+AGG + tig0022022:24186-24205 None:intergenic 30.0%
TTCTTTGCAAGATGAATTAG+TGG - tig0022022:24258-24277 Msa1396320:intron 30.0%
AGGAAGAAAATTGAAGAACA+CGG - tig0022022:24334-24353 Msa1396320:intron 30.0%
! TCATTTTGCACAATCATCTT+CGG + tig0022022:24702-24721 None:intergenic 30.0%
AGATGATTGTGCAAAATGAA+TGG - tig0022022:24703-24722 Msa1396320:intron 30.0%
!! GTAAAACAGATTGATGATGA+TGG - tig0022022:24774-24793 Msa1396320:intron 30.0%
CCATGATTGAAGAATAAACA+TGG + tig0022022:24815-24834 None:intergenic 30.0%
CCATGTTTATTCTTCAATCA+TGG - tig0022022:24812-24831 Msa1396320:intron 30.0%
GAGAAAGAAGATGAAATCAA+GGG - tig0022022:24853-24872 Msa1396320:intron 30.0%
ATTTCACAGACAAACATGAA+AGG + tig0022022:24888-24907 None:intergenic 30.0%
TTAAGTGATTAAACTTTGCG+GGG - tig0022022:24961-24980 Msa1396320:intron 30.0%
! TACATATGCTACTTGTATTC+AGG - tig0022022:25086-25105 Msa1396320:intron 30.0%
TGTAAGTATAAAGGGGAAAA+GGG - tig0022022:25137-25156 Msa1396320:intron 30.0%
TTCAAAAGCAGTAATGAAAC+TGG + tig0022022:25198-25217 None:intergenic 30.0%
ACAAAAACTGCACATATACT+AGG + tig0022022:25392-25411 None:intergenic 30.0%
AAATTTGGATGGTTCTTTCT+TGG - tig0022022:25420-25439 Msa1396320:intron 30.0%
CAATATAATTGATGTGGAAC+TGG + tig0022022:25530-25549 None:intergenic 30.0%
!!! ACTCAAGTTTTAAACTTGAG+TGG - tig0022022:25587-25606 Msa1396320:intron 30.0%
AATATCATTGAGAGCAACAA+CGG + tig0022022:25656-25675 None:intergenic 30.0%
GATATTCCTATAAACGACAT+TGG - tig0022022:25670-25689 Msa1396320:intron 30.0%
! CATATACCAATGTCGTTTAT+AGG + tig0022022:25679-25698 None:intergenic 30.0%
AATGTTGCTGAAGAATACTT+TGG - tig0022022:26007-26026 Msa1396320:intron 30.0%
CTGTATGTGCTATACTTTAT+TGG - tig0022022:26245-26264 Msa1396320:CDS 30.0%
! TTTTATAACAAAGAGGTTGC+AGG + tig0022022:26382-26401 None:intergenic 30.0%
! TTTTATAACAAAGAGGTTGC+AGG + tig0022022:26382-26401 None:intergenic 30.0%
! TTTTATAACAAAGAGGTTGC+AGG + tig0022022:26382-26401 None:intergenic 30.0%
TTTGTGAGAGTTAAATTGGG+TGG - tig0022022:22107-22126 Msa1396320:three_prime_UTR 35.0%
GAAGATGATGAAGGAATGAT+TGG + tig0022022:22324-22343 None:intergenic 35.0%
TCATCATCATCATCATCTTC+AGG - tig0022022:22385-22404 Msa1396320:intron 35.0%
ATGCTTGATTACTTCAGCTT+CGG + tig0022022:22537-22556 None:intergenic 35.0%
!! GTTTGTTGTTATATGTGTGC+AGG - tig0022022:22658-22677 Msa1396320:three_prime_UTR 35.0%
TCATTTATATGTTTGGGCAG+TGG + tig0022022:22700-22719 None:intergenic 35.0%
AAAATAATCCAGGCTCTGTT+TGG - tig0022022:22892-22911 Msa1396320:three_prime_UTR 35.0%
!! TATTTTTACCAAACAGAGCC+TGG + tig0022022:22903-22922 None:intergenic 35.0%
!! GCTCACAAACTAGCTTATTT+TGG - tig0022022:22930-22949 Msa1396320:exon 35.0%
!!! CTAGCTTATTTTGGATGACT+TGG - tig0022022:22939-22958 Msa1396320:exon 35.0%
GAAAGTGACAATTACCAAAC+AGG - tig0022022:23219-23238 Msa1396320:intron 35.0%
TAGCTAAATTAGAACGGGAT+AGG - tig0022022:23407-23426 Msa1396320:intron 35.0%
GAAAACTGTGCATTAATGAC+AGG + tig0022022:23482-23501 None:intergenic 35.0%
