AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0212290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212290 MtrunA17_Chr2g0309511 85.201 473 19 4 1 422 1 473 0.0 812
Msa0212290 MtrunA17_Chr2g0309521 78.436 473 51 4 1 422 1 473 0.0 751
Msa0212290 MtrunA17_Chr2g0309541 75.262 477 56 7 1 421 1 471 0.0 703
Msa0212290 MtrunA17_Chr2g0318911 71.158 475 81 6 1 421 1 473 0.0 674
Msa0212290 MtrunA17_Chr1g0199991 50.116 431 162 6 34 412 28 457 2.06e-150 434
Msa0212290 MtrunA17_Chr1g0199971 46.827 457 186 8 9 412 5 457 1.81e-139 406
Msa0212290 MtrunA17_Chr7g0219051 43.750 464 191 11 11 413 12 466 7.67e-132 387
Msa0212290 MtrunA17_Chr4g0038311 42.333 463 194 15 12 411 11 463 5.56e-117 349
Msa0212290 MtrunA17_Chr3g0118851 43.119 436 183 12 34 415 69 493 3.94e-114 343
Msa0212290 MtrunA17_Chr3g0118841 42.130 432 185 11 34 411 70 490 8.42e-113 340
Msa0212290 MtrunA17_Chr3g0118881 40.498 442 189 12 34 412 69 499 2.56e-108 328
Msa0212290 MtrunA17_Chr4g0068841 40.000 475 212 12 8 412 7 478 5.74e-108 327
Msa0212290 MtrunA17_Chr3g0090331 39.551 445 203 12 27 414 58 493 2.33e-107 326
Msa0212290 MtrunA17_Chr4g0020241 41.763 431 188 13 34 412 69 488 1.53e-103 316
Msa0212290 MtrunA17_Chr1g0153881 41.299 431 184 12 35 413 86 499 1.89e-103 316
Msa0212290 MtrunA17_Chr2g0281621 37.924 472 220 12 7 412 2 466 3.74e-101 309
Msa0212290 MtrunA17_Chr3g0118831 40.000 430 163 12 35 412 74 460 4.00e-97 298
Msa0212290 MtrunA17_Chr4g0047861 37.385 436 205 11 43 414 57 488 4.98e-97 299
Msa0212290 MtrunA17_Chr3g0118861 38.739 444 168 12 34 415 71 472 4.34e-93 288
Msa0212290 MtrunA17_Chr3g0118891 38.022 455 181 13 14 415 55 461 7.03e-92 285
Msa0212290 MtrunA17_Chr2g0281641 39.481 385 173 7 89 414 7 390 9.41e-92 282
Msa0212290 MtrunA17_Chr1g0153941 37.582 455 198 11 34 414 73 515 9.49e-91 283
Msa0212290 MtrunA17_Chr4g0068861 37.349 415 200 10 9 370 60 467 5.02e-85 268
Msa0212290 MtrunA17_Chr3g0126031 34.732 429 220 9 41 411 30 456 2.52e-81 258
Msa0212290 MtrunA17_Chr3g0094811 35.586 444 207 15 35 413 27 456 3.81e-80 254
Msa0212290 MtrunA17_Chr5g0431301 34.873 433 218 10 41 411 31 461 5.25e-78 249
Msa0212290 MtrunA17_Chr3g0126051 33.030 439 231 11 41 418 35 471 1.74e-77 248
Msa0212290 MtrunA17_Chr8g0385871 34.177 474 230 18 6 411 3 462 8.31e-77 246
Msa0212290 MtrunA17_Chr3g0131731 34.322 472 233 16 10 413 1 463 4.87e-76 244
Msa0212290 MtrunA17_Chr2g0304931 33.710 442 218 11 34 412 34 463 5.41e-76 244
Msa0212290 MtrunA17_Chr7g0221551 33.257 436 212 14 43 411 34 457 4.59e-70 228
Msa0212290 MtrunA17_Chr8g0338461 29.854 479 230 15 32 410 23 495 2.81e-56 193
Msa0212290 MtrunA17_Chr7g0249431 29.314 481 228 16 36 410 24 498 1.07e-52 183
Msa0212290 MtrunA17_Chr1g0204191 31.796 412 237 16 35 411 88 490 3.57e-50 177
Msa0212290 MtrunA17_Chr7g0234051 28.243 478 238 16 30 407 20 492 1.29e-46 167
Msa0212290 MtrunA17_Chr1g0153921 39.485 233 110 7 199 414 1 219 1.77e-45 157
Msa0212290 MtrunA17_Chr1g0165811 37.190 242 103 7 35 236 27 259 1.07e-44 156
Msa0212290 MtrunA17_Chr1g0153931 43.646 181 64 4 42 185 78 257 2.69e-41 147
Msa0212290 MtrunA17_Chr7g0234041 28.744 414 198 16 43 370 30 432 2.19e-37 141
Msa0212290 MtrunA17_Chr2g0285351 25.974 462 265 15 17 410 17 469 2.80e-32 127
Msa0212290 MtrunA17_Chr2g0285371 26.267 434 239 16 48 410 46 469 7.50e-32 126
Msa0212290 MtrunA17_Chr4g0028241 25.328 458 243 13 21 407 60 489 2.09e-31 125
Msa0212290 MtrunA17_Chr2g0285381 26.005 423 237 14 48 405 49 460 1.05e-30 122
Msa0212290 MtrunA17_Chr4g0009681 27.500 400 217 16 65 400 67 457 5.37e-30 120
Msa0212290 MtrunA17_Chr4g0009641 27.720 386 230 14 60 405 65 441 1.49e-29 119
Msa0212290 MtrunA17_Chr4g0009701 26.536 407 222 16 65 405 70 465 1.91e-29 119
Msa0212290 MtrunA17_Chr4g0009661 27.318 399 207 16 65 394 70 454 3.74e-29 118
Msa0212290 MtrunA17_Chr4g0009671 25.962 416 223 13 60 405 30 430 5.61e-29 117
Msa0212290 MtrunA17_Chr3g0133011 25.934 482 262 16 6 405 23 491 1.77e-28 117
Msa0212290 MtrunA17_Chr4g0028271 27.451 408 227 13 54 407 101 493 7.71e-28 115
Msa0212290 MtrunA17_Chr4g0009651 25.366 410 223 15 65 405 70 465 1.30e-27 114
Msa0212290 MtrunA17_Chr4g0028261 28.010 407 227 15 54 407 122 515 3.98e-26 110
Msa0212290 MtrunA17_Chr2g0327401 25.420 417 235 15 54 412 104 502 4.10e-26 110
Msa0212290 MtrunA17_Chr1g0171411 26.764 411 229 15 54 408 87 481 1.17e-25 108
Msa0212290 MtrunA17_Chr1g0199171 25.714 420 221 16 54 408 94 487 3.47e-25 107
Msa0212290 MtrunA17_Chr4g0028281 25.122 410 234 15 54 407 99 491 8.57e-25 106
Msa0212290 MtrunA17_Chr4g0009721 26.190 378 223 15 60 405 61 414 2.73e-23 101
Msa0212290 MtrunA17_Chr2g0327381 22.819 447 244 14 54 407 98 536 3.08e-23 102
Msa0212290 MtrunA17_Chr3g0093971 24.065 428 246 14 43 402 30 446 3.63e-23 101
Msa0212290 MtrunA17_Chr1g0165821 34.641 153 80 4 276 411 29 178 2.12e-22 94.0
Msa0212290 MtrunA17_Chr2g0327371 29.756 205 114 7 55 235 87 285 7.85e-21 94.7
Msa0212290 MtrunA17_Chr7g0229651 27.225 191 123 5 185 362 1 188 2.39e-20 88.6
Msa0212290 MtrunA17_Chr7g0229631 43.434 99 48 5 36 131 31 124 1.38e-16 76.6
Msa0212290 MtrunA17_Chr7g0229611 48.529 68 30 3 42 106 28 93 8.65e-14 67.0
Msa0212290 MtrunA17_Chr7g0229641 52.083 48 23 0 135 182 45 92 2.04e-13 65.9
Msa0212290 MtrunA17_Chr7g0229621 45.946 74 34 4 36 106 23 93 3.76e-12 62.8
Msa0212290 MtrunA17_Chr4g0068851 60.870 46 18 0 367 412 16 61 4.05e-12 61.2
Msa0212290 MtrunA17_Chr2g0295271 86.667 30 4 0 156 185 19 48 6.40e-12 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212290 AT4G30810.1 56.703 455 134 8 14 414 20 465 4.21e-177 503
Msa0212290 AT2G35780.1 48.758 443 162 9 26 411 17 451 2.14e-142 414
Msa0212290 AT3G07990.1 48.028 431 171 6 33 411 28 457 2.67e-139 406
Msa0212290 AT4G30610.1 46.469 439 172 9 33 411 27 462 6.79e-131 385
Msa0212290 AT3G02110.1 42.217 469 200 10 9 411 8 471 6.76e-127 375
Msa0212290 AT2G24000.1 46.241 439 172 10 33 410 25 460 7.73e-125 370
Msa0212290 AT2G24010.1 46.774 434 169 11 33 411 25 451 4.14e-124 367
Msa0212290 AT2G24010.2 44.989 449 170 12 33 411 25 466 8.06e-119 354
Msa0212290 AT2G24010.3 42.581 465 166 12 42 411 4 462 7.53e-112 337
Msa0212290 AT5G23210.1 41.026 468 195 12 22 413 35 497 3.86e-110 333
Msa0212290 AT2G24000.2 44.717 407 162 10 33 410 25 397 1.45e-107 323
Msa0212290 AT2G35770.1 42.045 440 191 11 29 412 28 459 1.46e-107 325
Msa0212290 AT1G61130.1 38.377 456 216 12 16 411 10 460 7.11e-102 311
Msa0212290 AT3G63470.1 40.189 423 189 11 43 411 85 497 9.96e-101 309
Msa0212290 AT1G11080.1 38.004 471 218 12 12 411 22 489 2.88e-99 305
Msa0212290 AT1G11080.2 38.004 471 218 12 12 411 22 489 4.34e-99 305
Msa0212290 AT4G15100.1 38.731 457 204 13 31 417 37 487 1.89e-98 303
Msa0212290 AT5G08260.1 37.389 452 202 12 34 412 34 477 1.19e-96 298
Msa0212290 AT3G17180.1 37.668 446 208 11 34 412 34 476 6.49e-96 296
Msa0212290 AT5G23210.5 40.750 400 163 8 86 413 5 402 1.07e-93 288
Msa0212290 AT5G23210.3 40.000 420 183 11 22 377 35 449 1.42e-93 289
Msa0212290 AT5G23210.2 40.657 396 161 8 90 413 8 401 2.35e-92 284
Msa0212290 AT2G24010.4 44.011 359 137 10 42 342 4 356 1.30e-86 268
Msa0212290 AT3G52020.1 37.788 434 206 15 33 411 74 498 1.46e-86 273
Msa0212290 AT2G05850.1 35.698 437 211 13 34 411 59 484 3.65e-82 261
Msa0212290 AT5G42240.1 35.763 439 217 11 35 411 29 464 7.06e-81 257
Msa0212290 AT1G43780.1 34.852 439 221 11 43 418 41 477 1.97e-80 256
Msa0212290 AT3G17180.2 36.317 391 192 9 34 370 34 421 4.52e-80 254
Msa0212290 AT3G52010.1 35.160 438 211 16 34 411 60 484 5.00e-79 253
Msa0212290 AT2G12480.3 33.551 459 240 12 11 411 6 457 9.52e-79 251
Msa0212290 AT3G52000.1 36.085 424 205 15 43 411 67 479 1.02e-77 249
Msa0212290 AT5G23210.4 39.368 348 149 7 90 377 8 353 9.39e-76 240
Msa0212290 AT5G42230.1 33.718 433 223 10 41 411 30 460 1.74e-75 243
Msa0212290 AT5G42230.2 33.718 433 223 10 41 411 30 460 1.74e-75 243
Msa0212290 AT2G33530.1 34.188 468 230 16 11 411 6 462 2.56e-75 242
Msa0212290 AT1G28110.1 34.247 438 216 14 37 411 30 458 1.01e-71 233
Msa0212290 AT1G28110.2 34.247 438 216 14 37 411 30 458 1.01e-71 233
Msa0212290 AT2G12480.4 32.096 458 224 12 11 411 6 433 2.50e-70 229
Msa0212290 AT2G12480.2 31.590 459 224 11 11 411 6 432 4.22e-69 226
Msa0212290 AT2G12480.1 31.659 458 224 12 11 411 6 431 1.23e-68 224
Msa0212290 AT4G12910.1 29.095 464 229 12 43 410 38 497 6.99e-57 195
Msa0212290 AT3G25420.1 28.846 468 227 15 43 410 33 494 1.18e-52 184
Msa0212290 AT4G12910.2 27.981 411 209 10 43 370 38 444 4.11e-46 165
Msa0212290 AT3G56540.1 41.969 193 73 6 2 159 44 232 5.09e-38 139
Msa0212290 AT2G22990.5 26.379 417 240 15 43 410 26 424 5.02e-34 132
