Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0933380 | OMO59171.1 | 100.000 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 1.07e-131 | 376 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0933380 | sp|Q06396|ARF1_ORYSJ | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 9.00e-134 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0933380 | A0A1R3GM71 | 100.000 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 5.13e-132 | 376 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010490 | Msa0933380 | 0.835971 | 1.229496e-56 | -8.615850e-47 |
| Msa0010500 | Msa0933380 | 0.821175 | 4.642203e-53 | -8.615850e-47 |
| Msa0020390 | Msa0933380 | 0.894531 | 2.259156e-75 | -8.615850e-47 |
| Msa0024930 | Msa0933380 | 0.804599 | 1.999787e-49 | -8.615850e-47 |
| Msa0027260 | Msa0933380 | 0.830431 | 2.947674e-55 | -8.615850e-47 |
| Msa0029260 | Msa0933380 | 0.838277 | 3.164961e-57 | -8.615850e-47 |
| Msa0029630 | Msa0933380 | 0.801621 | 8.260167e-49 | -8.615850e-47 |
| Msa0038870 | Msa0933380 | 0.820489 | 6.678081e-53 | -8.615850e-47 |
| Msa0068020 | Msa0933380 | 0.802430 | 5.631769e-49 | -8.615850e-47 |
| Msa0071250 | Msa0933380 | 0.830520 | 2.803891e-55 | -8.615850e-47 |
| Msa0072420 | Msa0933380 | 0.845044 | 5.191717e-59 | -8.615850e-47 |
| Msa0075170 | Msa0933380 | 0.807223 | 5.613035e-50 | -8.615850e-47 |
| Msa0086420 | Msa0933380 | 0.807176 | 5.743663e-50 | -8.615850e-47 |
| Msa0090520 | Msa0933380 | 0.842746 | 2.142707e-58 | -8.615850e-47 |
| Msa0090550 | Msa0933380 | 0.847404 | 1.181199e-59 | -8.615850e-47 |
| Msa0090570 | Msa0933380 | 0.818116 | 2.317864e-52 | -8.615850e-47 |
| Msa0091610 | Msa0933380 | 0.833649 | 4.723142e-56 | -8.615850e-47 |
| Msa0093010 | Msa0933380 | 0.835261 | 1.860210e-56 | -8.615850e-47 |
| Msa0095360 | Msa0933380 | 0.803832 | 2.888371e-49 | -8.615850e-47 |
| Msa0095770 | Msa0933380 | 0.801612 | 8.292162e-49 | -8.615850e-47 |
| Msa0096980 | Msa0933380 | 0.810457 | 1.141720e-50 | -8.615850e-47 |
| Msa0115190 | Msa0933380 | 0.811926 | 5.482430e-51 | -8.615850e-47 |
| Msa0115370 | Msa0933380 | 0.802570 | 5.268642e-49 | -8.615850e-47 |
| Msa0118540 | Msa0933380 | 0.827292 | 1.696147e-54 | -8.615850e-47 |
| Msa0604290 | Msa0933380 | 0.866500 | 2.724125e-65 | -8.615850e-47 |
| Msa0609220 | Msa0933380 | 0.803961 | 2.715368e-49 | -8.615850e-47 |
| Msa0610840 | Msa0933380 | -0.849236 | 3.681504e-60 | -8.615850e-47 |
| Msa0612720 | Msa0933380 | 0.835032 | 2.124374e-56 | -8.615850e-47 |
| Msa0613970 | Msa0933380 | 0.804232 | 2.383961e-49 | -8.615850e-47 |
| Msa0614510 | Msa0933380 | 0.825283 | 5.099609e-54 | -8.615850e-47 |
| Msa0615580 | Msa0933380 | 0.828902 | 6.944647e-55 | -8.615850e-47 |
| Msa0628420 | Msa0933380 | 0.804470 | 2.127683e-49 | -8.615850e-47 |
| Msa0629240 | Msa0933380 | 0.815856 | 7.460172e-52 | -8.615850e-47 |
| Msa0631350 | Msa0933380 | 0.806399 | 8.381290e-50 | -8.615850e-47 |
| Msa0640940 | Msa0933380 | 0.815451 | 9.184262e-52 | -8.615850e-47 |
| Msa0642970 | Msa0933380 | 0.850336 | 1.813183e-60 | -8.615850e-47 |
| Msa0645530 | Msa0933380 | 0.826230 | 3.040765e-54 | -8.615850e-47 |
| Msa0649220 | Msa0933380 | 0.818909 | 1.532102e-52 | -8.615850e-47 |
| Msa0661710 | Msa0933380 | 0.807580 | 4.714818e-50 | -8.615850e-47 |
| Msa0662630 | Msa0933380 | 0.836514 | 8.947528e-57 | -8.615850e-47 |
| Msa0665280 | Msa0933380 | 0.827955 | 1.175564e-54 | -8.615850e-47 |
| Msa0672550 | Msa0933380 | 0.821500 | 3.906733e-53 | -8.615850e-47 |
| Msa0679030 | Msa0933380 | 0.818775 | 1.643456e-52 | -8.615850e-47 |
| Msa0679360 | Msa0933380 | 0.820405 | 6.977886e-53 | -8.615850e-47 |
| Msa0682680 | Msa0933380 | 0.843675 | 1.211349e-58 | -8.615850e-47 |
| Msa0683600 | Msa0933380 | 0.807388 | 5.178641e-50 | -8.615850e-47 |
| Msa0685090 | Msa0933380 | 0.832299 | 1.023174e-55 | -8.615850e-47 |
| Msa0689320 | Msa0933380 | 0.811788 | 5.874905e-51 | -8.615850e-47 |
| Msa0689440 | Msa0933380 | 0.833896 | 4.099031e-56 | -8.615850e-47 |
| Msa0693210 | Msa0933380 | 0.807364 | 5.241110e-50 | -8.615850e-47 |
| Msa0694990 | Msa0933380 | 0.802252 | 6.126549e-49 | -8.615850e-47 |
| Msa0698540 | Msa0933380 | 0.816737 | 4.740309e-52 | -8.615850e-47 |
| Msa0705990 | Msa0933380 | 0.814365 | 1.598924e-51 | -8.615850e-47 |
| Msa0709120 | Msa0933380 | 0.828940 | 6.797497e-55 | -8.615850e-47 |
| Msa0721280 | Msa0933380 | 0.810025 | 1.415049e-50 | -8.615850e-47 |
| Msa0738440 | Msa0933380 | 0.802643 | 5.090521e-49 | -8.615850e-47 |
| Msa0746170 | Msa0933380 | 0.817669 | 2.925550e-52 | -8.615850e-47 |
| Msa0746210 | Msa0933380 | 0.821493 | 3.921151e-53 | -8.615850e-47 |
| Msa0748920 | Msa0933380 | 0.812303 | 4.537326e-51 | -8.615850e-47 |
| Msa0750850 | Msa0933380 | 0.800662 | 1.297240e-48 | -8.615850e-47 |
| Msa0751010 | Msa0933380 | 0.839372 | 1.648046e-57 | -8.615850e-47 |
| Msa0756380 | Msa0933380 | 0.831299 | 1.805858e-55 | -8.615850e-47 |
| Msa0793380 | Msa0933380 | 0.801406 | 9.139732e-49 | -8.615850e-47 |
| Msa0794050 | Msa0933380 | 0.851068 | 1.128758e-60 | -8.615850e-47 |
| Msa0800370 | Msa0933380 | 0.855446 | 6.274513e-62 | -8.615850e-47 |
| Msa0822500 | Msa0933380 | 0.808417 | 3.128677e-50 | -8.615850e-47 |
| Msa0826150 | Msa0933380 | 0.863631 | 2.168350e-64 | -8.615850e-47 |
| Msa0828590 | Msa0933380 | 0.801123 | 1.044726e-48 | -8.615850e-47 |
| Msa0831100 | Msa0933380 | 0.805596 | 1.236719e-49 | -8.615850e-47 |
| Msa0833190 | Msa0933380 | -0.809439 | 1.890875e-50 | -8.615850e-47 |
| Msa0120880 | Msa0933380 | 0.856426 | 3.244235e-62 | -8.615850e-47 |
| Msa0121870 | Msa0933380 | 0.842260 | 2.882148e-58 | -8.615850e-47 |
| Msa0127850 | Msa0933380 | 0.801621 | 8.257711e-49 | -8.615850e-47 |
| Msa0130720 | Msa0933380 | 0.801672 | 8.063098e-49 | -8.615850e-47 |
| Msa0137990 | Msa0933380 | 0.844278 | 8.345361e-59 | -8.615850e-47 |
| Msa0139670 | Msa0933380 | 0.830190 | 3.377249e-55 | -8.615850e-47 |
| Msa0145010 | Msa0933380 | 0.811682 | 6.197608e-51 | -8.615850e-47 |
| Msa0149440 | Msa0933380 | 0.835155 | 1.978166e-56 | -8.615850e-47 |
| Msa0162130 | Msa0933380 | 0.823222 | 1.556114e-53 | -8.615850e-47 |
| Msa0167980 | Msa0933380 | 0.844944 | 5.522976e-59 | -8.615850e-47 |
| Msa0169300 | Msa0933380 | 0.835973 | 1.228328e-56 | -8.615850e-47 |
| Msa0183850 | Msa0933380 | 0.841841 | 3.719324e-58 | -8.615850e-47 |
| Msa0183870 | Msa0933380 | 0.870262 | 1.666912e-66 | -8.615850e-47 |
| Msa0183900 | Msa0933380 | 0.834536 | 2.831452e-56 | -8.615850e-47 |
| Msa0188350 | Msa0933380 | 0.842713 | 2.185449e-58 | -8.615850e-47 |
| Msa0189300 | Msa0933380 | 0.801369 | 9.300398e-49 | -8.615850e-47 |
| Msa0189520 | Msa0933380 | 0.844893 | 5.702540e-59 | -8.615850e-47 |
| Msa0190120 | Msa0933380 | 0.846826 | 1.701263e-59 | -8.615850e-47 |
| Msa0204960 | Msa0933380 | 0.900313 | 8.300886e-78 | -8.615850e-47 |
| Msa0206690 | Msa0933380 | 0.840039 | 1.105454e-57 | -8.615850e-47 |
| Msa0207040 | Msa0933380 | -0.831776 | 1.377650e-55 | -8.615850e-47 |
| Msa0207670 | Msa0933380 | 0.849018 | 4.230994e-60 | -8.615850e-47 |
| Msa0207700 | Msa0933380 | 0.807798 | 4.239497e-50 | -8.615850e-47 |
| Msa0209350 | Msa0933380 | 0.829157 | 6.023560e-55 | -8.615850e-47 |
| Msa0209500 | Msa0933380 | 0.806611 | 7.561762e-50 | -8.615850e-47 |
| Msa0214550 | Msa0933380 | 0.837544 | 4.881401e-57 | -8.615850e-47 |
| Msa0217670 | Msa0933380 | 0.824625 | 7.292348e-54 | -8.615850e-47 |
| Msa0220240 | Msa0933380 | 0.807509 | 4.882238e-50 | -8.615850e-47 |
| Msa0220250 | Msa0933380 | 0.808201 | 3.479121e-50 | -8.615850e-47 |
| Msa0223330 | Msa0933380 | 0.836633 | 8.346831e-57 | -8.615850e-47 |