TGTAATTGTGCGTTCTTGAT+CGG + tig0022022:23777-23796 None:intergenic 35.0%
! AAAAAGGATTAGCGATTGCA+GGG + tig0022022:24989-25008 None:intergenic 35.0%
! AAAAAAGGATTAGCGATTGC+AGG + tig0022022:24988-25007 None:intergenic 35.0%
ATACTTTGCTTAGTCAACGA+GGG + tig0022022:24005-24024 None:intergenic 35.0%
AAGAAGGAAGAAGAAGGTAA+TGG + tig0022022:24088-24107 None:intergenic 35.0%
AGAAGAAAGAAGGAAGAAGA+AGG + tig0022022:24094-24113 None:intergenic 35.0%
CAAAGAATCAAATCCACACT+TGG + tig0022022:24245-24264 None:intergenic 35.0%
TTGCAAGATGAATTAGTGGT+TGG - tig0022022:24262-24281 Msa1396320:intron 35.0%
TGCAAGATGAATTAGTGGTT+GGG - tig0022022:24263-24282 Msa1396320:intron 35.0%
!! TGGTTGGGTTTTGATGTTTT+GGG - tig0022022:24278-24297 Msa1396320:intron 35.0%
!!! CTTTCGATGATGTTGTTTTG+CGG + tig0022022:24626-24645 None:intergenic 35.0%
! TGAAATCGTGTTGCAGTTTT+CGG - tig0022022:24651-24670 Msa1396320:intron 35.0%
TGTGCAAAATGAATGGTGAA+TGG - tig0022022:24710-24729 Msa1396320:intron 35.0%
GTGCAAAATGAATGGTGAAT+GGG - tig0022022:24711-24730 Msa1396320:intron 35.0%
GGTGTAAAACAGATTGATGA+TGG - tig0022022:24750-24769 Msa1396320:intron 35.0%
GGAGAAAGAAGATGAAATCA+AGG - tig0022022:24852-24871 Msa1396320:intron 35.0%
!! CAGATGTTAATTTGATGACG+TGG - tig0022022:24908-24927 Msa1396320:intron 35.0%
TAAGTGATTAAACTTTGCGG+GGG - tig0022022:24962-24981 Msa1396320:intron 35.0%
! AAAAAAGGATTAGCGATTGC+AGG - tig0022022:24988-25007 Msa1396320:intron 35.0%
! AAAAAGGATTAGCGATTGCA+GGG - tig0022022:24989-25008 Msa1396320:intron 35.0%
! TTTTTCGTCCCTGTAAATAG+GGG + tig0022022:25031-25050 None:intergenic 35.0%
! GTTTTTCGTCCCTGTAAATA+GGG + tig0022022:25032-25051 None:intergenic 35.0%
! TGTTTTTCGTCCCTGTAAAT+AGG + tig0022022:25033-25052 None:intergenic 35.0%
ACGAAGTGGTGTAAGTATAA+AGG - tig0022022:25128-25147 Msa1396320:intron 35.0%
CGAAGTGGTGTAAGTATAAA+GGG - tig0022022:25129-25148 Msa1396320:intron 35.0%
GAAGTGGTGTAAGTATAAAG+GGG - tig0022022:25130-25149 Msa1396320:intron 35.0%
GTGTAAGTATAAAGGGGAAA+AGG - tig0022022:25136-25155 Msa1396320:intron 35.0%
TAAACTTGAGTGGAGATATG+CGG - tig0022022:25597-25616 Msa1396320:intron 35.0%
!!! TAACAGTGGGCTATATTTTC+TGG + tig0022022:25766-25785 None:intergenic 35.0%
TTTCTTAGATCAAGGGAAGT+TGG - tig0022022:25820-25839 Msa1396320:intron 35.0%
! TGTTGGAGATGTAGATTTTG+AGG - tig0022022:25920-25939 Msa1396320:intron 35.0%
AATTACGGTGGCCATTTGAT+CGG + tig0022022:22214-22233 None:intergenic 40.0%
CGTATTTCTCAGAGAGGATA+CGG + tig0022022:22287-22306 None:intergenic 40.0%
! CGTATCCTCTCTGAGAAATA+CGG - tig0022022:22285-22304 Msa1396320:intron 40.0%
AATCTCGCGAGAAATTGGAA+GGG + tig0022022:22364-22383 None:intergenic 40.0%
ATGAGAATCTCGCGAGAAAT+TGG + tig0022022:22369-22388 None:intergenic 40.0%
!! AGAAAAGCTTGCGCTGATTT+GGG - tig0022022:22473-22492 Msa1396320:intron 40.0%
! CTTCGGAAATTTGTTCAGGA+AGG + tig0022022:22520-22539 None:intergenic 40.0%
! TCAGCTTCGGAAATTTGTTC+AGG + tig0022022:22524-22543 None:intergenic 40.0%
AGTGACTCACCATGTACATT+GGG + tig0022022:22581-22600 None:intergenic 40.0%