Msa0212290 AT2G22990.1 26.464 427 236 16 43 410 26 433 1.76e-33 130
Msa0212290 AT2G23000.1 27.670 412 209 17 42 387 27 415 4.32e-31 124
Msa0212290 AT2G23000.2 27.670 412 209 17 42 387 27 415 4.32e-31 124
Msa0212290 AT2G22920.2 26.230 427 237 14 43 410 28 435 2.35e-30 122
Msa0212290 AT2G22990.4 27.540 374 207 13 43 370 26 381 5.80e-30 120
Msa0212290 AT2G22990.3 27.540 374 207 13 43 370 26 381 7.93e-30 120
Msa0212290 AT2G22970.1 26.464 427 234 16 43 410 28 433 1.70e-29 119
Msa0212290 AT1G73270.1 25.995 427 238 14 42 410 35 441 5.34e-29 118
Msa0212290 AT1G73280.1 25.431 464 244 16 12 410 15 441 5.40e-29 118
Msa0212290 AT2G22980.1 25.822 426 228 16 43 407 29 427 5.49e-29 118
Msa0212290 AT1G73270.2 25.995 427 238 14 42 410 35 441 5.84e-29 118
Msa0212290 AT3G12220.2 27.338 417 217 16 51 407 12 402 3.23e-28 115
Msa0212290 AT3G10450.1 25.761 427 239 16 42 410 31 437 4.42e-28 115
Msa0212290 AT3G12220.1 27.506 429 221 17 43 407 30 432 6.97e-28 115
Msa0212290 AT1G73290.1 25.362 414 232 13 32 387 22 416 1.71e-27 114
Msa0212290 AT3G10450.2 25.672 409 230 15 56 410 6 394 2.59e-27 112
Msa0212290 AT2G22920.1 27.273 374 208 11 43 370 28 383 3.81e-27 112
Msa0212290 AT3G10410.1 26.852 432 223 19 54 421 103 505 3.83e-27 113
Msa0212290 AT3G12230.1 26.218 431 230 16 43 410 30 435 5.91e-27 112
Msa0212290 AT3G45010.1 25.635 433 231 16 46 412 97 504 6.39e-27 113
Msa0212290 AT5G22980.1 25.359 418 238 16 46 407 94 493 9.75e-27 112
Msa0212290 AT2G22970.3 26.392 413 225 15 43 396 28 420 1.53e-26 111
Msa0212290 AT2G22970.4 27.540 374 205 13 43 370 28 381 2.53e-26 110
Msa0212290 AT3G12240.1 25.986 431 231 16 43 410 31 436 4.82e-26 109
Msa0212290 AT2G22980.2 25.743 404 213 15 43 385 29 406 7.32e-26 108
Msa0212290 AT2G23010.1 25.926 405 223 13 43 387 28 415 1.06e-25 108
Msa0212290 AT2G22980.4 25.301 415 221 17 43 395 29 416 1.15e-25 108
Msa0212290 AT5G09640.1 25.225 444 244 16 42 407 29 462 1.37e-25 108
Msa0212290 AT1G73310.1 25.694 432 247 15 33 407 24 438 1.62e-25 108
Msa0212290 AT3G12203.3 25.629 437 224 16 43 410 12 416 4.41e-25 106
Msa0212290 AT3G12203.1 25.629 437 224 16 43 410 33 437 4.71e-25 107
Msa0212290 AT1G33540.1 24.594 431 244 15 48 407 41 461 4.97e-25 107
Msa0212290 AT2G23010.2 25.679 405 224 13 43 387 28 415 5.23e-25 106
Msa0212290 AT3G10450.4 27.083 384 214 14 34 370 21 385 6.42e-25 106
Msa0212290 AT1G73300.1 24.413 426 244 15 43 410 36 441 6.90e-25 106
Msa0212290 AT1G73300.2 24.413 426 244 15 43 410 36 441 6.90e-25 106
Msa0212290 AT1G33540.2 24.882 422 236 15 57 407 7 418 1.01e-24 105
Msa0212290 AT1G73290.2 29.317 249 132 6 32 238 22 268 2.04e-24 102
Msa0212290 AT3G10450.3 26.741 359 203 12 53 370 3 342 4.09e-24 103
Msa0212290 AT1G73290.3 24.740 384 225 11 32 370 22 386 4.21e-24 103
Msa0212290 AT3G12203.2 25.547 411 209 15 65 410 1 379 6.67e-24 102
Msa0212290 AT1G73280.2 29.893 281 141 8 2 238 3 271 8.56e-24 102
Msa0212290 AT2G22920.4 30.620 258 130 8 43 254 28 282 9.15e-24 101
Msa0212290 AT5G36180.1 24.065 428 239 16 42 407 35 438 1.99e-23 102
Msa0212290 AT1G73310.2 26.440 382 221 13 33 370 24 389 3.07e-23 101
Msa0212290 AT2G22980.3 29.344 259 129 9 43 254 29 280 4.28e-23 100
Msa0212290 AT2G22990.6 25.753 299 187 10 131 410 37 319 7.62e-22 95.9
Msa0212290 AT2G22970.2 29.457 258 132 9 43 254 28 281 9.75e-22 95.5
Msa0212290 AT2G22990.2 25.418 299 188 10 131 410 37 319 3.16e-21 94.4
Msa0212290 AT1G73280.3 25.688 327 192 12 110 410 13 314 1.34e-17 83.6
Msa0212290 AT1G73280.4 25.688 327 192 12 110 410 38 339 2.30e-17 83.2
Msa0212290 AT2G22980.5 25.000 276 162 11 131 385 38 289 1.13e-15 77.8
Msa0212290 AT1G73310.3 25.969 258 175 7 115 370 44 287 6.59e-13 69.7
Msa0212290 AT5G36180.5 23.077 299 186 11 131 407 60 336 6.68e-13 69.7
Msa0212290 AT5G36180.3 23.077 299 186 11 131 407 60 336 6.68e-13 69.7
Msa0212290 AT5G22960.1 31.469 143 77 7 54 181 38 174 8.12e-13 67.4

Find 108 sgRNAs with CRISPR-Local

Find 578 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAAGCTTGAGAGCATTTA+TGG 0.168879 2_1:+54314232 None:intergenic
TTCCTACCGGGCTGCGAATA+TGG 0.221269 2_1:-54314417 Msa0212290:CDS
TCACCTTGATTCCAAGAATA+TGG 0.233220 2_1:+54320638 None:intergenic
CAGATTCATGTAACAAAATC+TGG 0.238398 2_1:-54318473 Msa0212290:CDS
TATATTACCCATTTCTTCAT+AGG 0.262481 2_1:+54318443 None:intergenic
GGTTGTTCTTCTATTGCTTT+TGG 0.274232 2_1:-54320722 Msa0212290:CDS
TCTATCTTAATCCATATTCT+TGG 0.277859 2_1:-54320649 Msa0212290:CDS
CTGCAGGTCTGCCATTTATC+AGG 0.281846 2_1:+54314833 None:intergenic
ATATGATACATTCAAGTTCA+TGG 0.299028 2_1:-54313469 Msa0212290:three_prime_UTR
TCTTTATTTAAACCAGTCTT+TGG 0.304831 2_1:+54313377 None:intergenic
AATTTGAGACCAGTCAAAAT+TGG 0.305823 2_1:+54321000 None:intergenic
TTGTAATGATTTCATGCTTT+TGG 0.311131 2_1:-54313138 Msa0212290:three_prime_UTR
AAGAATATGGATTAAGATAG+AGG 0.318928 2_1:+54320651 None:intergenic
TCTTGCTCTTGTTGAACAAA+TGG 0.325060 2_1:+54320917 None:intergenic
ACGTGAGTCCGTCGTATTCT+TGG 0.330369 2_1:+54313625 None:intergenic
GGAAATTGCCTATGAAGAAA+TGG 0.335599 2_1:-54318451 Msa0212290:CDS
TACCACTGGACCACATAAAC+TGG 0.338363 2_1:+54318562 None:intergenic
GGCTGCGAATATGGATATTC+AGG 0.343847 2_1:-54314408 Msa0212290:intron
AGATGATTTCAGTGATCAAT+TGG 0.344814 2_1:-54318592 Msa0212290:CDS
TTGATCAAAGCCTTCTTAGA+AGG 0.346040 2_1:-54313540 Msa0212290:CDS
ATCAATGTTAGAGCAAGTTT+TGG 0.347763 2_1:+54313558 None:intergenic
TTTGGTGAAGCTGAAGAAAT+TGG 0.362938 2_1:-54320704 Msa0212290:CDS
TGTGATTTGTAACAGAGTTT+TGG 0.365530 2_1:-54314959 Msa0212290:intron
GAAAATCACATAGCAGATTC+AGG 0.369651 2_1:+54318514 None:intergenic
CAGATCATAAGCCTGATAAA+TGG 0.380720 2_1:-54314844 Msa0212290:CDS
GAATCTGATGGGTGTTCAAC+TGG 0.388550 2_1:+54318489 None:intergenic
ATTTGTCTTTATTAGAAAAC+AGG 0.401700 2_1:-54313427 Msa0212290:three_prime_UTR
CGTGAGTCCGTCGTATTCTT+GGG 0.415044 2_1:+54313626 None:intergenic
AATCCATATTCTTGGAATCA+AGG 0.418089 2_1:-54320641 Msa0212290:intron
TTATGGCTTAATGGTGGTCC+TGG 0.419091 2_1:-54320743 Msa0212290:CDS
CTTGCTCTTGTTGAACAAAT+GGG 0.422874 2_1:+54320918 None:intergenic
TTTGTCAATGTACGGGGTGC+AGG 0.423442 2_1:-54313603 Msa0212290:CDS
AGTACAACTCTCTTGATTCA+AGG 0.425568 2_1:+54313329 None:intergenic
GATGATTTCAGTGATCAATT+GGG 0.430253 2_1:-54318591 Msa0212290:CDS
GTGGTCCAGTGGTATGATTT+CGG 0.431503 2_1:-54318553 Msa0212290:CDS
GGAGGGGTAAAGATACTGTA+TGG 0.435053 2_1:+54318417 None:intergenic
GAAAAGAGTTGCCAATGTTA+TGG 0.440943 2_1:+54320973 None:intergenic
CATTTATCAGGCTTATGATC+TGG 0.443942 2_1:+54314845 None:intergenic
TTGTTCAACAAGAGCAAGAC+AGG 0.446307 2_1:-54320913 Msa0212290:CDS
CATGGAGGTTCCTTCTAAGA+AGG 0.450334 2_1:+54313530 None:intergenic
TGTAGAGCCCTTTGGACCTC+TGG 0.456216 2_1:+54314875 None:intergenic
ATCAGTGGTGAGAGCTATGC+AGG 0.459878 2_1:-54318903 Msa0212290:intron
GAATAGCGAGTAGATGCTAC+TGG 0.461334 2_1:+54314254 None:intergenic
GAAATTGCCTATGAAGAAAT+GGG 0.466008 2_1:-54318450 Msa0212290:intron
ATCTCATATTTCTATTGAAG+TGG 0.470740 2_1:-54318965 Msa0212290:CDS
TGGGGATGTTCCAGTTTATG+TGG 0.474009 2_1:-54318572 Msa0212290:CDS
TTTAAACCAGTCTTTGGTTG+AGG 0.474285 2_1:+54313383 None:intergenic
GATCAACATGTAGAGCCCTT+TGG 0.479007 2_1:+54314867 None:intergenic
AGTTGTACTTGACAATAACT+TGG 0.479516 2_1:+54318781 None:intergenic
CTGATAAATGGCAGACCTGC+AGG 0.481227 2_1:-54314832 Msa0212290:intron
GACTCACGTTTGTCAATGTA+CGG 0.496134 2_1:-54313611 Msa0212290:CDS
CTAATAAAGACAAATACAAA+AGG 0.504321 2_1:+54313435 None:intergenic
TATCATTCGCATGGCAAGGA+GGG 0.505028 2_1:+54318400 None:intergenic
GTGATGTGGTAGGTACTAAC+TGG 0.511426 2_1:-54314483 Msa0212290:CDS
GTTGTTCCTCAACCAAAGAC+TGG 0.512076 2_1:-54313389 Msa0212290:three_prime_UTR
AAAGACTGGTTTAAATAAAG+AGG 0.512602 2_1:-54313375 Msa0212290:three_prime_UTR
TATCGTGAACTTATTCCTAC+CGG 0.514663 2_1:-54314430 Msa0212290:CDS
AAAAGAAGTGGCTTTGAAGT+AGG 0.515908 2_1:+54320764 None:intergenic
CAAGATTCTATAAATCTCAA+AGG 0.526039 2_1:-54318747 Msa0212290:CDS
CAACAAGAGCAAGACAGGAT+TGG 0.532184 2_1:-54320908 Msa0212290:CDS
ATGTGAAATTGTTGTTGCAT+AGG 0.542401 2_1:+54320951 None:intergenic
AAGATTCTATAAATCTCAAA+GGG 0.543820 2_1:-54318746 Msa0212290:CDS
ACTCACGTTTGTCAATGTAC+GGG 0.547857 2_1:-54313610 Msa0212290:CDS
TATAAATCTCAAAGGGTACA+TGG 0.549630 2_1:-54318739 Msa0212290:intron
TTCCAGTTTATGTGGTCCAG+TGG 0.552998 2_1:-54318564 Msa0212290:CDS
AGATTCATGTAACAAAATCT+GGG 0.553769 2_1:-54318472 Msa0212290:CDS
GCATCAGAATTAATATGGAA+AGG 0.556056 2_1:+54320680 None:intergenic
TGGTTATATAACAGTGAATG+AGG 0.560384 2_1:-54320837 Msa0212290:intron
AGTGTGCGTGGTTCAAGAGT+TGG 0.567712 2_1:+54313507 None:intergenic
CAATCGACCAGAGGTCCAAA+GGG 0.569543 2_1:-54314882 Msa0212290:CDS
TCAATCGACCAGAGGTCCAA+AGG 0.570553 2_1:-54314883 Msa0212290:CDS
