AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0209350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0209350 MtrunA17_Chr2g0306791 99.713 348 1 0 1 348 1 348 0.0 718
Msa0209350 MtrunA17_Chr7g0250671 92.442 172 12 1 167 337 1 172 4.18e-105 306
Msa0209350 MtrunA17_Chr2g0322171 30.841 321 190 8 9 301 3 319 2.82e-38 139
Msa0209350 MtrunA17_Chr1g0185501 25.685 292 203 9 15 297 26 312 2.47e-18 84.3
Msa0209350 MtrunA17_Chr8g0383711 26.087 276 193 8 30 299 29 299 1.23e-16 79.3
Msa0209350 MtrunA17_Chr4g0067151 23.567 314 213 10 4 297 15 321 5.85e-15 74.7
Msa0209350 MtrunA17_Chr7g0253861 26.000 300 160 9 10 296 92 342 6.49e-14 72.0
Msa0209350 MtrunA17_Chr6g0448921 28.042 189 130 6 112 297 27 212 1.48e-13 72.0
Msa0209350 MtrunA17_Chr3g0095501 23.711 291 201 9 21 297 272 555 2.32e-13 71.2
Msa0209350 MtrunA17_Chr3g0144511 25.843 267 174 8 56 299 60 325 9.95e-13 68.6
Msa0209350 MtrunA17_Chr5g0405851 28.571 203 138 5 14 213 251 449 1.72e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0209350 AT3G15610.1 79.710 345 62 1 1 345 1 337 0.0 567
Msa0209350 AT1G52730.1 80.000 345 63 1 1 345 1 339 0.0 564
Msa0209350 AT1G52730.2 80.000 345 63 1 1 345 1 339 0.0 564
Msa0209350 AT1G15470.1 76.807 332 71 1 9 340 4 329 0.0 543
Msa0209350 AT1G52730.3 86.364 264 36 0 1 264 1 264 2.04e-168 470
Msa0209350 AT1G15470.2 83.137 255 43 0 9 263 4 258 1.16e-162 456
Msa0209350 AT2G46290.1 29.448 326 180 8 9 296 30 343 2.35e-39 143
Msa0209350 AT2G46280.2 30.189 318 188 8 9 296 3 316 2.76e-34 129
Msa0209350 AT2G46280.1 30.189 318 188 8 9 296 3 316 2.76e-34 129
Msa0209350 AT2G46280.3 30.488 246 150 7 9 237 3 244 7.01e-22 93.6
Msa0209350 AT3G49660.1 26.441 295 200 8 15 297 23 312 5.08e-21 92.4
Msa0209350 AT4G02730.1 30.078 256 161 12 54 297 36 285 6.15e-17 81.3
Msa0209350 AT4G02730.1 26.165 279 194 10 30 298 54 330 2.08e-15 76.6
Msa0209350 AT5G08560.1 24.765 319 218 11 21 322 276 589 1.91e-14 74.7
Msa0209350 AT5G08560.2 24.765 319 218 11 21 322 276 589 1.91e-14 74.7
Msa0209350 AT5G08560.3 24.765 319 218 11 21 322 276 589 1.91e-14 74.7
Msa0209350 AT5G64730.1 22.993 274 202 7 30 298 29 298 1.38e-13 70.9
Msa0209350 AT2G43770.1 24.503 302 205 12 10 296 47 340 2.67e-13 70.5
Msa0209350 AT2G01330.1 23.167 341 197 12 15 297 187 520 1.74e-12 68.9
Msa0209350 AT1G71840.1 26.718 262 174 11 49 297 58 314 4.39e-12 67.4
Msa0209350 AT3G18130.1 24.068 295 185 9 14 300 61 324 7.09e-12 66.2
Msa0209350 AT1G48630.1 24.407 295 184 9 14 300 61 324 2.75e-11 64.3
Msa0209350 AT5G23430.1 26.984 189 132 6 112 297 27 212 8.21e-11 63.9
Msa0209350 AT5G23430.3 26.984 189 132 6 112 297 27 212 8.66e-11 63.9
Msa0209350 AT5G23430.2 26.984 189 132 6 112 297 27 212 8.66e-11 63.9

Find 153 sgRNAs with CRISPR-Local

Find 498 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAAAGCTCTGGAAATTT+TGG 0.049365 2_1:-46987342 None:intergenic
AGTGCTGTTGTTGTTCCTTT+AGG 0.148846 2_1:+46987455 Msa0209350:five_prime_UTR
GTGCTGTTGTTGTTCCTTTA+GGG 0.200212 2_1:+46987456 Msa0209350:five_prime_UTR
CTCTTCCTTTCCTTTGGACT+TGG 0.240542 2_1:-46993356 None:intergenic
GTAAAACAATGGCAAGAAAA+AGG 0.249836 2_1:-46993412 None:intergenic
ATGGTTCTACTGTCAAGTTT+TGG 0.261085 2_1:+46992365 Msa0209350:CDS
CCCCGCCTCTTCCTTTCCTT+TGG 0.282864 2_1:-46993362 None:intergenic
GTTCAAATATCATGCTAAAA+TGG 0.284531 2_1:-46993434 None:intergenic
ATTGAGTTCATGTACTGATA+TGG 0.286538 2_1:+46992083 Msa0209350:CDS
GGGGATTTATCCACTTCTTT+AGG 0.292998 2_1:-46992015 None:intergenic