AAGTGACTCACCATGTACAT+TGG + tig0022022:22582-22601 None:intergenic 40.0%
GGCTTTCATCCTTTGAACAT+CGG - tig0022022:22763-22782 Msa1396320:three_prime_UTR 40.0%
ATGTGAGTGGAATTCATCGA+GGG + tig0022022:23317-23336 None:intergenic 40.0%
AAATGACTCTTCGCATGAGT+AGG + tig0022022:23602-23621 None:intergenic 40.0%
TATTGTAACAACCTTCCCAC+AGG + tig0022022:23718-23737 None:intergenic 40.0%
! TGTTTTTCGTCCCTGCAAAT+AGG - tig0022022:23834-23853 Msa1396320:CDS 40.0%
! GTTTTTCGTCCCTGCAAATA+GGG - tig0022022:23835-23854 Msa1396320:CDS 40.0%
! TTTTTCGTCCCTGCAAATAG+GGG - tig0022022:23836-23855 Msa1396320:CDS 40.0%
CTTTGCAGGGGCAAAAAAAA+AGG + tig0022022:23894-23913 None:intergenic 40.0%
!! GCATTGATTAACTGGGTCAA+GGG + tig0022022:24930-24949 None:intergenic 40.0%
!! TGACGTGGCATTGATTAACT+GGG + tig0022022:24923-24942 None:intergenic 40.0%
!! ATGACGTGGCATTGATTAAC+TGG + tig0022022:24922-24941 None:intergenic 40.0%
TTAGCAAAATGGCATGGGAA+TGG - tig0022022:23970-23989 Msa1396320:intron 40.0%
CATACTTTGCTTAGTCAACG+AGG + tig0022022:24006-24025 None:intergenic 40.0%
! CTCGTTGACTAAGCAAAGTA+TGG - tig0022022:24004-24023 Msa1396320:intron 40.0%
! AAGGAAGAAGAAGGTAATGG+TGG + tig0022022:24085-24104 None:intergenic 40.0%
! ATTGCTGTTGCTATTGCTGT+TGG + tig0022022:24136-24155 None:intergenic 40.0%
!! CACTTGGTTTGTTAAGCTTC+TGG + tig0022022:24229-24248 None:intergenic 40.0%
GAAGCTTAACAAACCAAGTG+TGG - tig0022022:24229-24248 Msa1396320:intron 40.0%
!! GTGGTTGGGTTTTGATGTTT+TGG - tig0022022:24277-24296 Msa1396320:intron 40.0%
!!! GGTTTTGATGTTTTGGGACA+CGG - tig0022022:24284-24303 Msa1396320:intron 40.0%
AGAAGAGAAGAGGATGAAGA+AGG - tig0022022:24314-24333 Msa1396320:intron 40.0%
AAATTGAAGAACACGGTCAC+AGG - tig0022022:24341-24360 Msa1396320:intron 40.0%
!!! TGATGTTGTTTTGCGGTTAC+CGG + tig0022022:24619-24638 None:intergenic 40.0%
TGAATGGTGAATGGGATTGT+AGG - tig0022022:24719-24738 Msa1396320:intron 40.0%
ATGGGATTGTAGGACAATGA+AGG - tig0022022:24729-24748 Msa1396320:intron 40.0%
ATGGAACACGAGAAAGAAGA+GGG - tig0022022:24831-24850 Msa1396320:intron 40.0%
!! ATGACGTGGCATTGATTAAC+TGG - tig0022022:24922-24941 Msa1396320:intron 40.0%
!! TGACGTGGCATTGATTAACT+GGG - tig0022022:24923-24942 Msa1396320:intron 40.0%
!! GCATTGATTAACTGGGTCAA+GGG - tig0022022:24930-24949 Msa1396320:intron 40.0%
TTTAAGCGACCCCTATTTAC+AGG - tig0022022:25019-25038 Msa1396320:intron 40.0%
TTAAGCGACCCCTATTTACA+GGG - tig0022022:25020-25039 Msa1396320:intron 40.0%
CTTGAACTATTGTCACGAAG+TGG - tig0022022:25114-25133 Msa1396320:intron 40.0%
! GTTGGTAGAAGCAACATAGT+CGG - tig0022022:25168-25187 Msa1396320:intron 40.0%
TTGGTAGAAGCAACATAGTC+GGG - tig0022022:25169-25188 Msa1396320:intron 40.0%
!! GCTTTTGAAAGCAGATGCTA+CGG - tig0022022:25209-25228 Msa1396320:intron 40.0%
ACTTGTGTGTGAATGAGCAA+TGG + tig0022022:25238-25257 None:intergenic 40.0%
! GATATTGTTATTGCAGCAGC+AGG - tig0022022:25285-25304 Msa1396320:intron 40.0%
CATAGGAACCTAAGTGTTTG+TGG - tig0022022:25504-25523 Msa1396320:intron 40.0%