| Msa0231100 | Msa0933380 | 0.829734 | 4.362214e-55 | -8.615850e-47 |
| Msa0231790 | Msa0933380 | 0.834090 | 3.664436e-56 | -8.615850e-47 |
| Msa0233370 | Msa0933380 | 0.847785 | 9.279816e-60 | -8.615850e-47 |
| Msa0365860 | Msa0933380 | 0.814182 | 1.755094e-51 | -8.615850e-47 |
| Msa0379570 | Msa0933380 | 0.812874 | 3.403660e-51 | -8.615850e-47 |
| Msa0380100 | Msa0933380 | 0.811438 | 7.000428e-51 | -8.615850e-47 |
| Msa0382370 | Msa0933380 | 0.830987 | 2.154084e-55 | -8.615850e-47 |
| Msa0385500 | Msa0933380 | 0.878227 | 3.330030e-69 | -8.615850e-47 |
| Msa0386770 | Msa0933380 | 0.805199 | 1.497694e-49 | -8.615850e-47 |
| Msa0387820 | Msa0933380 | 0.805238 | 1.470223e-49 | -8.615850e-47 |
| Msa0395980 | Msa0933380 | 0.801281 | 9.694689e-49 | -8.615850e-47 |
| Msa0401560 | Msa0933380 | 0.828925 | 6.856494e-55 | -8.615850e-47 |
| Msa0403770 | Msa0933380 | 0.838621 | 2.579321e-57 | -8.615850e-47 |
| Msa0408390 | Msa0933380 | 0.813404 | 2.603793e-51 | -8.615850e-47 |
| Msa0432160 | Msa0933380 | 0.805316 | 1.415884e-49 | -8.615850e-47 |
| Msa0443390 | Msa0933380 | 0.803907 | 2.786662e-49 | -8.615850e-47 |
| Msa0450400 | Msa0933380 | -0.863599 | 2.219694e-64 | -8.615850e-47 |
| Msa0450930 | Msa0933380 | 0.800680 | 1.286541e-48 | -8.615850e-47 |
| Msa0463340 | Msa0933380 | 0.809898 | 1.506683e-50 | -8.615850e-47 |
| Msa0463850 | Msa0933380 | 0.835523 | 1.596907e-56 | -8.615850e-47 |
| Msa0466350 | Msa0933380 | 0.809861 | 1.535078e-50 | -8.615850e-47 |
| Msa0469620 | Msa0933380 | -0.841770 | 3.883745e-58 | -8.615850e-47 |
| Msa0476680 | Msa0933380 | 0.806230 | 9.098201e-50 | -8.615850e-47 |
| Msa0240900 | Msa0933380 | 0.803455 | 3.457700e-49 | -8.615850e-47 |
| Msa0244970 | Msa0933380 | 0.846853 | 1.673157e-59 | -8.615850e-47 |
| Msa0244980 | Msa0933380 | 0.871308 | 7.543112e-67 | -8.615850e-47 |
| Msa0245430 | Msa0933380 | 0.818083 | 2.358496e-52 | -8.615850e-47 |
| Msa0249580 | Msa0933380 | 0.849885 | 2.425664e-60 | -8.615850e-47 |
| Msa0256330 | Msa0933380 | 0.808877 | 2.495112e-50 | -8.615850e-47 |
| Msa0257490 | Msa0933380 | 0.875101 | 4.016493e-68 | -8.615850e-47 |
| Msa0261550 | Msa0933380 | 0.858142 | 1.009258e-62 | -8.615850e-47 |
| Msa0269470 | Msa0933380 | 0.841989 | 3.400407e-58 | -8.615850e-47 |
| Msa0271360 | Msa0933380 | 0.833526 | 5.069108e-56 | -8.615850e-47 |
| Msa0271890 | Msa0933380 | 0.842361 | 2.710328e-58 | -8.615850e-47 |
| Msa0272300 | Msa0933380 | 0.804228 | 2.389378e-49 | -8.615850e-47 |
| Msa0274040 | Msa0933380 | -0.816536 | 5.258082e-52 | -8.615850e-47 |
| Msa0275020 | Msa0933380 | 0.831721 | 1.422000e-55 | -8.615850e-47 |
| Msa0275360 | Msa0933380 | 0.853721 | 1.982072e-61 | -8.615850e-47 |
| Msa0281530 | Msa0933380 | 0.903757 | 2.493311e-79 | -8.615850e-47 |
| Msa0283420 | Msa0933380 | 0.849612 | 2.891188e-60 | -8.615850e-47 |
| Msa0284820 | Msa0933380 | 0.809204 | 2.124105e-50 | -8.615850e-47 |
| Msa0288080 | Msa0933380 | 0.800597 | 1.337754e-48 | -8.615850e-47 |
| Msa0295330 | Msa0933380 | 0.803668 | 3.123131e-49 | -8.615850e-47 |
| Msa0296790 | Msa0933380 | 0.874594 | 5.976865e-68 | -8.615850e-47 |
| Msa0296820 | Msa0933380 | 0.810732 | 9.956849e-51 | -8.615850e-47 |
| Msa0304510 | Msa0933380 | 0.830175 | 3.405881e-55 | -8.615850e-47 |
| Msa0304660 | Msa0933380 | 0.806548 | 7.799133e-50 | -8.615850e-47 |
| Msa0309880 | Msa0933380 | 0.823123 | 1.640431e-53 | -8.615850e-47 |
| Msa0310860 | Msa0933380 | 0.846335 | 2.316791e-59 | -8.615850e-47 |
| Msa0315940 | Msa0933380 | 0.827428 | 1.573491e-54 | -8.615850e-47 |
| Msa0317960 | Msa0933380 | 0.820293 | 7.403075e-53 | -8.615850e-47 |
| Msa0317970 | Msa0933380 | 0.824566 | 7.530223e-54 | -8.615850e-47 |
| Msa0320590 | Msa0933380 | 0.863883 | 1.811566e-64 | -8.615850e-47 |
| Msa0321690 | Msa0933380 | 0.857671 | 1.392551e-62 | -8.615850e-47 |
| Msa0322900 | Msa0933380 | 0.816537 | 5.254667e-52 | -8.615850e-47 |
| Msa0326480 | Msa0933380 | 0.840453 | 8.617592e-58 | -8.615850e-47 |
| Msa0331700 | Msa0933380 | 0.804196 | 2.425712e-49 | -8.615850e-47 |
| Msa0335060 | Msa0933380 | 0.824331 | 8.552111e-54 | -8.615850e-47 |
| Msa0339910 | Msa0933380 | 0.809757 | 1.616144e-50 | -8.615850e-47 |
| Msa0343850 | Msa0933380 | 0.831233 | 1.874867e-55 | -8.615850e-47 |
| Msa0357900 | Msa0933380 | 0.848599 | 5.531019e-60 | -8.615850e-47 |
| Msa0358860 | Msa0933380 | 0.839566 | 1.467515e-57 | -8.615850e-47 |
| Msa0361490 | Msa0933380 | 0.802016 | 6.853613e-49 | -8.615850e-47 |
| Msa0482940 | Msa0933380 | 0.845963 | 2.925449e-59 | -8.615850e-47 |
| Msa0484740 | Msa0933380 | 0.831214 | 1.894892e-55 | -8.615850e-47 |
| Msa0485710 | Msa0933380 | 0.809156 | 2.174864e-50 | -8.615850e-47 |
| Msa0491000 | Msa0933380 | 0.808143 | 3.580035e-50 | -8.615850e-47 |
| Msa0496450 | Msa0933380 | 0.898207 | 6.649380e-77 | -8.615850e-47 |
| Msa0497210 | Msa0933380 | 0.818190 | 2.230962e-52 | -8.615850e-47 |
| Msa0510840 | Msa0933380 | 0.814514 | 1.482326e-51 | -8.615850e-47 |
| Msa0511770 | Msa0933380 | 0.813451 | 2.542596e-51 | -8.615850e-47 |
| Msa0518170 | Msa0933380 | 0.800439 | 1.440754e-48 | -8.615850e-47 |
| Msa0521010 | Msa0933380 | 0.814157 | 1.777679e-51 | -8.615850e-47 |
| Msa0527020 | Msa0933380 | 0.820207 | 7.748135e-53 | -8.615850e-47 |
| Msa0527540 | Msa0933380 | 0.800009 | 1.761866e-48 | -8.615850e-47 |
| Msa0531250 | Msa0933380 | 0.805008 | 1.642418e-49 | -8.615850e-47 |
| Msa0531530 | Msa0933380 | 0.815363 | 9.608489e-52 | -8.615850e-47 |
| Msa0531650 | Msa0933380 | 0.809703 | 1.659542e-50 | -8.615850e-47 |
| Msa0534900 | Msa0933380 | 0.842061 | 3.253990e-58 | -8.615850e-47 |
| Msa0542290 | Msa0933380 | 0.852413 | 4.692253e-61 | -8.615850e-47 |
| Msa0542560 | Msa0933380 | 0.870388 | 1.515766e-66 | -8.615850e-47 |
| Msa0547160 | Msa0933380 | 0.818308 | 2.097816e-52 | -8.615850e-47 |
| Msa0556060 | Msa0933380 | 0.814260 | 1.686735e-51 | -8.615850e-47 |
| Msa0560500 | Msa0933380 | 0.806609 | 7.571026e-50 | -8.615850e-47 |
| Msa0581110 | Msa0933380 | 0.831775 | 1.379046e-55 | -8.615850e-47 |
| Msa0588260 | Msa0933380 | 0.875444 | 3.065829e-68 | -8.615850e-47 |
| Msa0600080 | Msa0933380 | 0.873248 | 1.702695e-67 | -8.615850e-47 |
| Msa0600450 | Msa0933380 | 0.812148 | 4.905208e-51 | -8.615850e-47 |
| Msa0844110 | Msa0933380 | 0.811385 | 7.190320e-51 | -8.615850e-47 |
| Msa0844280 | Msa0933380 | 0.820018 | 8.559591e-53 | -8.615850e-47 |
| Msa0847150 | Msa0933380 | 0.813905 | 2.020316e-51 | -8.615850e-47 |
| Msa0861470 | Msa0933380 | 0.807720 | 4.403265e-50 | -8.615850e-47 |
| Msa0861500 | Msa0933380 | 0.815521 | 8.858252e-52 | -8.615850e-47 |
| Msa0861570 | Msa0933380 | 0.811470 | 6.891051e-51 | -8.615850e-47 |
| Msa0865030 | Msa0933380 | 0.813232 | 2.840323e-51 | -8.615850e-47 |
| Msa0877710 | Msa0933380 | 0.802664 | 5.040516e-49 | -8.615850e-47 |
| Msa0880730 | Msa0933380 | 0.801311 | 9.560377e-49 | -8.615850e-47 |
| Msa0880810 | Msa0933380 | 0.812996 | 3.199540e-51 | -8.615850e-47 |
| Msa0890550 | Msa0933380 | 0.802573 | 5.261765e-49 | -8.615850e-47 |
| Msa0892640 | Msa0933380 | 0.847022 | 1.504314e-59 | -8.615850e-47 |
| Msa0897200 | Msa0933380 | 0.820960 | 5.203837e-53 | -8.615850e-47 |
| Msa0918390 | Msa0933380 | 0.819129 | 1.365496e-52 | -8.615850e-47 |
| Msa0923780 | Msa0933380 | 0.833172 | 6.213403e-56 | -8.615850e-47 |
| Msa0933380 | Msa0934140 | 0.801987 | 6.948198e-49 | -8.615850e-47 |
| Msa0933380 | Msa0944200 | 0.850118 | 2.087839e-60 | -8.615850e-47 |
| Msa0933380 | Msa0958000 | 0.879323 | 1.368762e-69 | -8.615850e-47 |
| Msa0933380 | Msa0962840 | 0.801582 | 8.411112e-49 | -8.615850e-47 |