CTCCTCTTACGCTGTCGTTC+TGG 0.293768 2_1:-46987087 None:intergenic
TTTCCAGAGCTTTGAGGGTT+AGG 0.323955 2_1:+46987348 Msa0209350:five_prime_UTR
GGTTTGTGTGCAGCAAAGTT+TGG 0.345909 2_1:+46991240 Msa0209350:intron
AACAAACTTGTTACCAAACT+TGG 0.348142 2_1:-46992542 None:intergenic
ATTAGAACGATAAGATAAAA+TGG 0.353909 2_1:-46987240 None:intergenic
TCAGGGAGTTTGTGGGATAC+TGG 0.354569 2_1:+46993578 Msa0209350:three_prime_UTR
GAGAGGAAGGGCCAGGGCGC+AGG 0.355400 2_1:-46987177 None:intergenic
CACTGTGTCCGGTTCTCTCC+TGG 0.356259 2_1:+46993157 Msa0209350:CDS
AAAGTTTGGGATGCATTAAC+AGG 0.357474 2_1:+46991254 Msa0209350:CDS
TGCTGTTTGGAGTTGTTGTT+TGG 0.358064 2_1:+46987932 Msa0209350:CDS
GAGCTGGGAGAGGAAGGGCC+AGG 0.366606 2_1:-46987184 None:intergenic
AAGAAACCATCAGGAGTAAC+AGG 0.368685 2_1:-46987611 None:intergenic
CAAAATTTCCAGAGCTTTGA+GGG 0.370100 2_1:+46987343 Msa0209350:five_prime_UTR
TAGCATGATATTTGAACCTT+GGG 0.370757 2_1:+46993440 Msa0209350:three_prime_UTR
ACAAGAAATGAAATGATTGA+TGG 0.376047 2_1:-46987428 None:intergenic
TTTGGTAACAAGTTTGTTGC+TGG 0.381118 2_1:+46992547 Msa0209350:CDS
GCCGATTCAAATCATAAATT+CGG 0.388321 2_1:-46991981 None:intergenic
GTTTGTGTGCAGCAAAGTTT+GGG 0.396138 2_1:+46991241 Msa0209350:intron
GCTTCGTTAGAGCCCAAGTT+TGG 0.408433 2_1:+46992529 Msa0209350:CDS
AAGGGCATAAAGGTGCTGTT+TGG 0.408519 2_1:+46987919 Msa0209350:CDS
GGAACATTTGAAGGGCATAA+AGG 0.410447 2_1:+46987909 Msa0209350:CDS
AGGATGGAACCATCAGAATA+TGG 0.410704 2_1:+46993206 Msa0209350:CDS
TACAGTCCTGTTACTCCTGA+TGG 0.412838 2_1:+46987605 Msa0209350:CDS
ATGAATTGACGAGCTGGTTA+AGG 0.413167 2_1:+46993527 Msa0209350:three_prime_UTR
AAGGGCCAGGGCGCAGGGAT+TGG 0.419389 2_1:-46987171 None:intergenic
CCAAAATTTCCAGAGCTTTG+AGG 0.419724 2_1:+46987342 Msa0209350:five_prime_UTR
TCCGAATTTATGATTTGAAT+CGG 0.420073 2_1:+46991980 Msa0209350:CDS
ATACTAATCATGTATATTAG+AGG 0.421571 2_1:-46993464 None:intergenic
GATTGGATTGGAACATTTGA+AGG 0.427455 2_1:+46987900 Msa0209350:CDS
TTCCATACGGGCGATGAGAT+TGG 0.430232 2_1:+46992601 Msa0209350:CDS
GTCTCTCCATTCCTCAGCAT+GGG 0.432506 2_1:-46987873 None:intergenic
GCGACTTGGTGTCAAGTGTC+TGG 0.437902 2_1:-46992291 None:intergenic
GAGGTTTCGCGCAGGATTGA+GGG 0.446305 2_1:+46993313 Msa0209350:CDS
GACTAGTGCTGAAGTGAGTC+AGG 0.452988 2_1:+46992318 Msa0209350:CDS
TATTCTGATGGTTCCATCCT+CGG 0.456186 2_1:-46993203 None:intergenic
TTTACTCAGATTCATTATGT+TGG 0.466142 2_1:-46993652 None:intergenic
GTATAAGAGAGCAGGTCATA+AGG 0.467876 2_1:+46987144 Msa0209350:five_prime_UTR
TTAGCATGATATTTGAACCT+TGG 0.468326 2_1:+46993439 Msa0209350:three_prime_UTR
GCAACACTCCTGACTGAACC+AGG 0.469039 2_1:-46992036 None:intergenic
ACTTCTTTAGGAGGTGCATC+AGG 0.470919 2_1:-46992003 None:intergenic
GAAGGCAAATGCAGAGGAGG+AGG 0.475882 2_1:+46993294 Msa0209350:CDS
GGAATGGAGAGACTGGAGAT+TGG 0.482165 2_1:+46987883 Msa0209350:CDS
AGAGGAAGGGCCAGGGCGCA+GGG 0.482324 2_1:-46987176 None:intergenic
AACACAGAGCTGGGAGAGGA+AGG 0.483612 2_1:-46987190 None:intergenic
GGAGGAGAATCGTATGCATC+AGG 0.485943 2_1:+46993178 Msa0209350:CDS
GGAGGTTTCGCGCAGGATTG+AGG 0.486264 2_1:+46993312 Msa0209350:CDS
CTAATAAGAAAGAAACCATC+AGG 0.486855 2_1:-46987620 None:intergenic
TTGAGTTCATGTACTGATAT+GGG 0.489256 2_1:+46992084 Msa0209350:CDS
TTTAATTTCAGGGAGTTTGT+GGG 0.489273 2_1:+46993571 Msa0209350:three_prime_UTR
TTGGTAACAAGTTTGTTGCT+GGG 0.489658 2_1:+46992548 Msa0209350:CDS
GATGCATACGATTCTCCTCC+AGG 0.490054 2_1:-46993175 None:intergenic