ATCAAGATTGTCAAGAGAGC+TGG + tig0022022:25626-25645 None:intergenic 40.0%
!!! GCTATATTTTCTGGAGTGTG+AGG + tig0022022:25757-25776 None:intergenic 40.0%
AAGGGAAGTTGGATAAAACC+TGG - tig0022022:25831-25850 Msa1396320:intron 40.0%
!! ATTCTGTTGATGACCCAACT+AGG - tig0022022:25880-25899 Msa1396320:intron 40.0%
TATAACCTGCCTTCCTAGTT+GGG + tig0022022:25896-25915 None:intergenic 40.0%
! AAGCATCTAAAGTTGCTGGT+TGG - tig0022022:25943-25962 Msa1396320:intron 40.0%
AGCAACATTGTGACTGTCAT+TGG + tig0022022:25996-26015 None:intergenic 40.0%
TCTTAGCAGAAACTGAACTG+AGG + tig0022022:26125-26144 None:intergenic 40.0%
AAAAAGATCAAGAGCAGGGA+AGG + tig0022022:26212-26231 None:intergenic 40.0%
AGCACATACAGAGAACAAGA+GGG + tig0022022:26236-26255 None:intergenic 40.0%
TAGCACATACAGAGAACAAG+AGG + tig0022022:26237-26256 None:intergenic 40.0%
TACAGAGGGGAAGAAGAAAT+AGG + tig0022022:26356-26375 None:intergenic 40.0%
TACAGAGGGGAAGAAGAAAT+AGG + tig0022022:26356-26375 None:intergenic 40.0%
TACAGAGGGGAAGAAGAAAT+AGG + tig0022022:26356-26375 None:intergenic 40.0%
! AACTAGCGCATGGACATTTT+GGG + tig0022022:26881-26900 None:intergenic 40.0%
! TAACTAGCGCATGGACATTT+TGG + tig0022022:26882-26901 None:intergenic 40.0%
AATGCGCAATTTAAGTCACG+TGG - tig0022022:26921-26940 Msa1396320:five_prime_UTR 40.0%
CAAATGGCCACCGTAATTGA+CGG - tig0022022:22216-22235 Msa1396320:intron 45.0%
AGATCGGATTGTTTGTGCCA+CGG + tig0022022:22247-22266 None:intergenic 45.0%
ATCGCGAGAGAAGATGATGA+AGG + tig0022022:22333-22352 None:intergenic 45.0%
ATCTCGCGAGAAATTGGAAG+GGG + tig0022022:22363-22382 None:intergenic 45.0%
GAATCTCGCGAGAAATTGGA+AGG + tig0022022:22365-22384 None:intergenic 45.0%
!! CATCATCATCTTCAGGTTGC+TGG - tig0022022:22392-22411 Msa1396320:intron 45.0%
GACTTGCAGTGGTGATAGTA+GGG - tig0022022:22414-22433 Msa1396320:intron 45.0%
!! GAGAAAAGCTTGCGCTGATT+TGG - tig0022022:22472-22491 Msa1396320:intron 45.0%
AACGCTGATCCCAATGTACA+TGG - tig0022022:22569-22588 Msa1396320:intron 45.0%
GACTGAAATCAGCCTTGAGA+AGG - tig0022022:22732-22751 Msa1396320:three_prime_UTR 45.0%
AGCCTTGAGAAGGATGTTGA+TGG - tig0022022:22742-22761 Msa1396320:three_prime_UTR 45.0%
AGCCATCAACATCCTTCTCA+AGG + tig0022022:22747-22766 None:intergenic 45.0%
! GCATTTACTTTGGGAGTGCA+GGG + tig0022022:22826-22845 None:intergenic 45.0%
! AGCATTTACTTTGGGAGTGC+AGG + tig0022022:22827-22846 None:intergenic 45.0%
TGGTTGAGATCGAACCTGTT+TGG + tig0022022:23236-23255 None:intergenic 45.0%
GAATTCATCGAGGGTCTGTT+TGG + tig0022022:23308-23327 None:intergenic 45.0%
CATGTGAGTGGAATTCATCG+AGG + tig0022022:23318-23337 None:intergenic 45.0%
!! AACCTTCCCACAGGTTTTAG+GGG + tig0022022:23709-23728 None:intergenic 45.0%
! CAACCTTCCCACAGGTTTTA+GGG + tig0022022:23710-23729 None:intergenic 45.0%
! ACAACCTTCCCACAGGTTTT+AGG + tig0022022:23711-23730 None:intergenic 45.0%
TTAAGCGACCCCTATTTGCA+GGG + tig0022022:23847-23866 None:intergenic 45.0%
TTTAAGCGACCCCTATTTGC+AGG + tig0022022:23848-23867 None:intergenic 45.0%