| Msa0933380 | Msa0969370 | 0.812886 | 3.383179e-51 | -8.615850e-47 |
| Msa0933380 | Msa0970530 | 0.808096 | 3.662784e-50 | -8.615850e-47 |
| Msa0933380 | Msa0970600 | 0.815762 | 7.830005e-52 | -8.615850e-47 |
| Msa0933380 | Msa0971160 | 0.982360 | 6.816701e-155 | -8.615850e-47 |
| Msa0933380 | Msa0974950 | 0.859565 | 3.789331e-63 | -8.615850e-47 |
| Msa0933380 | Msa0980540 | 0.808756 | 2.648571e-50 | -8.615850e-47 |
| Msa0933380 | Msa0994370 | 0.859811 | 3.195283e-63 | -8.615850e-47 |
| Msa0933380 | Msa0997430 | 0.810863 | 9.327861e-51 | -8.615850e-47 |
| Msa0933380 | Msa1021520 | 0.819370 | 1.203472e-52 | -8.615850e-47 |
| Msa0933380 | Msa1027250 | 0.811429 | 7.031360e-51 | -8.615850e-47 |
| Msa0933380 | Msa1027300 | 0.818882 | 1.554172e-52 | -8.615850e-47 |
| Msa0933380 | Msa1027360 | 0.810524 | 1.104524e-50 | -8.615850e-47 |
| Msa0933380 | Msa1029050 | 0.828428 | 9.042226e-55 | -8.615850e-47 |
| Msa0933380 | Msa1029070 | 0.803609 | 3.212153e-49 | -8.615850e-47 |
| Msa0933380 | Msa1037520 | 0.836776 | 7.675003e-57 | -8.615850e-47 |
| Msa0933380 | Msa1042660 | 0.829077 | 6.296365e-55 | -8.615850e-47 |
| Msa0933380 | Msa1060260 | 0.801508 | 8.709912e-49 | -8.615850e-47 |
| Msa0933380 | Msa1063420 | 0.803503 | 3.378968e-49 | -8.615850e-47 |
| Msa0933380 | Msa1071320 | 0.816921 | 4.309298e-52 | -8.615850e-47 |
| Msa0933380 | Msa1072900 | 0.824824 | 6.548075e-54 | -8.615850e-47 |
| Msa0933380 | Msa1081790 | -0.820213 | 7.722438e-53 | -8.615850e-47 |
| Msa0933380 | Msa1081930 | 0.808490 | 3.019311e-50 | -8.615850e-47 |
| Msa0933380 | Msa1089320 | 0.824861 | 6.417266e-54 | -8.615850e-47 |
| Msa0933380 | Msa1089450 | 0.827919 | 1.198756e-54 | -8.615850e-47 |
| Msa0933380 | Msa1089460 | 0.808941 | 2.418482e-50 | -8.615850e-47 |
| Msa0933380 | Msa1109680 | 0.807213 | 5.641162e-50 | -8.615850e-47 |
| Msa0933380 | Msa1123350 | 0.800842 | 1.192324e-48 | -8.615850e-47 |
| Msa0933380 | Msa1126830 | 0.829052 | 6.387741e-55 | -8.615850e-47 |
| Msa0933380 | Msa1127590 | 0.807122 | 5.897349e-50 | -8.615850e-47 |
| Msa0933380 | Msa1130400 | 0.842239 | 2.918903e-58 | -8.615850e-47 |
| Msa0933380 | Msa1140150 | 0.821447 | 4.018829e-53 | -8.615850e-47 |
| Msa0933380 | Msa1165270 | 0.802821 | 4.677126e-49 | -8.615850e-47 |
| Msa0933380 | Msa1165780 | 0.853588 | 2.163358e-61 | -8.615850e-47 |
| Msa0933380 | Msa1166090 | -0.817593 | 3.042612e-52 | -8.615850e-47 |
| Msa0933380 | Msa1200320 | 0.818499 | 1.898436e-52 | -8.615850e-47 |
| Msa0933380 | Msa1201810 | 0.806962 | 6.374250e-50 | -8.615850e-47 |
| Msa0933380 | Msa1202580 | 0.811375 | 7.224491e-51 | -8.615850e-47 |
| Msa0933380 | Msa1205590 | 0.808624 | 2.826632e-50 | -8.615850e-47 |
| Msa0933380 | Msa1206270 | 0.843452 | 1.389473e-58 | -8.615850e-47 |
| Msa0933380 | Msa1206290 | 0.813770 | 2.163184e-51 | -8.615850e-47 |
| Msa0933380 | Msa1211830 | 0.811124 | 8.190474e-51 | -8.615850e-47 |
| Msa0933380 | Msa1212950 | 0.811007 | 8.680713e-51 | -8.615850e-47 |
| Msa0933380 | Msa1218500 | 0.809711 | 1.652831e-50 | -8.615850e-47 |
| Msa0933380 | Msa1218580 | 0.812693 | 3.728792e-51 | -8.615850e-47 |
| Msa0933380 | Msa1233850 | 0.809281 | 2.045061e-50 | -8.615850e-47 |
| Msa0933380 | Msa1248830 | 0.811349 | 7.320501e-51 | -8.615850e-47 |
| Msa0933380 | Msa1253800 | 0.806044 | 9.958496e-50 | -8.615850e-47 |
| Msa0933380 | Msa1254730 | 0.841812 | 3.786248e-58 | -8.615850e-47 |
| Msa0933380 | Msa1256470 | 0.806478 | 8.068502e-50 | -8.615850e-47 |
| Msa0933380 | Msa1256810 | 0.817172 | 3.785257e-52 | -8.615850e-47 |
| Msa0933380 | Msa1262720 | 0.805135 | 1.544859e-49 | -8.615850e-47 |
| Msa0933380 | Msa1262890 | 0.868774 | 5.086267e-66 | -8.615850e-47 |
| Msa0933380 | Msa1264210 | 0.801073 | 1.069168e-48 | -8.615850e-47 |
| Msa0933380 | Msa1265590 | 0.805919 | 1.058156e-49 | -8.615850e-47 |
| Msa0933380 | Msa1270660 | 0.800364 | 1.492399e-48 | -8.615850e-47 |
| Msa0933380 | Msa1271130 | 0.841670 | 4.128911e-58 | -8.615850e-47 |
| Msa0933380 | Msa1278900 | 0.801095 | 1.058131e-48 | -8.615850e-47 |
| Msa0933380 | Msa1294820 | 0.819068 | 1.410310e-52 | -8.615850e-47 |
| Msa0933380 | Msa1296830 | 0.851082 | 1.118647e-60 | -8.615850e-47 |
| Msa0933380 | Msa1303580 | 0.804292 | 2.316915e-49 | -8.615850e-47 |
| Msa0933380 | Msa1307180 | 0.824165 | 9.357053e-54 | -8.615850e-47 |
| Msa0933380 | Msa1310800 | -0.823640 | 1.242036e-53 | -8.615850e-47 |
| Msa0933380 | Msa1316360 | 0.834460 | 2.959749e-56 | -8.615850e-47 |
| Msa0933380 | Msa1332590 | 0.819339 | 1.223038e-52 | -8.615850e-47 |
| Msa0933380 | Msa1336560 | 0.850950 | 1.218930e-60 | -8.615850e-47 |
| Msa0933380 | Msa1337170 | 0.802915 | 4.472873e-49 | -8.615850e-47 |
| Msa0933380 | Msa1342630 | 0.844283 | 8.320260e-59 | -8.615850e-47 |
| Msa0933380 | Msa1351540 | 0.856577 | 2.927766e-62 | -8.615850e-47 |
| Msa0933380 | Msa1357890 | 0.813349 | 2.677974e-51 | -8.615850e-47 |
| Msa0933380 | Msa1359270 | 0.819913 | 9.045287e-53 | -8.615850e-47 |
| Msa0933380 | Msa1362420 | 0.828220 | 1.014843e-54 | -8.615850e-47 |
| Msa0933380 | Msa1364210 | 0.824643 | 7.222938e-54 | -8.615850e-47 |
| Msa0933380 | Msa1365800 | 0.809539 | 1.800335e-50 | -8.615850e-47 |
| Msa0933380 | Msa1368530 | 0.814614 | 1.408758e-51 | -8.615850e-47 |
| Msa0933380 | Msa1370590 | 0.839793 | 1.281162e-57 | -8.615850e-47 |
| Msa0933380 | Msa1376650 | 0.828212 | 1.019464e-54 | -8.615850e-47 |
| Msa0933380 | Msa1381350 | 0.809144 | 2.187740e-50 | -8.615850e-47 |
| Msa0933380 | Msa1381650 | 0.807434 | 5.063683e-50 | -8.615850e-47 |
| Msa0933380 | Msa1384100 | 0.843986 | 9.999291e-59 | -8.615850e-47 |
| Msa0933380 | Msa1396400 | -0.814488 | 1.501949e-51 | -8.615850e-47 |
| Msa0933380 | Msa1398090 | 0.811956 | 5.401828e-51 | -8.615850e-47 |
| Msa0933380 | Msa1407970 | 0.802222 | 6.214942e-49 | -8.615850e-47 |
| Msa0933380 | Msa1411950 | 0.807066 | 6.060674e-50 | -8.615850e-47 |
| Msa0933380 | Msa1419870 | 0.806444 | 8.203821e-50 | -8.615850e-47 |
| Msa0933380 | Msa1422810 | 0.829785 | 4.238881e-55 | -8.615850e-47 |
| Msa0933380 | Msa1428780 | 0.821536 | 3.832332e-53 | -8.615850e-47 |
| Msa0933380 | Msa1433600 | 0.811727 | 6.059404e-51 | -8.615850e-47 |
| Msa0933380 | Msa1434090 | 0.802658 | 5.054105e-49 | -8.615850e-47 |
| Msa0933380 | Msa1435390 | 0.801357 | 9.355401e-49 | -8.615850e-47 |
| Msa0933380 | Msa1436520 | 0.817579 | 3.065572e-52 | -8.615850e-47 |
| Msa0933380 | Msa1436600 | 0.807199 | 5.679806e-50 | -8.615850e-47 |
| Msa0933380 | Msa1444120 | 0.845428 | 4.085587e-59 | -8.615850e-47 |
| Msa0933380 | Msa1446080 | 0.841591 | 4.329383e-58 | -8.615850e-47 |
| Msa0933380 | Msa1447890 | 0.800120 | 1.672795e-48 | -8.615850e-47 |
| Msa0933380 | Msa1453880 | 0.809111 | 2.224057e-50 | -8.615850e-47 |
| Msa0933380 | Msa1454680 | 0.867559 | 1.251782e-65 | -8.615850e-47 |
| Msa0933380 | Msa1457220 | 0.815535 | 8.795130e-52 | -8.615850e-47 |
| Msa0933380 | Msa1458090 | 0.831531 | 1.583618e-55 | -8.615850e-47 |
| Msa0933380 | Msa1458290 | 0.808104 | 3.648111e-50 | -8.615850e-47 |
| Msa0933380 | Msa1458810 | 0.802027 | 6.814909e-49 | -8.615850e-47 |
| Msa0933380 | Msa1459960 | 0.808466 | 3.054323e-50 | -8.615850e-47 |
| Msa0933380 | Msa1460320 | -0.834958 | 2.217983e-56 | -8.615850e-47 |
| Msa0933380 | Msa1462290 | 0.800036 | 1.740194e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0933380 | MtrunA17_Chr6g0450081 | 100.000 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 1.76e-135 | 375 |
| Msa0933380 | MtrunA17_Chr5g0413451 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 7.56e-135 | 374 |