CCATGCGAATGATAATCAGC+TGG 0.571298 2_1:-54318391 Msa0212290:CDS
CCAGCTGATTATCATTCGCA+TGG 0.574427 2_1:+54318391 None:intergenic
TTGTCAATGTACGGGGTGCA+GGG 0.575365 2_1:-54313602 Msa0212290:CDS
TGATTATCATTCGCATGGCA+AGG 0.582514 2_1:+54318396 None:intergenic
ATTTATTGCAGTGATGTGGT+AGG 0.588890 2_1:-54314493 Msa0212290:intron
ATGATTTCAGTGATCAATTG+GGG 0.589122 2_1:-54318590 Msa0212290:CDS
TATCATTTATTGCAGTGATG+TGG 0.589586 2_1:-54314497 Msa0212290:intron
TTGATCCGAAATCATACCAC+TGG 0.589667 2_1:+54318548 None:intergenic
AGAATATGGATTAAGATAGA+GGG 0.589906 2_1:+54320652 None:intergenic
ATCATTCGCATGGCAAGGAG+GGG 0.589954 2_1:+54318401 None:intergenic
TGTCTTTATTAGAAAACAGG+TGG 0.592018 2_1:-54313424 Msa0212290:three_prime_UTR
ATAACAGTGAATGAGGATGC+TGG 0.592957 2_1:-54320830 Msa0212290:intron
GAAACAATCAGGTAGGAGGA+TGG 0.593228 2_1:-54313650 Msa0212290:intron
GAATATCCATATTCGCAGCC+CGG 0.593696 2_1:+54314411 None:intergenic
AAGTGAAACAATCAGGTAGG+AGG 0.598460 2_1:-54313654 Msa0212290:intron
CCATTAAGCCATAAAAGAAG+TGG 0.599202 2_1:+54320752 None:intergenic
ACAATAACTTGGCTAAGTTG+CGG 0.601372 2_1:+54318792 None:intergenic
ATGCTGTGTTTCTCTGTGCA+AGG 0.604550 2_1:+54314914 None:intergenic
GCGTGGTTCAAGAGTTGGCA+TGG 0.605789 2_1:+54313512 None:intergenic
AGGATTGGCATAGCACTCCC+AGG 0.605982 2_1:-54320893 Msa0212290:CDS
ATTGCGGCGGTGAGTGTGCG+TGG 0.608832 2_1:+54313495 None:intergenic
ATCGTGAACTTATTCCTACC+GGG 0.615836 2_1:-54314429 Msa0212290:CDS
GAATGTATCATATCAAATTG+CGG 0.625594 2_1:+54313479 None:intergenic
GAGGGGTAAAGATACTGTAT+GGG 0.629985 2_1:+54318418 None:intergenic
AATAGCGAGTAGATGCTACT+GGG 0.645704 2_1:+54314255 None:intergenic
CAGTGAATGAGGATGCTGGT+AGG 0.647420 2_1:-54320826 Msa0212290:CDS
TGTGGTAGGTACTAACTGGA+AGG 0.648375 2_1:-54314479 Msa0212290:CDS
CTCACGTTTGTCAATGTACG+GGG 0.653832 2_1:-54313609 Msa0212290:CDS
ATCCATATTCGCAGCCCGGT+AGG 0.671726 2_1:+54314415 None:intergenic
AAAGCAATAGAAGAACAACC+AGG 0.674686 2_1:+54320725 None:intergenic
GTGAGACTAATCAATCAACT+CGG 0.694210 2_1:+54313283 None:intergenic
TGGTTCAAGAGTTGGCATGG+AGG 0.699329 2_1:+54313515 None:intergenic
TATATATTGAGCACTGACGT+AGG 0.704394 2_1:+54314451 None:intergenic
GGATGGACCCAAGAATACGA+CGG 0.705104 2_1:-54313633 Msa0212290:CDS
TGTATACTTCAATCGACCAG+AGG 0.705352 2_1:-54314891 Msa0212290:CDS
TTATCATTCGCATGGCAAGG+AGG 0.711217 2_1:+54318399 None:intergenic
TGTATCATATCAAATTGCGG+CGG 0.722352 2_1:+54313482 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAGAAATATTGTATT+GGG + chr2_1:54314736-54314755 None:intergenic 10.0%
!! TGATTAAAAAAGTTAATTAT+CGG + chr2_1:54318953-54318972 None:intergenic 10.0%
!! CAATTATATCATTTAATAAT+TGG - chr2_1:54319501-54319520 Msa0212290:intron 10.0%
!! ATTTAAAGATGATTTGATAA+AGG + chr2_1:54313972-54313991 None:intergenic 15.0%
!!! AGTTAAATTGTTTTCATATA+AGG - chr2_1:54314227-54314246 Msa0212290:intron 15.0%
!! CAAATATAGAAATATTGTAT+TGG + chr2_1:54314737-54314756 None:intergenic 15.0%
!!! ATCTGAACATAAATTATTTT+AGG + chr2_1:54314799-54314818 None:intergenic 15.0%
!! TAGATTAATTAATACTGAAA+TGG - chr2_1:54316072-54316091 Msa0212290:intron 15.0%
!!! CTATGATTGTATAAATATTT+TGG - chr2_1:54317621-54317640 Msa0212290:intron 15.0%
!!! TTATGAATTTGTTATAAACA+TGG + chr2_1:54319580-54319599 None:intergenic 15.0%
!!! TTTTTTCCTAAAGTAATTTT+AGG - chr2_1:54319762-54319781 Msa0212290:intron 15.0%
!! AGTATATTAATCATAAGTAT+TGG - chr2_1:54320249-54320268 Msa0212290:intron 15.0%
!! TAGTAAATGAGAAAATATTA+AGG + chr2_1:54320393-54320412 None:intergenic 15.0%
!!! TTTTAGCATCAGAATTAATA+TGG + chr2_1:54313442-54313461 None:intergenic 20.0%
!! GTAATTAGTGTATTTGTAAA+TGG + chr2_1:54313897-54313916 None:intergenic 20.0%
!! TTATGAAAATAAGCTGAAAA+TGG - chr2_1:54314283-54314302 Msa0212290:intron 20.0%
!! CAATTGACATAAATGAAAAA+TGG + chr2_1:54315082-54315101 None:intergenic 20.0%
!! AAGATTCTATAAATCTCAAA+GGG - chr2_1:54315368-54315387 Msa0212290:intron 20.0%
!!! TTGTTTTATCTTGTCTTTAA+AGG - chr2_1:54315787-54315806 Msa0212290:intron 20.0%
!! GCATCTTAAATTAATTTAGA+AGG + chr2_1:54315946-54315965 None:intergenic 20.0%
!!! AATTTAAGTTTGTGAATGAT+TGG + chr2_1:54316144-54316163 None:intergenic 20.0%
!!! TTCAATTTGTTGATAAGTTT+TGG + chr2_1:54317049-54317068 None:intergenic 20.0%
!! TACAATTATGGTTCTTTATT+TGG - chr2_1:54317249-54317268 Msa0212290:intron 20.0%
!!! ATAAGAAAAGCATTAATTGA+TGG - chr2_1:54317665-54317684 Msa0212290:intron 20.0%
!!! TTTTGAGAGATCATTTTTTA+AGG - chr2_1:54318187-54318206 Msa0212290:intron 20.0%
!!! TTTGAGAGATCATTTTTTAA+GGG - chr2_1:54318188-54318207 Msa0212290:intron 20.0%
!!! TTTGTTTTGAGAGTATTATA+GGG - chr2_1:54318244-54318263 Msa0212290:intron 20.0%
!! TAGATTAACCTAATTTAACT+TGG - chr2_1:54318729-54318748 Msa0212290:intron 20.0%
!! ATACATTTGTGATATGAATA+AGG + chr2_1:54319136-54319155 None:intergenic 20.0%
!!! TTCGTAGTATATTTGAAATA+AGG + chr2_1:54319379-54319398 None:intergenic 20.0%
!! CTGCAATAAATGATAATAAT+TGG + chr2_1:54319612-54319631 None:intergenic 20.0%
!! AACTCAAAAAATTGTATTGA+GGG - chr2_1:54320143-54320162 Msa0212290:intron 20.0%
!! GTTGGAAATATATAGAAAAA+TGG + chr2_1:54320324-54320343 None:intergenic 20.0%
!!! AAAATATTAAGGCTTTGTTT+GGG + chr2_1:54320382-54320401 None:intergenic 20.0%
!! CTAATAAAGACAAATACAAA+AGG + chr2_1:54320682-54320701 None:intergenic 20.0%
!! ATTTGTCTTTATTAGAAAAC+AGG - chr2_1:54320687-54320706 Msa0212290:CDS 20.0%
!!! CTACTTACAAATATTTTGAT+TGG - chr2_1:54320858-54320877 Msa0212290:CDS 20.0%
!! AGAATATGGATTAAGATAGA+GGG + chr2_1:54313465-54313484 None:intergenic 25.0%
!! AAGAATATGGATTAAGATAG+AGG + chr2_1:54313466-54313485 None:intergenic 25.0%
! TCTATCTTAATCCATATTCT+TGG - chr2_1:54313465-54313484 Msa0212290:three_prime_UTR 25.0%
!! ACAAAACACAGATACATTTT+TGG + chr2_1:54313533-54313552 None:intergenic 25.0%
!!! TTCATGTGTTTGTTTTCAAT+TGG - chr2_1:54313562-54313581 Msa0212290:CDS 25.0%
!!! TCATGTGTTTGTTTTCAATT+GGG - chr2_1:54313563-54313582 Msa0212290:CDS 25.0%
! AGATTTGTCCCTTTATTAAT+CGG - chr2_1:54313605-54313624 Msa0212290:CDS 25.0%
!!! ATTTCATTTGTGTTTGTTGT+CGG - chr2_1:54313680-54313699 Msa0212290:intron 25.0%
! TTAGTGTATTTGTAAATGGA+TGG + chr2_1:54313893-54313912 None:intergenic 25.0%
! AATACACTAATTACATGCAT+TGG - chr2_1:54313903-54313922 Msa0212290:intron 25.0%
!!! CTTAACCATTGATTTAAGAT+TGG - chr2_1:54313995-54314014 Msa0212290:intron 25.0%
! TTCATCCAATCTTAAATCAA+TGG + chr2_1:54314003-54314022 None:intergenic 25.0%
! AAACTTATGAAAATGGCTTA+TGG + chr2_1:54314322-54314341 None:intergenic 25.0%
! TATGGGAAAACTTATGAAAA+TGG + chr2_1:54314329-54314348 None:intergenic 25.0%
!! AACTTTTTGCAAAATTGAGT+TGG - chr2_1:54314589-54314608 Msa0212290:intron 25.0%
!!! ATTGAGTTGGATGTAAAATA+AGG - chr2_1:54314602-54314621 Msa0212290:intron 25.0%
!!! TTGAGTTGGATGTAAAATAA+GGG - chr2_1:54314603-54314622 Msa0212290:intron 25.0%
! ATATTTGTTTACTTAACCGA+TGG - chr2_1:54314750-54314769 Msa0212290:intron 25.0%
!!! AATTGATTTTTCATCCACAA+TGG + chr2_1:54314899-54314918 None:intergenic 25.0%
! TGACATAAATGAAAAATGGT+TGG + chr2_1:54315078-54315097 None:intergenic 25.0%
!! ATCTCATATTTCTATTGAAG+TGG - chr2_1:54315149-54315168 Msa0212290:intron 25.0%
!!! AAAGTCTGTGTTTTTATACT+GGG + chr2_1:54315188-54315207 None:intergenic 25.0%
!!! AAAAGTCTGTGTTTTTATAC+TGG + chr2_1:54315189-54315208 None:intergenic 25.0%
! CAAGATTCTATAAATCTCAA+AGG - chr2_1:54315367-54315386 Msa0212290:intron 25.0%
!!! TACTAGTTTTTGTGCAAAAA+TGG + chr2_1:54315409-54315428 None:intergenic 25.0%
! GATCTAACTGTTCAAAAAAA+TGG + chr2_1:54315438-54315457 None:intergenic 25.0%
! GATTCAGTTAATAATGTGAA+AGG + chr2_1:54315460-54315479 None:intergenic 25.0%
!! TTTTGTTACATGAATCTGAT+GGG + chr2_1:54315639-54315658 None:intergenic 25.0%
!! ATTTTGTTACATGAATCTGA+TGG + chr2_1:54315640-54315659 None:intergenic 25.0%
! AGATTCATGTAACAAAATCT+GGG - chr2_1:54315642-54315661 Msa0212290:intron 25.0%
! TATATTACCCATTTCTTCAT+AGG + chr2_1:54315674-54315693 None:intergenic 25.0%
!! TTTAAAGGTTCTAATATCGT+TGG - chr2_1:54315802-54315821 Msa0212290:intron 25.0%
! AAAACGGCGAAAAAAATATA+AGG + chr2_1:54316244-54316263 None:intergenic 25.0%
! AGCAACACATTATAAACATA+AGG - chr2_1:54316393-54316412 Msa0212290:intron 25.0%
! GCAACACATTATAAACATAA+GGG - chr2_1:54316394-54316413 Msa0212290:intron 25.0%
!! ATGTGTTGAAAATTAGTTTG+AGG + chr2_1:54316534-54316553 None:intergenic 25.0%
!! AGATTTTGTAAAACAGCAAA+AGG + chr2_1:54316619-54316638 None:intergenic 25.0%
! ATATGAAAGGTTGAATTGAA+TGG + chr2_1:54316740-54316759 None:intergenic 25.0%
!!! TACATTTTGAAGCATATGAA+AGG + chr2_1:54316753-54316772 None:intergenic 25.0%
!! TAAAGATGAATTTTGTCTCA+TGG - chr2_1:54316806-54316825 Msa0212290:intron 25.0%
! AATCTGTTAATAAGCACAAA+AGG + chr2_1:54316869-54316888 None:intergenic 25.0%