!! GGCATTGATTAACTGGGTCA+AGG + tig0022022:24929-24948 None:intergenic 45.0%
! GAAGAAGAAGGTAATGGTGG+AGG + tig0022022:24082-24101 None:intergenic 45.0%
! TGTTGCTATTGCTGTTGGTG+GGG + tig0022022:24131-24150 None:intergenic 45.0%
! CTGTTGCTATTGCTGTTGGT+GGG + tig0022022:24132-24151 None:intergenic 45.0%
! TGTGACTGTGTTGACATTGC+CGG + tig0022022:24532-24551 None:intergenic 45.0%
TTAGTGTTGTGACTGTGTCG+TGG + tig0022022:24565-24584 None:intergenic 45.0%
!!! GAAGCTGCTTTTTCCGTCAT+CGG + tig0022022:24680-24699 None:intergenic 45.0%
CATGGAACACGAGAAAGAAG+AGG - tig0022022:24830-24849 Msa1396320:intron 45.0%
!! GGCATTGATTAACTGGGTCA+AGG - tig0022022:24929-24948 Msa1396320:intron 45.0%
ACTTTGCGGGGGCAAAAAAA+AGG - tig0022022:24973-24992 Msa1396320:intron 45.0%
GCTTCACGTATGATGTCTTC+TGG + tig0022022:25264-25283 None:intergenic 45.0%
ACATCTATTACTGCAGCTCC+AGG + tig0022022:25852-25871 None:intergenic 45.0%
GGAGCTGCAGTAATAGATGT+CGG - tig0022022:25852-25871 Msa1396320:intron 45.0%
!! TGTTGATGACCCAACTAGGA+AGG - tig0022022:25884-25903 Msa1396320:intron 45.0%
CTATAACCTGCCTTCCTAGT+TGG + tig0022022:25897-25916 None:intergenic 45.0%
CAACTAGGAAGGCAGGTTAT+AGG - tig0022022:25895-25914 Msa1396320:intron 45.0%
AAGGCAGGTTATAGGCTTGT+TGG - tig0022022:25903-25922 Msa1396320:intron 45.0%
!! GAGGAAGCATCTAAAGTTGC+TGG - tig0022022:25939-25958 Msa1396320:intron 45.0%
GGGGAAAAAGATCAAGAGCA+GGG + tig0022022:26216-26235 None:intergenic 45.0%
AGGGGAAAAAGATCAAGAGC+AGG + tig0022022:26217-26236 None:intergenic 45.0%
GCACATACAGAGAACAAGAG+GGG + tig0022022:26235-26254 None:intergenic 45.0%
GTATAGCACATACTTGGGCA+TGG + tig0022022:26452-26471 None:intergenic 45.0%
GTATAGCACATACTTGGGCA+TGG + tig0022022:26452-26471 None:intergenic 45.0%
!!! TGTTTATTTTTTTATAATAT+AGG - tig0022022:23336-23355 Msa1396320:intron 5.0%
!!! GTTTATTTTTTTATAATATA+GGG - tig0022022:23337-23356 Msa1396320:intron 5.0%
CGCAACCTTCTCCGATCAAA+TGG - tig0022022:22200-22219 Msa1396320:intron 50.0%
CACGGCTTTGCCGTCAATTA+CGG + tig0022022:22229-22248 None:intergenic 50.0%
CCTTGCCGTATTTCTCAGAG+AGG + tig0022022:22293-22312 None:intergenic 50.0%
! CCTCTCTGAGAAATACGGCA+AGG - tig0022022:22290-22309 Msa1396320:intron 50.0%
TCTCGCGAGAAATTGGAAGG+GGG + tig0022022:22362-22381 None:intergenic 50.0%
GGACTTGCAGTGGTGATAGT+AGG - tig0022022:22413-22432 Msa1396320:intron 50.0%
GCAAGCTTGCCGATGTTCAA+AGG + tig0022022:22775-22794 None:intergenic 50.0%
ATCGGCAAGCTTGCCATGAA+AGG - tig0022022:22781-22800 Msa1396320:three_prime_UTR 50.0%
GAGTGCAGGGAACAAAGAGA+GGG + tig0022022:22813-22832 None:intergenic 50.0%
CATCGAGGGTCTGTTTGGTA+AGG + tig0022022:23303-23322 None:intergenic 50.0%
TGTGATCCCCCTAAAACCTG+TGG - tig0022022:23699-23718 Msa1396320:CDS 50.0%
GTGATCCCCCTAAAACCTGT+GGG - tig0022022:23700-23719 Msa1396320:CDS 50.0%
!!! ACCTTCCCACAGGTTTTAGG+GGG + tig0022022:23708-23727 None:intergenic 50.0%
TGTGCGTTCTTGATCGGCAT+GGG + tig0022022:23771-23790 None:intergenic 50.0%
