AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0578400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0578400 MtrunA17_Chr8g0381911 95.370 324 7 2 14 335 1 318 0.0 636
Msa0578400 MtrunA17_Chr3g0116461 41.304 230 119 5 85 313 83 297 7.62e-52 174
Msa0578400 MtrunA17_Chr7g0271811 24.848 330 193 12 26 335 3 297 5.45e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0578400 AT4G39970.1 72.664 289 74 1 46 334 32 315 9.50e-159 447
Msa0578400 AT3G48420.1 39.700 267 141 6 52 313 42 293 2.73e-54 181
Msa0578400 AT1G56500.2 29.032 248 135 9 84 324 76 289 1.07e-16 81.6
Msa0578400 AT1G56500.1 29.032 248 135 9 84 324 76 289 1.68e-16 81.3
Msa0578400 AT2G38740.1 26.809 235 139 8 70 302 10 213 5.09e-12 65.5

Find 81 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTCTTGAAAACCTTAT+TGG 0.118722 4_1:-82945705 Msa0578400:CDS
AGAAAGGAACCATCGCATTT+TGG 0.209442 4_1:+82947993 None:intergenic
CTCTCATGAATTTACTTTCA+TGG 0.234375 4_1:-82943873 Msa0578400:three_prime_UTR
GGATAGTGTTATTGGTTTAC+AGG 0.248290 4_1:-82945241 Msa0578400:intron
GTGGTAGAGGATAGTGTTAT+TGG 0.306177 4_1:-82945249 Msa0578400:CDS
CAAGTTGATTGACACTCTTC+AGG 0.315114 4_1:-82947784 Msa0578400:intron
AAAGAAAGTAACTTAATTGT+TGG 0.318877 4_1:+82948279 None:intergenic
GATCAACTTCAGAACCAAAT+TGG 0.329933 4_1:-82948027 Msa0578400:CDS
CTTCTCCTCAACCACTCAAC+TGG 0.334806 4_1:-82948065 Msa0578400:CDS
TTTATGCAGCTTGAAAGATT+TGG 0.334851 4_1:-82944144 Msa0578400:intron
TGGGTTTGCCACCACCAATT+TGG 0.338447 4_1:+82948013 None:intergenic
AGAAGACGCGGTGGTTATTA+CGG 0.344000 4_1:+82948244 None:intergenic
TATTATTAGTTACCTTGAAT+TGG 0.347791 4_1:-82944057 Msa0578400:three_prime_UTR
GTAGGCTTACAATTCCAATA+AGG 0.351543 4_1:+82945691 None:intergenic
AGCCTTGATTGCTTCCTTGC+TGG 0.357422 4_1:-82945576 Msa0578400:intron
ACGAAAACAGTGTCTGGTTT+GGG 0.389149 4_1:+82948305 None:intergenic
TTCATTGCAAAATGTAATAA+AGG 0.395463 4_1:-82943925 Msa0578400:three_prime_UTR
TACCTTACGTTACTCAAGTC+AGG 0.404434 4_1:+82944244 None:intergenic
AACGAAAACAGTGTCTGGTT+TGG 0.405544 4_1:+82948304 None:intergenic
AATATATGTGACTGCTTCCC+AGG 0.410556 4_1:-82945400 Msa0578400:intron
TACTCACATAAACCAATTCA+AGG 0.419100 4_1:+82944045 None:intergenic
AATTTCAAAACTCCTGGTCT+AGG 0.433116 4_1:+82945941 None:intergenic
GTGTCTGGTTTGGGAGAGAT+AGG 0.433632 4_1:+82948314 None:intergenic
AAATAATCGTACAGCATCTC+TGG 0.438342 4_1:+82945907 None:intergenic
TGATGAAGATGAATGGTAAA+TGG 0.439886 4_1:-82948404 Msa0578400:CDS
ATCTGAGCACTTACATCGTC+AGG 0.441291 4_1:-82948133 Msa0578400:CDS
TCCATCAATTTCAAAACTCC+TGG 0.446507 4_1:+82945935 None:intergenic
TACAAAGATATAATCAAGTC+TGG 0.450516 4_1:-82946082 Msa0578400:CDS
TGGATAACGAAAACAGTGTC+TGG 0.452538 4_1:+82948299 None:intergenic
GGAGAGATAGGAATGGGAAG+TGG 0.465100 4_1:+82948326 None:intergenic
CTGAAGAGTGTCAATCAACT+TGG 0.465240 4_1:+82947785 None:intergenic
CACATCTTCCACCGCTGAGC+AGG 0.465541 4_1:-82944406 Msa0578400:intron
ATATCCCAGTTGAGTGGTTG+AGG 0.470059 4_1:+82948060 None:intergenic
AGTGGTTGAGGAGAAGAAGA+TGG 0.476823 4_1:+82948072 None:intergenic
TGACTGTGACGGCGTCATCT+TGG 0.485254 4_1:-82948157 Msa0578400:CDS
GAGATAGGAATGGGAAGTGG+AGG 0.489137 4_1:+82948329 None:intergenic
TACCAGCAAGGAAGCAATCA+AGG 0.493810 4_1:+82945574 None:intergenic
TTGGTTTATGTGAGTAAAGC+CGG 0.504542 4_1:-82944038 Msa0578400:three_prime_UTR
TTTAGGTACTTTAAGGAACA+TGG 0.507062 4_1:-82947861 Msa0578400:intron
TAGAATTATTGTTTATGACA+TGG 0.513032 4_1:-82944089 Msa0578400:three_prime_UTR
GTCACATATATTGACGGGTC+GGG 0.515661 4_1:+82945411 None:intergenic
AGATAGGAATGGGAAGTGGA+GGG 0.517620 4_1:+82948330 None:intergenic
GTTTCGAATAACGTTGATGA+AGG 0.523215 4_1:+82947834 None:intergenic
CTACAGGCAGCAACACAAGC+AGG 0.528121 4_1:-82944450 Msa0578400:intron
GGTTTGGGAGAGATAGGAAT+GGG 0.529561 4_1:+82948320 None:intergenic
GCTCGTTCCTCATCACTAGT+AGG 0.533793 4_1:+82947807 None:intergenic
TAAAGCCGGTCGAAAGTTTG+AGG 0.533834 4_1:-82944024 Msa0578400:three_prime_UTR
GGTCCTCACCTGCTCAGCGG+TGG 0.535481 4_1:+82944398 None:intergenic