! GTTTAATTGAAGTTCTATCA+AGG + chr2_1:54316943-54316962 None:intergenic 25.0%
! AATCTGAATCTGTACAATTA+TGG - chr2_1:54317237-54317256 Msa0212290:intron 25.0%
! AACCTTGGATATATTTAGTT+TGG - chr2_1:54317304-54317323 Msa0212290:intron 25.0%
!! ACCTTGGATATATTTAGTTT+GGG - chr2_1:54317305-54317324 Msa0212290:intron 25.0%
! AGTGATATAATATTTACTGC+CGG + chr2_1:54317375-54317394 None:intergenic 25.0%
!!! AACAGTTTTAAGATTCAACA+AGG - chr2_1:54317434-54317453 Msa0212290:intron 25.0%
!!! GTATTTCTGTTTTTAGAGTT+CGG - chr2_1:54317555-54317574 Msa0212290:intron 25.0%
!!! TGATGGATTCACTATTTATT+TGG - chr2_1:54317682-54317701 Msa0212290:intron 25.0%
! TTGCAGAACCAAAAATTATA+GGG + chr2_1:54317852-54317871 None:intergenic 25.0%
! ATTGCAGAACCAAAAATTAT+AGG + chr2_1:54317853-54317872 None:intergenic 25.0%
! CTATGGTAACTAAATTAGAA+AGG - chr2_1:54317979-54317998 Msa0212290:intron 25.0%
! ATGATCTCTCAAAAAATTGA+GGG + chr2_1:54318181-54318200 None:intergenic 25.0%
! AATGATCTCTCAAAAAATTG+AGG + chr2_1:54318182-54318201 None:intergenic 25.0%
!!! GTTTGTTTTGAGAGTATTAT+AGG - chr2_1:54318243-54318262 Msa0212290:intron 25.0%
!! GAGATTTTATTCTTCTTCAT+TGG + chr2_1:54318332-54318351 None:intergenic 25.0%
! AGAGAAAATGAACTAATGAA+GGG + chr2_1:54318377-54318396 None:intergenic 25.0%
! AAGAGAAAATGAACTAATGA+AGG + chr2_1:54318378-54318397 None:intergenic 25.0%
!!! ATTAACCTAATTTAACTTGG+TGG - chr2_1:54318732-54318751 Msa0212290:intron 25.0%
! TGTGATAATTGAGATTGTTA+TGG + chr2_1:54318991-54319010 None:intergenic 25.0%
! GTGTAGAATTTCTATCATTA+TGG + chr2_1:54319020-54319039 None:intergenic 25.0%
!! TCAAAACAGAAACTTTTGAA+AGG - chr2_1:54319311-54319330 Msa0212290:intron 25.0%
!! GTAGTATATTTGAAATAAGG+TGG + chr2_1:54319376-54319395 None:intergenic 25.0%
! AACTAAACGAAGAAAATAGA+TGG + chr2_1:54319972-54319991 None:intergenic 25.0%
!! TCTATTTTCTTCGTTTAGTT+AGG - chr2_1:54319972-54319991 Msa0212290:intron 25.0%
! GAACTCAAAAAATTGTATTG+AGG - chr2_1:54320142-54320161 Msa0212290:intron 25.0%
! AAAAAATTGTATTGAGGGAT+TGG - chr2_1:54320148-54320167 Msa0212290:intron 25.0%
! AAAAATTGTATTGAGGGATT+GGG - chr2_1:54320149-54320168 Msa0212290:intron 25.0%
!!! GAAAATATTAAGGCTTTGTT+TGG + chr2_1:54320383-54320402 None:intergenic 25.0%
! GAATGTATCATATCAAATTG+CGG + chr2_1:54320638-54320657 None:intergenic 25.0%
!! ATATGATACATTCAAGTTCA+TGG - chr2_1:54320645-54320664 Msa0212290:CDS 25.0%
!! TCTTTATTTAAACCAGTCTT+TGG + chr2_1:54320740-54320759 None:intergenic 25.0%
!!! AAAGACTGGTTTAAATAAAG+AGG - chr2_1:54320739-54320758 Msa0212290:CDS 25.0%
!!! TACAAATATTTTGATTGGCA+AGG - chr2_1:54320863-54320882 Msa0212290:CDS 25.0%
!!! ATCAATCAATACCATTTTTG+AGG + chr2_1:54320899-54320918 None:intergenic 25.0%
!! TTGTAATGATTTCATGCTTT+TGG - chr2_1:54320976-54320995 Msa0212290:CDS 25.0%
! AATTTGAGACCAGTCAAAAT+TGG + chr2_1:54313117-54313136 None:intergenic 30.0%
! TCAAATTTTCGCCATAACAT+TGG - chr2_1:54313130-54313149 Msa0212290:three_prime_UTR 30.0%
! ATGTGAAATTGTTGTTGCAT+AGG + chr2_1:54313166-54313185 None:intergenic 30.0%
!! TGATATTGAAGTTTTGACCT+GGG + chr2_1:54313241-54313260 None:intergenic 30.0%
!!! ATCAGTTTTGAACACTATTC+TGG - chr2_1:54313257-54313276 Msa0212290:three_prime_UTR 30.0%
TGGTTATATAACAGTGAATG+AGG - chr2_1:54313277-54313296 Msa0212290:three_prime_UTR 30.0%
GCATCAGAATTAATATGGAA+AGG + chr2_1:54313437-54313456 None:intergenic 30.0%
AATCCATATTCTTGGAATCA+AGG - chr2_1:54313473-54313492 Msa0212290:exon 30.0%
!! ACACAGATACATTTTTGGAA+AGG + chr2_1:54313528-54313547 None:intergenic 30.0%
TCCCTTTATTAATCGGTTAT+TGG - chr2_1:54313612-54313631 Msa0212290:CDS 30.0%
CCCAATAACCGATTAATAAA+GGG + chr2_1:54313616-54313635 None:intergenic 30.0%
CCCTTTATTAATCGGTTATT+GGG - chr2_1:54313613-54313632 Msa0212290:CDS 30.0%
ACCCAATAACCGATTAATAA+AGG + chr2_1:54313617-54313636 None:intergenic 30.0%
TTATTAATCGGTTATTGGGT+CGG - chr2_1:54313617-54313636 Msa0212290:CDS 30.0%
CGAGTCAATATAAAGAATGT+TGG + chr2_1:54313775-54313794 None:intergenic 30.0%
GTAATTCAAATCCCACTTTA+TGG - chr2_1:54314034-54314053 Msa0212290:intron 30.0%
! AAGTTTTTGTGACACTGTAT+GGG + chr2_1:54314346-54314365 None:intergenic 30.0%
! TAAGTTTTTGTGACACTGTA+TGG + chr2_1:54314347-54314366 None:intergenic 30.0%
TAGTTCATTGAACACATGTT+TGG + chr2_1:54314399-54314418 None:intergenic 30.0%
!!! TGTTCAATGAACTAGTCTTT+TGG - chr2_1:54314405-54314424 Msa0212290:intron 30.0%
!!! GTTCAATGAACTAGTCTTTT+GGG - chr2_1:54314406-54314425 Msa0212290:intron 30.0%
ATAAACTTCACTTCTTAGGT+GGG + chr2_1:54314531-54314550 None:intergenic 30.0%
AATAAACTTCACTTCTTAGG+TGG + chr2_1:54314532-54314551 None:intergenic 30.0%
CACAATAAACTTCACTTCTT+AGG + chr2_1:54314535-54314554 None:intergenic 30.0%
TTATTGTGTTTGTATTGCAG+TGG - chr2_1:54314547-54314566 Msa0212290:intron 30.0%
! GATTCAAGTTAAAACCATTG+TGG - chr2_1:54314882-54314901 Msa0212290:CDS 30.0%
!! AAGTCTGTGTTTTTATACTG+GGG + chr2_1:54315187-54315206 None:intergenic 30.0%
! ATTCTAGATTTCCTTGTTTC+AGG - chr2_1:54315289-54315308 Msa0212290:intron 30.0%
AGTTGTACTTGACAATAACT+TGG + chr2_1:54315336-54315355 None:intergenic 30.0%
! TATAAATCTCAAAGGGTACA+TGG - chr2_1:54315375-54315394 Msa0212290:intron 30.0%
AGATGATTTCAGTGATCAAT+TGG - chr2_1:54315522-54315541 Msa0212290:intron 30.0%
GATGATTTCAGTGATCAATT+GGG - chr2_1:54315523-54315542 Msa0212290:intron 30.0%
ATGATTTCAGTGATCAATTG+GGG - chr2_1:54315524-54315543 Msa0212290:intron 30.0%
CAGATTCATGTAACAAAATC+TGG - chr2_1:54315641-54315660 Msa0212290:intron 30.0%
GAAATTGCCTATGAAGAAAT+GGG - chr2_1:54315664-54315683 Msa0212290:intron 30.0%
AATGATTCTGTCCAGATAAA+TGG - chr2_1:54315914-54315933 Msa0212290:intron 30.0%
! ACTTTTGTTAGTAAGTGACT+AGG - chr2_1:54315995-54316014 Msa0212290:intron 30.0%
TAAATTTCACTCTAAGCTCT+CGG - chr2_1:54316158-54316177 Msa0212290:intron 30.0%
GGCGAAAAAAATATAAGGAT+TGG + chr2_1:54316239-54316258 None:intergenic 30.0%
ACAGTTGGATATTATCTTTG+AGG - chr2_1:54316274-54316293 Msa0212290:intron 30.0%
CAGTTGGATATTATCTTTGA+GGG - chr2_1:54316275-54316294 Msa0212290:intron 30.0%
! CACTATGATTTGCCATTAAT+TGG + chr2_1:54316332-54316351 None:intergenic 30.0%
! CTAATTTTCAACACATGTGA+TGG - chr2_1:54316538-54316557 Msa0212290:intron 30.0%
ATAAAAGATAGAGTCAGAAG+AGG + chr2_1:54317137-54317156 None:intergenic 30.0%
! TTGTACAGATTCAGATTTTC+AGG + chr2_1:54317234-54317253 None:intergenic 30.0%
TTAATCATCCATATGAGTCT+TGG - chr2_1:54317275-54317294 Msa0212290:intron 30.0%
TCCCAAACTAAATATATCCA+AGG + chr2_1:54317309-54317328 None:intergenic 30.0%
!! TATATTTAGTTTGGGACAGA+AGG - chr2_1:54317313-54317332 Msa0212290:intron 30.0%
GGAAATTACAATTTGAATCC+TGG - chr2_1:54317341-54317360 Msa0212290:intron 30.0%
!!! TCAAAAAAAGTCATCGGTTT+TGG + chr2_1:54317486-54317505 None:intergenic 30.0%
AAGTGCTCAAAAAAAGTCAT+CGG + chr2_1:54317492-54317511 None:intergenic 30.0%
!!! TGTTTTTAGAGTTCGGAATT+CGG - chr2_1:54317562-54317581 Msa0212290:intron 30.0%
!! ATGGGGTTTTATCGAATATT+CGG + chr2_1:54317767-54317786 None:intergenic 30.0%
! TTACACAGAAAGAGTATGAT+GGG + chr2_1:54317785-54317804 None:intergenic 30.0%
ATCATACTCTTTCTGTGTAA+CGG - chr2_1:54317785-54317804 Msa0212290:intron 30.0%
TGCAGAACCAAAAATTATAG+GGG + chr2_1:54317851-54317870 None:intergenic 30.0%
GAAATATGTTAGGGTAAGAA+AGG - chr2_1:54317908-54317927 Msa0212290:intron 30.0%
TGGTAACTAAATTAGAAAGG+AGG - chr2_1:54317982-54318001 Msa0212290:intron 30.0%
AGTATAGTAATATTCAGGAG+AGG - chr2_1:54318030-54318049 Msa0212290:intron 30.0%
GTATAGTAATATTCAGGAGA+GGG - chr2_1:54318031-54318050 Msa0212290:intron 30.0%
TGAGAAAAATGGAAAGATAG+TGG - chr2_1:54318152-54318171 Msa0212290:intron 30.0%
GAAGAATAAAATCTCATGCA+AGG - chr2_1:54318337-54318356 Msa0212290:intron 30.0%
AATAAAATCTCATGCAAGGT+TGG - chr2_1:54318341-54318360 Msa0212290:intron 30.0%
ATAAAATCTCATGCAAGGTT+GGG - chr2_1:54318342-54318361 Msa0212290:intron 30.0%
!! TTGGTGTTATTCAAACTATC+AGG + chr2_1:54318470-54318489 None:intergenic 30.0%
ATAGTTTGAATAACACCAAG+TGG - chr2_1:54318471-54318490 Msa0212290:CDS 30.0%
TAGTTTGAATAACACCAAGT+GGG - chr2_1:54318472-54318491 Msa0212290:CDS 30.0%
CTTATCCACCAAGTTAAATT+AGG + chr2_1:54318740-54318759 None:intergenic 30.0%
!!! TGGTTACTGGTTTTCATAAA+GGG + chr2_1:54318823-54318842 None:intergenic 30.0%
!!! TTGGTTACTGGTTTTCATAA+AGG + chr2_1:54318824-54318843 None:intergenic 30.0%
AATATACCTTTCTTGGTTAC+TGG + chr2_1:54318836-54318855 None:intergenic 30.0%
! GTAACCAAGAAAGGTATATT+CGG - chr2_1:54318836-54318855 Msa0212290:intron 30.0%
!! TGTGATTTGTAACAGAGTTT+TGG - chr2_1:54319155-54319174 Msa0212290:intron 30.0%
TACGAACTGAAATGTAGAAA+TGG - chr2_1:54319393-54319412 Msa0212290:intron 30.0%
ACTGAAAACAGAAATACTGT+CGG - chr2_1:54319428-54319447 Msa0212290:intron 30.0%
