Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166030 | XP_003625904.1 | 93.857 | 293 | 4 | 1 | 1 | 279 | 1 | 293 | 0.0 | 547 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166030 | sp|Q9LHH7|FOLD2_ARATH | 74.913 | 287 | 58 | 1 | 2 | 274 | 9 | 295 | 2.39e-156 | 440 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166030 | B7FKU9 | 93.857 | 293 | 4 | 1 | 1 | 279 | 1 | 293 | 0.0 | 547 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033190 | Msa1166030 | 0.805954 | 1.040054e-49 | -8.615850e-47 |
| Msa0046020 | Msa1166030 | 0.815167 | 1.061937e-51 | -8.615850e-47 |
| Msa0069230 | Msa1166030 | 0.811903 | 5.547582e-51 | -8.615850e-47 |
| Msa0069590 | Msa1166030 | 0.802865 | 4.580650e-49 | -8.615850e-47 |
| Msa0077990 | Msa1166030 | 0.801741 | 7.803444e-49 | -8.615850e-47 |
| Msa0079840 | Msa1166030 | 0.804733 | 1.875173e-49 | -8.615850e-47 |
| Msa0081400 | Msa1166030 | 0.811454 | 6.944227e-51 | -8.615850e-47 |
| Msa0082340 | Msa1166030 | 0.817143 | 3.841709e-52 | -8.615850e-47 |
| Msa0606260 | Msa1166030 | 0.804313 | 2.293510e-49 | -8.615850e-47 |
| Msa0619450 | Msa1166030 | 0.804612 | 1.987364e-49 | -8.615850e-47 |
| Msa0619530 | Msa1166030 | 0.800267 | 1.561873e-48 | -8.615850e-47 |
| Msa0623350 | Msa1166030 | 0.819815 | 9.528563e-53 | -8.615850e-47 |
| Msa0623470 | Msa1166030 | 0.812103 | 5.017228e-51 | -8.615850e-47 |
| Msa0628440 | Msa1166030 | 0.820312 | 7.330866e-53 | -8.615850e-47 |
| Msa0659580 | Msa1166030 | 0.803462 | 3.446704e-49 | -8.615850e-47 |
| Msa0660160 | Msa1166030 | 0.801980 | 6.968358e-49 | -8.615850e-47 |
| Msa0663540 | Msa1166030 | 0.801732 | 7.838179e-49 | -8.615850e-47 |
| Msa0677160 | Msa1166030 | 0.804554 | 2.043447e-49 | -8.615850e-47 |
| Msa0695470 | Msa1166030 | 0.807930 | 3.972958e-50 | -8.615850e-47 |
| Msa0703620 | Msa1166030 | 0.813666 | 2.279990e-51 | -8.615850e-47 |
| Msa0708450 | Msa1166030 | 0.802970 | 4.357512e-49 | -8.615850e-47 |
| Msa0711510 | Msa1166030 | 0.800775 | 1.230109e-48 | -8.615850e-47 |
| Msa0713570 | Msa1166030 | 0.804615 | 1.983759e-49 | -8.615850e-47 |
| Msa0717540 | Msa1166030 | 0.806445 | 8.196339e-50 | -8.615850e-47 |
| Msa0752490 | Msa1166030 | 0.812945 | 3.283012e-51 | -8.615850e-47 |
| Msa0755550 | Msa1166030 | 0.804557 | 2.039742e-49 | -8.615850e-47 |
| Msa0793130 | Msa1166030 | 0.820718 | 5.916528e-53 | -8.615850e-47 |
| Msa0797180 | Msa1166030 | 0.812976 | 3.233311e-51 | -8.615850e-47 |
| Msa0833150 | Msa1166030 | 0.806615 | 7.546509e-50 | -8.615850e-47 |
| Msa0835050 | Msa1166030 | 0.800455 | 1.429478e-48 | -8.615850e-47 |
| Msa0124460 | Msa1166030 | 0.814119 | 1.812148e-51 | -8.615850e-47 |
| Msa0127110 | Msa1166030 | 0.801718 | 7.887487e-49 | -8.615850e-47 |
| Msa0141770 | Msa1166030 | 0.809275 | 2.050412e-50 | -8.615850e-47 |
| Msa0172820 | Msa1166030 | 0.846694 | 1.849263e-59 | -8.615850e-47 |
| Msa0177180 | Msa1166030 | 0.802759 | 4.816961e-49 | -8.615850e-47 |
| Msa0185770 | Msa1166030 | 0.811836 | 5.735334e-51 | -8.615850e-47 |
| Msa0195850 | Msa1166030 | 0.816986 | 4.167731e-52 | -8.615850e-47 |
| Msa0198280 | Msa1166030 | 0.817890 | 2.607584e-52 | -8.615850e-47 |
| Msa0199160 | Msa1166030 | 0.800058 | 1.721828e-48 | -8.615850e-47 |
| Msa0212290 | Msa1166030 | 0.825879 | 3.684860e-54 | -8.615850e-47 |
| Msa0219550 | Msa1166030 | 0.803646 | 3.156976e-49 | -8.615850e-47 |
| Msa0232160 | Msa1166030 | 0.806940 | 6.443000e-50 | -8.615850e-47 |
| Msa0369770 | Msa1166030 | 0.810476 | 1.131271e-50 | -8.615850e-47 |
| Msa0374400 | Msa1166030 | 0.804884 | 1.743698e-49 | -8.615850e-47 |
| Msa0388790 | Msa1166030 | 0.814337 | 1.621770e-51 | -8.615850e-47 |
| Msa0404900 | Msa1166030 | 0.806389 | 8.425000e-50 | -8.615850e-47 |
| Msa0415860 | Msa1166030 | 0.807682 | 4.485404e-50 | -8.615850e-47 |
| Msa0417140 | Msa1166030 | 0.808100 | 3.655332e-50 | -8.615850e-47 |
| Msa0419150 | Msa1166030 | 0.802091 | 6.611583e-49 | -8.615850e-47 |
| Msa0428740 | Msa1166030 | 0.809182 | 2.146937e-50 | -8.615850e-47 |
| Msa0429490 | Msa1166030 | 0.810400 | 1.174578e-50 | -8.615850e-47 |
| Msa0429560 | Msa1166030 | 0.804314 | 2.292140e-49 | -8.615850e-47 |
| Msa0437820 | Msa1166030 | 0.809973 | 1.451858e-50 | -8.615850e-47 |
| Msa0450920 | Msa1166030 | 0.817448 | 3.280507e-52 | -8.615850e-47 |
| Msa0463980 | Msa1166030 | 0.803026 | 4.242409e-49 | -8.615850e-47 |
| Msa0464980 | Msa1166030 | 0.809556 | 1.784719e-50 | -8.615850e-47 |
| Msa0474290 | Msa1166030 | 0.825177 | 5.404445e-54 | -8.615850e-47 |
| Msa1033250 | Msa1166030 | 0.801578 | 8.426319e-49 | -8.615850e-47 |
| Msa1033460 | Msa1166030 | 0.801811 | 7.551197e-49 | -8.615850e-47 |
| Msa1072850 | Msa1166030 | 0.801361 | 9.335975e-49 | -8.615850e-47 |
| Msa1083620 | Msa1166030 | 0.816607 | 5.069247e-52 | -8.615850e-47 |
| Msa0246470 | Msa1166030 | 0.801507 | 8.716389e-49 | -8.615850e-47 |
| Msa0259570 | Msa1166030 | 0.800439 | 1.440499e-48 | -8.615850e-47 |
| Msa0275260 | Msa1166030 | 0.823127 | 1.637337e-53 | -8.615850e-47 |
| Msa0276030 | Msa1166030 | 0.806195 | 9.256263e-50 | -8.615850e-47 |
| Msa0281310 | Msa1166030 | 0.802749 | 4.840953e-49 | -8.615850e-47 |
| Msa0290040 | Msa1166030 | 0.803598 | 3.229982e-49 | -8.615850e-47 |
| Msa0296490 | Msa1166030 | 0.809891 | 1.511979e-50 | -8.615850e-47 |
| Msa0305630 | Msa1166030 | 0.801438 | 9.004816e-49 | -8.615850e-47 |
| Msa0315720 | Msa1166030 | 0.810983 | 8.786062e-51 | -8.615850e-47 |
| Msa0315760 | Msa1166030 | 0.824655 | 7.177221e-54 | -8.615850e-47 |
| Msa0327990 | Msa1166030 | 0.812627 | 3.854631e-51 | -8.615850e-47 |
| Msa0358750 | Msa1166030 | 0.828444 | 8.958480e-55 | -8.615850e-47 |
| Msa1130850 | Msa1166030 | 0.810449 | 1.146246e-50 | -8.615850e-47 |
| Msa1130910 | Msa1166030 | 0.810972 | 8.835872e-51 | -8.615850e-47 |
| Msa1144470 | Msa1166030 | 0.809694 | 1.667277e-50 | -8.615850e-47 |
| Msa1156060 | Msa1166030 | 0.801312 | 9.555839e-49 | -8.615850e-47 |
| Msa1163130 | Msa1166030 | 0.818175 | 2.248531e-52 | -8.615850e-47 |
| Msa1166030 | Msa1175340 | 0.802644 | 5.086566e-49 | -8.615850e-47 |
| Msa1166030 | Msa1175740 | 0.808074 | 3.703179e-50 | -8.615850e-47 |
| Msa1166030 | Msa1206510 | 0.821132 | 4.750198e-53 | -8.615850e-47 |
| Msa1166030 | Msa1223520 | 0.813012 | 3.174246e-51 | -8.615850e-47 |
| Msa1166030 | Msa1225280 | 0.826197 | 3.095642e-54 | -8.615850e-47 |
| Msa1166030 | Msa1244380 | 0.817894 | 2.602466e-52 | -8.615850e-47 |
| Msa1166030 | Msa1245650 | 0.802536 | 5.355035e-49 | -8.615850e-47 |
| Msa1166030 | Msa1263600 | 0.821861 | 3.223277e-53 | -8.615850e-47 |