GACATTCAAAATACAAACAA+TGG 0.540677 4_1:+82943895 None:intergenic
ATAAACCTCAAACTTTCGAC+CGG 0.546212 4_1:+82944019 None:intergenic
TTCTCCTCAACCACTCAACT+GGG 0.557699 4_1:-82948064 Msa0578400:CDS
CAAGTCAGGGTAGATTGCTA+TGG 0.559972 4_1:+82944258 None:intergenic
TATTGTGCATTGCAGAAGTT+GGG 0.566001 4_1:-82945294 Msa0578400:intron
ACTTTAAGGTGATGATGTGA+AGG 0.567495 4_1:-82945442 Msa0578400:intron
AAGCAGTCACATATATTGAC+GGG 0.575556 4_1:+82945406 None:intergenic
GAAGCAGTCACATATATTGA+CGG 0.578807 4_1:+82945405 None:intergenic
ACCTTACGTTACTCAAGTCA+GGG 0.584360 4_1:+82944245 None:intergenic
AAAGTGATGATGAAGATGAA+TGG 0.585437 4_1:-82948411 Msa0578400:CDS
CTTCAGAACCAAATTGGTGG+TGG 0.586682 4_1:-82948021 Msa0578400:CDS
GCTCTTATATTTGACTGTGA+CGG 0.589256 4_1:-82948168 Msa0578400:CDS
TGGTTTGGGAGAGATAGGAA+TGG 0.592029 4_1:+82948319 None:intergenic
ACCCTGACTTGAGTAACGTA+AGG 0.601515 4_1:-82944246 Msa0578400:intron
CGTTCCTCATCACTAGTAGG+AGG 0.603956 4_1:+82947810 None:intergenic
TTAGGTACTTTAAGGAACAT+GGG 0.606397 4_1:-82947860 Msa0578400:intron
CTCAGCGGTGGAAGATGTGT+AGG 0.610677 4_1:+82944410 None:intergenic
CAACTTCAGAACCAAATTGG+TGG 0.613914 4_1:-82948024 Msa0578400:CDS
AATTCTATATCCCAGTTGAG+TGG 0.615799 4_1:+82948054 None:intergenic
AACTCCTCCTACTAGTGATG+AGG 0.626635 4_1:-82947814 Msa0578400:CDS
AAAGTTTGAGGTTTATCACA+AGG 0.626874 4_1:-82944012 Msa0578400:three_prime_UTR
GTGGCAAACCCAAAATGCGA+TGG 0.629207 4_1:-82948002 Msa0578400:intron
AGTCACATATATTGACGGGT+CGG 0.635716 4_1:+82945410 None:intergenic
TACAGGCAGCAACACAAGCA+GGG 0.645859 4_1:-82944449 Msa0578400:intron
CTGAGACTTTAAAGAAGACG+CGG 0.660397 4_1:+82948232 None:intergenic
GTGATGTGCATATACCAGCA+AGG 0.664382 4_1:+82945562 None:intergenic
GGTACTTTAAGGAACATGGG+TGG 0.677672 4_1:-82947857 Msa0578400:CDS
ACAAGCAGGGATGTCTTGTG+TGG 0.683817 4_1:-82944436 Msa0578400:CDS
GCACAGGTAAAACCTAGACC+AGG 0.687401 4_1:-82945953 Msa0578400:intron
GAGGGTCCTCACCTGCTCAG+CGG 0.688575 4_1:+82944395 None:intergenic
GTGAGTGAGAGTAGAAGCCA+TGG 0.700081 4_1:+82948368 None:intergenic
AGACTTTAAAGAAGACGCGG+TGG 0.704059 4_1:+82948235 None:intergenic
ATGGTTGATGAACATGACCA+TGG 0.713190 4_1:-82948385 Msa0578400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATATTAAATTTATTTTTTG+AGG - chr4_1:82945353-82945372 Msa0578400:intron 10.0%
!!! TATTAAATTTATTTTTTGAG+GGG - chr4_1:82945355-82945374 Msa0578400:intron 10.0%
!! TTAAATAAAATTGATAGATA+AGG + chr4_1:82946816-82946835 None:intergenic 10.0%
!!! TCAATTTTATTTAAACTTTA+AGG - chr4_1:82946822-82946841 Msa0578400:intron 10.0%
!! GATATTAAATTTATTTATTG+AGG - chr4_1:82947596-82947615 Msa0578400:intron 10.0%
!! TATTAAATTTATTTATTGAG+GGG - chr4_1:82947598-82947617 Msa0578400:intron 10.0%
!!! TTATTGTATTGAGAATTTTT+AGG - chr4_1:82944400-82944419 Msa0578400:intron 15.0%
!! TTGTATTTATTATTATGACT+TGG - chr4_1:82944552-82944571 Msa0578400:intron 15.0%
!! AAAATAAATTTAATATCGTG+TGG + chr4_1:82945350-82945369 None:intergenic 15.0%
!!! ATTAAATTTATTTTTTGAGG+GGG - chr4_1:82945356-82945375 Msa0578400:intron 15.0%
!!! AAAATTTAGACTTTATTTGT+GGG + chr4_1:82945460-82945479 None:intergenic 15.0%
!!! AAAAATTTAGACTTTATTTG+TGG + chr4_1:82945461-82945480 None:intergenic 15.0%
!! TAAATGAAAAATTTAGAAGT+TGG - chr4_1:82945549-82945568 Msa0578400:intron 15.0%
!! AAATGAAAAATTTAGAAGTT+GGG - chr4_1:82945550-82945569 Msa0578400:intron 15.0%
!!! ATATTACAAAAGTATATATC+CGG + chr4_1:82946398-82946417 None:intergenic 15.0%
!!! ATAAATTATACTTGGTAATT+TGG + chr4_1:82946963-82946982 None:intergenic 15.0%
!! CACAATATATAAATTATACT+TGG + chr4_1:82946971-82946990 None:intergenic 15.0%
!! TAAATAAATTTAATATCGTG+TGG + chr4_1:82947593-82947612 None:intergenic 15.0%
!! ATTAAATTTATTTATTGAGG+GGG - chr4_1:82947599-82947618 Msa0578400:intron 15.0%
!! ATAAAAGAAAAGAAAAACAA+AGG + chr4_1:82948299-82948318 None:intergenic 15.0%
!! AAAGAAAGTAACTTAATTGT+TGG + chr4_1:82944002-82944021 None:intergenic 20.0%
!! TTTACTCAATCAAAATAAGT+TGG + chr4_1:82944989-82945008 None:intergenic 20.0%
!!! AAATTTAGACTTTATTTGTG+GGG + chr4_1:82945459-82945478 None:intergenic 20.0%