| Msa0933380 | MtrunA17_Chr5g0413441 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 7.56e-135 | 374 |
| Msa0933380 | MtrunA17_Chr7g0270301 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 9.95e-135 | 374 |
| Msa0933380 | MtrunA17_Chr1g0194261 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.15e-134 | 373 |
| Msa0933380 | MtrunA17_Chr5g0401761 | 86.667 | 180 | 24 | 0 | 1 | 180 | 1 | 180 | 7.52e-120 | 336 |
| Msa0933380 | MtrunA17_Chr4g0072861 | 63.128 | 179 | 66 | 0 | 1 | 179 | 1 | 179 | 8.16e-85 | 248 |
| Msa0933380 | MtrunA17_Chr5g0395631 | 61.582 | 177 | 68 | 0 | 1 | 177 | 1 | 177 | 3.55e-83 | 244 |
| Msa0933380 | MtrunA17_Chr4g0039591 | 60.452 | 177 | 70 | 0 | 1 | 177 | 1 | 177 | 1.53e-80 | 237 |
| Msa0933380 | MtrunA17_Chr5g0395641 | 55.495 | 182 | 79 | 1 | 1 | 180 | 1 | 182 | 1.54e-75 | 224 |
| Msa0933380 | MtrunA17_Chr1g0188111 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.03e-67 | 204 |
| Msa0933380 | MtrunA17_Chr8g0373271 | 49.091 | 165 | 81 | 3 | 18 | 180 | 17 | 180 | 2.13e-50 | 160 |
| Msa0933380 | MtrunA17_Chr2g0287721 | 34.831 | 178 | 105 | 2 | 5 | 173 | 5 | 180 | 3.69e-37 | 127 |
| Msa0933380 | MtrunA17_Chr5g0434561 | 34.091 | 176 | 113 | 2 | 1 | 173 | 1 | 176 | 7.03e-31 | 110 |
| Msa0933380 | MtrunA17_Chr5g0395651 | 63.291 | 79 | 27 | 1 | 1 | 77 | 1 | 79 | 1.28e-30 | 106 |
| Msa0933380 | MtrunA17_Chr5g0401071 | 32.609 | 184 | 121 | 2 | 1 | 181 | 1 | 184 | 1.49e-30 | 110 |
| Msa0933380 | MtrunA17_Chr4g0012371 | 31.707 | 164 | 111 | 1 | 18 | 180 | 1 | 164 | 1.72e-26 | 99.0 |
| Msa0933380 | MtrunA17_Chr2g0294701 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 8.48e-25 | 95.5 |
| Msa0933380 | MtrunA17_Chr7g0271761 | 31.073 | 177 | 106 | 2 | 15 | 177 | 18 | 192 | 2.17e-24 | 94.4 |
| Msa0933380 | MtrunA17_Chr4g0068171 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 6.03e-23 | 90.5 |
| Msa0933380 | MtrunA17_Chr5g0395671 | 51.020 | 49 | 24 | 0 | 132 | 180 | 44 | 92 | 1.10e-12 | 61.2 |
| Msa0933380 | MtrunA17_Chr1g0180291 | 34.118 | 85 | 52 | 1 | 18 | 98 | 15 | 99 | 2.11e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0933380 | AT1G10630.1 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 3.16e-134 | 373 |
| Msa0933380 | AT1G10630.2 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 3.16e-134 | 373 |
| Msa0933380 | AT5G14670.2 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 4.35e-134 | 372 |
| Msa0933380 | AT5G14670.3 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 4.35e-134 | 372 |
| Msa0933380 | AT2G47170.2 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 7.87e-134 | 372 |
| Msa0933380 | AT2G47170.1 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 7.87e-134 | 372 |
| Msa0933380 | AT2G47170.3 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 7.87e-134 | 372 |
| Msa0933380 | AT1G23490.1 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.16e-133 | 370 |
| Msa0933380 | AT1G70490.2 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.16e-133 | 370 |
| Msa0933380 | AT1G70490.7 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.16e-133 | 370 |
| Msa0933380 | AT1G70490.4 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.16e-133 | 370 |
| Msa0933380 | AT1G70490.3 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.16e-133 | 370 |
| Msa0933380 | AT1G70490.1 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.16e-133 | 370 |
| Msa0933380 | AT1G70490.6 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.16e-133 | 370 |
| Msa0933380 | AT1G70490.5 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.16e-133 | 370 |
| Msa0933380 | AT5G14670.1 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.85e-133 | 370 |
| Msa0933380 | AT3G62290.3 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 1.25e-132 | 369 |
| Msa0933380 | AT3G62290.1 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 1.25e-132 | 369 |
| Msa0933380 | AT3G62290.2 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 1.25e-132 | 369 |
| Msa0933380 | AT2G15310.1 | 66.851 | 181 | 60 | 0 | 1 | 181 | 1 | 181 | 2.11e-90 | 263 |
| Msa0933380 | AT2G24765.1 | 62.011 | 179 | 68 | 0 | 1 | 179 | 1 | 179 | 4.11e-85 | 249 |
| Msa0933380 | AT3G03120.1 | 60.452 | 177 | 70 | 0 | 1 | 177 | 1 | 177 | 3.87e-81 | 239 |
| Msa0933380 | AT5G17060.2 | 59.322 | 177 | 72 | 0 | 1 | 177 | 1 | 177 | 3.91e-81 | 239 |
| Msa0933380 | AT5G17060.1 | 59.322 | 177 | 72 | 0 | 1 | 177 | 1 | 177 | 3.91e-81 | 239 |
| Msa0933380 | AT3G22950.1 | 53.039 | 181 | 85 | 0 | 1 | 181 | 1 | 181 | 1.21e-70 | 212 |
| Msa0933380 | AT3G22950.2 | 53.039 | 181 | 85 | 0 | 1 | 181 | 1 | 181 | 1.21e-70 | 212 |
| Msa0933380 | AT2G24765.2 | 64.844 | 128 | 45 | 0 | 1 | 128 | 1 | 128 | 1.14e-60 | 185 |
| Msa0933380 | AT3G03120.2 | 63.077 | 130 | 48 | 0 | 1 | 130 | 1 | 130 | 4.66e-60 | 183 |
| Msa0933380 | AT1G02430.1 | 48.936 | 188 | 82 | 5 | 1 | 176 | 1 | 186 | 9.97e-57 | 177 |
| Msa0933380 | AT1G02440.1 | 46.237 | 186 | 90 | 4 | 1 | 176 | 1 | 186 | 7.18e-56 | 175 |
| Msa0933380 | AT2G18390.1 | 49.091 | 165 | 81 | 3 | 18 | 180 | 17 | 180 | 1.16e-49 | 159 |
| Msa0933380 | AT1G02430.2 | 47.205 | 161 | 75 | 4 | 1 | 153 | 1 | 159 | 5.33e-45 | 146 |
| Msa0933380 | AT5G52210.1 | 34.091 | 176 | 109 | 1 | 5 | 173 | 5 | 180 | 7.10e-36 | 124 |
| Msa0933380 | AT5G52210.2 | 34.091 | 176 | 109 | 1 | 5 | 173 | 5 | 180 | 7.10e-36 | 124 |
| Msa0933380 | AT3G49870.1 | 33.880 | 183 | 118 | 2 | 1 | 180 | 1 | 183 | 1.14e-32 | 115 |
| Msa0933380 | AT5G67560.1 | 33.742 | 163 | 107 | 1 | 12 | 173 | 14 | 176 | 2.47e-31 | 112 |
| Msa0933380 | AT5G37680.1 | 32.955 | 176 | 115 | 2 | 1 | 173 | 1 | 176 | 5.04e-30 | 108 |
| Msa0933380 | AT3G49870.2 | 32.927 | 164 | 109 | 1 | 18 | 180 | 1 | 164 | 1.95e-29 | 107 |
| Msa0933380 | AT3G49860.1 | 33.133 | 166 | 110 | 1 | 16 | 180 | 10 | 175 | 7.49e-29 | 105 |
| Msa0933380 | AT1G02440.2 | 33.766 | 154 | 66 | 3 | 1 | 153 | 1 | 119 | 1.06e-26 | 98.6 |
| Msa0933380 | AT1G09180.1 | 32.961 | 179 | 104 | 2 | 13 | 177 | 16 | 192 | 3.35e-25 | 96.7 |
| Msa0933380 | AT3G62560.1 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 1.34e-24 | 95.1 |
| Msa0933380 | AT5G37680.2 | 32.812 | 128 | 86 | 0 | 46 | 173 | 2 | 129 | 4.31e-24 | 92.4 |
| Msa0933380 | AT1G56330.1 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 5.16e-24 | 93.6 |
| Msa0933380 | AT4G02080.1 | 31.073 | 177 | 106 | 2 | 15 | 177 | 18 | 192 | 5.38e-24 | 93.6 |
Find 66 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGACATTTGAACAATTT+TGG | 0.068203 | 6_3:-1862280 | Msa0933380:three_prime_UTR |
| CTAATACTATTAGCTGTAAT+TGG | 0.259456 | 6_3:-1862115 | Msa0933380:three_prime_UTR |
| CAGAGCACTTGTGCAACTTC+TGG | 0.283751 | 6_3:-1862680 | Msa0933380:CDS |
| GGAACTCCTGCAATCTGTTT+TGG | 0.301867 | 6_3:-1862094 | Msa0933380:three_prime_UTR |
| TTGCAAGACAAAATTATTAC+TGG | 0.314647 | 6_3:+1861998 | None:intergenic |
| AAATAAGACCCTGAGTGTTC+TGG | 0.332007 | 6_3:+1863673 | None:intergenic |
| GCTTCACCGTGTGGGATGTC+GGG | 0.356155 | 6_3:-1864263 | Msa0933380:CDS |
| TTCTCCTCGTCAGTGTTACT+TGG | 0.359242 | 6_3:-1862161 | Msa0933380:three_prime_UTR |
| CAGTAGGTTGTTTGCGAAGA+AGG | 0.366217 | 6_3:-1866517 | Msa0933380:CDS |
| ATCTGATCATTTCCTGAGTC+TGG | 0.369808 | 6_3:-1862252 | Msa0933380:three_prime_UTR |
| AGAGGGTCTTTACGAGGGTT+TGG | 0.373805 | 6_3:-1862657 | Msa0933380:CDS |
| TCTGCAGCATTCATTGCATT+TGG | 0.388382 | 6_3:+1862949 | None:intergenic |
| TCAAGTCAATATTGTAATAG+AGG | 0.389229 | 6_3:-1862201 | Msa0933380:three_prime_UTR |
| AGCTTCACCGTGTGGGATGT+CGG | 0.397098 | 6_3:-1864264 | Msa0933380:CDS |
| GCGATTTGTGTAGGTGAAGA+TGG | 0.448083 | 6_3:-1866562 | Msa0933380:exon |