| Msa1166030 | Msa1277270 | 0.807663 | 4.527602e-50 | -8.615850e-47 |
| Msa1166030 | Msa1298170 | 0.809856 | 1.538629e-50 | -8.615850e-47 |
| Msa1166030 | Msa1360070 | 0.803302 | 3.719988e-49 | -8.615850e-47 |
| Msa1166030 | Msa1373420 | 0.818969 | 1.484782e-52 | -8.615850e-47 |
| Msa1166030 | Msa1381830 | 0.803562 | 3.284841e-49 | -8.615850e-47 |
| Msa1166030 | Msa1396320 | 0.995627 | 3.393563e-218 | -8.615850e-47 |
| Msa1166030 | Msa1401640 | 0.804336 | 2.268722e-49 | -8.615850e-47 |
| Msa1166030 | Msa1405990 | 0.803091 | 4.112489e-49 | -8.615850e-47 |
| Msa1166030 | Msa1411930 | 0.815695 | 8.103946e-52 | -8.615850e-47 |
| Msa1166030 | Msa1414280 | 0.815380 | 9.523391e-52 | -8.615850e-47 |
| Msa1166030 | Msa1419620 | 0.803837 | 2.880884e-49 | -8.615850e-47 |
| Msa1166030 | Msa1424250 | 0.820226 | 7.669794e-53 | -8.615850e-47 |
| Msa1166030 | Msa1428050 | 0.808928 | 2.433876e-50 | -8.615850e-47 |
| Msa1166030 | Msa1452230 | 0.810020 | 1.418696e-50 | -8.615850e-47 |
| Msa1166030 | Msa1457390 | 0.800496 | 1.402703e-48 | -8.615850e-47 |
| Msa1166030 | Msa1459680 | 0.803575 | 3.265144e-49 | -8.615850e-47 |
| Msa0498250 | Msa1166030 | 0.833375 | 5.529098e-56 | -8.615850e-47 |
| Msa0501920 | Msa1166030 | 0.806878 | 6.641080e-50 | -8.615850e-47 |
| Msa0509530 | Msa1166030 | 0.810217 | 1.286114e-50 | -8.615850e-47 |
| Msa0518720 | Msa1166030 | 0.827765 | 1.305709e-54 | -8.615850e-47 |
| Msa0531270 | Msa1166030 | 0.804177 | 2.448072e-49 | -8.615850e-47 |
| Msa0550820 | Msa1166030 | 0.806516 | 7.919380e-50 | -8.615850e-47 |
| Msa0557440 | Msa1166030 | 0.802377 | 5.773838e-49 | -8.615850e-47 |
| Msa0567190 | Msa1166030 | 0.802508 | 5.427746e-49 | -8.615850e-47 |
| Msa0573940 | Msa1166030 | 0.817767 | 2.780371e-52 | -8.615850e-47 |
| Msa0576550 | Msa1166030 | 0.811549 | 6.623699e-51 | -8.615850e-47 |
| Msa0578400 | Msa1166030 | 0.817437 | 3.299489e-52 | -8.615850e-47 |
| Msa0581200 | Msa1166030 | 0.990503 | 6.071569e-183 | -8.615850e-47 |
| Msa0585810 | Msa1166030 | 0.801980 | 6.969269e-49 | -8.615850e-47 |
| Msa0866320 | Msa1166030 | 0.825024 | 5.871695e-54 | -8.615850e-47 |
| Msa0888460 | Msa1166030 | 0.803065 | 4.164275e-49 | -8.615850e-47 |
| Msa0906180 | Msa1166030 | 0.828481 | 8.778430e-55 | -8.615850e-47 |
| Msa0929440 | Msa1166030 | 0.805260 | 1.454277e-49 | -8.615850e-47 |
| Msa0930850 | Msa1166030 | 0.814595 | 1.421916e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166030 | MtrunA17_Chr7g0269111 | 93.857 | 293 | 4 | 1 | 1 | 279 | 1 | 293 | 0.0 | 547 |
| Msa1166030 | MtrunA17_Chr7g0247061 | 62.807 | 285 | 92 | 1 | 4 | 274 | 62 | 346 | 7.64e-130 | 372 |
| Msa1166030 | MtrunA17_Chr1g0160161 | 58.537 | 287 | 105 | 1 | 2 | 274 | 70 | 356 | 6.22e-116 | 337 |
| Msa1166030 | MtrunA17_Chr3g0078501 | 45.810 | 179 | 83 | 1 | 2 | 166 | 73 | 251 | 2.69e-51 | 169 |
| Msa1166030 | MtrunA17_Chr3g0078511 | 61.667 | 60 | 22 | 1 | 217 | 276 | 1 | 59 | 1.60e-18 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166030 | AT3G12290.1 | 74.913 | 287 | 58 | 1 | 2 | 274 | 9 | 295 | 2.43e-157 | 440 |
| Msa1166030 | AT4G00620.1 | 62.718 | 287 | 93 | 1 | 2 | 274 | 69 | 355 | 1.09e-129 | 372 |
| Msa1166030 | AT2G38660.1 | 58.596 | 285 | 104 | 1 | 4 | 274 | 65 | 349 | 8.47e-116 | 337 |
| Msa1166030 | AT2G38660.3 | 58.596 | 285 | 104 | 1 | 4 | 274 | 65 | 349 | 8.47e-116 | 337 |
| Msa1166030 | AT2G38660.4 | 56.126 | 253 | 97 | 1 | 4 | 242 | 65 | 317 | 5.61e-97 | 288 |
| Msa1166030 | AT4G00600.1 | 52.265 | 287 | 87 | 2 | 2 | 274 | 55 | 305 | 2.16e-96 | 286 |
| Msa1166030 | AT2G38660.2 | 55.367 | 177 | 65 | 1 | 4 | 166 | 65 | 241 | 1.30e-63 | 200 |
| Msa1166030 | AT2G38660.7 | 49.495 | 99 | 50 | 0 | 4 | 102 | 65 | 163 | 1.68e-26 | 102 |
| Msa1166030 | AT2G38660.6 | 49.495 | 99 | 50 | 0 | 4 | 102 | 65 | 163 | 1.68e-26 | 102 |
| Msa1166030 | AT2G38660.5 | 49.495 | 99 | 50 | 0 | 4 | 102 | 65 | 163 | 1.68e-26 | 102 |
| Msa1166030 | AT2G38660.8 | 49.495 | 99 | 50 | 0 | 4 | 102 | 65 | 163 | 1.68e-26 | 102 |
Find 94 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTATGTGCTATACTTTAT+TGG | 0.095499 | 7_4:-58048172 | Msa1166030:three_prime_UTR |
| TAACTAGCGCATGGACATTT+TGG | 0.171159 | 7_4:+58047538 | None:intergenic |
| CGAAAAGTTAGTATATTTAT+AGG | 0.211223 | 7_4:-58052387 | None:intergenic |
| TTTCTCTTCATTTATATGTT+TGG | 0.237367 | 7_4:+58051717 | None:intergenic |
| TTCTCTTCATTTATATGTTT+GGG | 0.275577 | 7_4:+58051718 | None:intergenic |
| GAGAAAAGCTTGCGCTGATT+TGG | 0.292482 | 7_4:-58051949 | Msa1166030:CDS |
| GGTTGGATTACTCCTGTTCC+TGG | 0.334532 | 7_4:-58048457 | Msa1166030:CDS |
| CTTTATTGGAATATTGCTTT+TGG | 0.335457 | 7_4:-58048158 | Msa1166030:three_prime_UTR |
| CACGGCTTTGCCGTCAATTA+CGG | 0.340063 | 7_4:+58052195 | None:intergenic |
| AGAAAAGCTTGCGCTGATTT+GGG | 0.341343 | 7_4:-58051948 | Msa1166030:CDS |
| AGCAACATTGTGACTGTCAT+TGG | 0.347400 | 7_4:+58048424 | None:intergenic |
| CAACTAGGAAGGCAGGTTAT+AGG | 0.352622 | 7_4:-58048522 | Msa1166030:CDS |
| GAGGAAGCATCTAAAGTTGC+TGG | 0.352957 | 7_4:-58048478 | Msa1166030:CDS |
| CATCATCATCTTCAGGTTGC+TGG | 0.354269 | 7_4:-58052029 | Msa1166030:intron |
| GAAAAGTTAGTATATTTATA+GGG | 0.359636 | 7_4:-58052386 | None:intergenic |
| TTCAAAAGCAGTAATGAAAC+TGG | 0.393159 | 7_4:+58049222 | None:intergenic |
| AGCATTTACTTTGGGAGTGC+AGG | 0.399690 | 7_4:+58051597 | None:intergenic |
| TCAGCTTCGGAAATTTGTTC+AGG | 0.400499 | 7_4:+58051900 | None:intergenic |
| GCTTCACGTATGATGTCTTC+TGG | 0.403074 | 7_4:+58049156 | None:intergenic |
| TTATATGTGTGCAGGTATAT+TGG | 0.405081 | 7_4:-58051755 | Msa1166030:intron |
| GAGAGGGTCTCTGCCTTTCA+TGG | 0.418461 | 7_4:+58051627 | None:intergenic |
| ACGTATTCTATAAAATTGTA+AGG | 0.419672 | 7_4:-58048265 | Msa1166030:three_prime_UTR |
| AAGGCAGGTTATAGGCTTGT+TGG | 0.427901 | 7_4:-58048514 | Msa1166030:CDS |
| TATAACCTGCCTTCCTAGTT+GGG | 0.428149 | 7_4:+58048524 | None:intergenic |
| TACAGAGGGGAAGAAGAAAT+AGG | 0.431509 | 7_4:+58048064 | None:intergenic |
| CTATAACCTGCCTTCCTAGT+TGG | 0.431628 | 7_4:+58048523 | None:intergenic |
| ATGCTTGATTACTTCAGCTT+CGG | 0.434782 | 7_4:+58051887 | None:intergenic |
| CGCAACCTTCTCCGATCAAA+TGG | 0.435703 | 7_4:-58052221 | Msa1166030:exon |
| TTTCTTAGATCAAGGGAAGT+TGG | 0.440672 | 7_4:-58048597 | Msa1166030:intron |
| GTGTAAGTATAAAGGGGAAA+AGG | 0.444068 | 7_4:-58049281 | Msa1166030:intron |
| AATGTTGCTGAAGAATACTT+TGG | 0.453034 | 7_4:-58048410 | Msa1166030:CDS |
| GGACCTACACCTCCAGGAAC+AGG | 0.460733 | 7_4:+58048445 | None:intergenic |
| GGACTTGCAGTGGTGATAGT+AGG | 0.466821 | 7_4:-58052008 | Msa1166030:CDS |