!!! GTTTGCTTTAAGTATTTATT+TGG - chr4_1:82945481-82945500 Msa0578400:intron 20.0%
!! AAGAAACATGTTAAAATGAT+GGG + chr4_1:82945769-82945788 None:intergenic 20.0%
!! TAAGAAACATGTTAAAATGA+TGG + chr4_1:82945770-82945789 None:intergenic 20.0%
!! CATTTAATCATGTTAAGATA+TGG - chr4_1:82945938-82945957 Msa0578400:CDS 20.0%
!!! TTTGAAAAGTGAAATTTTGA+GGG - chr4_1:82946928-82946947 Msa0578400:intron 20.0%
!! AACATGATTAAATGCAATTT+AGG + chr4_1:82945932-82945951 None:intergenic 20.0%
!! CAAAACTAATAAATTTCTAC+AGG - chr4_1:82947812-82947831 Msa0578400:CDS 20.0%
!! TACGATTTGATATTGAAATT+CGG - chr4_1:82947929-82947948 Msa0578400:intron 20.0%
!! TAGAATTATTGTTTATGACA+TGG - chr4_1:82948189-82948208 Msa0578400:CDS 20.0%
!! TATTATTAGTTACCTTGAAT+TGG - chr4_1:82948221-82948240 Msa0578400:CDS 20.0%
!!! TTCTTTTACATGTTTTTATG+TGG - chr4_1:82948324-82948343 Msa0578400:CDS 20.0%
!! TTCATTGCAAAATGTAATAA+AGG - chr4_1:82948353-82948372 Msa0578400:CDS 20.0%
! AAGAAAGAAAGAAGAAAGAA+AGG + chr4_1:82944304-82944323 None:intergenic 25.0%
!!! GAGAATTTTTAGGTACTTTA+AGG - chr4_1:82944410-82944429 Msa0578400:CDS 25.0%
! TGTGTAGTAATTTAGTACTT+AGG - chr4_1:82944698-82944717 Msa0578400:intron 25.0%
! CTGGTTACTATTTATTTAGA+GGG - chr4_1:82944809-82944828 Msa0578400:intron 25.0%
! TGGTTACTATTTATTTAGAG+GGG - chr4_1:82944810-82944829 Msa0578400:intron 25.0%
! ACGATTATAGTTTCATTGTT+TGG - chr4_1:82944899-82944918 Msa0578400:intron 25.0%
!! CAATCAAAATAAGTTGGAAA+AGG + chr4_1:82944983-82945002 None:intergenic 25.0%
!! AATTTGAGACTTAAGTCAAA+TGG - chr4_1:82945108-82945127 Msa0578400:intron 25.0%
! TTATTTCATCTAACCAATGT+GGG + chr4_1:82945193-82945212 None:intergenic 25.0%
! ATTTACAGAACTTATGATAC+TGG + chr4_1:82945534-82945553 None:intergenic 25.0%
! CATGATTCACTTATATTTCT+TGG + chr4_1:82945819-82945838 None:intergenic 25.0%
! TACAAAGATATAATCAAGTC+TGG - chr4_1:82946196-82946215 Msa0578400:intron 25.0%
!! ATTAAATTACCTTCGCATTT+TGG - chr4_1:82946303-82946322 Msa0578400:intron 25.0%
! TTAATACTTGTTCTCTCTAT+TGG - chr4_1:82946611-82946630 Msa0578400:intron 25.0%
! TAATACTTGTTCTCTCTATT+GGG - chr4_1:82946612-82946631 Msa0578400:intron 25.0%
! TTGATAGATAAGGTTAAACT+TGG + chr4_1:82946806-82946825 None:intergenic 25.0%
! GTATTGTCATATTAAAACCT+GGG + chr4_1:82946898-82946917 None:intergenic 25.0%
!!! CTTTGAAAAGTGAAATTTTG+AGG - chr4_1:82946927-82946946 Msa0578400:intron 25.0%
! CTCTTTATATGTTGTGAAAA+AGG - chr4_1:82947106-82947125 Msa0578400:intron 25.0%
!!! TTGTTGTTTGATATAGTAGT+TGG - chr4_1:82945855-82945874 Msa0578400:intron 25.0%
! TCTATTCACAAATCTCTATT+TGG - chr4_1:82947235-82947254 Msa0578400:intron 25.0%
! AAATGCAATTTAGGTAGATA+AGG + chr4_1:82947263-82947282 None:intergenic 25.0%
! TTAGAAAATCATACCTTTCT+CGG - chr4_1:82947499-82947518 Msa0578400:intron 25.0%
! TCAGTTTAATATCTGATATG+TGG - chr4_1:82947558-82947577 Msa0578400:intron 25.0%
! CAGTTTAATATCTGATATGT+GGG - chr4_1:82947559-82947578 Msa0578400:intron 25.0%
! AACAAAACTTAAGACTTCAA+TGG + chr4_1:82947707-82947726 None:intergenic 25.0%
!!! ACAAAAGATGATTAGTTTAG+TGG + chr4_1:82947765-82947784 None:intergenic 25.0%
!! TTCTGGTTAAATTCATTTGA+GGG + chr4_1:82947904-82947923 None:intergenic 25.0%
!!! TTTCTGGTTAAATTCATTTG+AGG + chr4_1:82947905-82947924 None:intergenic 25.0%
!! TATCAAATCGTAGTATTTTC+TGG + chr4_1:82947921-82947940 None:intergenic 25.0%
! ACGATTTGATATTGAAATTC+GGG - chr4_1:82947930-82947949 Msa0578400:intron 25.0%
! GACATTCAAAATACAAACAA+TGG + chr4_1:82948386-82948405 None:intergenic 25.0%
! AAAGTGATGATGAAGATGAA+TGG - chr4_1:82943867-82943886 Msa0578400:three_prime_UTR 30.0%
TGATGAAGATGAATGGTAAA+TGG - chr4_1:82943874-82943893 Msa0578400:three_prime_UTR 30.0%
! TTTAGGTACTTTAAGGAACA+TGG - chr4_1:82944417-82944436 Msa0578400:CDS 30.0%
! TTAGGTACTTTAAGGAACAT+GGG - chr4_1:82944418-82944437 Msa0578400:CDS 30.0%
TTCTGTTCTGATAGTACATT+CGG + chr4_1:82944676-82944695 None:intergenic 30.0%
GTAGTAATTTAGTACTTAGG+AGG - chr4_1:82944701-82944720 Msa0578400:intron 30.0%
CCTCTAAATAAATAGTAACC+AGG + chr4_1:82944811-82944830 None:intergenic 30.0%