TTGTGCGTTCTTGATCGGCA+TGG + tig0022022:23772-23791 None:intergenic 50.0%
! GTGGTGGGAGAGAAGAAAGA+AGG + tig0022022:24104-24123 None:intergenic 50.0%
! TTGCTATTGCTGTTGGTGGG+GGG + tig0022022:24129-24148 None:intergenic 50.0%
! GTTGCTATTGCTGTTGGTGG+GGG + tig0022022:24130-24149 None:intergenic 50.0%
! GCTGTTGCTATTGCTGTTGG+TGG + tig0022022:24133-24152 None:intergenic 50.0%
CGGTTGCAGAAGAAGAGAAG+AGG - tig0022022:24304-24323 Msa1396320:intron 50.0%
TGCCTGTCCTGAACAATCTG+AGG - tig0022022:24463-24482 Msa1396320:intron 50.0%
CTGTCCTGAACAATCTGAGG+CGG - tig0022022:24466-24485 Msa1396320:intron 50.0%
ACATTGCCGGCGTTTAAGAG+CGG + tig0022022:24519-24538 None:intergenic 50.0%
AAAGGGGAAAAGGGCAGTTG+TGG - tig0022022:25146-25165 Msa1396320:intron 50.0%
TGTTATTGCAGCAGCAGGAC+AGG - tig0022022:25290-25309 Msa1396320:intron 50.0%
GGAACTGGCCACAAACACTT+AGG + tig0022022:25515-25534 None:intergenic 50.0%
GGTTGGATTACTCCTGTTCC+TGG - tig0022022:25960-25979 Msa1396320:intron 50.0%
TGGATTACTCCTGTTCCTGG+AGG - tig0022022:25963-25982 Msa1396320:intron 50.0%
AGGTTGCAGGCATTACAGAG+GGG + tig0022022:26369-26388 None:intergenic 50.0%
GAGGTTGCAGGCATTACAGA+GGG + tig0022022:26370-26389 None:intergenic 50.0%
AGAGGTTGCAGGCATTACAG+AGG + tig0022022:26371-26390 None:intergenic 50.0%
AGGTTGCAGGCATTACAGAG+GGG + tig0022022:26369-26388 None:intergenic 50.0%
GAGGTTGCAGGCATTACAGA+GGG + tig0022022:26370-26389 None:intergenic 50.0%
AGAGGTTGCAGGCATTACAG+AGG + tig0022022:26371-26390 None:intergenic 50.0%
AGGTTGCAGGCATTACAGAG+GGG + tig0022022:26369-26388 None:intergenic 50.0%
GAGGTTGCAGGCATTACAGA+GGG + tig0022022:26370-26389 None:intergenic 50.0%
AGAGGTTGCAGGCATTACAG+AGG + tig0022022:26371-26390 None:intergenic 50.0%
! ACATTTTGGGCATGGCTGCA+GGG + tig0022022:26868-26887 None:intergenic 50.0%
TGCGCTAGTTAACTAGCGCA+TGG + tig0022022:26891-26910 None:intergenic 50.0%
GTCACGTGGCGCAAATTAAG+TGG - tig0022022:26935-26954 Msa1396320:five_prime_UTR 50.0%
GCAAATTAAGTGGCGCAAGG+TGG - tig0022022:26945-26964 Msa1396320:five_prime_UTR 50.0%
GGTGGCCATTTGATCGGAGA+AGG + tig0022022:22208-22227 None:intergenic 55.0%
GGCTTTGCCGTCAATTACGG+TGG + tig0022022:22226-22245 None:intergenic 55.0%
CGTAATTGACGGCAAAGCCG+TGG - tig0022022:22227-22246 Msa1396320:intron 55.0%
CCTCGTCGGCGATTTCAGAT+CGG + tig0022022:22263-22282 None:intergenic 55.0%
AGAGAGGATACGGACCTCGT+CGG + tig0022022:22277-22296 None:intergenic 55.0%
CTCGCGAGAAATTGGAAGGG+GGG + tig0022022:22361-22380 None:intergenic 55.0%
! TCAGGTTGCTGGACTTGCAG+TGG - tig0022022:22403-22422 Msa1396320:intron 55.0%
GAGAGGGTCTCTGCCTTTCA+TGG + tig0022022:22797-22816 None:intergenic 55.0%
GGAGTGCAGGGAACAAAGAG+AGG + tig0022022:22814-22833 None:intergenic 55.0%
TCCCCCTAAAACCTGTGGGA+AGG - tig0022022:23704-23723 Msa1396320:CDS 55.0%
! CGAAGGCATGGTTGAGGTGA+CGG + tig0022022:24424-24443 None:intergenic 55.0%
GGCAAGTGAGACAAGGCACA+CGG + tig0022022:24447-24466 None:intergenic 55.0%
CAGGACAGGCAAGTGAGACA+AGG + tig0022022:24454-24473 None:intergenic 55.0%