GTCCAGAACGACAGCGTAAG+AGG 0.491640 2_1:+46987085 Msa0209350:five_prime_UTR
AGCTGGGAGAGGAAGGGCCA+GGG 0.492838 2_1:-46987183 None:intergenic
ATTCTCCTCCAGGAGAGAAC+CGG 0.492972 2_1:-46993165 None:intergenic
AGTCTCTCCATTCCTCAGCA+TGG 0.494245 2_1:-46987874 None:intergenic
ACCAAATGGAACCCTGGAAA+AGG 0.496038 2_1:+46993270 Msa0209350:CDS
ATGCTGAGGAATGGAGAGAC+TGG 0.496322 2_1:+46987876 Msa0209350:CDS
CCTCCTAACCCTCAAAGCTC+TGG 0.501548 2_1:-46987351 None:intergenic
CTCACTTCAGCACTAGTCAT+AGG 0.502533 2_1:-46992313 None:intergenic
TCAGAGGGTTTATCACCAAA+TGG 0.504610 2_1:+46993256 Msa0209350:CDS
TACATGAACTCAATATAGTC+TGG 0.504684 2_1:-46992074 None:intergenic
CTCAGCGAGATATTCTCTGC+AGG 0.504716 2_1:-46993697 None:intergenic
CCCTGTCTGCCATATTCTGA+TGG 0.507125 2_1:-46993215 None:intergenic
TATCTCGCTGAGGGTAGGTT+GGG 0.509080 2_1:+46993708 Msa0209350:three_prime_UTR
ACCATCAGAATATGGCAGAC+AGG 0.510525 2_1:+46993214 Msa0209350:CDS
ATGGTCCTGTACACTGTGTC+CGG 0.512630 2_1:+46993146 Msa0209350:CDS
AGGCTATGGGATGTAAGAAC+TGG 0.513301 2_1:+46992259 Msa0209350:intron
GGGTAGAAGTAACACAGAGC+TGG 0.514465 2_1:-46987200 None:intergenic
TCTGATTCATCATGAGTCAA+TGG 0.518807 2_1:-46993238 None:intergenic
GTTCAGTCAGGAGTGTTGCA+TGG 0.523714 2_1:+46992040 Msa0209350:CDS
GTTGATAATTCACAGGCTAT+GGG 0.524204 2_1:+46992246 Msa0209350:intron
CCAGAGCTTTGAGGGTTAGG+AGG 0.524290 2_1:+46987351 Msa0209350:five_prime_UTR
AATGAAATGATTGATGGAAA+CGG 0.526606 2_1:-46987422 None:intergenic
GATTTATCCACTTCTTTAGG+AGG 0.527221 2_1:-46992012 None:intergenic
GGAGAGACTGGAGATTGGAT+TGG 0.528885 2_1:+46987888 Msa0209350:CDS
CAAGTCCAAAGGAAAGGAAG+AGG 0.530035 2_1:+46993357 Msa0209350:CDS
GCAAACCAATCCCTGCGCCC+TGG 0.535809 2_1:+46987166 Msa0209350:five_prime_UTR
CGCTATATTACAACTGCTGA+TGG 0.538929 2_1:+46992346 Msa0209350:CDS
ATATCTCGCTGAGGGTAGGT+TGG 0.540588 2_1:+46993707 Msa0209350:three_prime_UTR
ATGATTGATGGAAACGGTAA+CGG 0.543040 2_1:-46987416 None:intergenic
TACCAATCTCATCGCCCGTA+TGG 0.543083 2_1:-46992603 None:intergenic
TCCAAAGGAAAGGAAGAGGC+GGG 0.544199 2_1:+46993361 Msa0209350:CDS
CTGTAAAAGAGATCAACAAC+TGG 0.548288 2_1:-46987587 None:intergenic
GCTAGTCCCATGCTGAGGAA+TGG 0.548658 2_1:+46987867 Msa0209350:CDS
GACTAGTCGGACGGACGAGA+TGG 0.549462 2_1:-46987118 None:intergenic
AAAGAAGTGGATAAATCCCC+TGG 0.551218 2_1:+46992018 Msa0209350:CDS
TACTAATCATGTATATTAGA+GGG 0.553998 2_1:-46993463 None:intergenic
GCATGCAACAAAGGACATCA+TGG 0.555607 2_1:+46993127 Msa0209350:intron
CAAAGGAAAGGAAGAGGCGG+GGG 0.556170 2_1:+46993363 Msa0209350:CDS
CCATCAGAATATGGCAGACA+GGG 0.557804 2_1:+46993215 Msa0209350:CDS
ATAAATCCCCTGGTTCAGTC+AGG 0.558779 2_1:+46992028 Msa0209350:CDS
GAGAACCGGACACAGTGTAC+AGG 0.559046 2_1:-46993151 None:intergenic
GGAGGCCAAGTCCAAAGGAA+AGG 0.561592 2_1:+46993351 Msa0209350:CDS
ACAAACTTGTTACCAAACTT+GGG 0.561688 2_1:-46992541 None:intergenic
GGTAGAAGTAACACAGAGCT+GGG 0.562530 2_1:-46987199 None:intergenic
TAGTCACAGTATAAGAGAGC+AGG 0.563549 2_1:+46987136 Msa0209350:five_prime_UTR
GAGAATATCTCGCTGAGGGT+AGG 0.568177 2_1:+46993703 Msa0209350:three_prime_UTR
GTACTGATATGGGAGGCGTC+AGG 0.570966 2_1:+46992094 Msa0209350:CDS
AGCACTAGTCATAGGCGACT+TGG 0.571425 2_1:-46992305 None:intergenic
ACGGTACCTCTTGTTTGTCA+CGG 0.573426 2_1:+46987554 Msa0209350:CDS
ACACAGAGCTGGGAGAGGAA+GGG 0.576011 2_1:-46987189 None:intergenic
AAGTAACACAGAGCTGGGAG+AGG 0.579612 2_1:-46987194 None:intergenic
TGGTAACAAGTTTGTTGCTG+GGG 0.580435 2_1:+46992549 Msa0209350:CDS