| GGCACACCAAAACAGATTGC+AGG | 0.470039 | 6_3:+1862088 | None:intergenic |
| CGATTTGTGTAGGTGAAGAT+GGG | 0.477607 | 6_3:-1866561 | Msa0933380:exon |
| ATTCTCTCCGCCAACGCCAC+TGG | 0.484693 | 6_3:-1862903 | Msa0933380:intron |
| CTTCACCGTGTGGGATGTCG+GGG | 0.486668 | 6_3:-1864262 | Msa0933380:CDS |
| GGAAGTAATGCCTCCACAAT+GGG | 0.487329 | 6_3:+1863694 | None:intergenic |
| TTCTAACAACATTGCAAGCA+AGG | 0.487356 | 6_3:-1862627 | Msa0933380:intron |
| CGATAGAGACCGAGTGGTTG+AGG | 0.489067 | 6_3:-1863634 | Msa0933380:CDS |
| ATTTGGAAGATCTTGTTTGT+TGG | 0.492492 | 6_3:+1862966 | None:intergenic |
| CTTCATACCAGTGGCGTTGG+CGG | 0.492667 | 6_3:+1862896 | None:intergenic |
| TATCGGTTGAATAATTCTGC+AGG | 0.502779 | 6_3:-1862040 | Msa0933380:three_prime_UTR |
| AGACCGAGTGGTTGAGGCAA+GGG | 0.502924 | 6_3:-1863628 | Msa0933380:CDS |
| AAATGAGAATGTTTATGATA+CGG | 0.510550 | 6_3:+1867015 | None:intergenic |
| TATTACAATATTGACTTGAA+AGG | 0.517328 | 6_3:+1862205 | None:intergenic |
| TCTCCTCGTCAGTGTTACTT+GGG | 0.529673 | 6_3:-1862160 | Msa0933380:three_prime_UTR |
| GTCTTTACGAGGGTTTGGAC+TGG | 0.530184 | 6_3:-1862652 | Msa0933380:CDS |
| AGTCTGGTGGTTCTTGAAGA+AGG | 0.539082 | 6_3:-1862236 | Msa0933380:three_prime_UTR |
| CGTTCACGAAGCTGTTCAGT+AGG | 0.541353 | 6_3:-1866533 | Msa0933380:CDS |
| GTTACTACCATCCCTACCAT+TGG | 0.542784 | 6_3:-1866417 | Msa0933380:intron |
| ATGGTAGGTCTCGATGCGGC+TGG | 0.552532 | 6_3:-1866480 | Msa0933380:CDS |
| GCAGAAATAACTGACAAACT+TGG | 0.552853 | 6_3:-1862931 | Msa0933380:CDS |
| TGATCATTTCCTGAGTCTGG+TGG | 0.556032 | 6_3:-1862249 | Msa0933380:three_prime_UTR |
| CTTCAAGAACCACCAGACTC+AGG | 0.557629 | 6_3:+1862240 | None:intergenic |
| ATCTGCAGATTCGCCCATTG+TGG | 0.557688 | 6_3:-1863707 | Msa0933380:intron |
| CATCCCTTGCCTCAACCACT+CGG | 0.565995 | 6_3:+1863625 | None:intergenic |
| GATCTTCATACCAGTGGCGT+TGG | 0.567883 | 6_3:+1862893 | None:intergenic |
| AACTAGTAAAATTAACATGA+AGG | 0.568565 | 6_3:+1862067 | None:intergenic |
| GAATTGAACTAACCAATGGT+AGG | 0.570340 | 6_3:+1866405 | None:intergenic |
| TTCTGGAGAGGGTCTTTACG+AGG | 0.571595 | 6_3:-1862663 | Msa0933380:CDS |
| AATTGAACTAACCAATGGTA+GGG | 0.580228 | 6_3:+1866406 | None:intergenic |
| GCTGATGTTCTTGTACTCCA+CGG | 0.581443 | 6_3:+1864284 | None:intergenic |
| GAACTAACCAATGGTAGGGA+TGG | 0.581870 | 6_3:+1866410 | None:intergenic |
| TGCAGATTCGCCCATTGTGG+AGG | 0.584506 | 6_3:-1863704 | Msa0933380:intron |
| AGGCAAGGGATGAATTGCAC+AGG | 0.586704 | 6_3:-1863614 | Msa0933380:CDS |
| TGGAAGTAATGCCTCCACAA+TGG | 0.593003 | 6_3:+1863693 | None:intergenic |
| GAGACCGAGTGGTTGAGGCA+AGG | 0.594397 | 6_3:-1863629 | Msa0933380:CDS |
| CACTTGTGCAACTTCTGGAG+AGG | 0.598038 | 6_3:-1862675 | Msa0933380:CDS |
| ACTTGTGCAACTTCTGGAGA+GGG | 0.603681 | 6_3:-1862674 | Msa0933380:CDS |
| TGGATCTCAGCGATTTGTGT+AGG | 0.607269 | 6_3:-1866571 | Msa0933380:intron |
| GCATTACTTCCAGAACACTC+AGG | 0.609319 | 6_3:-1863682 | Msa0933380:CDS |
| AGGATTTAATGTTGAAACCG+TGG | 0.626322 | 6_3:-1864301 | Msa0933380:CDS |
| GAACATCAGCTTCACCGTGT+GGG | 0.628419 | 6_3:-1864271 | Msa0933380:CDS |
| CATTACTTCCAGAACACTCA+GGG | 0.632210 | 6_3:-1863681 | Msa0933380:CDS |
| TCTGGAGAGGGTCTTTACGA+GGG | 0.640167 | 6_3:-1862662 | Msa0933380:CDS |
| TTCACCGTGTGGGATGTCGG+GGG | 0.658294 | 6_3:-1864261 | Msa0933380:CDS |
| AGAACATCAGCTTCACCGTG+TGG | 0.663793 | 6_3:-1864272 | Msa0933380:CDS |
| TCAGCAAGTACAATGAACAT+CGG | 0.673187 | 6_3:-1861880 | Msa0933380:three_prime_UTR |
| GATTTGTGTAGGTGAAGATG+GGG | 0.682756 | 6_3:-1866560 | Msa0933380:exon |
| ATTGCACAGGATGTTGAATG+AGG | 0.696400 | 6_3:-1863601 | Msa0933380:intron |
| TTTGATGGTAGGTCTCGATG+CGG | 0.707868 | 6_3:-1866484 | Msa0933380:CDS |
| TAGCAACGATAGAGACCGAG+TGG | 0.728607 | 6_3:-1863640 | Msa0933380:CDS |
| AAACCCAAGTAACACTGACG+AGG | 0.733532 | 6_3:+1862157 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATGATAATTAAAATAAT+TGG | - | chr6_3:1862764-1862783 | Msa0933380:intron | 10.0% |
| !!! | AATGATTAGTTATTAATAAA+TGG | - | chr6_3:1864175-1864194 | Msa0933380:intron | 10.0% |
| !! | GTATATATCTATATAATAAT+TGG | - | chr6_3:1864585-1864604 | Msa0933380:intron | 10.0% |
| !!! | ACAAAATATAATATTTTTAG+AGG | + | chr6_3:1865447-1865466 | None:intergenic | 10.0% |
| !!! | AAATATTATATTTTGTTTTC+GGG | - | chr6_3:1865451-1865470 | Msa0933380:intron | 10.0% |
| !! | TTACTATTATACATAATTAA+AGG | - | chr6_3:1865821-1865840 | Msa0933380:intron | 10.0% |
| !! | ATGTATTATTTGTATATATA+AGG | - | chr6_3:1866584-1866603 | Msa0933380:intron | 10.0% |
| !! | TGTATTATTTGTATATATAA+GGG | - | chr6_3:1866585-1866604 | Msa0933380:intron | 10.0% |
| !! | TAAAAATCAATATTGAGAAA+GGG | + | chr6_3:1862546-1862565 | None:intergenic | 15.0% |
| !! | ATCTACATAATTATAACATA+AGG | + | chr6_3:1862675-1862694 | None:intergenic | 15.0% |
| !!! | TCACATCATATTTAATTTAA+TGG | + | chr6_3:1862882-1862901 | None:intergenic | 15.0% |
| !!! | TTTAAATATCTAAAACAAAC+AGG | + | chr6_3:1862996-1863015 | None:intergenic | 15.0% |
| !! | TATTAATAACTAATCATTAG+TGG | + | chr6_3:1864173-1864192 | None:intergenic | 15.0% |
| !!! | ACATTTTTTTCAATATAATG+AGG | - | chr6_3:1865181-1865200 | Msa0933380:intron | 15.0% |
| !!! | CATTTTTTTCAATATAATGA+GGG | - | chr6_3:1865182-1865201 | Msa0933380:intron | 15.0% |
| !!! | AATATTATATTTTGTTTTCG+GGG | - | chr6_3:1865452-1865471 | Msa0933380:intron | 15.0% |
| !! | ATATTGGAAATATATAATGT+TGG | - | chr6_3:1865872-1865891 | Msa0933380:intron | 15.0% |
| !! | GTATTATTTGTATATATAAG+GGG | - | chr6_3:1866586-1866605 | Msa0933380:intron | 15.0% |
| !!! | TTTTTTTATGTTAATAACTC+AGG | - | chr6_3:1866619-1866638 | Msa0933380:intron | 15.0% |
| !!! | AATTTTACTAGTTTGATTAT+CGG | - | chr6_3:1866869-1866888 | Msa0933380:intron | 15.0% |
| !!! | TTTTTGTTATAAGATGTAAA+AGG | - | chr6_3:1866990-1867009 | Msa0933380:five_prime_UTR | 15.0% |
| !! | AAATGAGAATGTTTATGATA+CGG | + | chr6_3:1861914-1861933 | None:intergenic | 20.0% |
| !!! | GATTGAATTGATGAATTTTT+TGG | - | chr6_3:1862293-1862312 | Msa0933380:intron | 20.0% |
| !!! | ATTTTGATGATTGATGATTA+TGG | - | chr6_3:1862326-1862345 | Msa0933380:intron | 20.0% |
| !!! | ATTTTGTATAAATTGAAGCT+TGG | - | chr6_3:1862479-1862498 | Msa0933380:intron | 20.0% |
| !! | GTAAAAATCAATATTGAGAA+AGG | + | chr6_3:1862547-1862566 | None:intergenic | 20.0% |
| !!! | ATCTCAATGATAAATTTTAC+AGG | + | chr6_3:1862709-1862728 | None:intergenic | 20.0% |
| !! | ATAATTAAAATAATTGGTCG+TGG | - | chr6_3:1862770-1862789 | Msa0933380:intron | 20.0% |
| !! | CATAACTAAAACATCAAAAT+TGG | + | chr6_3:1863021-1863040 | None:intergenic | 20.0% |
| !! | AAATGAGATGTAAAATAGTT+AGG | - | chr6_3:1863276-1863295 | Msa0933380:intron | 20.0% |
| !!! | TAAAATAGTTAGGCATATTT+TGG | - | chr6_3:1863286-1863305 | Msa0933380:intron | 20.0% |
| !!! | AGAACAATAAATTTTTCAAC+TGG | - | chr6_3:1863364-1863383 | Msa0933380:intron | 20.0% |
| !!! | GAACAATAAATTTTTCAACT+GGG | - | chr6_3:1863365-1863384 | Msa0933380:intron | 20.0% |
| !!! | TATTTATGCATGTTTGTTAA+AGG | - | chr6_3:1863415-1863434 | Msa0933380:intron | 20.0% |
| !! | ATATATTAATCCATTATGCA+GGG | + | chr6_3:1863484-1863503 | None:intergenic | 20.0% |
| !! | ATACTATAACATCTTCTAAA+TGG | + | chr6_3:1863541-1863560 | None:intergenic | 20.0% |
| !! | ATAAAACCAAGTTGTATAAA+CGG | + | chr6_3:1864201-1864220 | None:intergenic | 20.0% |
| !!! | TATACAACTTGGTTTTATTA+TGG | - | chr6_3:1864203-1864222 | Msa0933380:intron | 20.0% |
| !! | TATTATGGTAATAAAACTAC+TGG | - | chr6_3:1864218-1864237 | Msa0933380:intron | 20.0% |
| !! | GTTAAAATTCAGAAATTTGA+AGG | + | chr6_3:1864284-1864303 | None:intergenic | 20.0% |