| AATTACGGTGGCCATTTGAT+CGG | 0.474921 | 7_4:+58052210 | None:intergenic |
| AGCCTTGAGAAGGATGTTGA+TGG | 0.475914 | 7_4:-58051679 | Msa1166030:CDS |
| CGTATCCTCTCTGAGAAATA+CGG | 0.476330 | 7_4:-58052136 | Msa1166030:CDS |
| AGTGACTCACCATGTACATT+GGG | 0.481285 | 7_4:+58051843 | None:intergenic |
| AGAAGAAATAGGTTATATAC+AGG | 0.485771 | 7_4:+58048075 | None:intergenic |
| GATATTGTTATTGCAGCAGC+AGG | 0.488835 | 7_4:-58049132 | Msa1166030:CDS |
| ACATCTATTACTGCAGCTCC+AGG | 0.491120 | 7_4:+58048568 | None:intergenic |
| ACTCCTGTTCCTGGAGGTGT+AGG | 0.496506 | 7_4:-58048448 | Msa1166030:CDS |
| TGTTATTGCAGCAGCAGGAC+AGG | 0.498986 | 7_4:-58049127 | Msa1166030:CDS |
| CGTATTTCTCAGAGAGGATA+CGG | 0.500459 | 7_4:+58052137 | None:intergenic |
| GTCACGTGGCGCAAATTAAG+TGG | 0.508820 | 7_4:-58047482 | Msa1166030:three_prime_UTR |
| ATCGGCAAGCTTGCCATGAA+AGG | 0.510148 | 7_4:-58051640 | Msa1166030:CDS |
| GGCTTTCATCCTTTGAACAT+CGG | 0.514273 | 7_4:-58051658 | Msa1166030:CDS |
| TCATTTATATGTTTGGGCAG+TGG | 0.514441 | 7_4:+58051724 | None:intergenic |
| TGTAAGTATAAAGGGGAAAA+GGG | 0.521694 | 7_4:-58049280 | Msa1166030:intron |
| GACTGAAATCAGCCTTGAGA+AGG | 0.525446 | 7_4:-58051689 | Msa1166030:CDS |
| GACTTGCAGTGGTGATAGTA+GGG | 0.525562 | 7_4:-58052007 | Msa1166030:CDS |
| GGGAAAAGGGCAGTTGTGGT+TGG | 0.536435 | 7_4:-58049267 | Msa1166030:CDS |
| TTGGTAGAAGCAACATAGTC+GGG | 0.537576 | 7_4:-58049248 | Msa1166030:CDS |
| GCATTTACTTTGGGAGTGCA+GGG | 0.540237 | 7_4:+58051598 | None:intergenic |
| AGCAGCAGGACAGGCAAAGA+TGG | 0.543320 | 7_4:-58049118 | Msa1166030:intron |
| GGTGGCCATTTGATCGGAGA+AGG | 0.543368 | 7_4:+58052216 | None:intergenic |
| GCAAGCTTGCCGATGTTCAA+AGG | 0.547348 | 7_4:+58051649 | None:intergenic |
| CTTCGGAAATTTGTTCAGGA+AGG | 0.547633 | 7_4:+58051904 | None:intergenic |
| AGATCGGATTGTTTGTGCCA+CGG | 0.550515 | 7_4:+58052177 | None:intergenic |
| GATGACCCAACTAGGAAGGC+AGG | 0.556133 | 7_4:-58048529 | Msa1166030:CDS |
| AAGCATCTAAAGTTGCTGGT+TGG | 0.557994 | 7_4:-58048474 | Msa1166030:CDS |
| ATTCTGTTGATGACCCAACT+AGG | 0.559417 | 7_4:-58048537 | Msa1166030:CDS |
| GTCATTGGACCTACACCTCC+AGG | 0.563478 | 7_4:+58048439 | None:intergenic |
| AAGTGACTCACCATGTACAT+TGG | 0.565737 | 7_4:+58051842 | None:intergenic |
| AAAGGGGAAAAGGGCAGTTG+TGG | 0.567603 | 7_4:-58049271 | Msa1166030:intron |
| TCAGGTTGCTGGACTTGCAG+TGG | 0.572590 | 7_4:-58052018 | Msa1166030:intron |
| CAAATGGCCACCGTAATTGA+CGG | 0.574064 | 7_4:-58052205 | Msa1166030:CDS |
| GTTGGTAGAAGCAACATAGT+CGG | 0.574369 | 7_4:-58049249 | Msa1166030:CDS |
| AGCCATCAACATCCTTCTCA+AGG | 0.583414 | 7_4:+58051677 | None:intergenic |
| CCTCGTCGGCGATTTCAGAT+CGG | 0.583482 | 7_4:+58052161 | None:intergenic |
| AAGGGAAGTTGGATAAAACC+TGG | 0.587815 | 7_4:-58048586 | Msa1166030:CDS |
| TGCGCTAGTTAACTAGCGCA+TGG | 0.589831 | 7_4:+58047529 | None:intergenic |
| TGTTGATGACCCAACTAGGA+AGG | 0.598349 | 7_4:-58048533 | Msa1166030:CDS |
| GGAGTGCAGGGAACAAAGAG+AGG | 0.599700 | 7_4:+58051610 | None:intergenic |
| CGTATTCTATAAAATTGTAA+GGG | 0.603359 | 7_4:-58048264 | Msa1166030:three_prime_UTR |
| TTCTATAAAATTGTAAGGGT+AGG | 0.607410 | 7_4:-58048260 | Msa1166030:three_prime_UTR |
| TAGCACATACAGAGAACAAG+AGG | 0.609611 | 7_4:+58048183 | None:intergenic |
| GGCGCAAATTAAGTGGCGCA+AGG | 0.612096 | 7_4:-58047475 | Msa1166030:three_prime_UTR |
| GGCTTTGCCGTCAATTACGG+TGG | 0.613849 | 7_4:+58052198 | None:intergenic |
| AACGCTGATCCCAATGTACA+TGG | 0.616668 | 7_4:-58051852 | Msa1166030:intron |
| TTTGTGAGAGTTAAATTGGG+TGG | 0.624251 | 7_4:-58052314 | Msa1166030:five_prime_UTR |
| CGTAATTGACGGCAAAGCCG+TGG | 0.631640 | 7_4:-58052194 | Msa1166030:CDS |
| CCGATCTGAAATCGCCGACG+AGG | 0.637149 | 7_4:-58052161 | Msa1166030:CDS |
| TGGATTACTCCTGTTCCTGG+AGG | 0.641207 | 7_4:-58048454 | Msa1166030:CDS |
| CCTTGCCGTATTTCTCAGAG+AGG | 0.642605 | 7_4:+58052131 | None:intergenic |
| CCTCTCTGAGAAATACGGCA+AGG | 0.642652 | 7_4:-58052131 | Msa1166030:intron |
| GCAAATTAAGTGGCGCAAGG+TGG | 0.643864 | 7_4:-58047472 | Msa1166030:three_prime_UTR |
| GGAGCTGCAGTAATAGATGT+CGG | 0.646250 | 7_4:-58048565 | Msa1166030:CDS |
| ACTTGTGTGTGAATGAGCAA+TGG | 0.673957 | 7_4:+58049182 | None:intergenic |
| AGAGAGGATACGGACCTCGT+CGG | 0.680772 | 7_4:+58052147 | None:intergenic |
| GAGTGCAGGGAACAAAGAGA+GGG | 0.687238 | 7_4:+58051611 | None:intergenic |
| AGCACATACAGAGAACAAGA+GGG | 0.699285 | 7_4:+58048184 | None:intergenic |
| AATGCGCAATTTAAGTCACG+TGG | 0.705378 | 7_4:-58047496 | Msa1166030:three_prime_UTR |
| GCACATACAGAGAACAAGAG+GGG | 0.710443 | 7_4:+58048185 | None:intergenic |
| TCTTAGCAGAAACTGAACTG+AGG | 0.714720 | 7_4:+58048295 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTATGACATTTTTTATA+GGG | + | chr7_4:58047508-58047527 | None:intergenic | 10.0% |
| !!! | AATTAGTTTATAATTATGAA+TGG | - | chr7_4:58048462-58048481 | Msa1166030:CDS | 10.0% |
| !!! | GTTTAATATTATATTTTCAT+AGG | - | chr7_4:58050921-58050940 | Msa1166030:intron | 10.0% |
| !!! | TTCCTTTAATTTTAAATAAA+AGG | - | chr7_4:58051501-58051520 | Msa1166030:intron | 10.0% |
| !!! | TCCTTTAATTTTAAATAAAA+GGG | - | chr7_4:58051502-58051521 | Msa1166030:intron | 10.0% |
| !!! | GTAATTATGACATTTTTTAT+AGG | + | chr7_4:58047509-58047528 | None:intergenic | 15.0% |
| !!! | TCTTTTTTACTGTATTTATT+TGG | - | chr7_4:58048062-58048081 | Msa1166030:intron | 15.0% |
| !! | AAAAAATCAATTAAGATTAC+TGG | - | chr7_4:58048515-58048534 | Msa1166030:CDS | 15.0% |
| !! | AAAAATCAATTAAGATTACT+GGG | - | chr7_4:58048516-58048535 | Msa1166030:CDS | 15.0% |
| !! | TTAAATACACTATTTAAAGA+AGG | + | chr7_4:58050498-58050517 | None:intergenic | 15.0% |
| !!! | TTTTTAAAAAAACATAGACT+TGG | + | chr7_4:58050799-58050818 | None:intergenic | 15.0% |
| !!! | TTTTTGTCAATTTTCAAATT+TGG | - | chr7_4:58050839-58050858 | Msa1166030:intron | 15.0% |
| !!! | TCCCTTTTATTTAAAATTAA+AGG | + | chr7_4:58051506-58051525 | None:intergenic | 15.0% |
| !!! | ATTTTTTGTGAGAGTTAAAT+TGG | - | chr7_4:58047533-58047552 | Msa1166030:three_prime_UTR | 20.0% |
| !!! | TTTTTTGTGAGAGTTAAATT+GGG | - | chr7_4:58047534-58047553 | Msa1166030:three_prime_UTR | 20.0% |
| !! | TTCTCTTCATTTATATGTTT+GGG | + | chr7_4:58048136-58048155 | None:intergenic | 20.0% |
| !! | TTTCTCTTCATTTATATGTT+TGG | + | chr7_4:58048137-58048156 | None:intergenic | 20.0% |
| !! | ATTATGAATGGCATAAAAAA+TGG | - | chr7_4:58048474-58048493 | Msa1166030:CDS | 20.0% |
| !! | AAAATCAATTAAGATTACTG+GGG | - | chr7_4:58048517-58048536 | Msa1166030:CDS | 20.0% |
| !! | TAAAAAAATAAACATGTGAG+TGG | + | chr7_4:58048760-58048779 | None:intergenic | 20.0% |