CGCCTCAGATTGTTCAGGAC+AGG + tig0022022:24468-24487 None:intergenic 55.0%
CGTACCGCCTCAGATTGTTC+AGG + tig0022022:24473-24492 None:intergenic 55.0%
! CAGTTTTCGGCGACCGATGA+CGG - tig0022022:24664-24683 Msa1396320:intron 55.0%
GGGAAAAGGGCAGTTGTGGT+TGG - tig0022022:25150-25169 Msa1396320:intron 55.0%
AGCAGCAGGACAGGCAAAGA+TGG - tig0022022:25299-25318 Msa1396320:intron 55.0%
GATGACCCAACTAGGAAGGC+AGG - tig0022022:25888-25907 Msa1396320:intron 55.0%
! ACTCCTGTTCCTGGAGGTGT+AGG - tig0022022:25969-25988 Msa1396320:intron 55.0%
GTCATTGGACCTACACCTCC+AGG + tig0022022:25981-26000 None:intergenic 55.0%
! GTGCGAGTGTTTTGTGCTGC+GGG + tig0022022:26422-26441 None:intergenic 55.0%
! GGTGCGAGTGTTTTGTGCTG+CGG + tig0022022:26423-26442 None:intergenic 55.0%
CATACTTGGGCATGGCTGCA+GGG + tig0022022:26444-26463 None:intergenic 55.0%
ACATACTTGGGCATGGCTGC+AGG + tig0022022:26445-26464 None:intergenic 55.0%
! GTGCGAGTGTTTTGTGCTGC+GGG + tig0022022:26422-26441 None:intergenic 55.0%
! GGTGCGAGTGTTTTGTGCTG+CGG + tig0022022:26423-26442 None:intergenic 55.0%
CATACTTGGGCATGGCTGCA+GGG + tig0022022:26444-26463 None:intergenic 55.0%
ACATACTTGGGCATGGCTGC+AGG + tig0022022:26445-26464 None:intergenic 55.0%
! GTGCGAGTGTTTTGTGCTGC+GGG + tig0022022:26422-26441 None:intergenic 55.0%
! GGTGCGAGTGTTTTGTGCTG+CGG + tig0022022:26423-26442 None:intergenic 55.0%
! GACATTTTGGGCATGGCTGC+AGG + tig0022022:26869-26888 None:intergenic 55.0%
! GCGCATGGACATTTTGGGCA+TGG + tig0022022:26876-26895 None:intergenic 55.0%
GGCGCAAATTAAGTGGCGCA+AGG - tig0022022:26942-26961 Msa1396320:five_prime_UTR 55.0%
! CCGATCTGAAATCGCCGACG+AGG - tig0022022:22260-22279 Msa1396320:intron 60.0%
! CTATTGCTGTTGGTGGGGGG+CGG + tig0022022:24126-24145 None:intergenic 60.0%
TTACGACCGAGACCTGGCGA+CGG + tig0022022:24392-24411 None:intergenic 60.0%
! ATGGTTGAGGTGACGGCAGG+CGG + tig0022022:24417-24436 None:intergenic 60.0%
! ACACGGCGAAGGCATGGTTG+AGG + tig0022022:24430-24449 None:intergenic 60.0%
TGAGACAAGGCACACGGCGA+AGG + tig0022022:24441-24460 None:intergenic 60.0%
!! TTTAAGAGCGGTACCGGCGC+TGG + tig0022022:24507-24526 None:intergenic 60.0%
CCGGCGTTTAAGAGCGGTAC+CGG + tig0022022:24513-24532 None:intergenic 60.0%
CCGGTACCGCTCTTAAACGC+CGG - tig0022022:24510-24529 Msa1396320:intron 60.0%
GGACCTACACCTCCAGGAAC+AGG + tig0022022:25975-25994 None:intergenic 60.0%
! GATAGAGTGCCACCGTCGCC+AGG - tig0022022:24377-24396 Msa1396320:intron 65.0%
GCGGAGTTACGACCGAGACC+TGG + tig0022022:24398-24417 None:intergenic 65.0%
! GGCATGGTTGAGGTGACGGC+AGG + tig0022022:24420-24439 None:intergenic 65.0%
CAAGGCACACGGCGAAGGCA+TGG + tig0022022:24436-24455 None:intergenic 65.0%
! TGTTGGTGGGGGGCGGTGGT+GGG + tig0022022:24119-24138 None:intergenic 70.0%
! TTGCTGTTGGTGGGGGGCGG+TGG + tig0022022:24123-24142 None:intergenic 70.0%
GTGCCACCGTCGCCAGGTCT+CGG - tig0022022:24383-24402 Msa1396320:intron 70.0%
CGCAACCTCTGCTCCAGCGC+CGG - tig0022022:24491-24510 Msa1396320:intron 70.0%
! CTGTTGGTGGGGGGCGGTGG+TGG + tig0022022:24120-24139 None:intergenic 75.0%