| !! | TAAAGTTGTTAGATAAAGAT+CGG | + | chr6_3:1864352-1864371 | None:intergenic | 20.0% |
| !!! | TATTTATTCTTGTTTGTTTC+TGG | - | chr6_3:1864719-1864738 | Msa0933380:intron | 20.0% |
| !!! | TATTCCATTACAATGTTTTT+TGG | - | chr6_3:1865152-1865171 | Msa0933380:intron | 20.0% |
| !!! | ATTCCATTACAATGTTTTTT+GGG | - | chr6_3:1865153-1865172 | Msa0933380:intron | 20.0% |
| !!! | ATATTATATTTTGTTTTCGG+GGG | - | chr6_3:1865453-1865472 | Msa0933380:intron | 20.0% |
| !!! | ATTATTTTTGCTAGTTTTCT+GGG | + | chr6_3:1865572-1865591 | None:intergenic | 20.0% |
| !!! | AATTATTTTTGCTAGTTTTC+TGG | + | chr6_3:1865573-1865592 | None:intergenic | 20.0% |
| !!! | TTTTATTGTAGGTTTGTTTT+TGG | - | chr6_3:1865685-1865704 | Msa0933380:intron | 20.0% |
| !! | AAAATGCTAAATCATAATTG+AGG | + | chr6_3:1866120-1866139 | None:intergenic | 20.0% |
| !!! | ATTATGATTTAGCATTTTCT+TGG | - | chr6_3:1866122-1866141 | Msa0933380:intron | 20.0% |
| !!! | TTATGATTTAGCATTTTCTT+GGG | - | chr6_3:1866123-1866142 | Msa0933380:intron | 20.0% |
| !! | ATTGTATTATAAGTATGCAA+AGG | - | chr6_3:1866464-1866483 | Msa0933380:CDS | 20.0% |
| !!! | TATTACAATATTGACTTGAA+AGG | + | chr6_3:1866724-1866743 | None:intergenic | 20.0% |
| !! | AACTAGTAAAATTAACATGA+AGG | + | chr6_3:1866862-1866881 | None:intergenic | 20.0% |
| ! | AACAAAATATTCCCACTTAT+AGG | - | chr6_3:1862730-1862749 | Msa0933380:intron | 25.0% |
| ! | AGCATAAGATATTCTCAAAT+TGG | - | chr6_3:1863107-1863126 | Msa0933380:intron | 25.0% |
| ! | TATATTAATCCATTATGCAG+GGG | + | chr6_3:1863483-1863502 | None:intergenic | 25.0% |
| ! | CATATATTAATCCATTATGC+AGG | + | chr6_3:1863485-1863504 | None:intergenic | 25.0% |
| !! | ATGGATTAATATATGAAAGC+TGG | - | chr6_3:1863490-1863509 | Msa0933380:intron | 25.0% |
| !!! | TTCCATTTTAAAGATTGTGT+TGG | - | chr6_3:1864114-1864133 | Msa0933380:intron | 25.0% |
| !!! | TCCATTTTAAAGATTGTGTT+GGG | - | chr6_3:1864115-1864134 | Msa0933380:intron | 25.0% |
| !! | TCACAATTTCTAGATTTCAA+TGG | + | chr6_3:1864475-1864494 | None:intergenic | 25.0% |
| ! | GAAATCTAGAAATTGTGAAT+TGG | - | chr6_3:1864477-1864496 | Msa0933380:intron | 25.0% |
| ! | AATGTACATATGTCATCTTA+TGG | - | chr6_3:1864560-1864579 | Msa0933380:intron | 25.0% |
| !!! | TGGAACAATTTTTTATCTAC+AGG | - | chr6_3:1864605-1864624 | Msa0933380:intron | 25.0% |
| ! | TATACAAGCTTCTATAATGT+GGG | - | chr6_3:1864810-1864829 | Msa0933380:intron | 25.0% |
| ! | TATAAAAGAGGTAGGTAAAA+AGG | - | chr6_3:1864896-1864915 | Msa0933380:intron | 25.0% |
| ! | ATAAAAGAGGTAGGTAAAAA+GGG | - | chr6_3:1864897-1864916 | Msa0933380:intron | 25.0% |
| ! | AAACCCAAAAAACATTGTAA+TGG | + | chr6_3:1865159-1865178 | None:intergenic | 25.0% |
| ! | TCATACAAGATAAACAACAA+AGG | + | chr6_3:1865375-1865394 | None:intergenic | 25.0% |
| !! | ATCAACCAAGATTTTATTGT+AGG | - | chr6_3:1865674-1865693 | Msa0933380:intron | 25.0% |
| ! | ACAAACCTACAATAAAATCT+TGG | + | chr6_3:1865682-1865701 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGGTGTTCTTAA+TGG | - | chr6_3:1865697-1865716 | Msa0933380:intron | 25.0% |
| ! | TATGAATAAACAACAAGAGA+CGG | + | chr6_3:1865724-1865743 | None:intergenic | 25.0% |
| !! | AGTGATAGTCTTAAGTATAT+TGG | - | chr6_3:1865856-1865875 | Msa0933380:intron | 25.0% |
| ! | TCAAGTCATTGCATTAAAAA+TGG | + | chr6_3:1866209-1866228 | None:intergenic | 25.0% |
| ! | ATTTATTCCAGAAAAACAAG+AGG | + | chr6_3:1866446-1866465 | None:intergenic | 25.0% |
| ! | ATAAGTATGCAAAGGTTAAA+AGG | - | chr6_3:1866472-1866491 | Msa0933380:CDS | 25.0% |
| ! | AGGTTAAAAGGAAATATGTA+AGG | - | chr6_3:1866484-1866503 | Msa0933380:CDS | 25.0% |
| !! | ATGAGACATTTGAACAATTT+TGG | - | chr6_3:1866646-1866665 | Msa0933380:intron | 25.0% |
| !! | TGAGACATTTGAACAATTTT+GGG | - | chr6_3:1866647-1866666 | Msa0933380:intron | 25.0% |
| ! | TCAAGTCAATATTGTAATAG+AGG | - | chr6_3:1866725-1866744 | Msa0933380:intron | 25.0% |
| ! | CTAATACTATTAGCTGTAAT+TGG | - | chr6_3:1866811-1866830 | Msa0933380:intron | 25.0% |
| ! | TTGCAAGACAAAATTATTAC+TGG | + | chr6_3:1866931-1866950 | None:intergenic | 25.0% |
| ! | TCTTCTTATTGAATCGCTTT+TGG | - | chr6_3:1862129-1862148 | Msa0933380:three_prime_UTR | 30.0% |
| ! | ATTGATGATTATGGATCTTG+TGG | - | chr6_3:1862335-1862354 | Msa0933380:intron | 30.0% |
| AATTGAACTAACCAATGGTA+GGG | + | chr6_3:1862523-1862542 | None:intergenic | 30.0% | |
| TTAGTAACGATCCTATAAGT+GGG | + | chr6_3:1862744-1862763 | None:intergenic | 30.0% | |
| TTTAGTAACGATCCTATAAG+TGG | + | chr6_3:1862745-1862764 | None:intergenic | 30.0% | |
| AATAATTGGTCGTGGTATTA+AGG | - | chr6_3:1862778-1862797 | Msa0933380:intron | 30.0% | |
| TGGTATTAAGGCAAATTCTA+TGG | - | chr6_3:1862790-1862809 | Msa0933380:intron | 30.0% | |
| CACAAATTTATTTCCACCAT+TGG | - | chr6_3:1862842-1862861 | Msa0933380:intron | 30.0% | |
| GATGTGACTTTATGATCAAA+TGG | - | chr6_3:1862895-1862914 | Msa0933380:intron | 30.0% | |
| AAACAAACAGGCCTTTAATA+CGG | + | chr6_3:1862984-1863003 | None:intergenic | 30.0% | |
| CGTGTAAGATATTCTCAAAT+TGG | - | chr6_3:1863045-1863064 | Msa0933380:intron | 30.0% | |
| ! | TCTCATTTTGTTACTAGCAA+TGG | + | chr6_3:1863264-1863283 | None:intergenic | 30.0% |
| !! | TTCTTGCTGTCTCTTTTAAT+AGG | + | chr6_3:1863348-1863367 | None:intergenic | 30.0% |
| !!! | AATTTGACCCATTTTTCAAG+AGG | - | chr6_3:1863455-1863474 | Msa0933380:intron | 30.0% |
| !!! | ATTTGACCCATTTTTCAAGA+GGG | - | chr6_3:1863456-1863475 | Msa0933380:intron | 30.0% |
| GTTTGAATAGGAAAAGAAGA+TGG | + | chr6_3:1863753-1863772 | None:intergenic | 30.0% | |
| !! | GTAAAGAAAATGGGTATTGA+TGG | + | chr6_3:1863790-1863809 | None:intergenic | 30.0% |
| AAGTTGGCAGTAAAGAAAAT+GGG | + | chr6_3:1863799-1863818 | None:intergenic | 30.0% | |
| ! | TAAGTTGGCAGTAAAGAAAA+TGG | + | chr6_3:1863800-1863819 | None:intergenic | 30.0% |
| CTTCTAACACTATGAATTCT+TGG | + | chr6_3:1863847-1863866 | None:intergenic | 30.0% | |
| !! | TTGTACATGGTTTTACAATG+TGG | - | chr6_3:1863963-1863982 | Msa0933380:intron | 30.0% |
| TCCTAAAGATCATTGATCTA+CGG | + | chr6_3:1864048-1864067 | None:intergenic | 30.0% | |
| !! | CCATTTTAAAGATTGTGTTG+GGG | - | chr6_3:1864116-1864135 | Msa0933380:intron | 30.0% |
| TTTGAAGGATCTTTATCTCA+AGG | + | chr6_3:1864269-1864288 | None:intergenic | 30.0% | |
| TGTATTCAAAACGTGAACTT+AGG | - | chr6_3:1864314-1864333 | Msa0933380:intron | 30.0% | |
| !!! | TGTGTTTTTTGTTTGCGTTT+CGG | - | chr6_3:1864422-1864441 | Msa0933380:intron | 30.0% |
| TACATTAGAAACACAATGTG+TGG | + | chr6_3:1864546-1864565 | None:intergenic | 30.0% | |
| CTATACAAGCTTCTATAATG+TGG | - | chr6_3:1864809-1864828 | Msa0933380:intron | 30.0% | |
| ! | ACACTGTCACTTAATAATAG+TGG | + | chr6_3:1864872-1864891 | None:intergenic | 30.0% |
| TAAAAGAGGTAGGTAAAAAG+GGG | - | chr6_3:1864898-1864917 | Msa0933380:intron | 30.0% | |
| ATACCAAAAATGAAACGATG+TGG | + | chr6_3:1865026-1865045 | None:intergenic | 30.0% | |
| TTCGAACATCGATCAAAATA+AGG | + | chr6_3:1865060-1865079 | None:intergenic | 30.0% | |
| ! | CATTGTAATGGAATACACAT+GGG | + | chr6_3:1865147-1865166 | None:intergenic | 30.0% |
| ! | ACATTGTAATGGAATACACA+TGG | + | chr6_3:1865148-1865167 | None:intergenic | 30.0% |
| TAGCAACTCTATAGACTTAA+TGG | - | chr6_3:1865618-1865637 | Msa0933380:intron | 30.0% | |
| AGCAACTCTATAGACTTAAT+GGG | - | chr6_3:1865619-1865638 | Msa0933380:intron | 30.0% | |
| ! | ATAGACTTAATGGGTGTAAT+TGG | - | chr6_3:1865628-1865647 | Msa0933380:intron | 30.0% |
| ATGAATAAACAACAAGAGAC+GGG | + | chr6_3:1865723-1865742 | None:intergenic | 30.0% | |
| ATTCATAGTTTCACACCATA+TGG | - | chr6_3:1865737-1865756 | Msa0933380:intron | 30.0% | |
| ! | ATTTGGAAGATCTTGTTTGT+TGG | + | chr6_3:1865963-1865982 | None:intergenic | 30.0% |