| !!! | TTTTGAACTACTTTCTTTAA+AGG | - | chr7_4:58049233-58049252 | Msa1166030:CDS | 20.0% |
| !!! | TTTTAAGTGATTAAACTTTG+CGG | - | chr7_4:58050393-58050412 | Msa1166030:intron | 20.0% |
| !!! | ACGCATAAATAGTTTTTAAA+TGG | - | chr7_4:58050888-58050907 | Msa1166030:intron | 20.0% |
| !!! | AAATAGTTTTTAAATGGTAG+CGG | - | chr7_4:58050894-58050913 | Msa1166030:intron | 20.0% |
| !! | AAATGAATGATATATAAGAG+TGG | - | chr7_4:58050988-58051007 | Msa1166030:intron | 20.0% |
| !!! | AATTTTCTAAAACTGTGTTT+TGG | + | chr7_4:58051155-58051174 | None:intergenic | 20.0% |
| !!! | ATTTACTTTTTCTTAGATCA+AGG | - | chr7_4:58051246-58051265 | Msa1166030:intron | 20.0% |
| !!! | TTTACTTTTTCTTAGATCAA+GGG | - | chr7_4:58051247-58051266 | Msa1166030:intron | 20.0% |
| !! | ACGTATTCTATAAAATTGTA+AGG | - | chr7_4:58051586-58051605 | Msa1166030:intron | 20.0% |
| !! | CGTATTCTATAAAATTGTAA+GGG | - | chr7_4:58051587-58051606 | Msa1166030:intron | 20.0% |
| !!! | TTCTTCTTTTTATAACAAAG+AGG | + | chr7_4:58051823-58051842 | None:intergenic | 20.0% |
| !!! | TTCTTCTTTTTATAACAAAG+AGG | + | chr7_4:58051823-58051842 | None:intergenic | 20.0% |
| !!! | TTCTTCTTTTTATAACAAAG+AGG | + | chr7_4:58051823-58051842 | None:intergenic | 20.0% |
| ! | TTCAACTCAATTCTATCAAT+AGG | - | chr7_4:58048299-58048318 | Msa1166030:three_prime_UTR | 25.0% |
| ! | TATCAATAGGAAAATAATCC+AGG | - | chr7_4:58048312-58048331 | Msa1166030:three_prime_UTR | 25.0% |
| !! | TTTTGCTAGCTAAATTAGAA+CGG | - | chr7_4:58048831-58048850 | Msa1166030:intron | 25.0% |
| ! | TTAAGTGATTAAACTTTGCA+GGG | + | chr7_4:58049337-58049356 | None:intergenic | 25.0% |
| ! | TTTAAGTGATTAAACTTTGC+AGG | + | chr7_4:58050394-58050413 | None:intergenic | 25.0% |
| ! | ACAACATCAAAATCATATTC+CGG | - | chr7_4:58050031-58050050 | Msa1166030:intron | 25.0% |
| ! | TTTAAGTGATTAAACTTTGC+GGG | - | chr7_4:58050394-58050413 | Msa1166030:intron | 25.0% |
| !! | TGTCAATTTTCAAATTTGGA+TGG | - | chr7_4:58050843-58050862 | Msa1166030:intron | 25.0% |
| ! | TTAGCTCAATATAATTGATG+TGG | + | chr7_4:58050970-58050989 | None:intergenic | 25.0% |
| ! | TTGAGAAGATTAATAACAGT+GGG | + | chr7_4:58051213-58051232 | None:intergenic | 25.0% |
| ! | ATTGAGAAGATTAATAACAG+TGG | + | chr7_4:58051214-58051233 | None:intergenic | 25.0% |
| ! | TTCTATAAAATTGTAAGGGT+AGG | - | chr7_4:58051591-58051610 | Msa1166030:intron | 25.0% |
| !! | CTTTATTGGAATATTGCTTT+TGG | - | chr7_4:58051693-58051712 | Msa1166030:CDS | 25.0% |
| ! | AGAAGAAATAGGTTATATAC+AGG | + | chr7_4:58051779-58051798 | None:intergenic | 25.0% |
| ! | ATAAAGTATAGCACATACTT+GGG | + | chr7_4:58051891-58051910 | None:intergenic | 25.0% |
| ! | AATAAAGTATAGCACATACT+TGG | + | chr7_4:58051892-58051911 | None:intergenic | 25.0% |
| ! | AAGTATGTGCTATACTTTAT+TGG | - | chr7_4:58051891-58051910 | Msa1166030:CDS | 25.0% |
| !! | CTTTATTGGAATATTGCTTT+TGG | - | chr7_4:58051693-58051712 | Msa1166030:CDS | 25.0% |
| ! | AGAAGAAATAGGTTATATAC+AGG | + | chr7_4:58051779-58051798 | None:intergenic | 25.0% |
| ! | ATAAAGTATAGCACATACTT+GGG | + | chr7_4:58051891-58051910 | None:intergenic | 25.0% |
| ! | AATAAAGTATAGCACATACT+TGG | + | chr7_4:58051892-58051911 | None:intergenic | 25.0% |
| ! | AAGTATGTGCTATACTTTAT+TGG | - | chr7_4:58051891-58051910 | Msa1166030:CDS | 25.0% |
| !! | CTTTATTGGAATATTGCTTT+TGG | - | chr7_4:58051693-58051712 | Msa1166030:CDS | 25.0% |
| ! | AGAAGAAATAGGTTATATAC+AGG | + | chr7_4:58051779-58051798 | None:intergenic | 25.0% |
| AAGATGATGAAGGAATGATT+GGG | + | chr7_4:58047753-58047772 | None:intergenic | 30.0% | |
| TTATATGTGTGCAGGTATAT+TGG | - | chr7_4:58048096-58048115 | Msa1166030:three_prime_UTR | 30.0% | |
| !! | GAATGAAGAGCATTTACTTT+GGG | + | chr7_4:58048265-58048284 | None:intergenic | 30.0% |
| !! | AGAATGAAGAGCATTTACTT+TGG | + | chr7_4:58048266-58048285 | None:intergenic | 30.0% |
| ! | CTCTTCATTCTCAAATCTTT+TGG | - | chr7_4:58048275-58048294 | Msa1166030:three_prime_UTR | 30.0% |
| GCTCTGTTTGGTAAAAATAA+TGG | - | chr7_4:58048334-58048353 | Msa1166030:three_prime_UTR | 30.0% | |
| !! | AAGCTAACTATAGTTGATAG+CGG | - | chr7_4:58048392-58048411 | Msa1166030:CDS | 30.0% |
| CTGATTGAATTTGTAGTGTT+TGG | - | chr7_4:58048424-58048443 | Msa1166030:CDS | 30.0% | |
| GTAGTGTTTGGTAAAATTAG+CGG | - | chr7_4:58048436-58048455 | Msa1166030:CDS | 30.0% | |
| TAGTGTTTGGTAAAATTAGC+GGG | - | chr7_4:58048437-58048456 | Msa1166030:CDS | 30.0% | |
| TGTCTTATAATCTCGTATGT+TGG | + | chr7_4:58048686-58048705 | None:intergenic | 30.0% | |
| TAAGACATAAGCTATAAGCT+CGG | - | chr7_4:58048699-58048718 | Msa1166030:intron | 30.0% | |
| TTTGCTAGCTAAATTAGAAC+GGG | - | chr7_4:58048832-58048851 | Msa1166030:intron | 30.0% | |
| ! | TTAATGCACAGTTTTCATTG+AGG | - | chr7_4:58048916-58048935 | Msa1166030:intron | 30.0% |
| TAAGTGATTAAACTTTGCAG+GGG | + | chr7_4:58049336-58049355 | None:intergenic | 30.0% | |
| !!! | ATTTTGCTAATTTGATGACG+TGG | + | chr7_4:58049390-58049409 | None:intergenic | 30.0% |
| ACGTCATCAAATTAGCAAAA+TGG | - | chr7_4:58049389-58049408 | Msa1166030:intron | 30.0% | |
| ATCAAATTAGCAAAATGGCA+TGG | - | chr7_4:58049394-58049413 | Msa1166030:intron | 30.0% | |
| TCAAATTAGCAAAATGGCAT+GGG | - | chr7_4:58049395-58049414 | Msa1166030:intron | 30.0% | |
| AGAAAAGAAAATGATAGCAG+GGG | + | chr7_4:58049478-58049497 | None:intergenic | 30.0% | |
| GAGAAAAGAAAATGATAGCA+GGG | + | chr7_4:58049479-58049498 | None:intergenic | 30.0% | |
| AGAGAAAAGAAAATGATAGC+AGG | + | chr7_4:58049480-58049499 | None:intergenic | 30.0% | |
| TACTGTATTGTAGATTCAAG+AGG | + | chr7_4:58049616-58049635 | None:intergenic | 30.0% | |
| TTCTTTGCAAGATGAATTAG+TGG | - | chr7_4:58049688-58049707 | Msa1166030:intron | 30.0% | |
| AGGAAGAAAATTGAAGAACA+CGG | - | chr7_4:58049768-58049787 | Msa1166030:intron | 30.0% | |
| ! | TCATTTTGCACAATCATCTT+CGG | + | chr7_4:58050136-58050155 | None:intergenic | 30.0% |
| AGATGATTGTGCAAAATGAA+TGG | - | chr7_4:58050137-58050156 | Msa1166030:intron | 30.0% | |
| !! | GTAAAACAGATTGATGATGA+TGG | - | chr7_4:58050208-58050227 | Msa1166030:intron | 30.0% |
| CCATGATTGAAGAATAAACA+TGG | + | chr7_4:58050249-58050268 | None:intergenic | 30.0% | |
| CCATGTTTATTCTTCAATCA+TGG | - | chr7_4:58050246-58050265 | Msa1166030:intron | 30.0% | |
| GAGAAAGAAGATGAAATCAA+GGG | - | chr7_4:58050287-58050306 | Msa1166030:intron | 30.0% | |
| ATTTCACAGACAAACATGAA+AGG | + | chr7_4:58050322-58050341 | None:intergenic | 30.0% | |
| TTAAGTGATTAAACTTTGCG+GGG | - | chr7_4:58050395-58050414 | Msa1166030:intron | 30.0% | |
| ! | TACATATGCTACTTGTATTC+AGG | - | chr7_4:58050520-58050539 | Msa1166030:intron | 30.0% |