CCTGGTTACTATTTATTTAG+AGG - chr4_1:82944808-82944827 Msa0578400:intron 30.0%
TTTATTTAGAGGGGAAAACT+TGG - chr4_1:82944819-82944838 Msa0578400:intron 30.0%
TTCCTACTGTATAGTTGAAA+GGG + chr4_1:82944862-82944881 None:intergenic 30.0%
ATTCCTACTGTATAGTTGAA+AGG + chr4_1:82944863-82944882 None:intergenic 30.0%
CTCAAATTCATTCTTCAATG+TGG + chr4_1:82945096-82945115 None:intergenic 30.0%
! GTTATTTCATCTAACCAATG+TGG + chr4_1:82945194-82945213 None:intergenic 30.0%
! AGATGAAATAACAAGTACTG+AGG - chr4_1:82945202-82945221 Msa0578400:intron 30.0%
TTTGCAAATCATACCTTTCT+CGG - chr4_1:82945256-82945275 Msa0578400:CDS 30.0%
TGTATTGTAGTGTTAAAAGC+TGG - chr4_1:82945615-82945634 Msa0578400:intron 30.0%
GACATGTTCATGAAAATAGA+TGG + chr4_1:82945713-82945732 None:intergenic 30.0%
!!! AGTCAAAGTTATTTTGAGTG+AGG - chr4_1:82946009-82946028 Msa0578400:intron 30.0%
ACAAGTGTTTGAACTTTCAT+AGG + chr4_1:82946051-82946070 None:intergenic 30.0%
!! CTTGCATAACTAGCTTATTT+TGG - chr4_1:82946083-82946102 Msa0578400:CDS 30.0%
AGAGTATGGTGTAATTTCAT+TGG - chr4_1:82946147-82946166 Msa0578400:intron 30.0%
TGTAATTTCATTGGTCATGT+AGG - chr4_1:82946156-82946175 Msa0578400:intron 30.0%
ATTCAGGAATGTGGAATATT+AGG + chr4_1:82946243-82946262 None:intergenic 30.0%
ATCAAGTATAACGGTAAACA+AGG + chr4_1:82946459-82946478 None:intergenic 30.0%
TGTTTACCGTTATACTTGAT+TGG - chr4_1:82946459-82946478 Msa0578400:intron 30.0%
ACCAAACCAATCAAGTATAA+CGG + chr4_1:82946468-82946487 None:intergenic 30.0%
!! TATACTTGATTGGTTTGGTT+CGG - chr4_1:82946469-82946488 Msa0578400:intron 30.0%
CTTTGTCTTGAAAACCTTAT+TGG - chr4_1:82946573-82946592 Msa0578400:intron 30.0%
GAGAGAACAAGTATTAAAGT+AGG + chr4_1:82946608-82946627 None:intergenic 30.0%
!!! CATCTTATTTTTTCTACTGC+AGG - chr4_1:82946668-82946687 Msa0578400:intron 30.0%
GGTATTGTCATATTAAAACC+TGG + chr4_1:82946899-82946918 None:intergenic 30.0%
!! TCACTTTTCAAAGTTCTTGA+TGG + chr4_1:82946920-82946939 None:intergenic 30.0%
TGTATCAGAGAAAAATTGCT+TGG - chr4_1:82947007-82947026 Msa0578400:intron 30.0%
TTGTTTCATCTAACCAATGT+GGG + chr4_1:82947438-82947457 None:intergenic 30.0%
AGATGAAACAACAAATACTG+AGG - chr4_1:82947447-82947466 Msa0578400:intron 30.0%
!! GAAAGGTATGATTTTCTAAG+AGG + chr4_1:82947498-82947517 None:intergenic 30.0%
AAACTTAAGACTTCAATGGT+GGG + chr4_1:82947703-82947722 None:intergenic 30.0%
AAAACTTAAGACTTCAATGG+TGG + chr4_1:82947704-82947723 None:intergenic 30.0%
ATTTGATATTGAAATTCGGG+TGG - chr4_1:82947933-82947952 Msa0578400:intron 30.0%
! TTTTGTCTTTGATCGAATGT+AGG - chr4_1:82947985-82948004 Msa0578400:intron 30.0%
!! TGCTGAAAACTGTTTCTATT+AGG - chr4_1:82948071-82948090 Msa0578400:CDS 30.0%
TTTATGCAGCTTGAAAGATT+TGG - chr4_1:82948134-82948153 Msa0578400:CDS 30.0%
TACTCACATAAACCAATTCA+AGG + chr4_1:82948236-82948255 None:intergenic 30.0%
! AAAGTTTGAGGTTTATCACA+AGG - chr4_1:82948266-82948285 Msa0578400:CDS 30.0%
CTCTCATGAATTTACTTTCA+TGG - chr4_1:82948405-82948424 Msa0578400:CDS 30.0%
! ATCACTCTCTATGTTTTGTG+TGG + chr4_1:82943843-82943862 None:intergenic 35.0%
GCTCTTATATTTGACTGTGA+CGG - chr4_1:82944110-82944129 Msa0578400:CDS 35.0%
AATTCTATATCCCAGTTGAG+TGG + chr4_1:82944227-82944246 None:intergenic 35.0%
GATCAACTTCAGAACCAAAT+TGG - chr4_1:82944251-82944270 Msa0578400:CDS 35.0%
! GTTTCGAATAACGTTGATGA+AGG + chr4_1:82944447-82944466 None:intergenic 35.0%
GTCTTATGTCAAACACACAT+CGG + chr4_1:82944618-82944637 None:intergenic 35.0%
ATGGGAAACATGGTAATTAG+TGG + chr4_1:82944728-82944747 None:intergenic 35.0%
AGTCTCATCCTATGAACAAT+GGG + chr4_1:82944746-82944765 None:intergenic 35.0%
AAGTCTCATCCTATGAACAA+TGG + chr4_1:82944747-82944766 None:intergenic 35.0%
TCATAGGATGAGACTTAGAT+TGG - chr4_1:82944751-82944770 Msa0578400:intron 35.0%
GACTTAGATTGGAAATATGC+AGG - chr4_1:82944762-82944781 Msa0578400:intron 35.0%
! TAAACTAAACTTGCTTGTCC+TGG - chr4_1:82944790-82944809 Msa0578400:intron 35.0%
TCCTACTGTATAGTTGAAAG+GGG + chr4_1:82944861-82944880 None:intergenic 35.0%
ATGAGTTATATGTCCCACAT+TGG - chr4_1:82945177-82945196 Msa0578400:intron 35.0%