| GCAATGACTTGATTTATTTC+AGG | - | chr6_3:1866217-1866236 | Msa0933380:intron | 30.0% | |
| CTCAGATCGAAGAAAAAAAG+AGG | - | chr6_3:1862016-1862035 | Msa0933380:three_prime_UTR | 35.0% | |
| ! | GAAGGAGATGAGAATTTTGA+TGG | - | chr6_3:1862427-1862446 | Msa0933380:intron | 35.0% |
| !! | GAGATGAGAATTTTGATGGT+AGG | - | chr6_3:1862431-1862450 | Msa0933380:intron | 35.0% |
| GAATTGAACTAACCAATGGT+AGG | + | chr6_3:1862524-1862543 | None:intergenic | 35.0% | |
| AAGGGAATTGAACTAACCAA+TGG | + | chr6_3:1862528-1862547 | None:intergenic | 35.0% | |
| TGTTTGTGCATGTTAGACAA+AGG | - | chr6_3:1862958-1862977 | Msa0933380:CDS | 35.0% | |
| TTAGACAAAGGCCGTATTAA+AGG | - | chr6_3:1862970-1862989 | Msa0933380:CDS | 35.0% | |
| AATTAATCCCTGCTCTTGTA+TGG | + | chr6_3:1863233-1863252 | None:intergenic | 35.0% | |
| ! | GCAATATGTCTTTTCTCTGT+TGG | + | chr6_3:1863677-1863696 | None:intergenic | 35.0% |
| GATTCAACGAGAGTTTGAAT+AGG | + | chr6_3:1863765-1863784 | None:intergenic | 35.0% | |
| TCCGTAGATCAATGATCTTT+AGG | - | chr6_3:1864044-1864063 | Msa0933380:intron | 35.0% | |
| ! | CCCCAACACAATCTTTAAAA+TGG | + | chr6_3:1864119-1864138 | None:intergenic | 35.0% |
| AAATGGCCGTTTATACAACT+TGG | - | chr6_3:1864192-1864211 | Msa0933380:intron | 35.0% | |
| TGATACTTGTGCAATCATTG+CGG | + | chr6_3:1864384-1864403 | None:intergenic | 35.0% | |
| !!! | GTGTTTTTTGTTTGCGTTTC+GGG | - | chr6_3:1864423-1864442 | Msa0933380:intron | 35.0% |
| AGGATTTAATGTTGAAACCG+TGG | - | chr6_3:1864625-1864644 | Msa0933380:intron | 35.0% | |
| GACAGTGTGAAGTATAAAAG+AGG | - | chr6_3:1864884-1864903 | Msa0933380:intron | 35.0% | |
| GTGTGAAGTATAAAAGAGGT+AGG | - | chr6_3:1864888-1864907 | Msa0933380:intron | 35.0% | |
| AAAAGAGGTAGGTAAAAAGG+GGG | - | chr6_3:1864899-1864918 | Msa0933380:intron | 35.0% | |
| !! | GTACATAAGACTTGCTGAAA+AGG | + | chr6_3:1865094-1865113 | None:intergenic | 35.0% |
| TTATGTACTGTGTATGACTG+TGG | - | chr6_3:1865106-1865125 | Msa0933380:intron | 35.0% | |
| CATGTAAAAGTGAACTACGA+AGG | + | chr6_3:1865414-1865433 | None:intergenic | 35.0% | |
| !!! | ATGCTTGACAACACCTTTTT+TGG | - | chr6_3:1865504-1865523 | Msa0933380:intron | 35.0% |
| !!! | TGCTTGACAACACCTTTTTT+GGG | - | chr6_3:1865505-1865524 | Msa0933380:intron | 35.0% |
| CTGATTATATCCCCCAAAAA+AGG | + | chr6_3:1865520-1865539 | None:intergenic | 35.0% | |
| AGTCTATAGAGTTGCTATCA+AGG | + | chr6_3:1865615-1865634 | None:intergenic | 35.0% | |
| ACAAAACTGTGCAAACCATA+TGG | + | chr6_3:1865755-1865774 | None:intergenic | 35.0% | |
| AACAAACATCAGCAGAGAAA+AGG | + | chr6_3:1865778-1865797 | None:intergenic | 35.0% | |
| ATAATGTTGGTATGTGAACC+TGG | - | chr6_3:1865885-1865904 | Msa0933380:intron | 35.0% | |
| GCAGAAATAACTGACAAACT+TGG | - | chr6_3:1865995-1866014 | Msa0933380:intron | 35.0% | |
| ! | GAAGATCTGATCTTTTGCTT+TGG | - | chr6_3:1866049-1866068 | Msa0933380:intron | 35.0% |
| TTCTAACAACATTGCAAGCA+AGG | - | chr6_3:1866299-1866318 | Msa0933380:intron | 35.0% | |
| GGTCATTACAAATTACCAAG+TGG | + | chr6_3:1866416-1866435 | None:intergenic | 35.0% | |
| ATTCCAGAAAAACAAGAGGA+TGG | + | chr6_3:1866442-1866461 | None:intergenic | 35.0% | |
| ! | TATCGGTTGAATAATTCTGC+AGG | - | chr6_3:1866886-1866905 | Msa0933380:intron | 35.0% |
| ! | AATTCTGCAGGTTCTGTTTT+TGG | - | chr6_3:1866898-1866917 | Msa0933380:intron | 35.0% |
| CGATTTGTGTAGGTGAAGAT+GGG | - | chr6_3:1862365-1862384 | Msa0933380:intron | 40.0% | |
| GATTTGTGTAGGTGAAGATG+GGG | - | chr6_3:1862366-1862385 | Msa0933380:intron | 40.0% | |
| GAGATTCATTGATCCAATGG+TGG | + | chr6_3:1862858-1862877 | None:intergenic | 40.0% | |
| GGTGAGATTCATTGATCCAA+TGG | + | chr6_3:1862861-1862880 | None:intergenic | 40.0% | |
| AAGTTTGCCATACAAGAGCA+GGG | - | chr6_3:1863223-1863242 | Msa0933380:intron | 40.0% | |
| ! | TCAACTGGGTCTTGTGTTTA+TGG | - | chr6_3:1863379-1863398 | Msa0933380:intron | 40.0% |
| ! | CAACTGGGTCTTGTGTTTAT+GGG | - | chr6_3:1863380-1863399 | Msa0933380:intron | 40.0% |
| CAGATATGGTTGGACTGTAA+TGG | + | chr6_3:1863699-1863718 | None:intergenic | 40.0% | |
| TCCAACCATATCTGTTACAG+AGG | - | chr6_3:1863705-1863724 | Msa0933380:intron | 40.0% | |
| ACCTCTGTAACAGATATGGT+TGG | + | chr6_3:1863709-1863728 | None:intergenic | 40.0% | |
| AGAGGTGAGCCATTATATCA+CGG | - | chr6_3:1863723-1863742 | Msa0933380:intron | 40.0% | |
| GAATAGGAAAAGAAGATGGC+CGG | + | chr6_3:1863749-1863768 | None:intergenic | 40.0% | |
| TTTACTGCCAACTTACGTGT+CGG | - | chr6_3:1863805-1863824 | Msa0933380:intron | 40.0% | |
| ! | ATTTTAGACACCAGCTGAAC+TGG | - | chr6_3:1863935-1863954 | Msa0933380:intron | 40.0% |
| ! | TTTTAGACACCAGCTGAACT+GGG | - | chr6_3:1863936-1863955 | Msa0933380:intron | 40.0% |
| TGAACTGGGTATCTTGTACA+TGG | - | chr6_3:1863950-1863969 | Msa0933380:intron | 40.0% | |
| ! | ATCCTTGAACATGTGTTGCT+AGG | - | chr6_3:1863990-1864009 | Msa0933380:intron | 40.0% |
| GTGAACTTAGGAATGTCAGT+TGG | - | chr6_3:1864326-1864345 | Msa0933380:intron | 40.0% | |
| TCACATAACACACAACATGC+AGG | + | chr6_3:1864845-1864864 | None:intergenic | 40.0% | |
| ! | TCGCCACATCGTTTCATTTT+TGG | - | chr6_3:1865020-1865039 | Msa0933380:intron | 40.0% |
| CATTACTTCCAGAACACTCA+GGG | - | chr6_3:1865245-1865264 | Msa0933380:intron | 40.0% | |
| AAATAAGACCCTGAGTGTTC+TGG | + | chr6_3:1865256-1865275 | None:intergenic | 40.0% | |
| !!! | CACTCAGGGTCTTATTTTTG+TGG | - | chr6_3:1865259-1865278 | Msa0933380:intron | 40.0% |
| ATTGCACAGGATGTTGAATG+AGG | - | chr6_3:1865325-1865344 | Msa0933380:intron | 40.0% | |
| !!! | GCTTGACAACACCTTTTTTG+GGG | - | chr6_3:1865506-1865525 | Msa0933380:intron | 40.0% |
| !!! | CTTGACAACACCTTTTTTGG+GGG | - | chr6_3:1865507-1865526 | Msa0933380:intron | 40.0% |
| CTGAAACAAAATGACCATCC+AGG | + | chr6_3:1865906-1865925 | None:intergenic | 40.0% | |
| !! | CTGGATGGTCATTTTGTTTC+AGG | - | chr6_3:1865904-1865923 | Msa0933380:intron | 40.0% |
| TCTGCAGCATTCATTGCATT+TGG | + | chr6_3:1865980-1865999 | None:intergenic | 40.0% | |
| AGATCAGATCTTCATACCAG+TGG | + | chr6_3:1866042-1866061 | None:intergenic | 40.0% | |
| AGAAAAACAAGAGGATGGAG+TGG | + | chr6_3:1866437-1866456 | None:intergenic | 40.0% | |
| !!! | ACTCCATCCTCTTGTTTTTC+TGG | - | chr6_3:1866436-1866455 | Msa0933380:CDS | 40.0% |
| ATCTGATCATTTCCTGAGTC+TGG | - | chr6_3:1866674-1866693 | Msa0933380:intron | 40.0% | |
| TGGATCTCAGCGATTTGTGT+AGG | - | chr6_3:1862355-1862374 | Msa0933380:intron | 45.0% | |
| GCGATTTGTGTAGGTGAAGA+TGG | - | chr6_3:1862364-1862383 | Msa0933380:intron | 45.0% | |
| CAGTAGGTTGTTTGCGAAGA+AGG | - | chr6_3:1862409-1862428 | Msa0933380:intron | 45.0% | |
| ! | TTTGATGGTAGGTCTCGATG+CGG | - | chr6_3:1862442-1862461 | Msa0933380:intron | 45.0% |
| GTTACTACCATCCCTACCAT+TGG | - | chr6_3:1862509-1862528 | Msa0933380:intron | 45.0% | |
| GAACTAACCAATGGTAGGGA+TGG | + | chr6_3:1862519-1862538 | None:intergenic | 45.0% | |
| TGTCGTGTCAATGTCATGTC+AGG | - | chr6_3:1862584-1862603 | Msa0933380:intron | 45.0% | |
| AACAAAGACACCACCTGACA+CGG | + | chr6_3:1862631-1862650 | None:intergenic | 45.0% | |
| CAAGTTTGCCATACAAGAGC+AGG | - | chr6_3:1863222-1863241 | Msa0933380:intron | 45.0% | |
| AGGGGACCCTCTTGAAAAAT+GGG | + | chr6_3:1863465-1863484 | None:intergenic | 45.0% | |
| GCTCACCTCTGTAACAGATA+TGG | + | chr6_3:1863713-1863732 | None:intergenic | 45.0% | |
| TTACTGCCAACTTACGTGTC+GGG | - | chr6_3:1863806-1863825 | Msa0933380:intron | 45.0% | |
| TACAAGATACCCAGTTCAGC+TGG | + | chr6_3:1863948-1863967 | None:intergenic | 45.0% | |
| CTCCTAGCAACACATGTTCA+AGG | + | chr6_3:1863995-1864014 | None:intergenic | 45.0% | |
| !! | GAGAGTGTTGAAGAGAGTGA+TGG | - | chr6_3:1864012-1864031 | Msa0933380:intron | 45.0% |
| ! | AGTGTTGAAGAGAGTGATGG+TGG | - | chr6_3:1864015-1864034 | Msa0933380:intron | 45.0% |