!!! GTACTGACTTCAAGAATTTT+AGG - chr2_1:54319523-54319542 Msa0212290:intron 30.0%
TATCATTTATTGCAGTGATG+TGG - chr2_1:54319617-54319636 Msa0212290:intron 30.0%
TGGAAGAAATAGAAGACATT+GGG - chr2_1:54320060-54320079 Msa0212290:intron 30.0%
AATAAAAAATCCCCCTCATT+TGG - chr2_1:54320117-54320136 Msa0212290:intron 30.0%
ATAAAAAATCCCCCTCATTT+GGG - chr2_1:54320118-54320137 Msa0212290:intron 30.0%
AAAATTGTATTGAGGGATTG+GGG - chr2_1:54320150-54320169 Msa0212290:intron 30.0%
GATATCTAAGTGAAACAATC+AGG - chr2_1:54320453-54320472 Msa0212290:intron 30.0%
! ATCAATGTTAGAGCAAGTTT+TGG + chr2_1:54320559-54320578 None:intergenic 30.0%
TGTCTTTATTAGAAAACAGG+TGG - chr2_1:54320690-54320709 Msa0212290:CDS 30.0%
GACAAAGAAAACCTCAAAAA+TGG - chr2_1:54320885-54320904 Msa0212290:CDS 30.0%
! AATGATTTCATGCTTTTGGT+AGG - chr2_1:54320980-54320999 Msa0212290:CDS 30.0%
GAAAAGAGTTGCCAATGTTA+TGG + chr2_1:54313144-54313163 None:intergenic 35.0%
CTTGCTCTTGTTGAACAAAT+GGG + chr2_1:54313199-54313218 None:intergenic 35.0%
TCTTGCTCTTGTTGAACAAA+TGG + chr2_1:54313200-54313219 None:intergenic 35.0%
!! CTGATATTGAAGTTTTGACC+TGG + chr2_1:54313242-54313261 None:intergenic 35.0%
!! AAAAGAAGTGGCTTTGAAGT+AGG + chr2_1:54313353-54313372 None:intergenic 35.0%
! CTTCAAAGCCACTTCTTTTA+TGG - chr2_1:54313354-54313373 Msa0212290:three_prime_UTR 35.0%
CCATTAAGCCATAAAAGAAG+TGG + chr2_1:54313365-54313384 None:intergenic 35.0%
! CCACTTCTTTTATGGCTTAA+TGG - chr2_1:54313362-54313381 Msa0212290:three_prime_UTR 35.0%
! CTTCTTTTATGGCTTAATGG+TGG - chr2_1:54313365-54313384 Msa0212290:three_prime_UTR 35.0%
AAAGCAATAGAAGAACAACC+AGG + chr2_1:54313392-54313411 None:intergenic 35.0%
! GGTTGTTCTTCTATTGCTTT+TGG - chr2_1:54313392-54313411 Msa0212290:three_prime_UTR 35.0%
TTTGGTGAAGCTGAAGAAAT+TGG - chr2_1:54313410-54313429 Msa0212290:three_prime_UTR 35.0%
TCACCTTGATTCCAAGAATA+TGG + chr2_1:54313479-54313498 None:intergenic 35.0%
!! TTACATGCATTGGTTGATCT+CGG - chr2_1:54313913-54313932 Msa0212290:intron 35.0%
TTCAAATCCCACTTTATGGT+AGG - chr2_1:54314038-54314057 Msa0212290:intron 35.0%
TGAAACACCTACCATAAAGT+GGG + chr2_1:54314048-54314067 None:intergenic 35.0%
TATGGTAGGTGTTTCACATT+AGG - chr2_1:54314052-54314071 Msa0212290:intron 35.0%
TGAGACTTACTATATGCCAA+AGG - chr2_1:54314091-54314110 Msa0212290:intron 35.0%
GCTTATGTTCATGATATGGA+GGG - chr2_1:54314446-54314465 Msa0212290:CDS 35.0%
TTCTTTAACTAGAGCTCTCA+GGG + chr2_1:54314645-54314664 None:intergenic 35.0%
AGAAATATTGTATTGGGCAG+TGG + chr2_1:54314730-54314749 None:intergenic 35.0%
! AGCCATAAAATCACGTTTTC+AGG - chr2_1:54314854-54314873 Msa0212290:CDS 35.0%
! GACCTGAAAACGTGATTTTA+TGG + chr2_1:54314859-54314878 None:intergenic 35.0%
CCAAAACAACTAGACCATTA+GGG + chr2_1:54315021-54315040 None:intergenic 35.0%
TCCAAAACAACTAGACCATT+AGG + chr2_1:54315022-54315041 None:intergenic 35.0%
! TTTTGGATGAGTTCTCCTTT+AGG - chr2_1:54315035-54315054 Msa0212290:intron 35.0%
TTTGGATGAGTTCTCCTTTA+GGG - chr2_1:54315036-54315055 Msa0212290:intron 35.0%
!! AAATGGTTGGTAAAGCGTTA+TGG + chr2_1:54315065-54315084 None:intergenic 35.0%
TAATTCTTTATGTGCAGCTG+AGG - chr2_1:54315123-54315142 Msa0212290:intron 35.0%
!!! AACACAGACTTTTTCATCAG+TGG - chr2_1:54315196-54315215 Msa0212290:intron 35.0%
CACAAATGGTGAGATAGATA+AGG - chr2_1:54315238-54315257 Msa0212290:intron 35.0%
GAACATAATGTCCTGAAACA+AGG + chr2_1:54315303-54315322 None:intergenic 35.0%
ACAATAACTTGGCTAAGTTG+CGG + chr2_1:54315325-54315344 None:intergenic 35.0%
GAAAATCACATAGCAGATTC+AGG + chr2_1:54315603-54315622 None:intergenic 35.0%
GGAAATTGCCTATGAAGAAA+TGG - chr2_1:54315663-54315682 Msa0212290:intron 35.0%
! GATGATTTTCCTGTTTGTGA+TGG - chr2_1:54315830-54315849 Msa0212290:intron 35.0%
AACTGTTGTGATGCTGAAAA+CGG + chr2_1:54316260-54316279 None:intergenic 35.0%
! ACTGATTCAGTTTGAATCTC+TGG - chr2_1:54316301-54316320 Msa0212290:intron 35.0%
TCTCTGGTAACACCAATTAA+TGG - chr2_1:54316317-54316336 Msa0212290:intron 35.0%
ATCATAGTGATTAGACGTTG+AGG - chr2_1:54316343-54316362 Msa0212290:intron 35.0%
TGGCTATTCCAAAACTATCT+TGG - chr2_1:54316464-54316483 Msa0212290:intron 35.0%
!! AACACATGTGATGGATCTTT+AGG - chr2_1:54316547-54316566 Msa0212290:intron 35.0%
CACAAAAGGTTCAGTACAAA+TGG + chr2_1:54316855-54316874 None:intergenic 35.0%
!!! GATAAGTTTTGGACCAATGT+AGG + chr2_1:54317038-54317057 None:intergenic 35.0%
!!! GGAGACTTTTCTTGTTATTG+AGG - chr2_1:54317102-54317121 Msa0212290:intron 35.0%
TTTACTAGCCAAGACTCATA+TGG + chr2_1:54317286-54317305 None:intergenic 35.0%
CGACTTAGATCAATGTGTAA+AGG - chr2_1:54317403-54317422 Msa0212290:intron 35.0%
AGCACTTCATATCATGTTCT+AGG - chr2_1:54317505-54317524 Msa0212290:intron 35.0%
TAACCACATATAGCAAAGGT+AGG + chr2_1:54317534-54317553 None:intergenic 35.0%
TACGTAACCACATATAGCAA+AGG + chr2_1:54317538-54317557 None:intergenic 35.0%
CATTAGTTGTTAAGCCTGTA+AGG + chr2_1:54317735-54317754 None:intergenic 35.0%
! TACACAGAAAGAGTATGATG+GGG + chr2_1:54317784-54317803 None:intergenic 35.0%
! GTTACACAGAAAGAGTATGA+TGG + chr2_1:54317786-54317805 None:intergenic 35.0%
! ATAAGTGTACGATGCAGTTT+TGG - chr2_1:54317880-54317899 Msa0212290:intron 35.0%
! TAAGTGTACGATGCAGTTTT+GGG - chr2_1:54317881-54317900 Msa0212290:intron 35.0%
TTTGGGCATGGAAATATGTT+AGG - chr2_1:54317898-54317917 Msa0212290:intron 35.0%
TTGGGCATGGAAATATGTTA+GGG - chr2_1:54317899-54317918 Msa0212290:intron 35.0%
TAAATTAGAAAGGAGGAACC+TGG - chr2_1:54317989-54318008 Msa0212290:intron 35.0%
!! ACCTGGATTAGTATTACTTG+TGG - chr2_1:54318006-54318025 Msa0212290:intron 35.0%
GTGGCAGTATAGTAATATTC+AGG - chr2_1:54318025-54318044 Msa0212290:intron 35.0%
AAAAGGATGTTTGAGCATCA+TGG - chr2_1:54318056-54318075 Msa0212290:intron 35.0%
TTTGGAGGGAATGAGAAAAA+TGG - chr2_1:54318141-54318160 Msa0212290:intron 35.0%
TAAAAGAATGCAATGGGGAA+GGG + chr2_1:54318283-54318302 None:intergenic 35.0%
!!! AGAGTTTTGAGGATAAAGGA+CGG + chr2_1:54318405-54318424 None:intergenic 35.0%
TTTGGCTATATTTGGGAGTT+TGG + chr2_1:54318442-54318461 None:intergenic 35.0%
GGTCATCTTTGGCTATATTT+GGG + chr2_1:54318449-54318468 None:intergenic 35.0%
AGGTCATCTTTGGCTATATT+TGG + chr2_1:54318450-54318469 None:intergenic 35.0%
TCAAACTATCAGGTCATCTT+TGG + chr2_1:54318460-54318479 None:intergenic 35.0%
! GGAATTTAGTTTCGTGAAAC+AGG - chr2_1:54318544-54318563 Msa0212290:CDS 35.0%
TGAACATTCTTACATCTCAG+AGG - chr2_1:54318580-54318599 Msa0212290:CDS 35.0%
GAACATTCTTACATCTCAGA+GGG - chr2_1:54318581-54318600 Msa0212290:CDS 35.0%
AAAGATCATTGAGACTTGAG+AGG - chr2_1:54318786-54318805 Msa0212290:CDS 35.0%
TGAAAACCAGTAACCAAGAA+AGG - chr2_1:54318827-54318846 Msa0212290:intron 35.0%
ACTACCGAATATACCTTTCT+TGG + chr2_1:54318843-54318862 None:intergenic 35.0%
CATTTATCAGGCTTATGATC+TGG + chr2_1:54319272-54319291 None:intergenic 35.0%
CAGATCATAAGCCTGATAAA+TGG - chr2_1:54319270-54319289 Msa0212290:intron 35.0%
ATTTATTGCAGTGATGTGGT+AGG - chr2_1:54319621-54319640 Msa0212290:intron 35.0%
!! TATATATTGAGCACTGACGT+AGG + chr2_1:54319666-54319685 None:intergenic 35.0%
TATCGTGAACTTATTCCTAC+CGG - chr2_1:54319684-54319703 Msa0212290:intron 35.0%
TTGGCGCCTAAAATTACTTT+AGG + chr2_1:54319771-54319790 None:intergenic 35.0%
! AAAGTAATTTTAGGCGCCAA+AGG - chr2_1:54319771-54319790 Msa0212290:intron 35.0%
! AAGTAATTTTAGGCGCCAAA+GGG - chr2_1:54319772-54319791 Msa0212290:intron 35.0%
CACAAAAATGTAAGTCCCTT+TGG + chr2_1:54319790-54319809 None:intergenic 35.0%
TCCTCAATTCATCTATGTCA+TGG - chr2_1:54319812-54319831 Msa0212290:intron 35.0%
!! TCGTTTAGTTAGGCTTTGTT+TGG - chr2_1:54319982-54320001 Msa0212290:intron 35.0%
!! CGTTTAGTTAGGCTTTGTTT+GGG - chr2_1:54319983-54320002 Msa0212290:intron 35.0%
GTGGAAGAAATAGAAGACAT+TGG - chr2_1:54320059-54320078 Msa0212290:intron 35.0%
AAGAAATAGAAGACATTGGG+AGG - chr2_1:54320063-54320082 Msa0212290:intron 35.0%
TAAAAAATCCCCCTCATTTG+GGG - chr2_1:54320119-54320138 Msa0212290:intron 35.0%
TCTAAGTGAAACAATCAGGT+AGG - chr2_1:54320457-54320476 Msa0212290:intron 35.0%
TTGATCAAAGCCTTCTTAGA+AGG - chr2_1:54320574-54320593 Msa0212290:intron 35.0%
TGTATCATATCAAATTGCGG+CGG + chr2_1:54320635-54320654 None:intergenic 35.0%
TTTAAACCAGTCTTTGGTTG+AGG + chr2_1:54320734-54320753 None:intergenic 35.0%
AGTACAACTCTCTTGATTCA+AGG + chr2_1:54320788-54320807 None:intergenic 35.0%
GTGAGACTAATCAATCAACT+CGG + chr2_1:54320834-54320853 None:intergenic 35.0%
TTGTTCAACAAGAGCAAGAC+AGG - chr2_1:54313201-54313220 Msa0212290:three_prime_UTR 40.0%
ATAACAGTGAATGAGGATGC+TGG - chr2_1:54313284-54313303 Msa0212290:three_prime_UTR 40.0%
!!! CTGGTAGGAACTTGTTTTAC+TGG - chr2_1:54313303-54313322 Msa0212290:three_prime_UTR 40.0%
ATCTCATTGTCCACTCAGTA+GGG + chr2_1:54313589-54313608 None:intergenic 40.0%
AATCTCATTGTCCACTCAGT+AGG + chr2_1:54313590-54313609 None:intergenic 40.0%