TACACTTGATCTTAGCCAAA+AGG + chr4_1:82945282-82945301 None:intergenic 35.0%
ATATCTGATATGTGAGCCAA+TGG - chr4_1:82945323-82945342 Msa0578400:intron 35.0%
TTTAATATCGTGTGGACCAT+TGG + chr4_1:82945342-82945361 None:intergenic 35.0%
GAAGTTGGGATGAGATTATT+TGG - chr4_1:82945564-82945583 Msa0578400:intron 35.0%
!!! AGCATGGAAGTTTTGAACTT+GGG - chr4_1:82945587-82945606 Msa0578400:CDS 35.0%
CTCTTGAATAACTGTAAACC+TGG - chr4_1:82945651-82945670 Msa0578400:intron 35.0%
TAGGTTTACAATTGCTAACC+AGG + chr4_1:82945672-82945691 None:intergenic 35.0%
GTTCATTTGAGTGTGAAAGT+AGG + chr4_1:82945691-82945710 None:intergenic 35.0%
! GGGATTCAAATTGTTAGTCT+TGG + chr4_1:82945749-82945768 None:intergenic 35.0%
! GTTGATTCCATATGACATGA+AGG - chr4_1:82945966-82945985 Msa0578400:intron 35.0%
GTTGTATCCTTCATGTCATA+TGG + chr4_1:82945976-82945995 None:intergenic 35.0%
ATTACACCATACTCTAAGTG+AGG + chr4_1:82946142-82946161 None:intergenic 35.0%
TTTCATTGGTCATGTAGGAT+TGG - chr4_1:82946161-82946180 Msa0578400:intron 35.0%
AAATACCACCTTCACAATTC+AGG + chr4_1:82946259-82946278 None:intergenic 35.0%
AATTTCAAAACTCCTGGTCT+AGG + chr4_1:82946340-82946359 None:intergenic 35.0%
!!! ACCAGGAGTTTTGAAATTGA+TGG - chr4_1:82946342-82946361 Msa0578400:intron 35.0%
TCCATCAATTTCAAAACTCC+TGG + chr4_1:82946346-82946365 None:intergenic 35.0%
AAATAATCGTACAGCATCTC+TGG + chr4_1:82946374-82946393 None:intergenic 35.0%
GATGCTGTACGATTATTTAC+CGG - chr4_1:82946376-82946395 Msa0578400:intron 35.0%
! ACCGTTATACTTGATTGGTT+TGG - chr4_1:82946464-82946483 Msa0578400:intron 35.0%
! TTTTGCTCAATTACTGATGC+AGG - chr4_1:82946503-82946522 Msa0578400:intron 35.0%
TTTGCTCAATTACTGATGCA+GGG - chr4_1:82946504-82946523 Msa0578400:intron 35.0%
GTAGGCTTACAATTCCAATA+AGG + chr4_1:82946590-82946609 None:intergenic 35.0%
!! ACTTTAAGGTGATGATGTGA+AGG - chr4_1:82946836-82946855 Msa0578400:intron 35.0%
AAGCAGTCACATATATTGAC+GGG + chr4_1:82946875-82946894 None:intergenic 35.0%
GAAGCAGTCACATATATTGA+CGG + chr4_1:82946876-82946895 None:intergenic 35.0%
ATATTGTGCATTGCAGAAGT+TGG - chr4_1:82946983-82947002 Msa0578400:intron 35.0%
TATTGTGCATTGCAGAAGTT+GGG - chr4_1:82946984-82947003 Msa0578400:intron 35.0%
ATCAGAGAAAAATTGCTTGG+TGG - chr4_1:82947010-82947029 Msa0578400:intron 35.0%
!! GGATAGTGTTATTGGTTTAC+AGG - chr4_1:82947037-82947056 Msa0578400:intron 35.0%
AGCTTGTGTTAGAAAGTTAG+AGG - chr4_1:82947154-82947173 Msa0578400:intron 35.0%
GCTTGTGTTAGAAAGTTAGA+GGG - chr4_1:82947155-82947174 Msa0578400:intron 35.0%
! GTTGTTTCATCTAACCAATG+TGG + chr4_1:82947439-82947458 None:intergenic 35.0%
!! GGTATGATTTTCTAAGAGGA+TGG + chr4_1:82947494-82947513 None:intergenic 35.0%
TACACTTGATCTTAGCCAAA+AGG + chr4_1:82945282-82945301 None:intergenic 35.0%
TTTAATATCGTGTGGACCAT+TGG + chr4_1:82945342-82945361 None:intergenic 35.0%
ATTTATTTATTGAGGGGGAG+AGG - chr4_1:82947604-82947623 Msa0578400:intron 35.0%
AACTTAAGACTTCAATGGTG+GGG + chr4_1:82947702-82947721 None:intergenic 35.0%
TTGGTTTATGTGAGTAAAGC+CGG - chr4_1:82948240-82948259 Msa0578400:CDS 35.0%
ATAAACCTCAAACTTTCGAC+CGG + chr4_1:82948262-82948281 None:intergenic 35.0%
!! ATGGTTGATGAACATGACCA+TGG - chr4_1:82943893-82943912 Msa0578400:three_prime_UTR 40.0%
! ACGAAAACAGTGTCTGGTTT+GGG + chr4_1:82943976-82943995 None:intergenic 40.0%
AACGAAAACAGTGTCTGGTT+TGG + chr4_1:82943977-82943996 None:intergenic 40.0%
TGGATAACGAAAACAGTGTC+TGG + chr4_1:82943982-82944001 None:intergenic 40.0%
! CTGAGACTTTAAAGAAGACG+CGG + chr4_1:82944049-82944068 None:intergenic 40.0%
CAACTTCAGAACCAAATTGG+TGG - chr4_1:82944254-82944273 Msa0578400:CDS 40.0%
! GAAAGGAACCATCGCATTTT+GGG + chr4_1:82944287-82944306 None:intergenic 40.0%
! AGAAAGGAACCATCGCATTT+TGG + chr4_1:82944288-82944307 None:intergenic 40.0%
!! CTGAAGAGTGTCAATCAACT+TGG + chr4_1:82944496-82944515 None:intergenic 40.0%
!! CAAGTTGATTGACACTCTTC+AGG - chr4_1:82944494-82944513 Msa0578400:intron 40.0%
TCCACTGTGTAAGTGTATAG+TGG + chr4_1:82944578-82944597 None:intergenic 40.0%
GCACTAACACTTCAGATTGA+AGG + chr4_1:82944644-82944663 None:intergenic 40.0%