TTGATAGTATGAAACCCTAA+AGG 0.582489 2_1:-46987470 None:intergenic
CATGTATATTAGAGGGCCCA+AGG 0.588640 2_1:-46993456 None:intergenic
TGATGCACCTCCTAAAGAAG+TGG 0.589350 2_1:+46992005 Msa0209350:CDS
CATATAATGAATTGACGAGC+TGG 0.589827 2_1:+46993521 Msa0209350:three_prime_UTR
GGAGAAGGCAAATGCAGAGG+AGG 0.590265 2_1:+46993291 Msa0209350:CDS
GTCCAAAGGAAAGGAAGAGG+CGG 0.595374 2_1:+46993360 Msa0209350:CDS
ATTGGATTGGAACATTTGAA+GGG 0.596088 2_1:+46987901 Msa0209350:CDS
GGTAACAAGTTTGTTGCTGG+GGG 0.598590 2_1:+46992550 Msa0209350:CDS
GAAGCTGATTCCACATTGCA+AGG 0.600142 2_1:-46992511 None:intergenic
GCAGAGGAGGCCAAGTCCAA+AGG 0.602036 2_1:+46993346 Msa0209350:CDS
TGGAACCCTGGAAAAGGAGA+AGG 0.603332 2_1:+46993276 Msa0209350:CDS
GTGATGGCAGCATGCAACAA+AGG 0.603771 2_1:+46993118 Msa0209350:intron
TATGCATCAGGATCCGAGGA+TGG 0.610567 2_1:+46993190 Msa0209350:CDS
TGCAGAGAATATCTCGCTGA+GGG 0.613151 2_1:+46993699 Msa0209350:three_prime_UTR
ATGCTAAAATGGTAAAACAA+TGG 0.614652 2_1:-46993423 None:intergenic
CAACACTCCTGACTGAACCA+GGG 0.615920 2_1:-46992035 None:intergenic
TTTATCACCAAATGGAACCC+TGG 0.617473 2_1:+46993264 Msa0209350:CDS
ATTGACTCATGATGAATCAG+AGG 0.620794 2_1:+46993240 Msa0209350:CDS
TCTCTTATACTGTGACTAGT+CGG 0.625942 2_1:-46987131 None:intergenic
TTGACTCATGATGAATCAGA+GGG 0.630585 2_1:+46993241 Msa0209350:CDS
CCAAAGGAAAGGAAGAGGCG+GGG 0.631518 2_1:+46993362 Msa0209350:CDS
TTTCTTATTAGCGCAAGCAA+AGG 0.633591 2_1:+46987632 Msa0209350:CDS
ATCGTATGCATCAGGATCCG+AGG 0.634906 2_1:+46993186 Msa0209350:CDS
TCAGCGAGATATTCTCTGCA+GGG 0.640286 2_1:-46993696 None:intergenic
AGTGCTGAAGTGAGTCAGGA+TGG 0.642357 2_1:+46992322 Msa0209350:CDS
CAGAGGAGGAGGTTTCGCGC+AGG 0.644543 2_1:+46993305 Msa0209350:CDS
GAGTGACCGTGACAAACAAG+AGG 0.644753 2_1:-46987560 None:intergenic
AACACTCCTGACTGAACCAG+GGG 0.647227 2_1:-46992034 None:intergenic
CTGCAGAGAATATCTCGCTG+AGG 0.663217 2_1:+46993698 Msa0209350:three_prime_UTR
TTATACTGTGACTAGTCGGA+CGG 0.668732 2_1:-46987127 None:intergenic
AAAGGAGAAGGCAAATGCAG+AGG 0.668862 2_1:+46993288 Msa0209350:CDS
CTATGACATGCCTTGCAATG+TGG 0.670893 2_1:+46992501 Msa0209350:CDS
AATCTGAGTAAACAGAAATG+CGG 0.674121 2_1:+46993663 Msa0209350:three_prime_UTR
TGTGTCCGGTTCTCTCCTGG+AGG 0.681279 2_1:+46993160 Msa0209350:CDS
GTTACGAAAAGTAACACAGG+TGG 0.691010 2_1:-46987389 None:intergenic
TTACGAAAAGTAACACAGGT+GGG 0.698511 2_1:-46987388 None:intergenic
TAGATGCTAGTCCCATGCTG+AGG 0.701748 2_1:+46987862 Msa0209350:intron
AGTTCATGTACTGATATGGG+AGG 0.705266 2_1:+46992087 Msa0209350:CDS
GGTGTTACGAAAAGTAACAC+AGG 0.721694 2_1:-46987392 None:intergenic
ATTGATGGAAACGGTAACGG+CGG 0.741225 2_1:-46987413 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCCAAAAAAAAAAAAAA+TGG + chr2_1:46987063-46987082 Msa0209350:five_prime_UTR 10.0%
!! CTAAAAAAAAAAAAAAAAGA+GGG - chr2_1:46987269-46987288 None:intergenic 10.0%
!!! TATAAACTCAATTTTTAAAT+TGG + chr2_1:46988407-46988426 Msa0209350:intron 10.0%
!! ATATATATTCTGTTAAAATT+TGG + chr2_1:46991830-46991849 Msa0209350:intron 10.0%
!! ATAAGAACAAATATTATAAA+CGG - chr2_1:46992806-46992825 None:intergenic 10.0%
!! TGTATATATTAAAAAATAGT+TGG - chr2_1:46992967-46992986 None:intergenic 10.0%
!! GTATATATTGATAAATATTA+CGG + chr2_1:46993084-46993103 Msa0209350:intron 10.0%
!! TGGTTAAAAAAGAAAAAAAT+GGG - chr2_1:46987223-46987242 None:intergenic 15.0%
!! ATGGTTAAAAAAGAAAAAAA+TGG - chr2_1:46987224-46987243 None:intergenic 15.0%
!! CCTAAAAAAAAAAAAAAAAG+AGG - chr2_1:46987270-46987289 None:intergenic 15.0%