| TGTAAGTATAAAGGGGAAAA+GGG | - | chr7_4:58050571-58050590 | Msa1166030:intron | 30.0% | |
| TTCAAAAGCAGTAATGAAAC+TGG | + | chr7_4:58050632-58050651 | None:intergenic | 30.0% | |
| ACAAAAACTGCACATATACT+AGG | + | chr7_4:58050826-58050845 | None:intergenic | 30.0% | |
| AAATTTGGATGGTTCTTTCT+TGG | - | chr7_4:58050854-58050873 | Msa1166030:intron | 30.0% | |
| CAATATAATTGATGTGGAAC+TGG | + | chr7_4:58050964-58050983 | None:intergenic | 30.0% | |
| !!! | ACTCAAGTTTTAAACTTGAG+TGG | - | chr7_4:58051021-58051040 | Msa1166030:intron | 30.0% |
| AATATCATTGAGAGCAACAA+CGG | + | chr7_4:58051090-58051109 | None:intergenic | 30.0% | |
| GATATTCCTATAAACGACAT+TGG | - | chr7_4:58051104-58051123 | Msa1166030:intron | 30.0% | |
| ! | CATATACCAATGTCGTTTAT+AGG | + | chr7_4:58051113-58051132 | None:intergenic | 30.0% |
| AATGTTGCTGAAGAATACTT+TGG | - | chr7_4:58051441-58051460 | Msa1166030:intron | 30.0% | |
| CTGTATGTGCTATACTTTAT+TGG | - | chr7_4:58051679-58051698 | Msa1166030:CDS | 30.0% | |
| ! | TTTTATAACAAAGAGGTTGC+AGG | + | chr7_4:58051816-58051835 | None:intergenic | 30.0% |
| ! | TTTTATAACAAAGAGGTTGC+AGG | + | chr7_4:58051816-58051835 | None:intergenic | 30.0% |
| ! | TTTTATAACAAAGAGGTTGC+AGG | + | chr7_4:58051816-58051835 | None:intergenic | 30.0% |
| TTTGTGAGAGTTAAATTGGG+TGG | - | chr7_4:58047537-58047556 | Msa1166030:three_prime_UTR | 35.0% | |
| GAAGATGATGAAGGAATGAT+TGG | + | chr7_4:58047754-58047773 | None:intergenic | 35.0% | |
| TCATCATCATCATCATCTTC+AGG | - | chr7_4:58047815-58047834 | Msa1166030:intron | 35.0% | |
| ATGCTTGATTACTTCAGCTT+CGG | + | chr7_4:58047967-58047986 | None:intergenic | 35.0% | |
| !! | GTTTGTTGTTATATGTGTGC+AGG | - | chr7_4:58048088-58048107 | Msa1166030:three_prime_UTR | 35.0% |
| TCATTTATATGTTTGGGCAG+TGG | + | chr7_4:58048130-58048149 | None:intergenic | 35.0% | |
| AAAATAATCCAGGCTCTGTT+TGG | - | chr7_4:58048322-58048341 | Msa1166030:three_prime_UTR | 35.0% | |
| !! | TATTTTTACCAAACAGAGCC+TGG | + | chr7_4:58048333-58048352 | None:intergenic | 35.0% |
| !! | GCTCACAAACTAGCTTATTT+TGG | - | chr7_4:58048360-58048379 | Msa1166030:exon | 35.0% |
| !!! | CTAGCTTATTTTGGATGACT+TGG | - | chr7_4:58048369-58048388 | Msa1166030:exon | 35.0% |
| GAAAGTGACAATTACCAAAC+AGG | - | chr7_4:58048649-58048668 | Msa1166030:intron | 35.0% | |
| TAGCTAAATTAGAACGGGAT+AGG | - | chr7_4:58048837-58048856 | Msa1166030:intron | 35.0% | |
| GAAAACTGTGCATTAATGAC+AGG | + | chr7_4:58048912-58048931 | None:intergenic | 35.0% | |
| TGTAATTGTGCGTTCTTGAT+CGG | + | chr7_4:58049207-58049226 | None:intergenic | 35.0% | |
| ! | AAAAAGGATTAGCGATTGCA+GGG | + | chr7_4:58050423-58050442 | None:intergenic | 35.0% |
| ! | AAAAAAGGATTAGCGATTGC+AGG | + | chr7_4:58050422-58050441 | None:intergenic | 35.0% |
| ATACTTTGCTTAGTCAACGA+GGG | + | chr7_4:58049435-58049454 | None:intergenic | 35.0% | |
| AAGAAGGAAGAAGAAGGTAA+TGG | + | chr7_4:58049518-58049537 | None:intergenic | 35.0% | |
| AGAAGAAAGAAGGAAGAAGA+AGG | + | chr7_4:58049524-58049543 | None:intergenic | 35.0% | |
| CAAAGAATCAAATCCACACT+TGG | + | chr7_4:58049675-58049694 | None:intergenic | 35.0% | |
| TTGCAAGATGAATTAGTGGT+TGG | - | chr7_4:58049692-58049711 | Msa1166030:intron | 35.0% | |
| TGCAAGATGAATTAGTGGTT+GGG | - | chr7_4:58049693-58049712 | Msa1166030:intron | 35.0% | |
| !! | TGGTTGGGTTTTGATGTTTT+GGG | - | chr7_4:58049708-58049727 | Msa1166030:intron | 35.0% |
| !!! | CTTTCGATGATGTTGTTTTG+CGG | + | chr7_4:58050060-58050079 | None:intergenic | 35.0% |
| ! | TGAAATCGTGTTGCAGTTTT+CGG | - | chr7_4:58050085-58050104 | Msa1166030:intron | 35.0% |
| TGTGCAAAATGAATGGTGAA+TGG | - | chr7_4:58050144-58050163 | Msa1166030:intron | 35.0% | |
| GTGCAAAATGAATGGTGAAT+GGG | - | chr7_4:58050145-58050164 | Msa1166030:intron | 35.0% | |
| GGTGTAAAACAGATTGATGA+TGG | - | chr7_4:58050184-58050203 | Msa1166030:intron | 35.0% | |
| GGAGAAAGAAGATGAAATCA+AGG | - | chr7_4:58050286-58050305 | Msa1166030:intron | 35.0% | |
| !! | CAGATGTTAATTTGATGACG+TGG | - | chr7_4:58050342-58050361 | Msa1166030:intron | 35.0% |
| TAAGTGATTAAACTTTGCGG+GGG | - | chr7_4:58050396-58050415 | Msa1166030:intron | 35.0% | |
| ! | AAAAAAGGATTAGCGATTGC+AGG | - | chr7_4:58050422-58050441 | Msa1166030:intron | 35.0% |
| ! | AAAAAGGATTAGCGATTGCA+GGG | - | chr7_4:58050423-58050442 | Msa1166030:intron | 35.0% |
| ! | TTTTTCGTCCCTGTAAATAG+GGG | + | chr7_4:58050465-58050484 | None:intergenic | 35.0% |
| ! | GTTTTTCGTCCCTGTAAATA+GGG | + | chr7_4:58050466-58050485 | None:intergenic | 35.0% |
| ! | TGTTTTTCGTCCCTGTAAAT+AGG | + | chr7_4:58050467-58050486 | None:intergenic | 35.0% |
| ACGAAGTGGTGTAAGTATAA+AGG | - | chr7_4:58050562-58050581 | Msa1166030:intron | 35.0% | |
| CGAAGTGGTGTAAGTATAAA+GGG | - | chr7_4:58050563-58050582 | Msa1166030:intron | 35.0% | |
| GAAGTGGTGTAAGTATAAAG+GGG | - | chr7_4:58050564-58050583 | Msa1166030:intron | 35.0% | |
| GTGTAAGTATAAAGGGGAAA+AGG | - | chr7_4:58050570-58050589 | Msa1166030:intron | 35.0% | |
| TAAACTTGAGTGGAGATATG+CGG | - | chr7_4:58051031-58051050 | Msa1166030:intron | 35.0% | |
| !!! | TAACAGTGGGCTATATTTTC+TGG | + | chr7_4:58051200-58051219 | None:intergenic | 35.0% |
| TTTCTTAGATCAAGGGAAGT+TGG | - | chr7_4:58051254-58051273 | Msa1166030:intron | 35.0% | |
| ! | TGTTGGAGATGTAGATTTTG+AGG | - | chr7_4:58051354-58051373 | Msa1166030:intron | 35.0% |
| AATTACGGTGGCCATTTGAT+CGG | + | chr7_4:58047644-58047663 | None:intergenic | 40.0% | |
| CGTATTTCTCAGAGAGGATA+CGG | + | chr7_4:58047717-58047736 | None:intergenic | 40.0% | |
| ! | CGTATCCTCTCTGAGAAATA+CGG | - | chr7_4:58047715-58047734 | Msa1166030:intron | 40.0% |
| AATCTCGCGAGAAATTGGAA+GGG | + | chr7_4:58047794-58047813 | None:intergenic | 40.0% | |
| ATGAGAATCTCGCGAGAAAT+TGG | + | chr7_4:58047799-58047818 | None:intergenic | 40.0% | |
| !! | AGAAAAGCTTGCGCTGATTT+GGG | - | chr7_4:58047903-58047922 | Msa1166030:intron | 40.0% |
| ! | CTTCGGAAATTTGTTCAGGA+AGG | + | chr7_4:58047950-58047969 | None:intergenic | 40.0% |
| ! | TCAGCTTCGGAAATTTGTTC+AGG | + | chr7_4:58047954-58047973 | None:intergenic | 40.0% |
| AGTGACTCACCATGTACATT+GGG | + | chr7_4:58048011-58048030 | None:intergenic | 40.0% | |
| AAGTGACTCACCATGTACAT+TGG | + | chr7_4:58048012-58048031 | None:intergenic | 40.0% | |
| GGCTTTCATCCTTTGAACAT+CGG | - | chr7_4:58048193-58048212 | Msa1166030:three_prime_UTR | 40.0% | |
| ATGTGAGTGGAATTCATCGA+GGG | + | chr7_4:58048747-58048766 | None:intergenic | 40.0% | |
| AAATGACTCTTCGCATGAGT+AGG | + | chr7_4:58049032-58049051 | None:intergenic | 40.0% | |