CCTATGAACAATGGGAAACA+TGG + chr4_1:82944738-82944757 None:intergenic 40.0%
CCATGTTTCCCATTGTTCAT+AGG - chr4_1:82944735-82944754 Msa0578400:intron 40.0%
AAGTGAGGCAACAATTGACA+GGG + chr4_1:82945061-82945080 None:intergenic 40.0%
TAAGTGAGGCAACAATTGAC+AGG + chr4_1:82945062-82945081 None:intergenic 40.0%
TGTTGCCTCACTTAAGAGTA+TGG - chr4_1:82945068-82945087 Msa0578400:intron 40.0%
AAGTCAAATGGTAGCTGCAT+TGG - chr4_1:82945120-82945139 Msa0578400:intron 40.0%
!! CACCACAATAGCTTGCTATT+GGG - chr4_1:82945385-82945404 Msa0578400:intron 40.0%
! GGATGAGATTATTTGGAGCA+TGG - chr4_1:82945571-82945590 Msa0578400:intron 40.0%
!!! GAGCATGGAAGTTTTGAACT+TGG - chr4_1:82945586-82945605 Msa0578400:CDS 40.0%
GTAGTGTTAAAAGCTGGACT+TGG - chr4_1:82945621-82945640 Msa0578400:intron 40.0%
AAGTGAGGCAACAATTGACA+GGG + chr4_1:82945061-82945080 None:intergenic 40.0%
TAAGTGAGGCAACAATTGAC+AGG + chr4_1:82945062-82945081 None:intergenic 40.0%
TTGTTGCCTCACTTAGAGTA+TGG - chr4_1:82946133-82946152 Msa0578400:intron 40.0%
GGAATGTGGAATATTAGGAG+AGG + chr4_1:82946238-82946257 None:intergenic 40.0%
TCCACATTCCTGAATTGTGA+AGG - chr4_1:82946248-82946267 Msa0578400:intron 40.0%
ACCTTCACAATTCAGGAATG+TGG + chr4_1:82946252-82946271 None:intergenic 40.0%
ACATTCCTGAATTGTGAAGG+TGG - chr4_1:82946251-82946270 Msa0578400:intron 40.0%
TTGCTCAATTACTGATGCAG+GGG - chr4_1:82946505-82946524 Msa0578400:intron 40.0%
TTGTTCTCTCTATTGGGAGT+AGG - chr4_1:82946618-82946637 Msa0578400:intron 40.0%
TGTTTCCTGCTCATGAGTTT+AGG - chr4_1:82946779-82946798 Msa0578400:intron 40.0%
! AGTCACATATATTGACGGGT+CGG + chr4_1:82946871-82946890 None:intergenic 40.0%
AATATATGTGACTGCTTCCC+AGG - chr4_1:82946878-82946897 Msa0578400:intron 40.0%
! GAAAAATTGCTTGGTGGTAG+AGG - chr4_1:82947016-82947035 Msa0578400:intron 40.0%
GTGGTAGAGGATAGTGTTAT+TGG - chr4_1:82947029-82947048 Msa0578400:intron 40.0%
TGTTAGAAAGTTAGAGGGCA+AGG - chr4_1:82947160-82947179 Msa0578400:intron 40.0%
! AATCCTGACTTTGTTGACTG+TGG - chr4_1:82947303-82947322 Msa0578400:intron 40.0%
TAACCACAGTCAACAAAGTC+AGG + chr4_1:82947309-82947328 None:intergenic 40.0%
TTAAGCGCATTCATCATCCA+AGG - chr4_1:82947326-82947345 Msa0578400:intron 40.0%
ATGAGTTCTATGTCCCACAT+TGG - chr4_1:82947422-82947441 Msa0578400:intron 40.0%
ATATCTGATATGTGGGCCAA+TGG - chr4_1:82947566-82947585 Msa0578400:intron 40.0%
ATTGCTATAGTGCAACGCAA+AGG + chr4_1:82947668-82947687 None:intergenic 40.0%
TTTGCGTTGCACTATAGCAA+TGG - chr4_1:82947667-82947686 Msa0578400:intron 40.0%
TGAAATTCGGGTGGAAAAAC+TGG - chr4_1:82947942-82947961 Msa0578400:intron 40.0%
ACCTTACGTTACTCAAGTCA+GGG + chr4_1:82948036-82948055 None:intergenic 40.0%
TACCTTACGTTACTCAAGTC+AGG + chr4_1:82948037-82948056 None:intergenic 40.0%
AGATAGGAATGGGAAGTGGA+GGG + chr4_1:82943951-82943970 None:intergenic 45.0%
GGTTTGGGAGAGATAGGAAT+GGG + chr4_1:82943961-82943980 None:intergenic 45.0%
! TGGTTTGGGAGAGATAGGAA+TGG + chr4_1:82943962-82943981 None:intergenic 45.0%
AGAAGACGCGGTGGTTATTA+CGG + chr4_1:82944037-82944056 None:intergenic 45.0%
! AGACTTTAAAGAAGACGCGG+TGG + chr4_1:82944046-82944065 None:intergenic 45.0%
ATCTGAGCACTTACATCGTC+AGG - chr4_1:82944145-82944164 Msa0578400:intron 45.0%
AGTGGTTGAGGAGAAGAAGA+TGG + chr4_1:82944209-82944228 None:intergenic 45.0%
TTCTCCTCAACCACTCAACT+GGG - chr4_1:82944214-82944233 Msa0578400:intron 45.0%
ATATCCCAGTTGAGTGGTTG+AGG + chr4_1:82944221-82944240 None:intergenic 45.0%
CTTCAGAACCAAATTGGTGG+TGG - chr4_1:82944257-82944276 Msa0578400:CDS 45.0%
! GGTACTTTAAGGAACATGGG+TGG - chr4_1:82944421-82944440 Msa0578400:CDS 45.0%
AACTCCTCCTACTAGTGATG+AGG - chr4_1:82944464-82944483 Msa0578400:intron 45.0%
GCCACTATACACTTACACAG+TGG - chr4_1:82944574-82944593 Msa0578400:intron 45.0%
! GTCAAACACACATCGGTGTT+TGG + chr4_1:82944611-82944630 None:intergenic 45.0%
GCCCCTTTCAACTATACAGT+AGG - chr4_1:82944857-82944876 Msa0578400:intron 45.0%
TGGCACCATACTCTTAAGTG+AGG + chr4_1:82945076-82945095 None:intergenic 45.0%
! TCATACCTTTCTCGGCCTTT+TGG - chr4_1:82945264-82945283 Msa0578400:CDS 45.0%