!!! CCTCTTTTTTTTTTTTTTTT+AGG + chr2_1:46987267-46987286 Msa0209350:five_prime_UTR 15.0%
!!! ATTTAATTTTGGAATTTTAG+TGG + chr2_1:46987806-46987825 Msa0209350:intron 15.0%
!! AAAGAATAAAATGTTAAATG+GGG - chr2_1:46989344-46989363 None:intergenic 15.0%
!! CAAAGAATAAAATGTTAAAT+GGG - chr2_1:46989345-46989364 None:intergenic 15.0%
!! ACAAAGAATAAAATGTTAAA+TGG - chr2_1:46989346-46989365 None:intergenic 15.0%
!! AAACATTTCTTATAATAACT+GGG + chr2_1:46990521-46990540 Msa0209350:intron 15.0%
!!! TGGTATTTATTTTCTATTTA+CGG - chr2_1:46991449-46991468 None:intergenic 15.0%
!!! TTTATGTTTGTTTTAATTTC+AGG + chr2_1:46993560-46993579 Msa0209350:three_prime_UTR 15.0%
!!! TTATGTTTGTTTTAATTTCA+GGG + chr2_1:46993561-46993580 Msa0209350:three_prime_UTR 15.0%
!!! TGGACCATTTTTTTTTTTTT+TGG - chr2_1:46987070-46987089 None:intergenic 20.0%
!! ATTAGAACGATAAGATAAAA+TGG - chr2_1:46987243-46987262 None:intergenic 20.0%
!! AATGGAAAAGAAAAAAGTTA+CGG + chr2_1:46987535-46987554 Msa0209350:exon 20.0%
!!! TATTTAAATTGGACCTTTTT+GGG - chr2_1:46988332-46988351 None:intergenic 20.0%
!!! CTTCTTTTACGTATTTAAAT+TGG - chr2_1:46988343-46988362 None:intergenic 20.0%
!!! ATTTTTAAATTGGTAAGAGT+TGG + chr2_1:46988417-46988436 Msa0209350:intron 20.0%
!! TAAAATCCTCATATAGTATT+AGG - chr2_1:46988443-46988462 None:intergenic 20.0%
!!! TATCTCAAAATGTTTCATTT+TGG - chr2_1:46988708-46988727 None:intergenic 20.0%
!!! TACTAGTATTATCTTTGTTT+TGG + chr2_1:46989064-46989083 Msa0209350:intron 20.0%
!!! TAATTTTGTAGAACTGAAAA+GGG - chr2_1:46989139-46989158 None:intergenic 20.0%
!!! TTAATTTTGTAGAACTGAAA+AGG - chr2_1:46989140-46989159 None:intergenic 20.0%
!! TTCAGTTCTACAAAATTAAT+TGG + chr2_1:46989141-46989160 Msa0209350:intron 20.0%
!!! CTAAAAAACAGTAGATTTTA+AGG - chr2_1:46989255-46989274 None:intergenic 20.0%
!!! TTACTAATTTTGTTTCCTTT+TGG + chr2_1:46989386-46989405 Msa0209350:intron 20.0%
!! ACAAAGTGATTTAGATTAAA+TGG - chr2_1:46989463-46989482 None:intergenic 20.0%
!! GAAACATTTCTTATAATAAC+TGG + chr2_1:46990520-46990539 Msa0209350:intron 20.0%
!!! AGTCAATTCAATTTTTTCAA+TGG + chr2_1:46990910-46990929 Msa0209350:intron 20.0%
!!! ATATTTGTTGGTATTCATTT+TGG + chr2_1:46991377-46991396 Msa0209350:intron 20.0%
!!! AATTTTGTGTTTTTGTCATT+AGG - chr2_1:46991419-46991438 None:intergenic 20.0%
!!! GGTATTTATTTTCTATTTAC+GGG - chr2_1:46991448-46991467 None:intergenic 20.0%
!! ATTGATGTTTGTATATATCT+GGG + chr2_1:46991912-46991931 Msa0209350:intron 20.0%
!! AATTCCATATAGGTAATAAT+AGG + chr2_1:46992895-46992914 Msa0209350:intron 20.0%
!!! ACTAAACTGATTTTTAAGTT+TGG + chr2_1:46993045-46993064 Msa0209350:intron 20.0%
!! TACTAATCATGTATATTAGA+GGG - chr2_1:46993466-46993485 None:intergenic 20.0%
!! ATACTAATCATGTATATTAG+AGG - chr2_1:46993467-46993486 None:intergenic 20.0%
!!! TTGTAAGTTTTAGTTTGTAT+TGG + chr2_1:46993497-46993516 Msa0209350:three_prime_UTR 20.0%
! AACAAAAACAAGAAGCAAAT+TGG - chr2_1:46987314-46987333 None:intergenic 25.0%
! AATGAAATGATTGATGGAAA+CGG - chr2_1:46987425-46987444 None:intergenic 25.0%
! ACAAGAAATGAAATGATTGA+TGG - chr2_1:46987431-46987450 None:intergenic 25.0%
!! TTGTGAGATTTTACAAGAAA+TGG + chr2_1:46987517-46987536 Msa0209350:exon 25.0%
!! TAATAGATCTGATCAGTTTT+AGG + chr2_1:46987707-46987726 Msa0209350:intron 25.0%
! AATTAAATGTTATCACGTGT+CGG - chr2_1:46987794-46987813 None:intergenic 25.0%
!!! CACGTGATAACATTTAATTT+TGG + chr2_1:46987795-46987814 Msa0209350:intron 25.0%
! TTTGTTAATTCAATGTGCAT+AGG + chr2_1:46988157-46988176 Msa0209350:intron 25.0%