!! CTTTATATTGACTCGCCTGT+CGG - chr2_1:54313780-54313799 Msa0212290:intron 40.0%
TATGAAAATCCAACTCCGAC+AGG + chr2_1:54313798-54313817 None:intergenic 40.0%
TCATCTGACATTCGCAACAA+TGG - chr2_1:54313828-54313847 Msa0212290:intron 40.0%
AGGACAGGTAATGTATCACT+TGG - chr2_1:54313858-54313877 Msa0212290:intron 40.0%
!!! CTCGGCTATTGTTTTGAGAT+CGG - chr2_1:54313931-54313950 Msa0212290:intron 40.0%
GTGAAACACCTACCATAAAG+TGG + chr2_1:54314049-54314068 None:intergenic 40.0%
ATCATGAACATAAGCCCAGA+AGG + chr2_1:54314441-54314460 None:intergenic 40.0%
CTGGGCTTATGTTCATGATA+TGG - chr2_1:54314442-54314461 Msa0212290:CDS 40.0%
GGCTTATGTTCATGATATGG+AGG - chr2_1:54314445-54314464 Msa0212290:CDS 40.0%
CTTCTTTAACTAGAGCTCTC+AGG + chr2_1:54314646-54314665 None:intergenic 40.0%
AAATTGCTGATGAGTGTCAC+TGG + chr2_1:54314776-54314795 None:intergenic 40.0%
!! ATGTCTGGCTTCACTTTTGA+AGG + chr2_1:54314981-54315000 None:intergenic 40.0%
TCAAAAGTGAAGCCAGACAT+AGG - chr2_1:54314981-54315000 Msa0212290:intron 40.0%
AACCTCTAAACACCTATGTC+TGG + chr2_1:54314996-54315015 None:intergenic 40.0%
TGTTTAGAGGTTCTCCCTAA+TGG - chr2_1:54315004-54315023 Msa0212290:intron 40.0%
! CCCTAATGGTCTAGTTGTTT+TGG - chr2_1:54315018-54315037 Msa0212290:intron 40.0%
GCTATGCAGGTAAACACAAA+TGG - chr2_1:54315224-54315243 Msa0212290:intron 40.0%
AATATACACTTGTCTGCTGC+AGG - chr2_1:54315483-54315502 Msa0212290:intron 40.0%
TTGATCCGAAATCATACCAC+TGG + chr2_1:54315569-54315588 None:intergenic 40.0%
GAGGGGTAAAGATACTGTAT+GGG + chr2_1:54315699-54315718 None:intergenic 40.0%
TGATTATCATTCGCATGGCA+AGG + chr2_1:54315721-54315740 None:intergenic 40.0%
ATGCAGAATGATAGAGTGCA+TGG - chr2_1:54315962-54315981 Msa0212290:intron 40.0%
TGCAGAATGATAGAGTGCAT+GGG - chr2_1:54315963-54315982 Msa0212290:intron 40.0%
!! GGACTTCTCTGAAATCTTCA+TGG - chr2_1:54316179-54316198 Msa0212290:intron 40.0%
!! AGTTTCTAAAGCTATCGCGA+TGG - chr2_1:54316210-54316229 Msa0212290:intron 40.0%
! GTTTTCAGCATCACAACAGT+TGG - chr2_1:54316259-54316278 Msa0212290:intron 40.0%
! AGAGGTGTGAGTTAGATTCA+GGG + chr2_1:54316437-54316456 None:intergenic 40.0%
! AAGAGGTGTGAGTTAGATTC+AGG + chr2_1:54316438-54316457 None:intergenic 40.0%
! CTCATGTGCCAAGATAGTTT+TGG + chr2_1:54316475-54316494 None:intergenic 40.0%
AGTGAGTGGAATTACAGTGT+CGG + chr2_1:54316682-54316701 None:intergenic 40.0%
! TGTTTTCCCTGTGGCATAAT+CGG - chr2_1:54316709-54316728 Msa0212290:intron 40.0%
! GAATTTTGTCTCATGGTCTC+TGG - chr2_1:54316813-54316832 Msa0212290:intron 40.0%
!! TCAGTACAAATGGTAGTGGA+AGG + chr2_1:54316845-54316864 None:intergenic 40.0%
AGGTTCAGTACAAATGGTAG+TGG + chr2_1:54316849-54316868 None:intergenic 40.0%
! TCTGAAACAGCTAGTTGAGT+TGG - chr2_1:54317081-54317100 Msa0212290:intron 40.0%
!! AGATTCAGATTTTCAGGCAG+AGG + chr2_1:54317228-54317247 None:intergenic 40.0%
! CTTCCTACCTTTGCTATATG+TGG - chr2_1:54317528-54317547 Msa0212290:intron 40.0%
! AAGCGGACCCCTATAATTTT+TGG - chr2_1:54317841-54317860 Msa0212290:intron 40.0%
TCCTAACACAATTCCTGACT+TGG - chr2_1:54317932-54317951 Msa0212290:intron 40.0%
TCCAAGTCAGGAATTGTGTT+AGG + chr2_1:54317936-54317955 None:intergenic 40.0%
GCCACAAGTAATACTAATCC+AGG + chr2_1:54318010-54318029 None:intergenic 40.0%
ATATTCAGGAGAGGGAGAAA+AGG - chr2_1:54318039-54318058 Msa0212290:intron 40.0%
CTAAAAGAATGCAATGGGGA+AGG + chr2_1:54318284-54318303 None:intergenic 40.0%
GGAGCTAAAAGAATGCAATG+GGG + chr2_1:54318288-54318307 None:intergenic 40.0%
GGGAGCTAAAAGAATGCAAT+GGG + chr2_1:54318289-54318308 None:intergenic 40.0%
!!! TTCTTTTAGCTCCCCCATAT+TGG - chr2_1:54318295-54318314 Msa0212290:intron 40.0%
ACTAAAACCCTCCAATATGG+GGG + chr2_1:54318309-54318328 None:intergenic 40.0%
GACTAAAACCCTCCAATATG+GGG + chr2_1:54318310-54318329 None:intergenic 40.0%
GGACTAAAACCCTCCAATAT+GGG + chr2_1:54318311-54318330 None:intergenic 40.0%
TGGACTAAAACCCTCCAATA+TGG + chr2_1:54318312-54318331 None:intergenic 40.0%
!!! AGGGAGAGTTTTGAGGATAA+AGG + chr2_1:54318409-54318428 None:intergenic 40.0%
GCTATATTTGGGAGTTTGGA+GGG + chr2_1:54318438-54318457 None:intergenic 40.0%
GTGGAGATTCACTGGAAAAA+GGG - chr2_1:54318523-54318542 Msa0212290:CDS 40.0%
AGTTGTCTGCCGATATAACA+CGG - chr2_1:54318660-54318679 Msa0212290:intron 40.0%
! GTTTTCATAAAGGGTGAACC+CGG + chr2_1:54318814-54318833 None:intergenic 40.0%
GATTGTTATGGACAGTACGT+AGG + chr2_1:54318979-54318998 None:intergenic 40.0%
TATTCCAGCTACAGATACTG+AGG - chr2_1:54319051-54319070 Msa0212290:intron 40.0%
TGTATACTTCAATCGACCAG+AGG - chr2_1:54319223-54319242 Msa0212290:intron 40.0%
ATCGTGAACTTATTCCTACC+GGG - chr2_1:54319685-54319704 Msa0212290:intron 40.0%
AAATGATATGCGAGTGACAG+TGG + chr2_1:54319744-54319763 None:intergenic 40.0%
GCCATGACATAGATGAATTG+AGG + chr2_1:54319816-54319835 None:intergenic 40.0%
ATTCATCTATGTCATGGCAG+TGG - chr2_1:54319818-54319837 Msa0212290:intron 40.0%
AATAGCGAGTAGATGCTACT+GGG + chr2_1:54319862-54319881 None:intergenic 40.0%
!! TGGAAGCTTGAGAGCATTTA+TGG + chr2_1:54319885-54319904 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - chr2_1:54319990-54320009 Msa0212290:intron 40.0%
AAAAAATCCCCCTCATTTGG+GGG - chr2_1:54320120-54320139 Msa0212290:intron 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG + chr2_1:54320132-54320151 None:intergenic 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG + chr2_1:54320133-54320152 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG + chr2_1:54320375-54320394 None:intergenic 40.0%
AAGTGAAACAATCAGGTAGG+AGG - chr2_1:54320460-54320479 Msa0212290:intron 40.0%
GACTCACGTTTGTCAATGTA+CGG - chr2_1:54320503-54320522 Msa0212290:intron 40.0%
ACTCACGTTTGTCAATGTAC+GGG - chr2_1:54320504-54320523 Msa0212290:intron 40.0%
CAACAAGAGCAAGACAGGAT+TGG - chr2_1:54313206-54313225 Msa0212290:three_prime_UTR 45.0%
TTATGGCTTAATGGTGGTCC+TGG - chr2_1:54313371-54313390 Msa0212290:three_prime_UTR 45.0%
TTCGCAACAATGGCGATAAG+AGG - chr2_1:54313838-54313857 Msa0212290:intron 45.0%
AACAATGGCGATAAGAGGAC+AGG - chr2_1:54313843-54313862 Msa0212290:intron 45.0%
ACCTGAGTGAGAGAATCCTT+TGG + chr2_1:54314110-54314129 None:intergenic 45.0%
!! TCTCTCACTCAGGTCTTGTT+TGG - chr2_1:54314116-54314135 Msa0212290:intron 45.0%
! TTTGGGATGAGTTCTCCTTC+TGG - chr2_1:54314423-54314442 Msa0212290:CDS 45.0%
TTGGGATGAGTTCTCCTTCT+GGG - chr2_1:54314424-54314443 Msa0212290:CDS 45.0%
! ATGGAGGGTTCTAACTAACG+AGG - chr2_1:54314461-54314480 Msa0212290:CDS 45.0%
!! TCTGGCTTCACTTTTGAAGG+AGG + chr2_1:54314978-54314997 None:intergenic 45.0%
AGCCAGACATAGGTGTTTAG+AGG - chr2_1:54314991-54315010 Msa0212290:intron 45.0%
AAGCGTTATGGAAGCCCTAA+AGG + chr2_1:54315053-54315072 None:intergenic 45.0%
TGGGGATGTTCCAGTTTATG+TGG - chr2_1:54315542-54315561 Msa0212290:intron 45.0%
TTCCAGTTTATGTGGTCCAG+TGG - chr2_1:54315550-54315569 Msa0212290:intron 45.0%
TACCACTGGACCACATAAAC+TGG + chr2_1:54315555-54315574 None:intergenic 45.0%
GTGGTCCAGTGGTATGATTT+CGG - chr2_1:54315561-54315580 Msa0212290:intron 45.0%
! GAATCTGATGGGTGTTCAAC+TGG + chr2_1:54315628-54315647 None:intergenic 45.0%
GGAGGGGTAAAGATACTGTA+TGG + chr2_1:54315700-54315719 None:intergenic 45.0%
TATCATTCGCATGGCAAGGA+GGG + chr2_1:54315717-54315736 None:intergenic 45.0%
TTATCATTCGCATGGCAAGG+AGG + chr2_1:54315718-54315737 None:intergenic 45.0%
CCAGCTGATTATCATTCGCA+TGG + chr2_1:54315726-54315745 None:intergenic 45.0%
CCATGCGAATGATAATCAGC+TGG - chr2_1:54315723-54315742 Msa0212290:intron 45.0%
TGTACTGCACCATCACAAAC+AGG + chr2_1:54315842-54315861 None:intergenic 45.0%
!! GAAGGAGCACTCCATTTATC+TGG + chr2_1:54315928-54315947 None:intergenic 45.0%
AACTCACACCTCTTCGTCTA+TGG - chr2_1:54316444-54316463 Msa0212290:intron 45.0%
TGGAATAGCCATAGACGAAG+AGG + chr2_1:54316455-54316474 None:intergenic 45.0%
! GAACTAGCATTTTGAACCCG+AGG + chr2_1:54316504-54316523 None:intergenic 45.0%
TGAGTGGAATTACAGTGTCG+GGG + chr2_1:54316680-54316699 None:intergenic 45.0%
GTGAGTGGAATTACAGTGTC+GGG + chr2_1:54316681-54316700 None:intergenic 45.0%
GAAAACAGAGTGGAAGTGAG+TGG + chr2_1:54316696-54316715 None:intergenic 45.0%
CATGACTTCCTCTCCTACAT+TGG - chr2_1:54317022-54317041 Msa0212290:intron 45.0%
!! GTTTTGGACCAATGTAGGAG+AGG + chr2_1:54317033-54317052 None:intergenic 45.0%
TCTACGCCACATGACTGAAA+TGG - chr2_1:54317179-54317198 Msa0212290:intron 45.0%
CAGAAGCCATTTCAGTCATG+TGG + chr2_1:54317188-54317207 None:intergenic 45.0%
GAGTCTTGGCTAGTAAACCT+TGG - chr2_1:54317289-54317308 Msa0212290:intron 45.0%
! AGTTTGGGACAGAAGGAGTT+TGG - chr2_1:54317320-54317339 Msa0212290:intron 45.0%
TTGAATCCTGGAAGCAGAAC+CGG - chr2_1:54317353-54317372 Msa0212290:intron 45.0%
ATGCAAACAAGGTCCAAGTC+AGG + chr2_1:54317948-54317967 None:intergenic 45.0%
! TGGACCTTGTTTGCATTCGA+TGG - chr2_1:54317952-54317971 Msa0212290:intron 45.0%