CCAATAGCAAGCTATTGTGG+TGG + chr4_1:82945387-82945406 None:intergenic 45.0%
!! CCACCACAATAGCTTGCTAT+TGG - chr4_1:82945384-82945403 Msa0578400:intron 45.0%
GACCCAATAGCAAGCTATTG+TGG + chr4_1:82945390-82945409 None:intergenic 45.0%
GTTGCACTATTGCAATTGCC+TGG - chr4_1:82945429-82945448 Msa0578400:CDS 45.0%
!! TTACCTTCGCATTTTGGCAC+AGG - chr4_1:82946309-82946328 Msa0578400:intron 45.0%
TTACCTGTGCCAAAATGCGA+AGG + chr4_1:82946315-82946334 None:intergenic 45.0%
TACCAGCAAGGAAGCAATCA+AGG + chr4_1:82946707-82946726 None:intergenic 45.0%
GTGATGTGCATATACCAGCA+AGG + chr4_1:82946719-82946738 None:intergenic 45.0%
TTGGTCCTAAACTCATGAGC+AGG + chr4_1:82946787-82946806 None:intergenic 45.0%
! GTCACATATATTGACGGGTC+GGG + chr4_1:82946870-82946889 None:intergenic 45.0%
GAAGCGTGGATCATTAGACT+TGG - chr4_1:82947352-82947371 Msa0578400:intron 45.0%
CGTGGATCATTAGACTTGGA+TGG - chr4_1:82947356-82947375 Msa0578400:intron 45.0%
GACTTGGATGGTTTCTGCAT+TGG - chr4_1:82947368-82947387 Msa0578400:intron 45.0%
! TCATACCTTTCTCGGCCTTT+TGG - chr4_1:82945264-82945283 Msa0578400:CDS 45.0%
TGGCTGCATGATGACATAAC+TGG - chr4_1:82947962-82947981 Msa0578400:intron 45.0%
CAAGTCAGGGTAGATTGCTA+TGG + chr4_1:82948023-82948042 None:intergenic 45.0%
! ACCCTGACTTGAGTAACGTA+AGG - chr4_1:82948032-82948051 Msa0578400:CDS 45.0%
TAAAGCCGGTCGAAAGTTTG+AGG - chr4_1:82948254-82948273 Msa0578400:CDS 45.0%
!!! ATATTAAATTTATTTTTTGA+GGG - chr4_1:82945354-82945373 Msa0578400:intron 5.0%
!! ATATTAAATTTATTTATTGA+GGG - chr4_1:82947597-82947616 Msa0578400:intron 5.0%
GTGAGTGAGAGTAGAAGCCA+TGG + chr4_1:82943913-82943932 None:intergenic 50.0%
GAGATAGGAATGGGAAGTGG+AGG + chr4_1:82943952-82943971 None:intergenic 50.0%
GGAGAGATAGGAATGGGAAG+TGG + chr4_1:82943955-82943974 None:intergenic 50.0%
!! GTGTCTGGTTTGGGAGAGAT+AGG + chr4_1:82943967-82943986 None:intergenic 50.0%
CTTCTCCTCAACCACTCAAC+TGG - chr4_1:82944213-82944232 Msa0578400:intron 50.0%
TGGGTTTGCCACCACCAATT+TGG + chr4_1:82944268-82944287 None:intergenic 50.0%
GTGGCAAACCCAAAATGCGA+TGG - chr4_1:82944276-82944295 Msa0578400:intron 50.0%
CGTTCCTCATCACTAGTAGG+AGG + chr4_1:82944471-82944490 None:intergenic 50.0%
GCTCGTTCCTCATCACTAGT+AGG + chr4_1:82944474-82944493 None:intergenic 50.0%
CTTAGCCAAAAGGCCGAGAA+AGG + chr4_1:82945272-82945291 None:intergenic 50.0%
GCACAGGTAAAACCTAGACC+AGG - chr4_1:82946325-82946344 Msa0578400:intron 50.0%
AGCCTTGATTGCTTCCTTGC+TGG - chr4_1:82946702-82946721 Msa0578400:intron 50.0%
ATCATCCAAGGCTTGAAGCG+TGG - chr4_1:82947338-82947357 Msa0578400:intron 50.0%
ATGATCCACGCTTCAAGCCT+TGG + chr4_1:82947346-82947365 None:intergenic 50.0%
CTTAGCCAAAAGGCCGAGAA+AGG + chr4_1:82945272-82945291 None:intergenic 50.0%
!! CACCACGGTAGCTTGCTATT+GGG - chr4_1:82947628-82947647 Msa0578400:intron 50.0%
GTTGCACTATAGCAATGGCC+TGG - chr4_1:82947672-82947691 Msa0578400:intron 50.0%
TACAGGCAGCAACACAAGCA+GGG - chr4_1:82947829-82947848 Msa0578400:CDS 50.0%
ACAAGCAGGGATGTCTTGTG+TGG - chr4_1:82947842-82947861 Msa0578400:CDS 50.0%
TGACTGTGACGGCGTCATCT+TGG - chr4_1:82944121-82944140 Msa0578400:CDS 55.0%
! CTTTATTTGTGGGGTGCGCC+AGG + chr4_1:82945450-82945469 None:intergenic 55.0%
CCAATAGCAAGCTACCGTGG+TGG + chr4_1:82947630-82947649 None:intergenic 55.0%
!! CCACCACGGTAGCTTGCTAT+TGG - chr4_1:82947627-82947646 Msa0578400:intron 55.0%
CTACAGGCAGCAACACAAGC+AGG - chr4_1:82947828-82947847 Msa0578400:CDS 55.0%
CTCAGCGGTGGAAGATGTGT+AGG + chr4_1:82947871-82947890 None:intergenic 55.0%
GGCCCAATAGCAAGCTACCG+TGG + chr4_1:82947633-82947652 None:intergenic 60.0%
ACGCAAAGGCGACGCAAGAG+AGG + chr4_1:82947654-82947673 None:intergenic 60.0%
CACATCTTCCACCGCTGAGC+AGG - chr4_1:82947872-82947891 Msa0578400:intron 60.0%
TTGAGGGGGAGAGGCCACCA+CGG - chr4_1:82947613-82947632 Msa0578400:intron 65.0%
! CTTCAATGGTGGGGTGCGCC+AGG + chr4_1:82947693-82947712 None:intergenic 65.0%
CTTCCACCGCTGAGCAGGTG+AGG - chr4_1:82947877-82947896 Msa0578400:intron 65.0%
GAGGGTCCTCACCTGCTCAG+CGG + chr4_1:82947886-82947905 None:intergenic 65.0%