!! AAGACAATAAACATTTTCAC+AGG - chr2_1:46988224-46988243 None:intergenic 25.0%
! TTTATTGTCTTATGCTTTAC+CGG + chr2_1:46988233-46988252 Msa0209350:intron 25.0%
! CACACACATCTAATATAAAT+AGG + chr2_1:46988298-46988317 Msa0209350:intron 25.0%
!! GTATTTAAATTGGACCTTTT+TGG - chr2_1:46988333-46988352 None:intergenic 25.0%
! TAAAAGAAGTTCATAACCAA+TGG + chr2_1:46988354-46988373 Msa0209350:intron 25.0%
! AAACCTATAATGTAATGTGA+TGG - chr2_1:46988656-46988675 None:intergenic 25.0%
! AATTGGAACTTTGATACTTA+TGG - chr2_1:46988796-46988815 None:intergenic 25.0%
!!! GAAGATTTTGGGATTTAAAT+TGG - chr2_1:46988813-46988832 None:intergenic 25.0%
!! ATTGTTAACTCGAAGATTTT+GGG - chr2_1:46988824-46988843 None:intergenic 25.0%
!! AATTGTTAACTCGAAGATTT+TGG - chr2_1:46988825-46988844 None:intergenic 25.0%
! GCATAGTAATACTAGAATAA+GGG - chr2_1:46989037-46989056 None:intergenic 25.0%
! TGCATAGTAATACTAGAATA+AGG - chr2_1:46989038-46989057 None:intergenic 25.0%
!!! AGTATTATCTTTGTTTTGGT+AGG + chr2_1:46989068-46989087 Msa0209350:intron 25.0%
!! AATTTTGTAGAACTGAAAAG+GGG - chr2_1:46989138-46989157 None:intergenic 25.0%
! ACAGAGAATAAAATGTTAAC+TGG - chr2_1:46989283-46989302 None:intergenic 25.0%
! AAATGGGGATTCATATTAAA+TGG - chr2_1:46989329-46989348 None:intergenic 25.0%
! TAAGAGCAGAAAATGTTAAA+TGG - chr2_1:46989434-46989453 None:intergenic 25.0%
! TGAGATTTACAATTCTGATT+GGG - chr2_1:46989849-46989868 None:intergenic 25.0%
! TTACATTATTGACAGAAGAA+AGG + chr2_1:46990214-46990233 Msa0209350:intron 25.0%
! TACATTATTGACAGAAGAAA+GGG + chr2_1:46990215-46990234 Msa0209350:intron 25.0%
! TTAATTGAATGCTGTACTAA+TGG - chr2_1:46990282-46990301 None:intergenic 25.0%
! TTAGTACAGCATTCAATTAA+TGG + chr2_1:46990282-46990301 Msa0209350:intron 25.0%
! ATAAAATGATGATCTTGGTT+AGG + chr2_1:46990322-46990341 Msa0209350:intron 25.0%
! TAAAATGATGATCTTGGTTA+GGG + chr2_1:46990323-46990342 Msa0209350:intron 25.0%
!!! AAGTAGTGAGGTTTTAAAAA+AGG + chr2_1:46990377-46990396 Msa0209350:intron 25.0%
! TTCATGAGTGAATGTAAAAA+AGG + chr2_1:46990658-46990677 Msa0209350:intron 25.0%
! TCATGAGTGAATGTAAAAAA+GGG + chr2_1:46990659-46990678 Msa0209350:intron 25.0%
!! GAAAGCATAATAATCCTAAT+GGG - chr2_1:46990942-46990961 None:intergenic 25.0%
!! TGAAAGCATAATAATCCTAA+TGG - chr2_1:46990943-46990962 None:intergenic 25.0%
! ACAATAATGACTAAGCAATA+TGG - chr2_1:46990994-46991013 None:intergenic 25.0%
! AATTAGCATGACATATTTGT+TGG + chr2_1:46991219-46991238 Msa0209350:intron 25.0%
!!! TTTATTTTCTATTTACGGGA+AGG - chr2_1:46991444-46991463 None:intergenic 25.0%
! ATGAAAATACTATAATCGCT+TGG - chr2_1:46991497-46991516 None:intergenic 25.0%
! CTTGCAGATACAATTTAATA+GGG - chr2_1:46991742-46991761 None:intergenic 25.0%
! CAATCAATTCATATGAACAA+AGG - chr2_1:46991896-46991915 None:intergenic 25.0%
! GATTGATGTTTGTATATATC+TGG + chr2_1:46991911-46991930 Msa0209350:intron 25.0%
! TCCGAATTTATGATTTGAAT+CGG + chr2_1:46991980-46991999 Msa0209350:CDS 25.0%
! ATATACAAAAACGACAACAA+CGG - chr2_1:46992155-46992174 None:intergenic 25.0%
! TTTGATATAAACATGAAGCT+TGG + chr2_1:46992201-46992220 Msa0209350:intron 25.0%
! GTAAGTAACAATAAGTTAGT+TGG + chr2_1:46992399-46992418 Msa0209350:intron 25.0%
! CATAACCTTAAAAAAGAACA+TGG - chr2_1:46992425-46992444 None:intergenic 25.0%
!!! TCATGTTTTTGATTTCCATA+CGG + chr2_1:46992588-46992607 Msa0209350:CDS 25.0%
! AGATCCTATTATTACCTATA+TGG - chr2_1:46992902-46992921 None:intergenic 25.0%
!! TAGGATCTAAAACCAAAATA+AGG + chr2_1:46992914-46992933 Msa0209350:intron 25.0%