CGACCGAGACCTGGCGACGG+TGG + tig0022022:24389-24408 None:intergenic 75.0%
!! CGGTACCGGCGCTGGAGCAG+AGG + tig0022022:24499-24518 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0022022 gene 22041 26968 22041 ID=Msa1396320;Name=Msa1396320
tig0022022 mRNA 22041 26968 22041 ID=Msa1396320-mRNA-1;Parent=Msa1396320;Name=Msa1396320-mRNA-1;_AED=0.13;_eAED=0.13;_QI=178|0.8|0.83|1|0.6|0.66|6|480|280
tig0022022 exon 22041 22212 22041 ID=Msa1396320-mRNA-1:exon:15518;Parent=Msa1396320-mRNA-1
tig0022022 exon 22637 23181 22637 ID=Msa1396320-mRNA-1:exon:15517;Parent=Msa1396320-mRNA-1
tig0022022 exon 23689 23859 23689 ID=Msa1396320-mRNA-1:exon:15516;Parent=Msa1396320-mRNA-1
tig0022022 exon 26172 26329 26172 ID=Msa1396320-mRNA-1:exon:15515;Parent=Msa1396320-mRNA-1
tig0022022 exon 26419 26602 26419 ID=Msa1396320-mRNA-1:exon:15514;Parent=Msa1396320-mRNA-1
tig0022022 exon 26698 26968 26698 ID=Msa1396320-mRNA-1:exon:15513;Parent=Msa1396320-mRNA-1
tig0022022 five_prime_UTR 26791 26968 26791 ID=Msa1396320-mRNA-1:five_prime_utr;Parent=Msa1396320-mRNA-1
tig0022022 CDS 26698 26790 26698 ID=Msa1396320-mRNA-1:cds;Parent=Msa1396320-mRNA-1
tig0022022 CDS 26419 26602 26419 ID=Msa1396320-mRNA-1:cds;Parent=Msa1396320-mRNA-1
tig0022022 CDS 26172 26329 26172 ID=Msa1396320-mRNA-1:cds;Parent=Msa1396320-mRNA-1
tig0022022 CDS 23689 23859 23689 ID=Msa1396320-mRNA-1:cds;Parent=Msa1396320-mRNA-1
tig0022022 CDS 22945 23181 22945 ID=Msa1396320-mRNA-1:cds;Parent=Msa1396320-mRNA-1
tig0022022 three_prime_UTR 22637 22944 22637 ID=Msa1396320-mRNA-1:three_prime_utr;Parent=Msa1396320-mRNA-1
tig0022022 three_prime_UTR 22041 22212 22041 ID=Msa1396320-mRNA-1:three_prime_utr;Parent=Msa1396320-mRNA-1
Gene Sequence

>Msa1396320

ATGGCCACCGTAATTGACGGCAAAGCCGTGGCACAAACAATCCGATCTGAAATCGCCGACGAGGTCCGTATCCTCTCTGAGAAATACGGCAAGGTTGCTGGACTTGCAGTGGTGATAGTAGGGAACAGACAAGATTCAGAAAGCTATGTAAGAACGAAGAGAAAAGCTTGCGCTGATTTGGGAATCAAAAACTTCGACATTGACCTTCCTGAACAAATTTCCGAAGCTGAAGTAATCAAGCATGTTCATCAATTGAACGCTGATCCCAATGTACATGGTATATTGGTTCAACTTCCACTGCCCAAACATATAAATGAAGAGAAAGTTTTGACTGAAATCAGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATCGGCAAGCTTGCCATGAAAGGCAGAGACCCTCTCTTTGTTCCCTGCACTCCCAAAGGGAAAAGGGCAGTTGTGGTTGGTAGAAGCAACATAGTCGGGTTACCAGTTTCATTACTGCTTTTGAAAGCAGATGCTACGGTTACCATTGCTCATTCACACACAAGTCAACCAGAAGACATCATACGTGAAGCAGATATTGTTATTGCAGCAGCAGGACAGGCAAAGATGATCAAGGGAAGTTGGATAAAACCTGGAGCTGCAGTAATAGATGTCGGCATGAATTCTGTTGATGACCCAACTAGGAAGGCAGGTTATAGGCTTGTTGGAGATGTAGATTTTGAGGAAGCATCTAAAGTTGCTGGTTGGATTACTCCTGTTCCTGGAGGTGTAGGTCCAATGACAGTCACAATGTTGCTGAAGAATACTTTGGAGAGTGCTAAGCGCAGCATTGAGCAGAATAACTGA

Protein sequence

>Msa1396320

MATVIDGKAVAQTIRSEIADEVRILSEKYGKVAGLAVVIVGNRQDSESYVRTKRKACADLGIKNFDIDLPEQISEAEVIKHVHQLNADPNVHGILVQLPLPKHINEEKVLTEISLEKDVDGFHPLNIGKLAMKGRDPLFVPCTPKGKRAVVVGRSNIVGLPVSLLLLKADATVTIAHSHTSQPEDIIREADIVIAAAGQAKMIKGSWIKPGAAVIDVGMNSVDDPTRKAGYRLVGDVDFEEASKVAGWITPVPGGVGPMTVTMLLKNTLESAKRSIEQNN*