GGTCCTCACCTGCTCAGCGG+TGG + chr4_1:82947883-82947902 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 82943804 82948496 82943804 ID=Msa0578400;Name=Msa0578400
chr4_1 mRNA 82943804 82948496 82943804 ID=Msa0578400-mRNA-1;Parent=Msa0578400;Name=Msa0578400-mRNA-1;_AED=0.12;_eAED=0.12;_QI=57|1|1|1|1|1|11|305|335
chr4_1 exon 82943804 82944157 82943804 ID=Msa0578400-mRNA-1:exon:30163;Parent=Msa0578400-mRNA-1
chr4_1 exon 82944247 82944293 82944247 ID=Msa0578400-mRNA-1:exon:30162;Parent=Msa0578400-mRNA-1
chr4_1 exon 82944407 82944466 82944407 ID=Msa0578400-mRNA-1:exon:30161;Parent=Msa0578400-mRNA-1
chr4_1 exon 82945242 82945301 82945242 ID=Msa0578400-mRNA-1:exon:30160;Parent=Msa0578400-mRNA-1
chr4_1 exon 82945401 82945456 82945401 ID=Msa0578400-mRNA-1:exon:30159;Parent=Msa0578400-mRNA-1
chr4_1 exon 82945577 82945610 82945577 ID=Msa0578400-mRNA-1:exon:30158;Parent=Msa0578400-mRNA-1
chr4_1 exon 82945701 82945775 82945701 ID=Msa0578400-mRNA-1:exon:30157;Parent=Msa0578400-mRNA-1
chr4_1 exon 82945919 82945969 82945919 ID=Msa0578400-mRNA-1:exon:30156;Parent=Msa0578400-mRNA-1
chr4_1 exon 82946078 82946122 82946078 ID=Msa0578400-mRNA-1:exon:30155;Parent=Msa0578400-mRNA-1
chr4_1 exon 82947785 82947878 82947785 ID=Msa0578400-mRNA-1:exon:30154;Parent=Msa0578400-mRNA-1
chr4_1 exon 82948003 82948496 82948003 ID=Msa0578400-mRNA-1:exon:30153;Parent=Msa0578400-mRNA-1
chr4_1 five_prime_UTR 82948440 82948496 82948440 ID=Msa0578400-mRNA-1:five_prime_utr;Parent=Msa0578400-mRNA-1
chr4_1 CDS 82948003 82948439 82948003 ID=Msa0578400-mRNA-1:cds;Parent=Msa0578400-mRNA-1
chr4_1 CDS 82947785 82947878 82947785 ID=Msa0578400-mRNA-1:cds;Parent=Msa0578400-mRNA-1
chr4_1 CDS 82946078 82946122 82946078 ID=Msa0578400-mRNA-1:cds;Parent=Msa0578400-mRNA-1
chr4_1 CDS 82945919 82945969 82945919 ID=Msa0578400-mRNA-1:cds;Parent=Msa0578400-mRNA-1
chr4_1 CDS 82945701 82945775 82945701 ID=Msa0578400-mRNA-1:cds;Parent=Msa0578400-mRNA-1
chr4_1 CDS 82945577 82945610 82945577 ID=Msa0578400-mRNA-1:cds;Parent=Msa0578400-mRNA-1
chr4_1 CDS 82945401 82945456 82945401 ID=Msa0578400-mRNA-1:cds;Parent=Msa0578400-mRNA-1
chr4_1 CDS 82945242 82945301 82945242 ID=Msa0578400-mRNA-1:cds;Parent=Msa0578400-mRNA-1
chr4_1 CDS 82944407 82944466 82944407 ID=Msa0578400-mRNA-1:cds;Parent=Msa0578400-mRNA-1
chr4_1 CDS 82944247 82944293 82944247 ID=Msa0578400-mRNA-1:cds;Parent=Msa0578400-mRNA-1
chr4_1 CDS 82944109 82944157 82944109 ID=Msa0578400-mRNA-1:cds;Parent=Msa0578400-mRNA-1
chr4_1 three_prime_UTR 82943804 82944108 82943804 ID=Msa0578400-mRNA-1:three_prime_utr;Parent=Msa0578400-mRNA-1
Gene Sequence

>Msa0578400

ATGAATAAAGTGATGATGAAGATGAATGGTAAATGGTTGATGAACATGACCATGGCTTCTACTCTCACTCACACACTCTCTCTCACTCCCTCCACTTCCCATTCCTATCTCTCCCAAACCAGACACTGTTTTCGTTATCCAACAATTAAGTTACTTTCTTTCAACAACAATAACCGTAATAACCACCGCGTCTTCTTTAAAGTCTCAGCTTCATCTTCATCTTCATCTTCATCTTCATCTTCGTTTCAAGCTCTTATATTTGACTGTGACGGCGTCATCTTGGAATCTGAGCACTTACATCGTCAGGCTTATAATGATGCATTTCTTCACTTCAATGTTCGTTCTCCATCTTCTTCTCCTCAACCACTCAACTGGGATATAGAATTCTATGATCAACTTCAGAACCAAATTGGTGGTGGCAAACCCAAAATGCGATGGTACTTTAAGGAACATGGGTGGCCTTCATCAACGTTATTCGAAACTCCTCCTACTAGTGATGAGGAACGAGCCAAGTTGATTGACACTCTTCAGGATTGGAAGACAGAGAGATACAAAGATATAATCAAGTCTGGCTCTGTAAAACCTAGACCAGGAGTTTTGAAATTGATGGATGAAGCCAGAGATGCTGGGAAAAAGCTAGCTGTTTGCTCTGCTGCAACTAAAAGTTCAGTTATTCTTTGTCTTGAAAACCTTATTGGAATTGAGCGCTTTCAAAGCCTTGATTGCTTCCTTGCTGGTGATGATGTGAAGGAAAAGAAGCCCGACCCGTCAATATATGTGACTGCTTCCCAGAAGTTGGGTGTATCAGAGAAAAATTGCTTGGTGGTAGAGGATAGTGTTATTGGTTTACAGGCAGCAACACAAGCAGGGATGTCTTGTGTGGTTACCTACACATCTTCCACCGCTGAGCAGGATTTCAAAGAAGCCATAGCAATCTACCCTGACTTGAGTAACGTAAGCTTGAAAGATTTGGAGTTGCTACTTCAAGATGTTGTAGCTGCTAAATAG

Protein sequence

>Msa0578400

MNKVMMKMNGKWLMNMTMASTLTHTLSLTPSTSHSYLSQTRHCFRYPTIKLLSFNNNNRNNHRVFFKVSASSSSSSSSSSSFQALIFDCDGVILESEHLHRQAYNDAFLHFNVRSPSSSPQPLNWDIEFYDQLQNQIGGGKPKMRWYFKEHGWPSSTLFETPPTSDEERAKLIDTLQDWKTERYKDIIKSGSVKPRPGVLKLMDEARDAGKKLAVCSAATKSSVILCLENLIGIERFQSLDCFLAGDDVKEKKPDPSIYVTASQKLGVSEKNCLVVEDSVIGLQAATQAGMSCVVTYTSSTAEQDFKEAIAIYPDLSNVSLKDLELLLQDVVAAK*