!!! ATATGATTTGGTCCTTATTT+TGG - chr2_1:46992929-46992948 None:intergenic 25.0%
! AGAACATAGGAAATATGATT+TGG - chr2_1:46992941-46992960 None:intergenic 25.0%
! AAATCATATTTCCTATGTTC+TGG + chr2_1:46992940-46992959 Msa0209350:intron 25.0%
! TAAAACAATGGCAAGAAAAA+GGG - chr2_1:46993414-46993433 None:intergenic 25.0%
! ATGCTAAAATGGTAAAACAA+TGG - chr2_1:46993426-46993445 None:intergenic 25.0%
! GTTCAAATATCATGCTAAAA+TGG - chr2_1:46993437-46993456 None:intergenic 25.0%
! TTTACTCAGATTCATTATGT+TGG - chr2_1:46993655-46993674 None:intergenic 25.0%
! TTGATAGTATGAAACCCTAA+AGG - chr2_1:46987473-46987492 None:intergenic 30.0%
CTAATAAGAAAGAAACCATC+AGG - chr2_1:46987623-46987642 None:intergenic 30.0%
! ATTGGATTGGAACATTTGAA+GGG + chr2_1:46987901-46987920 Msa0209350:CDS 30.0%
CACTAAACATACTGAAAGAA+AGG - chr2_1:46988025-46988044 None:intergenic 30.0%
!!! ACTCGTAAATTTTTTGCCAT+TGG - chr2_1:46988373-46988392 None:intergenic 30.0%
AAAAAATTTACGAGTCCTTG+TGG + chr2_1:46988378-46988397 Msa0209350:intron 30.0%
AAAAATTTACGAGTCCTTGT+GGG + chr2_1:46988379-46988398 Msa0209350:intron 30.0%
TTACCGTCATAAATGATATG+CGG + chr2_1:46988460-46988479 Msa0209350:intron 30.0%
GATTACTTGATCAATCCAAA+TGG - chr2_1:46988503-46988522 None:intergenic 30.0%
GTTCCATCACATTACATTAT+AGG + chr2_1:46988650-46988669 Msa0209350:intron 30.0%
!! ACATACTTGTTGTCTAAACT+TGG + chr2_1:46988763-46988782 Msa0209350:intron 30.0%
!! CATACTTGTTGTCTAAACTT+GGG + chr2_1:46988764-46988783 Msa0209350:intron 30.0%
!!! GTGTCACTTACACTATTTTT+GGG - chr2_1:46988910-46988929 None:intergenic 30.0%
!!! AGTGTCACTTACACTATTTT+TGG - chr2_1:46988911-46988930 None:intergenic 30.0%
!!! TATTTTTGGAGCAAAAAGAG+CGG - chr2_1:46988972-46988991 None:intergenic 30.0%
ATCTGTCATAAGATCGAAAT+GGG - chr2_1:46989218-46989237 None:intergenic 30.0%
GATTAAATGCTGAATCCAAA+AGG - chr2_1:46989404-46989423 None:intergenic 30.0%
TCAGTAAAGAACAAAGTGAA+GGG - chr2_1:46989528-46989547 None:intergenic 30.0%
TTCAGTAAAGAACAAAGTGA+AGG - chr2_1:46989529-46989548 None:intergenic 30.0%
GTCAATTATGAATACGATCA+AGG - chr2_1:46989678-46989697 None:intergenic 30.0%
AACCTTGTGAACTTATGATT+TGG - chr2_1:46989700-46989719 None:intergenic 30.0%
AAATCATAAGTTCACAAGGT+TGG + chr2_1:46989699-46989718 Msa0209350:intron 30.0%
GTGAGATTTACAATTCTGAT+TGG - chr2_1:46989850-46989869 None:intergenic 30.0%
ATCAGAATTGTAAATCTCAC+CGG + chr2_1:46989850-46989869 Msa0209350:intron 30.0%
! GAAGCATTATAGTGTTCTTT+AGG - chr2_1:46989949-46989968 None:intergenic 30.0%
AAAGAACACTATAATGCTTC+TGG + chr2_1:46989949-46989968 Msa0209350:intron 30.0%
AATACTGAGTTCATGATTGT+AGG - chr2_1:46990021-46990040 None:intergenic 30.0%
TGTGGTATGCAATTATGTTT+GGG - chr2_1:46990124-46990143 None:intergenic 30.0%
GTTGCATAAAATGATGATCT+TGG + chr2_1:46990317-46990336 Msa0209350:intron 30.0%
AAAATTGCATCAAATACACC+CGG - chr2_1:46990466-46990485 None:intergenic 30.0%
! TGCAATTTTCTGCAATATCA+AGG + chr2_1:46990477-46990496 Msa0209350:intron 30.0%
TATAAGAAATGTTTCCACCA+CGG - chr2_1:46990515-46990534 None:intergenic 30.0%
ATACTAGTTGAGAAGTCATT+TGG - chr2_1:46990573-46990592 None:intergenic 30.0%
! TCATGCATTTTACATGTTTC+AGG - chr2_1:46990608-46990627 None:intergenic 30.0%
AGGACTTCAATATTGAAAAG+TGG - chr2_1:46990860-46990879 None:intergenic 30.0%
CAATATTGAAGTCCTAAAAC+AGG + chr2_1:46990865-46990884 Msa0209350:intron 30.0%
! CAGAAATCAATTCCTGTTTT+AGG - chr2_1:46990880-46990899 None:intergenic 30.0%