| TATTGTAACAACCTTCCCAC+AGG | + | chr7_4:58049148-58049167 | None:intergenic | 40.0% | |
| ! | TGTTTTTCGTCCCTGCAAAT+AGG | - | chr7_4:58049264-58049283 | Msa1166030:CDS | 40.0% |
| ! | GTTTTTCGTCCCTGCAAATA+GGG | - | chr7_4:58049265-58049284 | Msa1166030:CDS | 40.0% |
| ! | TTTTTCGTCCCTGCAAATAG+GGG | - | chr7_4:58049266-58049285 | Msa1166030:CDS | 40.0% |
| CTTTGCAGGGGCAAAAAAAA+AGG | + | chr7_4:58049324-58049343 | None:intergenic | 40.0% | |
| !! | GCATTGATTAACTGGGTCAA+GGG | + | chr7_4:58050364-58050383 | None:intergenic | 40.0% |
| !! | TGACGTGGCATTGATTAACT+GGG | + | chr7_4:58050357-58050376 | None:intergenic | 40.0% |
| !! | ATGACGTGGCATTGATTAAC+TGG | + | chr7_4:58050356-58050375 | None:intergenic | 40.0% |
| TTAGCAAAATGGCATGGGAA+TGG | - | chr7_4:58049400-58049419 | Msa1166030:intron | 40.0% | |
| CATACTTTGCTTAGTCAACG+AGG | + | chr7_4:58049436-58049455 | None:intergenic | 40.0% | |
| ! | CTCGTTGACTAAGCAAAGTA+TGG | - | chr7_4:58049434-58049453 | Msa1166030:intron | 40.0% |
| ! | AAGGAAGAAGAAGGTAATGG+TGG | + | chr7_4:58049515-58049534 | None:intergenic | 40.0% |
| ! | ATTGCTGTTGCTATTGCTGT+TGG | + | chr7_4:58049566-58049585 | None:intergenic | 40.0% |
| !! | CACTTGGTTTGTTAAGCTTC+TGG | + | chr7_4:58049659-58049678 | None:intergenic | 40.0% |
| GAAGCTTAACAAACCAAGTG+TGG | - | chr7_4:58049659-58049678 | Msa1166030:intron | 40.0% | |
| !! | GTGGTTGGGTTTTGATGTTT+TGG | - | chr7_4:58049707-58049726 | Msa1166030:intron | 40.0% |
| !!! | GGTTTTGATGTTTTGGGACA+CGG | - | chr7_4:58049714-58049733 | Msa1166030:intron | 40.0% |
| GAGAAGAGGATGAAGAAGAA+AGG | - | chr7_4:58049748-58049767 | Msa1166030:intron | 40.0% | |
| AAATTGAAGAACACGGTCAC+AGG | - | chr7_4:58049775-58049794 | Msa1166030:intron | 40.0% | |
| !!! | TGATGTTGTTTTGCGGTTAC+CGG | + | chr7_4:58050053-58050072 | None:intergenic | 40.0% |
| TGAATGGTGAATGGGATTGT+AGG | - | chr7_4:58050153-58050172 | Msa1166030:intron | 40.0% | |
| ATGGGATTGTAGGACAATGA+AGG | - | chr7_4:58050163-58050182 | Msa1166030:intron | 40.0% | |
| ATGGAACACGAGAAAGAAGA+GGG | - | chr7_4:58050265-58050284 | Msa1166030:intron | 40.0% | |
| !! | ATGACGTGGCATTGATTAAC+TGG | - | chr7_4:58050356-58050375 | Msa1166030:intron | 40.0% |
| !! | TGACGTGGCATTGATTAACT+GGG | - | chr7_4:58050357-58050376 | Msa1166030:intron | 40.0% |
| !! | GCATTGATTAACTGGGTCAA+GGG | - | chr7_4:58050364-58050383 | Msa1166030:intron | 40.0% |
| TTTAAGCGACCCCTATTTAC+AGG | - | chr7_4:58050453-58050472 | Msa1166030:intron | 40.0% | |
| TTAAGCGACCCCTATTTACA+GGG | - | chr7_4:58050454-58050473 | Msa1166030:intron | 40.0% | |
| CTTGAACTATTGTCACGAAG+TGG | - | chr7_4:58050548-58050567 | Msa1166030:intron | 40.0% | |
| ! | GTTGGTAGAAGCAACATAGT+CGG | - | chr7_4:58050602-58050621 | Msa1166030:intron | 40.0% |
| TTGGTAGAAGCAACATAGTC+GGG | - | chr7_4:58050603-58050622 | Msa1166030:intron | 40.0% | |
| !! | GCTTTTGAAAGCAGATGCTA+CGG | - | chr7_4:58050643-58050662 | Msa1166030:intron | 40.0% |
| ACTTGTGTGTGAATGAGCAA+TGG | + | chr7_4:58050672-58050691 | None:intergenic | 40.0% | |
| ! | GATATTGTTATTGCAGCAGC+AGG | - | chr7_4:58050719-58050738 | Msa1166030:intron | 40.0% |
| CATAGGAACCTAAGTGTTTG+TGG | - | chr7_4:58050938-58050957 | Msa1166030:intron | 40.0% | |
| ATCAAGATTGTCAAGAGAGC+TGG | + | chr7_4:58051060-58051079 | None:intergenic | 40.0% | |
| !!! | GCTATATTTTCTGGAGTGTG+AGG | + | chr7_4:58051191-58051210 | None:intergenic | 40.0% |
| AAGGGAAGTTGGATAAAACC+TGG | - | chr7_4:58051265-58051284 | Msa1166030:intron | 40.0% | |
| !! | ATTCTGTTGATGACCCAACT+AGG | - | chr7_4:58051314-58051333 | Msa1166030:intron | 40.0% |
| TATAACCTGCCTTCCTAGTT+GGG | + | chr7_4:58051330-58051349 | None:intergenic | 40.0% | |
| ! | AAGCATCTAAAGTTGCTGGT+TGG | - | chr7_4:58051377-58051396 | Msa1166030:intron | 40.0% |
| AGCAACATTGTGACTGTCAT+TGG | + | chr7_4:58051430-58051449 | None:intergenic | 40.0% | |
| TCTTAGCAGAAACTGAACTG+AGG | + | chr7_4:58051559-58051578 | None:intergenic | 40.0% | |
| AAAAAGATCAAGAGCAGGGA+AGG | + | chr7_4:58051646-58051665 | None:intergenic | 40.0% | |
| AGCACATACAGAGAACAAGA+GGG | + | chr7_4:58051670-58051689 | None:intergenic | 40.0% | |
| TAGCACATACAGAGAACAAG+AGG | + | chr7_4:58051671-58051690 | None:intergenic | 40.0% | |
| TACAGAGGGGAAGAAGAAAT+AGG | + | chr7_4:58051790-58051809 | None:intergenic | 40.0% | |
| TACAGAGGGGAAGAAGAAAT+AGG | + | chr7_4:58051790-58051809 | None:intergenic | 40.0% | |
| TACAGAGGGGAAGAAGAAAT+AGG | + | chr7_4:58051790-58051809 | None:intergenic | 40.0% | |
| ! | AACTAGCGCATGGACATTTT+GGG | + | chr7_4:58052315-58052334 | None:intergenic | 40.0% |
| ! | TAACTAGCGCATGGACATTT+TGG | + | chr7_4:58052316-58052335 | None:intergenic | 40.0% |
| AATGCGCAATTTAAGTCACG+TGG | - | chr7_4:58052355-58052374 | Msa1166030:five_prime_UTR | 40.0% | |
| CAAATGGCCACCGTAATTGA+CGG | - | chr7_4:58047646-58047665 | Msa1166030:intron | 45.0% | |
| AGATCGGATTGTTTGTGCCA+CGG | + | chr7_4:58047677-58047696 | None:intergenic | 45.0% | |
| ATCGCGAGAGAAGATGATGA+AGG | + | chr7_4:58047763-58047782 | None:intergenic | 45.0% | |
| ATCTCGCGAGAAATTGGAAG+GGG | + | chr7_4:58047793-58047812 | None:intergenic | 45.0% | |
| GAATCTCGCGAGAAATTGGA+AGG | + | chr7_4:58047795-58047814 | None:intergenic | 45.0% | |
| !! | CATCATCATCTTCAGGTTGC+TGG | - | chr7_4:58047822-58047841 | Msa1166030:intron | 45.0% |
| GACTTGCAGTGGTGATAGTA+GGG | - | chr7_4:58047844-58047863 | Msa1166030:intron | 45.0% | |
| !! | GAGAAAAGCTTGCGCTGATT+TGG | - | chr7_4:58047902-58047921 | Msa1166030:intron | 45.0% |
| AACGCTGATCCCAATGTACA+TGG | - | chr7_4:58047999-58048018 | Msa1166030:intron | 45.0% | |
| GACTGAAATCAGCCTTGAGA+AGG | - | chr7_4:58048162-58048181 | Msa1166030:three_prime_UTR | 45.0% | |
| AGCCTTGAGAAGGATGTTGA+TGG | - | chr7_4:58048172-58048191 | Msa1166030:three_prime_UTR | 45.0% | |
| AGCCATCAACATCCTTCTCA+AGG | + | chr7_4:58048177-58048196 | None:intergenic | 45.0% | |
| ! | GCATTTACTTTGGGAGTGCA+GGG | + | chr7_4:58048256-58048275 | None:intergenic | 45.0% |
| ! | AGCATTTACTTTGGGAGTGC+AGG | + | chr7_4:58048257-58048276 | None:intergenic | 45.0% |
| TGGTTGAGATCGAACCTGTT+TGG | + | chr7_4:58048666-58048685 | None:intergenic | 45.0% | |
| GAATTCATCGAGGGTCTGTT+TGG | + | chr7_4:58048738-58048757 | None:intergenic | 45.0% | |
| CATGTGAGTGGAATTCATCG+AGG | + | chr7_4:58048748-58048767 | None:intergenic | 45.0% | |
| !! | AACCTTCCCACAGGTTTTAG+GGG | + | chr7_4:58049139-58049158 | None:intergenic | 45.0% |
| ! | CAACCTTCCCACAGGTTTTA+GGG | + | chr7_4:58049140-58049159 | None:intergenic | 45.0% |
| ! | ACAACCTTCCCACAGGTTTT+AGG | + | chr7_4:58049141-58049160 | None:intergenic | 45.0% |