CTGTCCATCGAATGCAAACA+AGG + chr2_1:54317959-54317978 None:intergenic 45.0%
TTGCATTCGATGGACAGCTA+TGG - chr2_1:54317962-54317981 Msa0212290:intron 45.0%
GTTTGAGCATCATGGTGCAT+AGG - chr2_1:54318064-54318083 Msa0212290:intron 45.0%
! AATGCAATGGGGAAGGGTTT+TGG + chr2_1:54318277-54318296 None:intergenic 45.0%
GGGGAGCTAAAAGAATGCAA+TGG + chr2_1:54318290-54318309 None:intergenic 45.0%
!!! TTTTAGCTCCCCCATATTGG+AGG - chr2_1:54318298-54318317 Msa0212290:intron 45.0%
! TTTAGCTCCCCCATATTGGA+GGG - chr2_1:54318299-54318318 Msa0212290:intron 45.0%
TTTGGGAGTTTGGAGGGAAA+GGG + chr2_1:54318432-54318451 None:intergenic 45.0%
ATTTGGGAGTTTGGAGGGAA+AGG + chr2_1:54318433-54318452 None:intergenic 45.0%
GGCTATATTTGGGAGTTTGG+AGG + chr2_1:54318439-54318458 None:intergenic 45.0%
CTGAAGGTTGCAACTAATGC+AGG - chr2_1:54318501-54318520 Msa0212290:CDS 45.0%
AAGGTTGCAACTAATGCAGG+TGG - chr2_1:54318504-54318523 Msa0212290:CDS 45.0%
TAATGCAGGTGGAGATTCAC+TGG - chr2_1:54318515-54318534 Msa0212290:CDS 45.0%
GGTGGAGATTCACTGGAAAA+AGG - chr2_1:54318522-54318541 Msa0212290:CDS 45.0%
TCGGCAGACAACTGAAATGT+TGG + chr2_1:54318653-54318672 None:intergenic 45.0%
ACCCTGCAACCGTGTTATAT+CGG + chr2_1:54318672-54318691 None:intergenic 45.0%
CATTGAGACTTGAGAGGATC+CGG - chr2_1:54318792-54318811 Msa0212290:CDS 45.0%
ATTGAGACTTGAGAGGATCC+GGG - chr2_1:54318793-54318812 Msa0212290:CDS 45.0%
TATGCCTCAGTATCTGTAGC+TGG + chr2_1:54319058-54319077 None:intergenic 45.0%
ATGCTGTGTTTCTCTGTGCA+AGG + chr2_1:54319203-54319222 None:intergenic 45.0%
GATCAACATGTAGAGCCCTT+TGG + chr2_1:54319250-54319269 None:intergenic 45.0%
GTGATGTGGTAGGTACTAAC+TGG - chr2_1:54319631-54319650 Msa0212290:intron 45.0%
TGTGGTAGGTACTAACTGGA+AGG - chr2_1:54319635-54319654 Msa0212290:intron 45.0%
GAATATCCATATTCGCAGCC+CGG + chr2_1:54319706-54319725 None:intergenic 45.0%
GGCTGCGAATATGGATATTC+AGG - chr2_1:54319706-54319725 Msa0212290:intron 45.0%
GAATAGCGAGTAGATGCTAC+TGG + chr2_1:54319863-54319882 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr2_1:54319994-54320013 Msa0212290:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr2_1:54319995-54320014 Msa0212290:intron 45.0%
!!! GGAGGGTTTTGGAAAAAGGA+AGG - chr2_1:54320031-54320050 Msa0212290:intron 45.0%
TGGAAAAAGGAAGGAGCAAG+TGG - chr2_1:54320040-54320059 Msa0212290:intron 45.0%
ATAGAAGACATTGGGAGGAG+AGG - chr2_1:54320068-54320087 Msa0212290:intron 45.0%
TAGAAGACATTGGGAGGAGA+GGG - chr2_1:54320069-54320088 Msa0212290:intron 45.0%
! TTTGAGTTCCCCCAAATGAG+GGG + chr2_1:54320131-54320150 None:intergenic 45.0%
ATTGTATTGAGGGATTGGGG+AGG - chr2_1:54320153-54320172 Msa0212290:intron 45.0%
TTGTATTGAGGGATTGGGGA+GGG - chr2_1:54320154-54320173 Msa0212290:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr2_1:54319995-54320014 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr2_1:54319994-54320013 None:intergenic 45.0%
GAAACAATCAGGTAGGAGGA+TGG - chr2_1:54320464-54320483 Msa0212290:intron 45.0%
CTCACGTTTGTCAATGTACG+GGG - chr2_1:54320505-54320524 Msa0212290:intron 45.0%
!! GCAAGTTTTGGTCTATGCAG+AGG + chr2_1:54320547-54320566 None:intergenic 45.0%
! CATGGAGGTTCCTTCTAAGA+AGG + chr2_1:54320587-54320606 None:intergenic 45.0%
GTTGTTCCTCAACCAAAGAC+TGG - chr2_1:54320725-54320744 Msa0212290:CDS 45.0%
!!! TAATTTATTTTCAAATTAAT+AGG + chr2_1:54318918-54318937 None:intergenic 5.0%
CAGTGAATGAGGATGCTGGT+AGG - chr2_1:54313288-54313307 Msa0212290:three_prime_UTR 50.0%
TTCAATTGGGCCCTACTGAG+TGG - chr2_1:54313576-54313595 Msa0212290:CDS 50.0%
GCCAAAGGATTCTCTCACTC+AGG - chr2_1:54314106-54314125 Msa0212290:intron 50.0%
! TGATGAGTGTCACTGGCCAT+CGG + chr2_1:54314769-54314788 None:intergenic 50.0%
ATCAGTGGTGAGAGCTATGC+AGG - chr2_1:54315211-54315230 Msa0212290:intron 50.0%
TACACTTGTCTGCTGCAGGT+AGG - chr2_1:54315487-54315506 Msa0212290:intron 50.0%
ATCATTCGCATGGCAAGGAG+GGG + chr2_1:54315716-54315735 None:intergenic 50.0%
! TGGCACATGAGAGTGTACCT+CGG - chr2_1:54316484-54316503 Msa0212290:intron 50.0%
! GAGTGGAATTACAGTGTCGG+GGG + chr2_1:54316679-54316698 None:intergenic 50.0%
! CTTCCACTCTGTTTTCCCTG+TGG - chr2_1:54316700-54316719 Msa0212290:intron 50.0%
ATGCCACAGGGAAAACAGAG+TGG + chr2_1:54316706-54316725 None:intergenic 50.0%
ACTGAAATGGCTTCTGCCAC+AGG - chr2_1:54317192-54317211 Msa0212290:intron 50.0%
CAGAGGAATTGAGATGCCTG+TGG + chr2_1:54317211-54317230 None:intergenic 50.0%
AGAGTTCGGAATTCGGCTGT+AGG - chr2_1:54317569-54317588 Msa0212290:intron 50.0%
! CTGTAGGTGCAGCTTTAGCA+CGG - chr2_1:54317585-54317604 Msa0212290:intron 50.0%
GTGCACTGTAACAGCCTTAC+AGG - chr2_1:54317718-54317737 Msa0212290:intron 50.0%
TTCTGTGTAACGGTCCTCCT+AGG - chr2_1:54317795-54317814 Msa0212290:intron 50.0%
GGCCTAGGCATGCTTAAAAG+CGG - chr2_1:54317824-54317843 Msa0212290:intron 50.0%
!! GTCCGCTTTTAAGCATGCCT+AGG + chr2_1:54317829-54317848 None:intergenic 50.0%
!!! GTACGATGCAGTTTTGGGCA+TGG - chr2_1:54317886-54317905 Msa0212290:intron 50.0%
CATCATGGTGCATAGGTGCA+GGG - chr2_1:54318071-54318090 Msa0212290:intron 50.0%
TGCAGTAAGAGGGGAAGAGA+GGG - chr2_1:54318112-54318131 Msa0212290:intron 50.0%
! GAAAGGGAGGGAGAGTTTTG+AGG + chr2_1:54318416-54318435 None:intergenic 50.0%
ACCAAGTGGGAGAACTCTGA+AGG - chr2_1:54318485-54318504 Msa0212290:CDS 50.0%
ACCTTCAGAGTTCTCCCACT+TGG + chr2_1:54318489-54318508 None:intergenic 50.0%
CTGAAATGTTGGCAGCGTGA+CGG + chr2_1:54318642-54318661 None:intergenic 50.0%
TGCCGATATAACACGGTTGC+AGG - chr2_1:54318667-54318686 Msa0212290:intron 50.0%
GCCGATATAACACGGTTGCA+GGG - chr2_1:54318668-54318687 Msa0212290:intron 50.0%
TCAATCGACCAGAGGTCCAA+AGG - chr2_1:54319231-54319250 Msa0212290:intron 50.0%
CAATCGACCAGAGGTCCAAA+GGG - chr2_1:54319232-54319251 Msa0212290:intron 50.0%
! CTGCAGGTCTGCCATTTATC+AGG + chr2_1:54319284-54319303 None:intergenic 50.0%
CTGATAAATGGCAGACCTGC+AGG - chr2_1:54319282-54319301 Msa0212290:intron 50.0%
AAATGGCAGACCTGCAGGTA+AGG - chr2_1:54319287-54319306 Msa0212290:intron 50.0%
!! CTGTTTTGAGCCTTACCTGC+AGG + chr2_1:54319300-54319319 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr2_1:54319993-54320012 Msa0212290:intron 50.0%
!!! GAGGGGAGGGTTTTGGAAAA+AGG - chr2_1:54320027-54320046 Msa0212290:intron 50.0%
TTGAGTTCCCCCAAATGAGG+GGG + chr2_1:54320130-54320149 None:intergenic 50.0%
! AAGGGAGGGGAAGGTTTTTG+GGG + chr2_1:54320347-54320366 None:intergenic 50.0%
! GAAGGGAGGGGAAGGTTTTT+GGG + chr2_1:54320348-54320367 None:intergenic 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG + chr2_1:54320365-54320384 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr2_1:54319993-54320012 None:intergenic 50.0%
GGATGGACCCAAGAATACGA+CGG - chr2_1:54320481-54320500 Msa0212290:intron 50.0%
CGTGAGTCCGTCGTATTCTT+GGG + chr2_1:54320491-54320510 None:intergenic 50.0%
ACGTGAGTCCGTCGTATTCT+TGG + chr2_1:54320492-54320511 None:intergenic 50.0%
TTTGTCAATGTACGGGGTGC+AGG - chr2_1:54320511-54320530 Msa0212290:intron 50.0%
TTGTCAATGTACGGGGTGCA+GGG - chr2_1:54320512-54320531 Msa0212290:intron 50.0%
TGGTTCAAGAGTTGGCATGG+AGG + chr2_1:54320602-54320621 None:intergenic 50.0%
AGTGTGCGTGGTTCAAGAGT+TGG + chr2_1:54320610-54320629 None:intergenic 50.0%
! AGGATTGGCATAGCACTCCC+AGG - chr2_1:54313221-54313240 Msa0212290:three_prime_UTR 55.0%
!! ATTGACTCGCCTGTCGGAGT+TGG - chr2_1:54313786-54313805 Msa0212290:intron 55.0%
! GGCACATGAGAGTGTACCTC+GGG - chr2_1:54316485-54316504 Msa0212290:intron 55.0%
! GAATTACAGTGTCGGGGGCA+AGG + chr2_1:54316674-54316693 None:intergenic 55.0%
TCCCTGTGGCATAATCGGTG+AGG - chr2_1:54316714-54316733 Msa0212290:intron 55.0%
! GCCTCACCGATTATGCCACA+GGG + chr2_1:54316718-54316737 None:intergenic 55.0%
!! TTACTGCCGGTTCTGCTTCC+AGG + chr2_1:54317362-54317381 None:intergenic 55.0%
TGTGTAACGGTCCTCCTAGG+AGG - chr2_1:54317798-54317817 Msa0212290:intron 55.0%
TAACGGTCCTCCTAGGAGGA+AGG - chr2_1:54317802-54317821 Msa0212290:intron 55.0%
AACGGTCCTCCTAGGAGGAA+GGG - chr2_1:54317803-54317822 Msa0212290:intron 55.0%
GCATCATGGTGCATAGGTGC+AGG - chr2_1:54318070-54318089 Msa0212290:intron 55.0%
GTGCAGTAAGAGGGGAAGAG+AGG - chr2_1:54318111-54318130 Msa0212290:intron 55.0%
GCAGTAAGAGGGGAAGAGAG+GGG - chr2_1:54318113-54318132 Msa0212290:intron 55.0%
AAGAGAGGGGAGGACTTTGG+AGG - chr2_1:54318126-54318145 Msa0212290:intron 55.0%
AGAGAGGGGAGGACTTTGGA+GGG - chr2_1:54318127-54318146 Msa0212290:intron 55.0%
GGAGTTTGGAGGGAAAGGGA+GGG + chr2_1:54318428-54318447 None:intergenic 55.0%
TGTAGAGCCCTTTGGACCTC+TGG + chr2_1:54319242-54319261 None:intergenic 55.0%
TTCCTACCGGGCTGCGAATA+TGG - chr2_1:54319697-54319716 Msa0212290:intron 55.0%
ATCCATATTCGCAGCCCGGT+AGG + chr2_1:54319702-54319721 None:intergenic 55.0%
CATCATACCATGCACGCCAG+GGG + chr2_1:54319916-54319935 None:intergenic 55.0%