| TTGTGTTGGGGTTTCATGAC+AGG | - | chr6_3:1864128-1864147 | Msa0933380:intron | 45.0% | |
| GCTGATGTTCTTGTACTCCA+CGG | + | chr6_3:1864645-1864664 | None:intergenic | 45.0% | |
| GAGCTAGTAGAGGTCATGAA+TGG | - | chr6_3:1864749-1864768 | Msa0933380:intron | 45.0% | |
| ! | GACTGTGGTGTTTTGCTTAC+TGG | - | chr6_3:1865121-1865140 | Msa0933380:intron | 45.0% |
| GGAAGTAATGCCTCCACAAT+GGG | + | chr6_3:1865235-1865254 | None:intergenic | 45.0% | |
| TGGAAGTAATGCCTCCACAA+TGG | + | chr6_3:1865236-1865255 | None:intergenic | 45.0% | |
| GCATTACTTCCAGAACACTC+AGG | - | chr6_3:1865244-1865263 | Msa0933380:intron | 45.0% | |
| TGTTGGTATGTGAACCTGGA+TGG | - | chr6_3:1865889-1865908 | Msa0933380:intron | 45.0% | |
| GTTTGCACATGCATGTCTCT+AGG | + | chr6_3:1866184-1866203 | None:intergenic | 45.0% | |
| ! | ACTTGTGCAACTTCTGGAGA+GGG | - | chr6_3:1866252-1866271 | Msa0933380:intron | 45.0% |
| CTGCTGTATCATTGTCCACT+TGG | - | chr6_3:1866398-1866417 | Msa0933380:intron | 45.0% | |
| TGATCATTTCCTGAGTCTGG+TGG | - | chr6_3:1866677-1866696 | Msa0933380:intron | 45.0% | |
| AGTCTGGTGGTTCTTGAAGA+AGG | - | chr6_3:1866690-1866709 | Msa0933380:intron | 45.0% | |
| ! | TTCTCCTCGTCAGTGTTACT+TGG | - | chr6_3:1866765-1866784 | Msa0933380:intron | 45.0% |
| !! | TCTCCTCGTCAGTGTTACTT+GGG | - | chr6_3:1866766-1866785 | Msa0933380:intron | 45.0% |
| AAACCCAAGTAACACTGACG+AGG | + | chr6_3:1866772-1866791 | None:intergenic | 45.0% | |
| ! | GGAACTCCTGCAATCTGTTT+TGG | - | chr6_3:1866832-1866851 | Msa0933380:intron | 45.0% |
| !!! | AAAATATTATATTTTGTTTT+CGG | - | chr6_3:1865450-1865469 | Msa0933380:intron | 5.0% |
| CGTTCACGAAGCTGTTCAGT+AGG | - | chr6_3:1862393-1862412 | Msa0933380:intron | 50.0% | |
| TCATGTCAAGTGTCCGTGTC+AGG | - | chr6_3:1862615-1862634 | Msa0933380:intron | 50.0% | |
| ! | CTGGGTCTTGTGTTTATGGG+CGG | - | chr6_3:1863383-1863402 | Msa0933380:intron | 50.0% |
| CAGGGGACCCTCTTGAAAAA+TGG | + | chr6_3:1863466-1863485 | None:intergenic | 50.0% | |
| GTGAGCCATTATATCACGGC+CGG | - | chr6_3:1863727-1863746 | Msa0933380:intron | 50.0% | |
| CAAGTTCCCGACACGTAAGT+TGG | + | chr6_3:1863815-1863834 | None:intergenic | 50.0% | |
| AGAACATCAGCTTCACCGTG+TGG | - | chr6_3:1864654-1864673 | Msa0933380:intron | 50.0% | |
| GAACATCAGCTTCACCGTGT+GGG | - | chr6_3:1864655-1864674 | Msa0933380:intron | 50.0% | |
| TGGTGACAGAGAGCTAGTAG+AGG | - | chr6_3:1864739-1864758 | Msa0933380:intron | 50.0% | |
| AGGTAGGTAAAAAGGGGGAG+AGG | - | chr6_3:1864904-1864923 | Msa0933380:intron | 50.0% | |
| ACAATGGGCGAATCTGCAGA+TGG | + | chr6_3:1865220-1865239 | None:intergenic | 50.0% | |
| ATCTGCAGATTCGCCCATTG+TGG | - | chr6_3:1865219-1865238 | Msa0933380:intron | 50.0% | |
| TAGCAACGATAGAGACCGAG+TGG | - | chr6_3:1865286-1865305 | Msa0933380:intron | 50.0% | |
| AGGCAAGGGATGAATTGCAC+AGG | - | chr6_3:1865312-1865331 | Msa0933380:intron | 50.0% | |
| GATCTTCATACCAGTGGCGT+TGG | + | chr6_3:1866036-1866055 | None:intergenic | 50.0% | |
| ! | CAGAGCACTTGTGCAACTTC+TGG | - | chr6_3:1866246-1866265 | Msa0933380:intron | 50.0% |
| ! | CACTTGTGCAACTTCTGGAG+AGG | - | chr6_3:1866251-1866270 | Msa0933380:intron | 50.0% |
| ! | TTCTGGAGAGGGTCTTTACG+AGG | - | chr6_3:1866263-1866282 | Msa0933380:intron | 50.0% |
| TCTGGAGAGGGTCTTTACGA+GGG | - | chr6_3:1866264-1866283 | Msa0933380:intron | 50.0% | |
| AGAGGGTCTTTACGAGGGTT+TGG | - | chr6_3:1866269-1866288 | Msa0933380:intron | 50.0% | |
| GTCTTTACGAGGGTTTGGAC+TGG | - | chr6_3:1866274-1866293 | Msa0933380:intron | 50.0% | |
| CTTCAAGAACCACCAGACTC+AGG | + | chr6_3:1866689-1866708 | None:intergenic | 50.0% | |
| GGCACACCAAAACAGATTGC+AGG | + | chr6_3:1866841-1866860 | None:intergenic | 50.0% | |
| TGTCAAGTGTCCGTGTCAGG+TGG | - | chr6_3:1862618-1862637 | Msa0933380:intron | 55.0% | |
| CTTGTGTTTATGGGCGGCGA+AGG | - | chr6_3:1863389-1863408 | Msa0933380:intron | 55.0% | |
| CAAGAGGGTCCCCTGCATAA+TGG | - | chr6_3:1863471-1863490 | Msa0933380:intron | 55.0% | |
| GATGGCCGGCCGTGATATAA+TGG | + | chr6_3:1863735-1863754 | None:intergenic | 55.0% | |
| AGCTTCACCGTGTGGGATGT+CGG | - | chr6_3:1864662-1864681 | Msa0933380:intron | 55.0% | |
| AAAAGGGGGAGAGGAGTGAG+TGG | - | chr6_3:1864913-1864932 | Msa0933380:intron | 55.0% | |
| AAAGGGGGAGAGGAGTGAGT+GGG | - | chr6_3:1864914-1864933 | Msa0933380:intron | 55.0% | |
| TGCAGATTCGCCCATTGTGG+AGG | - | chr6_3:1865222-1865241 | Msa0933380:intron | 55.0% | |
| CGATAGAGACCGAGTGGTTG+AGG | - | chr6_3:1865292-1865311 | Msa0933380:intron | 55.0% | |
| AGACCGAGTGGTTGAGGCAA+GGG | - | chr6_3:1865298-1865317 | Msa0933380:intron | 55.0% | |
| CATCCCTTGCCTCAACCACT+CGG | + | chr6_3:1865304-1865323 | None:intergenic | 55.0% | |
| ! | CTTCATACCAGTGGCGTTGG+CGG | + | chr6_3:1866033-1866052 | None:intergenic | 55.0% |
| ATGGTAGGTCTCGATGCGGC+TGG | - | chr6_3:1862446-1862465 | Msa0933380:intron | 60.0% | |
| GCTTCACCGTGTGGGATGTC+GGG | - | chr6_3:1864663-1864682 | Msa0933380:intron | 60.0% | |
| CTTCACCGTGTGGGATGTCG+GGG | - | chr6_3:1864664-1864683 | Msa0933380:intron | 60.0% | |
| TTCACCGTGTGGGATGTCGG+GGG | - | chr6_3:1864665-1864684 | Msa0933380:intron | 60.0% | |
| GAGACCGAGTGGTTGAGGCA+AGG | - | chr6_3:1865297-1865316 | Msa0933380:intron | 60.0% | |
| ATTCTCTCCGCCAACGCCAC+TGG | - | chr6_3:1866023-1866042 | Msa0933380:intron | 60.0% | |
| CTGACCCCCGACATCCCACA+CGG | + | chr6_3:1864672-1864691 | None:intergenic | 65.0% | |
| GGATGTCGGGGGTCAGGACA+AGG | - | chr6_3:1864676-1864695 | Msa0933380:intron | 65.0% | |
| CGTGTGGGATGTCGGGGGTC+AGG | - | chr6_3:1864670-1864689 | Msa0933380:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 1861880 | 1867068 | 1861880 | ID=Msa0933380;Name=Msa0933380 |
| chr6_3 | mRNA | 1861880 | 1867068 | 1861880 | ID=Msa0933380-mRNA-1;Parent=Msa0933380;Name=Msa0933380-mRNA-1;_AED=0.04;_eAED=0.04;_QI=176|1|1|1|0.66|0.57|7|422|181 |
| chr6_3 | exon | 1861880 | 1862307 | 1861880 | ID=Msa0933380-mRNA-1:exon:724;Parent=Msa0933380-mRNA-1 |
| chr6_3 | exon | 1862628 | 1862709 | 1862628 | ID=Msa0933380-mRNA-1:exon:723;Parent=Msa0933380-mRNA-1 |
| chr6_3 | exon | 1862904 | 1863022 | 1862904 | ID=Msa0933380-mRNA-1:exon:722;Parent=Msa0933380-mRNA-1 |
| chr6_3 | exon | 1863602 | 1863721 | 1863602 | ID=Msa0933380-mRNA-1:exon:721;Parent=Msa0933380-mRNA-1 |
| chr6_3 | exon | 1864251 | 1864321 | 1864251 | ID=Msa0933380-mRNA-1:exon:720;Parent=Msa0933380-mRNA-1 |
| chr6_3 | exon | 1866418 | 1866583 | 1866418 | ID=Msa0933380-mRNA-1:exon:719;Parent=Msa0933380-mRNA-1 |
| chr6_3 | exon | 1866911 | 1867068 | 1866911 | ID=Msa0933380-mRNA-1:exon:718;Parent=Msa0933380-mRNA-1 |
| chr6_3 | five_prime_UTR | 1866911 | 1867068 | 1866911 | ID=Msa0933380-mRNA-1:five_prime_utr;Parent=Msa0933380-mRNA-1 |
| chr6_3 | five_prime_UTR | 1866566 | 1866583 | 1866566 | ID=Msa0933380-mRNA-1:five_prime_utr;Parent=Msa0933380-mRNA-1 |
| chr6_3 | CDS | 1866418 | 1866565 | 1866418 | ID=Msa0933380-mRNA-1:cds;Parent=Msa0933380-mRNA-1 |
| chr6_3 | CDS | 1864251 | 1864321 | 1864251 | ID=Msa0933380-mRNA-1:cds;Parent=Msa0933380-mRNA-1 |
| chr6_3 | CDS | 1863602 | 1863721 | 1863602 | ID=Msa0933380-mRNA-1:cds;Parent=Msa0933380-mRNA-1 |
| chr6_3 | CDS | 1862904 | 1863022 | 1862904 | ID=Msa0933380-mRNA-1:cds;Parent=Msa0933380-mRNA-1 |
| chr6_3 | CDS | 1862628 | 1862709 | 1862628 | ID=Msa0933380-mRNA-1:cds;Parent=Msa0933380-mRNA-1 |
| chr6_3 | CDS | 1862302 | 1862307 | 1862302 | ID=Msa0933380-mRNA-1:cds;Parent=Msa0933380-mRNA-1 |
| chr6_3 | three_prime_UTR | 1861880 | 1862301 | 1861880 | ID=Msa0933380-mRNA-1:three_prime_utr;Parent=Msa0933380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