| TTAAGCGACCCCTATTTGCA+GGG | + | chr7_4:58049277-58049296 | None:intergenic | 45.0% | |
| TTTAAGCGACCCCTATTTGC+AGG | + | chr7_4:58049278-58049297 | None:intergenic | 45.0% | |
| !! | GGCATTGATTAACTGGGTCA+AGG | + | chr7_4:58050363-58050382 | None:intergenic | 45.0% |
| ! | GAAGAAGAAGGTAATGGTGG+AGG | + | chr7_4:58049512-58049531 | None:intergenic | 45.0% |
| ! | TGTTGCTATTGCTGTTGGTG+GGG | + | chr7_4:58049561-58049580 | None:intergenic | 45.0% |
| ! | CTGTTGCTATTGCTGTTGGT+GGG | + | chr7_4:58049562-58049581 | None:intergenic | 45.0% |
| ! | TGTGACTGTGTTGACATTGC+CGG | + | chr7_4:58049966-58049985 | None:intergenic | 45.0% |
| TTAGTGTTGTGACTGTGTCG+TGG | + | chr7_4:58049999-58050018 | None:intergenic | 45.0% | |
| !!! | GAAGCTGCTTTTTCCGTCAT+CGG | + | chr7_4:58050114-58050133 | None:intergenic | 45.0% |
| CATGGAACACGAGAAAGAAG+AGG | - | chr7_4:58050264-58050283 | Msa1166030:intron | 45.0% | |
| !! | GGCATTGATTAACTGGGTCA+AGG | - | chr7_4:58050363-58050382 | Msa1166030:intron | 45.0% |
| ACTTTGCGGGGGCAAAAAAA+AGG | - | chr7_4:58050407-58050426 | Msa1166030:intron | 45.0% | |
| GCTTCACGTATGATGTCTTC+TGG | + | chr7_4:58050698-58050717 | None:intergenic | 45.0% | |
| ACATCTATTACTGCAGCTCC+AGG | + | chr7_4:58051286-58051305 | None:intergenic | 45.0% | |
| GGAGCTGCAGTAATAGATGT+CGG | - | chr7_4:58051286-58051305 | Msa1166030:intron | 45.0% | |
| !! | TGTTGATGACCCAACTAGGA+AGG | - | chr7_4:58051318-58051337 | Msa1166030:intron | 45.0% |
| CTATAACCTGCCTTCCTAGT+TGG | + | chr7_4:58051331-58051350 | None:intergenic | 45.0% | |
| CAACTAGGAAGGCAGGTTAT+AGG | - | chr7_4:58051329-58051348 | Msa1166030:intron | 45.0% | |
| AAGGCAGGTTATAGGCTTGT+TGG | - | chr7_4:58051337-58051356 | Msa1166030:intron | 45.0% | |
| !! | GAGGAAGCATCTAAAGTTGC+TGG | - | chr7_4:58051373-58051392 | Msa1166030:intron | 45.0% |
| GGGGAAAAAGATCAAGAGCA+GGG | + | chr7_4:58051650-58051669 | None:intergenic | 45.0% | |
| AGGGGAAAAAGATCAAGAGC+AGG | + | chr7_4:58051651-58051670 | None:intergenic | 45.0% | |
| GCACATACAGAGAACAAGAG+GGG | + | chr7_4:58051669-58051688 | None:intergenic | 45.0% | |
| GTATAGCACATACTTGGGCA+TGG | + | chr7_4:58051886-58051905 | None:intergenic | 45.0% | |
| GTATAGCACATACTTGGGCA+TGG | + | chr7_4:58051886-58051905 | None:intergenic | 45.0% | |
| !!! | TGTTTATTTTTTTATAATAT+AGG | - | chr7_4:58048766-58048785 | Msa1166030:intron | 5.0% |
| !!! | GTTTATTTTTTTATAATATA+GGG | - | chr7_4:58048767-58048786 | Msa1166030:intron | 5.0% |
| CGCAACCTTCTCCGATCAAA+TGG | - | chr7_4:58047630-58047649 | Msa1166030:intron | 50.0% | |
| CACGGCTTTGCCGTCAATTA+CGG | + | chr7_4:58047659-58047678 | None:intergenic | 50.0% | |
| CCTTGCCGTATTTCTCAGAG+AGG | + | chr7_4:58047723-58047742 | None:intergenic | 50.0% | |
| ! | CCTCTCTGAGAAATACGGCA+AGG | - | chr7_4:58047720-58047739 | Msa1166030:intron | 50.0% |
| TCTCGCGAGAAATTGGAAGG+GGG | + | chr7_4:58047792-58047811 | None:intergenic | 50.0% | |
| GGACTTGCAGTGGTGATAGT+AGG | - | chr7_4:58047843-58047862 | Msa1166030:intron | 50.0% | |
| GCAAGCTTGCCGATGTTCAA+AGG | + | chr7_4:58048205-58048224 | None:intergenic | 50.0% | |
| ATCGGCAAGCTTGCCATGAA+AGG | - | chr7_4:58048211-58048230 | Msa1166030:three_prime_UTR | 50.0% | |
| GAGTGCAGGGAACAAAGAGA+GGG | + | chr7_4:58048243-58048262 | None:intergenic | 50.0% | |
| CATCGAGGGTCTGTTTGGTA+AGG | + | chr7_4:58048733-58048752 | None:intergenic | 50.0% | |
| TGTGATCCCCCTAAAACCTG+TGG | - | chr7_4:58049129-58049148 | Msa1166030:CDS | 50.0% | |
| GTGATCCCCCTAAAACCTGT+GGG | - | chr7_4:58049130-58049149 | Msa1166030:CDS | 50.0% | |
| !!! | ACCTTCCCACAGGTTTTAGG+GGG | + | chr7_4:58049138-58049157 | None:intergenic | 50.0% |
| TGTGCGTTCTTGATCGGCAT+GGG | + | chr7_4:58049201-58049220 | None:intergenic | 50.0% | |
| TTGTGCGTTCTTGATCGGCA+TGG | + | chr7_4:58049202-58049221 | None:intergenic | 50.0% | |
| ! | GTGGTGGGAGAGAAGAAAGA+AGG | + | chr7_4:58049534-58049553 | None:intergenic | 50.0% |
| ! | TTGCTATTGCTGTTGGTGGG+GGG | + | chr7_4:58049559-58049578 | None:intergenic | 50.0% |
| ! | GTTGCTATTGCTGTTGGTGG+GGG | + | chr7_4:58049560-58049579 | None:intergenic | 50.0% |
| ! | GCTGTTGCTATTGCTGTTGG+TGG | + | chr7_4:58049563-58049582 | None:intergenic | 50.0% |
| CGGTTGCAGAAGAAGAGAAG+AGG | - | chr7_4:58049734-58049753 | Msa1166030:intron | 50.0% | |
| TGCCTGTCCTGAACAATCTG+AGG | - | chr7_4:58049897-58049916 | Msa1166030:intron | 50.0% | |
| CTGTCCTGAACAATCTGAGG+CGG | - | chr7_4:58049900-58049919 | Msa1166030:intron | 50.0% | |
| ACATTGCCGGCGTTTAAGAG+CGG | + | chr7_4:58049953-58049972 | None:intergenic | 50.0% | |
| AAAGGGGAAAAGGGCAGTTG+TGG | - | chr7_4:58050580-58050599 | Msa1166030:intron | 50.0% | |
| TGTTATTGCAGCAGCAGGAC+AGG | - | chr7_4:58050724-58050743 | Msa1166030:intron | 50.0% | |
| GGAACTGGCCACAAACACTT+AGG | + | chr7_4:58050949-58050968 | None:intergenic | 50.0% | |
| GGTTGGATTACTCCTGTTCC+TGG | - | chr7_4:58051394-58051413 | Msa1166030:intron | 50.0% | |
| TGGATTACTCCTGTTCCTGG+AGG | - | chr7_4:58051397-58051416 | Msa1166030:intron | 50.0% | |
| AGGTTGCAGGCATTACAGAG+GGG | + | chr7_4:58051803-58051822 | None:intergenic | 50.0% | |
| GAGGTTGCAGGCATTACAGA+GGG | + | chr7_4:58051804-58051823 | None:intergenic | 50.0% | |
| AGAGGTTGCAGGCATTACAG+AGG | + | chr7_4:58051805-58051824 | None:intergenic | 50.0% | |
| AGGTTGCAGGCATTACAGAG+GGG | + | chr7_4:58051803-58051822 | None:intergenic | 50.0% | |
| GAGGTTGCAGGCATTACAGA+GGG | + | chr7_4:58051804-58051823 | None:intergenic | 50.0% | |
| AGAGGTTGCAGGCATTACAG+AGG | + | chr7_4:58051805-58051824 | None:intergenic | 50.0% | |
| AGGTTGCAGGCATTACAGAG+GGG | + | chr7_4:58051803-58051822 | None:intergenic | 50.0% | |
| GAGGTTGCAGGCATTACAGA+GGG | + | chr7_4:58051804-58051823 | None:intergenic | 50.0% | |
| AGAGGTTGCAGGCATTACAG+AGG | + | chr7_4:58051805-58051824 | None:intergenic | 50.0% | |
| ! | ACATTTTGGGCATGGCTGCA+GGG | + | chr7_4:58052302-58052321 | None:intergenic | 50.0% |
| TGCGCTAGTTAACTAGCGCA+TGG | + | chr7_4:58052325-58052344 | None:intergenic | 50.0% | |
| GTCACGTGGCGCAAATTAAG+TGG | - | chr7_4:58052369-58052388 | Msa1166030:five_prime_UTR | 50.0% | |
| GCAAATTAAGTGGCGCAAGG+TGG | - | chr7_4:58052379-58052398 | Msa1166030:five_prime_UTR | 50.0% | |
| GGTGGCCATTTGATCGGAGA+AGG | + | chr7_4:58047638-58047657 | None:intergenic | 55.0% | |
| GGCTTTGCCGTCAATTACGG+TGG | + | chr7_4:58047656-58047675 | None:intergenic | 55.0% | |
| CGTAATTGACGGCAAAGCCG+TGG | - | chr7_4:58047657-58047676 | Msa1166030:intron | 55.0% | |
| CCTCGTCGGCGATTTCAGAT+CGG | + | chr7_4:58047693-58047712 | None:intergenic | 55.0% | |