CCATCATACCATGCACGCCA+GGG + chr2_1:54319917-54319936 None:intergenic 55.0%
ACCATCATACCATGCACGCC+AGG + chr2_1:54319918-54319937 None:intergenic 55.0%
TGGCGTGCATGGTATGATGG+TGG - chr2_1:54319917-54319936 Msa0212290:intron 55.0%
GGCGTGCATGGTATGATGGT+GGG - chr2_1:54319918-54319937 Msa0212290:intron 55.0%
! GCGTGCATGGTATGATGGTG+GGG - chr2_1:54319919-54319938 Msa0212290:intron 55.0%
!! TGCATGGTATGATGGTGGGG+AGG - chr2_1:54319922-54319941 Msa0212290:intron 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr2_1:54319998-54320017 Msa0212290:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr2_1:54319999-54320018 Msa0212290:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - chr2_1:54320000-54320019 Msa0212290:intron 55.0%
ACATTGGGAGGAGAGGGCTT+TGG - chr2_1:54320075-54320094 Msa0212290:intron 55.0%
TATTGAGGGATTGGGGAGGG+TGG - chr2_1:54320157-54320176 Msa0212290:intron 55.0%
ATTGAGGGATTGGGGAGGGT+GGG - chr2_1:54320158-54320177 Msa0212290:intron 55.0%
!! AGGGGAAGGTTTTTGGGGGT+TGG + chr2_1:54320342-54320361 None:intergenic 55.0%
!! AGGGAGGGGAAGGTTTTTGG+GGG + chr2_1:54320346-54320365 None:intergenic 55.0%
! GGAAGGGAGGGGAAGGTTTT+TGG + chr2_1:54320349-54320368 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG + chr2_1:54319999-54320018 None:intergenic 55.0%
GCGTGGTTCAAGAGTTGGCA+TGG + chr2_1:54320605-54320624 None:intergenic 55.0%
! TACAGTGTCGGGGGCAAGGT+GGG + chr2_1:54316670-54316689 None:intergenic 60.0%
! TTACAGTGTCGGGGGCAAGG+TGG + chr2_1:54316671-54316690 None:intergenic 60.0%
! GGCCTCACCGATTATGCCAC+AGG + chr2_1:54316719-54316738 None:intergenic 60.0%
ATGCCTAGGCCCTTCCTCCT+AGG + chr2_1:54317815-54317834 None:intergenic 60.0%
GGTGCATAGGTGCAGGGTGA+AGG - chr2_1:54318077-54318096 Msa0212290:intron 60.0%
GTAAGAGGGGAAGAGAGGGG+AGG - chr2_1:54318116-54318135 Msa0212290:intron 60.0%
GGGAAGAGAGGGGAGGACTT+TGG - chr2_1:54318123-54318142 Msa0212290:intron 60.0%
GGGAGTTTGGAGGGAAAGGG+AGG + chr2_1:54318429-54318448 None:intergenic 60.0%
GGAGCAACAGATCCAGCAGG+TGG + chr2_1:54318621-54318640 None:intergenic 60.0%
GACGGAGCAACAGATCCAGC+AGG + chr2_1:54318624-54318643 None:intergenic 60.0%
AGCTTCCAACTGTGAGCCCC+TGG - chr2_1:54319897-54319916 Msa0212290:intron 60.0%
CCCTGGCGTGCATGGTATGA+TGG - chr2_1:54319914-54319933 Msa0212290:intron 60.0%
! TTGGGAGGAGAGGGCTTTGG+AGG - chr2_1:54320078-54320097 Msa0212290:intron 60.0%
TTGAGGGATTGGGGAGGGTG+GGG - chr2_1:54320159-54320178 Msa0212290:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG + chr2_1:54320360-54320379 None:intergenic 60.0%
GGAGTTTGGAGGGGAAGGGA+GGG + chr2_1:54320361-54320380 None:intergenic 60.0%
CCTAGGCCCTTCCTCCTAGG+AGG + chr2_1:54317812-54317831 None:intergenic 65.0%
CCTCCTAGGAGGAAGGGCCT+AGG - chr2_1:54317809-54317828 Msa0212290:intron 65.0%
AGCAGGTGGCAGCAGCTGTG+CGG + chr2_1:54318607-54318626 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG - chr2_1:54320004-54320023 Msa0212290:intron 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG - chr2_1:54320005-54320024 Msa0212290:intron 65.0%
TGAGGGATTGGGGAGGGTGG+GGG - chr2_1:54320160-54320179 Msa0212290:intron 65.0%
TTGGGGAGGGTGGGGGGTTA+TGG - chr2_1:54320167-54320186 Msa0212290:intron 65.0%
GGAGGGTGGGGGGTTATGGA+GGG - chr2_1:54320171-54320190 Msa0212290:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+AGG + chr2_1:54320356-54320375 None:intergenic 65.0%
GGGAGTTTGGAGGGGAAGGG+AGG + chr2_1:54320362-54320381 None:intergenic 65.0%
ATTGCGGCGGTGAGTGTGCG+TGG + chr2_1:54320622-54320641 None:intergenic 65.0%
GTGTCGGGGGCAAGGTGGGA+AGG + chr2_1:54316666-54316685 None:intergenic 70.0%
GCACAGCTGCTGCCACCTGC+TGG - chr2_1:54318606-54318625 Msa0212290:CDS 70.0%
GCACGCCAGGGGCTCACAGT+TGG + chr2_1:54319905-54319924 None:intergenic 70.0%
CTGTGAGCCCCTGGCGTGCA+TGG - chr2_1:54319906-54319925 Msa0212290:intron 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG - chr2_1:54320003-54320022 Msa0212290:intron 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG - chr2_1:54320008-54320027 Msa0212290:intron 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG - chr2_1:54320009-54320028 Msa0212290:intron 70.0%
! GGGAGGGGAGGGGAGGGTTT+TGG - chr2_1:54320020-54320039 Msa0212290:intron 70.0%
GAGGGATTGGGGAGGGTGGG+GGG - chr2_1:54320161-54320180 Msa0212290:intron 70.0%
GGGAGGGTGGGGGGTTATGG+AGG - chr2_1:54320170-54320189 Msa0212290:intron 70.0%
TGGAGGGGAGGGGAGGGGAG+GGG - chr2_1:54320010-54320029 Msa0212290:intron 75.0%
! AGGGGAGGGGAGGGGAGGGG+AGG - chr2_1:54320013-54320032 Msa0212290:intron 80.0%
! GGGGAGGGGAGGGGAGGGGA+GGG - chr2_1:54320014-54320033 Msa0212290:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 54313110 54321026 54313110 ID=Msa0212290;Name=Msa0212290
chr2_1 mRNA 54313110 54321026 54313110 ID=Msa0212290-mRNA-1;Parent=Msa0212290;Name=Msa0212290-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0.55|0.5|1|0.66|0.6|10|381|422
chr2_1 exon 54313110 54313661 54313110 ID=Msa0212290-mRNA-1:exon:15077;Parent=Msa0212290-mRNA-1
chr2_1 exon 54314229 54314298 54314229 ID=Msa0212290-mRNA-1:exon:15076;Parent=Msa0212290-mRNA-1
chr2_1 exon 54314409 54314504 54314409 ID=Msa0212290-mRNA-1:exon:15075;Parent=Msa0212290-mRNA-1
chr2_1 exon 54314833 54314966 54314833 ID=Msa0212290-mRNA-1:exon:15074;Parent=Msa0212290-mRNA-1
chr2_1 exon 54318377 54318441 54318377 ID=Msa0212290-mRNA-1:exon:15073;Parent=Msa0212290-mRNA-1
chr2_1 exon 54318451 54318631 54318451 ID=Msa0212290-mRNA-1:exon:15072;Parent=Msa0212290-mRNA-1
chr2_1 exon 54318740 54318825 54318740 ID=Msa0212290-mRNA-1:exon:15071;Parent=Msa0212290-mRNA-1
chr2_1 exon 54318904 54318996 54318904 ID=Msa0212290-mRNA-1:exon:15070;Parent=Msa0212290-mRNA-1
chr2_1 exon 54320642 54320845 54320642 ID=Msa0212290-mRNA-1:exon:15069;Parent=Msa0212290-mRNA-1
chr2_1 exon 54320858 54321026 54320858 ID=Msa0212290-mRNA-1:exon:15068;Parent=Msa0212290-mRNA-1
chr2_1 CDS 54320858 54321026 54320858 ID=Msa0212290-mRNA-1:cds;Parent=Msa0212290-mRNA-1
chr2_1 CDS 54320642 54320845 54320642 ID=Msa0212290-mRNA-1:cds;Parent=Msa0212290-mRNA-1
chr2_1 CDS 54318904 54318996 54318904 ID=Msa0212290-mRNA-1:cds;Parent=Msa0212290-mRNA-1
chr2_1 CDS 54318740 54318825 54318740 ID=Msa0212290-mRNA-1:cds;Parent=Msa0212290-mRNA-1
chr2_1 CDS 54318451 54318631 54318451 ID=Msa0212290-mRNA-1:cds;Parent=Msa0212290-mRNA-1
chr2_1 CDS 54318377 54318441 54318377 ID=Msa0212290-mRNA-1:cds;Parent=Msa0212290-mRNA-1
chr2_1 CDS 54314833 54314966 54314833 ID=Msa0212290-mRNA-1:cds;Parent=Msa0212290-mRNA-1
chr2_1 CDS 54314409 54314504 54314409 ID=Msa0212290-mRNA-1:cds;Parent=Msa0212290-mRNA-1
chr2_1 CDS 54314229 54314298 54314229 ID=Msa0212290-mRNA-1:cds;Parent=Msa0212290-mRNA-1
chr2_1 CDS 54313491 54313661 54313491 ID=Msa0212290-mRNA-1:cds;Parent=Msa0212290-mRNA-1
chr2_1 three_prime_UTR 54313110 54313490 54313110 ID=Msa0212290-mRNA-1:three_prime_utr;Parent=Msa0212290-mRNA-1
Gene Sequence

>Msa0212290

ATGGCCAATTTTGACTGGTCTCAAATTTTCGCCATAACATTGGCAACTCTTTTCCTATGCAACAACAATTTCACATATGCAACAGACCCATTTGTTCAACAAGAGCAAGACAGGATTGGCATAGCACTCCCAGGTCAAAACTTCAATATCAGTTTTGAACACTATTCTGTGAATGAGGATGCTGGTAGGAACTTGTTTTACTGGTTCATTCAAGCTGATCATGTAGATCCTACTTCAAAGCCACTTCTTTTATGGCTTAATGGTGGTCCTGGTTGTTCTTCTATTGCTTTTGGTGAAGCTGAAGAAATTGGTCCTTTCCATATTAATTCTGATGCTAAAACCCTCTATCTTAATCCATATTCTTGGAATCAAGCTGAGGAAAATCTCATATTTCTATTGAAGTGGTTTGAGCGTTTTCCCCAGTATAAAAACACAGACTTTTTCATCAGTGGTGAGAGCTATGCAGGACATTATGTTCCGCAACTTAGCCAAGTTATTGTCAAGTACAACTCAAATACAAAACAAGATTCTATAAATCTCAAAGGGTACATGGTAGGAAATGCTCTAACAGATGATTTCAGTGATCAATTGGGGATGTTCCAGTTTATGTGGTCCAGTGGTATGATTTCGGATCAAACATTCAAGCTCCTGAATCTGCTATGTGATTTTCAGCCAGTTGAACACCCATCAGATTCATGTAACAAAATCTGGGAAATTGCCTATGAAGAAATGGACCCATACAGTATCTTTACCCCTCCTTGCCATGCGAATGATAATCAGCTGGATAAAAGAAAGCATAGTTTTGGAAGACTCAGAAGTGCGTATGATCCTTGCACAGAGAAACACAGCATTGTATACTTCAATCGACCAGAGGTCCAAAGGGCTCTACATGTTGATCCAGATCATAAGCCTGATAAATGGCAGACCTGCAGTGATGTGGTAGGTACTAACTGGAAGGATTCACCTACGTCAGTGCTCAATATATATCGTGAACTTATTCCTACCGGGCTGCGAATATGGATATTCAGTGGTAATACTGATGCTGTAATCCCAGTAGCATCTACTCGCTATTCCATAAATGCTCTCAAGCTTCCAACTGTAGGAGGATGGACCCAAGAATACGACGGACTCACGTTTGTCAATGTACGGGGTGCAGGGCACGAAGTTCCTCTGCATAGACCAAAACTTGCTCTAACATTGATCAAAGCCTTCTTAGAAGGAACCTCCATGCCAACTCTTGAACCACGCACACTCACCGCCGCAATTTGA
Protein sequence

>Msa0212290

MANFDWSQIFAITLATLFLCNNNFTYATDPFVQQEQDRIGIALPGQNFNISFEHYSVNEDAGRNLFYWFIQADHVDPTSKPLLLWLNGGPGCSSIAFGEAEEIGPFHINSDAKTLYLNPYSWNQAEENLIFLLKWFERFPQYKNTDFFISGESYAGHYVPQLSQVIVKYNSNTKQDSINLKGYMVGNALTDDFSDQLGMFQFMWSSGMISDQTFKLLNLLCDFQPVEHPSDSCNKIWEIAYEEMDPYSIFTPPCHANDNQLDKRKHSFGRLRSAYDPCTEKHSIVYFNRPEVQRALHVDPDHKPDKWQTCSDVVGTNWKDSPTSVLNIYRELIPTGLRIWIFSGNTDAVIPVASTRYSINALKLPTVGGWTQEYDGLTFVNVRGAGHEVPLHRPKLALTLIKAFLEGTSMPTLEPRTLTAAI*