| AGAGAGGATACGGACCTCGT+CGG | + | chr7_4:58047707-58047726 | None:intergenic | 55.0% | |
| CTCGCGAGAAATTGGAAGGG+GGG | + | chr7_4:58047791-58047810 | None:intergenic | 55.0% | |
| ! | TCAGGTTGCTGGACTTGCAG+TGG | - | chr7_4:58047833-58047852 | Msa1166030:intron | 55.0% |
| GAGAGGGTCTCTGCCTTTCA+TGG | + | chr7_4:58048227-58048246 | None:intergenic | 55.0% | |
| GGAGTGCAGGGAACAAAGAG+AGG | + | chr7_4:58048244-58048263 | None:intergenic | 55.0% | |
| TCCCCCTAAAACCTGTGGGA+AGG | - | chr7_4:58049134-58049153 | Msa1166030:CDS | 55.0% | |
| ! | CGAAGGCATGGTTGAGGTGA+CGG | + | chr7_4:58049858-58049877 | None:intergenic | 55.0% |
| GGCAAGTGAGACAAGGCACA+CGG | + | chr7_4:58049881-58049900 | None:intergenic | 55.0% | |
| CAGGACAGGCAAGTGAGACA+AGG | + | chr7_4:58049888-58049907 | None:intergenic | 55.0% | |
| CGCCTCAGATTGTTCAGGAC+AGG | + | chr7_4:58049902-58049921 | None:intergenic | 55.0% | |
| CGTACCGCCTCAGATTGTTC+AGG | + | chr7_4:58049907-58049926 | None:intergenic | 55.0% | |
| ! | CAGTTTTCGGCGACCGATGA+CGG | - | chr7_4:58050098-58050117 | Msa1166030:intron | 55.0% |
| GGGAAAAGGGCAGTTGTGGT+TGG | - | chr7_4:58050584-58050603 | Msa1166030:intron | 55.0% | |
| AGCAGCAGGACAGGCAAAGA+TGG | - | chr7_4:58050733-58050752 | Msa1166030:intron | 55.0% | |
| GATGACCCAACTAGGAAGGC+AGG | - | chr7_4:58051322-58051341 | Msa1166030:intron | 55.0% | |
| ! | ACTCCTGTTCCTGGAGGTGT+AGG | - | chr7_4:58051403-58051422 | Msa1166030:intron | 55.0% |
| GTCATTGGACCTACACCTCC+AGG | + | chr7_4:58051415-58051434 | None:intergenic | 55.0% | |
| ! | GTGCGAGTGTTTTGTGCTGC+GGG | + | chr7_4:58051856-58051875 | None:intergenic | 55.0% |
| ! | GGTGCGAGTGTTTTGTGCTG+CGG | + | chr7_4:58051857-58051876 | None:intergenic | 55.0% |
| CATACTTGGGCATGGCTGCA+GGG | + | chr7_4:58051878-58051897 | None:intergenic | 55.0% | |
| ACATACTTGGGCATGGCTGC+AGG | + | chr7_4:58051879-58051898 | None:intergenic | 55.0% | |
| ! | GTGCGAGTGTTTTGTGCTGC+GGG | + | chr7_4:58051856-58051875 | None:intergenic | 55.0% |
| ! | GGTGCGAGTGTTTTGTGCTG+CGG | + | chr7_4:58051857-58051876 | None:intergenic | 55.0% |
| CATACTTGGGCATGGCTGCA+GGG | + | chr7_4:58051878-58051897 | None:intergenic | 55.0% | |
| ACATACTTGGGCATGGCTGC+AGG | + | chr7_4:58051879-58051898 | None:intergenic | 55.0% | |
| ! | GTGCGAGTGTTTTGTGCTGC+GGG | + | chr7_4:58051856-58051875 | None:intergenic | 55.0% |
| ! | GGTGCGAGTGTTTTGTGCTG+CGG | + | chr7_4:58051857-58051876 | None:intergenic | 55.0% |
| ! | GACATTTTGGGCATGGCTGC+AGG | + | chr7_4:58052303-58052322 | None:intergenic | 55.0% |
| ! | GCGCATGGACATTTTGGGCA+TGG | + | chr7_4:58052310-58052329 | None:intergenic | 55.0% |
| GGCGCAAATTAAGTGGCGCA+AGG | - | chr7_4:58052376-58052395 | Msa1166030:five_prime_UTR | 55.0% | |
| ! | CCGATCTGAAATCGCCGACG+AGG | - | chr7_4:58047690-58047709 | Msa1166030:intron | 60.0% |
| ! | CTATTGCTGTTGGTGGGGGG+CGG | + | chr7_4:58049556-58049575 | None:intergenic | 60.0% |
| TTACGACCGAGACCTGGCGA+CGG | + | chr7_4:58049826-58049845 | None:intergenic | 60.0% | |
| ! | ATGGTTGAGGTGACGGCAGG+CGG | + | chr7_4:58049851-58049870 | None:intergenic | 60.0% |
| ! | ACACGGCGAAGGCATGGTTG+AGG | + | chr7_4:58049864-58049883 | None:intergenic | 60.0% |
| TGAGACAAGGCACACGGCGA+AGG | + | chr7_4:58049875-58049894 | None:intergenic | 60.0% | |
| !! | TTTAAGAGCGGTACCGGCGC+TGG | + | chr7_4:58049941-58049960 | None:intergenic | 60.0% |
| CCGGCGTTTAAGAGCGGTAC+CGG | + | chr7_4:58049947-58049966 | None:intergenic | 60.0% | |
| CCGGTACCGCTCTTAAACGC+CGG | - | chr7_4:58049944-58049963 | Msa1166030:intron | 60.0% | |
| GGACCTACACCTCCAGGAAC+AGG | + | chr7_4:58051409-58051428 | None:intergenic | 60.0% | |
| ! | GATAGAGTGCCACCGTCGCC+AGG | - | chr7_4:58049811-58049830 | Msa1166030:intron | 65.0% |
| GCGGAGTTACGACCGAGACC+TGG | + | chr7_4:58049832-58049851 | None:intergenic | 65.0% | |
| ! | GGCATGGTTGAGGTGACGGC+AGG | + | chr7_4:58049854-58049873 | None:intergenic | 65.0% |
| CAAGGCACACGGCGAAGGCA+TGG | + | chr7_4:58049870-58049889 | None:intergenic | 65.0% | |
| ! | TGTTGGTGGGGGGCGGTGGT+GGG | + | chr7_4:58049549-58049568 | None:intergenic | 70.0% |
| ! | TTGCTGTTGGTGGGGGGCGG+TGG | + | chr7_4:58049553-58049572 | None:intergenic | 70.0% |
| GTGCCACCGTCGCCAGGTCT+CGG | - | chr7_4:58049817-58049836 | Msa1166030:intron | 70.0% | |
| CGCAACCTCTGCTCCAGCGC+CGG | - | chr7_4:58049925-58049944 | Msa1166030:intron | 70.0% | |
| ! | CTGTTGGTGGGGGGCGGTGG+TGG | + | chr7_4:58049550-58049569 | None:intergenic | 75.0% |
| CGACCGAGACCTGGCGACGG+TGG | + | chr7_4:58049823-58049842 | None:intergenic | 75.0% | |
| !! | CGGTACCGGCGCTGGAGCAG+AGG | + | chr7_4:58049933-58049952 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 58047471 | 58052402 | 58047471 | ID=Msa1166030;Name=Msa1166030 |
| chr7_4 | mRNA | 58047471 | 58052402 | 58047471 | ID=Msa1166030-mRNA-1;Parent=Msa1166030;Name=Msa1166030-mRNA-1;_AED=0.13;_eAED=0.13;_QI=178|0.8|0.83|1|0.6|0.5|6|480|280 |
| chr7_4 | exon | 58047471 | 58047642 | 58047471 | ID=Msa1166030-mRNA-1:exon:17721;Parent=Msa1166030-mRNA-1 |
| chr7_4 | exon | 58048067 | 58048611 | 58048067 | ID=Msa1166030-mRNA-1:exon:17720;Parent=Msa1166030-mRNA-1 |
| chr7_4 | exon | 58049119 | 58049289 | 58049119 | ID=Msa1166030-mRNA-1:exon:17719;Parent=Msa1166030-mRNA-1 |
| chr7_4 | exon | 58051606 | 58051763 | 58051606 | ID=Msa1166030-mRNA-1:exon:17718;Parent=Msa1166030-mRNA-1 |
| chr7_4 | exon | 58051853 | 58052036 | 58051853 | ID=Msa1166030-mRNA-1:exon:17717;Parent=Msa1166030-mRNA-1 |
| chr7_4 | exon | 58052132 | 58052402 | 58052132 | ID=Msa1166030-mRNA-1:exon:17716;Parent=Msa1166030-mRNA-1 |
| chr7_4 | five_prime_UTR | 58052225 | 58052402 | 58052225 | ID=Msa1166030-mRNA-1:five_prime_utr;Parent=Msa1166030-mRNA-1 |
| chr7_4 | CDS | 58052132 | 58052224 | 58052132 | ID=Msa1166030-mRNA-1:cds;Parent=Msa1166030-mRNA-1 |
| chr7_4 | CDS | 58051853 | 58052036 | 58051853 | ID=Msa1166030-mRNA-1:cds;Parent=Msa1166030-mRNA-1 |
| chr7_4 | CDS | 58051606 | 58051763 | 58051606 | ID=Msa1166030-mRNA-1:cds;Parent=Msa1166030-mRNA-1 |
| chr7_4 | CDS | 58049119 | 58049289 | 58049119 | ID=Msa1166030-mRNA-1:cds;Parent=Msa1166030-mRNA-1 |
| chr7_4 | CDS | 58048375 | 58048611 | 58048375 | ID=Msa1166030-mRNA-1:cds;Parent=Msa1166030-mRNA-1 |
| chr7_4 | three_prime_UTR | 58048067 | 58048374 | 58048067 | ID=Msa1166030-mRNA-1:three_prime_utr;Parent=Msa1166030-mRNA-1 |
| chr7_4 | three_prime_UTR | 58047471 | 58047642 | 58047471 | ID=Msa1166030-mRNA-1:three_prime_utr;Parent=Msa1166030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