TTCAATGGTTTAAACCCATT+AGG + chr2_1:46990925-46990944 Msa0209350:intron 30.0%
TAATGACTAAGCAATATGGA+AGG - chr2_1:46990990-46991009 None:intergenic 30.0%
ATATCAGAGTGTGATACTAA+AGG - chr2_1:46991096-46991115 None:intergenic 30.0%
TGCAAATTGTGAAAGAAACA+CGG - chr2_1:46991351-46991370 None:intergenic 30.0%
TTTGCATGACTGATATTTGT+TGG + chr2_1:46991365-46991384 Msa0209350:intron 30.0%
!!! TGGTATTCATTTTGGTTGAT+CGG + chr2_1:46991385-46991404 Msa0209350:intron 30.0%
ATAATCGCTTGGTAAATTCT+AGG - chr2_1:46991486-46991505 None:intergenic 30.0%
TTGGTAGATGAATTCAGTTA+TGG - chr2_1:46991524-46991543 None:intergenic 30.0%
CCATAAATGAATTCAGCTAT+TGG - chr2_1:46991543-46991562 None:intergenic 30.0%
CCAATAGCTGAATTCATTTA+TGG + chr2_1:46991540-46991559 Msa0209350:intron 30.0%
AAATCTTGATTCTTTGAGCA+AGG + chr2_1:46991650-46991669 Msa0209350:intron 30.0%
GCTTGCAGATACAATTTAAT+AGG - chr2_1:46991743-46991762 None:intergenic 30.0%
ATTACAAAACAAGCTTATCC+TGG + chr2_1:46991784-46991803 Msa0209350:intron 30.0%
ATTATCACTTAATCTATGCC+AGG - chr2_1:46991805-46991824 None:intergenic 30.0%
! TAAAGAACAAGGCATTAACA+AGG - chr2_1:46991859-46991878 None:intergenic 30.0%
CAATTCATATGAACAAAGGT+GGG - chr2_1:46991892-46991911 None:intergenic 30.0%
TCAATTCATATGAACAAAGG+TGG - chr2_1:46991893-46991912 None:intergenic 30.0%
! GCCGATTCAAATCATAAATT+CGG - chr2_1:46991984-46992003 None:intergenic 30.0%
TACATGAACTCAATATAGTC+TGG - chr2_1:46992077-46992096 None:intergenic 30.0%
! ATTGAGTTCATGTACTGATA+TGG + chr2_1:46992083-46992102 Msa0209350:CDS 30.0%
! TTGAGTTCATGTACTGATAT+GGG + chr2_1:46992084-46992103 Msa0209350:CDS 30.0%
!! GAATCTTGTTGATAATTCAC+AGG + chr2_1:46992239-46992258 Msa0209350:intron 30.0%
GATGTTGTCAATCATCAAAA+AGG - chr2_1:46992448-46992467 None:intergenic 30.0%
!! ACAAACTTGTTACCAAACTT+GGG - chr2_1:46992544-46992563 None:intergenic 30.0%
!! AACAAACTTGTTACCAAACT+TGG - chr2_1:46992545-46992564 None:intergenic 30.0%
!!! CATGTTTTTGATTTCCATAC+GGG + chr2_1:46992589-46992608 Msa0209350:CDS 30.0%
!!! GCATTTTTTTCGATTTCTCA+AGG - chr2_1:46992758-46992777 None:intergenic 30.0%
!!! AATGCTTCTGATTGTTGTTT+TGG + chr2_1:46992773-46992792 Msa0209350:intron 30.0%
ATTAATCCTTGCAATATCTG+TGG + chr2_1:46992830-46992849 Msa0209350:intron 30.0%
!! TCGCTATATGTTTTGTTCTA+GGG - chr2_1:46992873-46992892 None:intergenic 30.0%
TATAGCGACTAATTCCATAT+AGG + chr2_1:46992885-46992904 Msa0209350:intron 30.0%
TTTAGTTATCAAAAGATGCC+AGG - chr2_1:46993031-46993050 None:intergenic 30.0%
! GTTTGGTTTAATTCATTGTG+TGG + chr2_1:46993062-46993081 Msa0209350:intron 30.0%
AAATATTACGGTGTTCTATC+TGG + chr2_1:46993096-46993115 Msa0209350:intron 30.0%
GTAAAACAATGGCAAGAAAA+AGG - chr2_1:46993415-46993434 None:intergenic 30.0%
TTAGCATGATATTTGAACCT+TGG + chr2_1:46993439-46993458 Msa0209350:three_prime_UTR 30.0%
TAGCATGATATTTGAACCTT+GGG + chr2_1:46993440-46993459 Msa0209350:three_prime_UTR 30.0%
!!! TTTTAATTTCAGGGAGTTTG+TGG + chr2_1:46993570-46993589 Msa0209350:three_prime_UTR 30.0%
! TTTAATTTCAGGGAGTTTGT+GGG + chr2_1:46993571-46993590 Msa0209350:three_prime_UTR 30.0%
AATCTGAGTAAACAGAAATG+CGG + chr2_1:46993663-46993682 Msa0209350:three_prime_UTR 30.0%
TCTCTTATACTGTGACTAGT+CGG - chr2_1:46987134-46987153 None:intergenic 35.0%
!!! CTCAAAGCTCTGGAAATTTT+GGG - chr2_1:46987344-46987363 None:intergenic 35.0%
! CAAAATTTCCAGAGCTTTGA+GGG + chr2_1:46987343-46987362 Msa0209350:five_prime_UTR 35.0%
TTACGAAAAGTAACACAGGT+GGG - chr2_1:46987391-46987410 None:intergenic 35.0%
ATGATTGATGGAAACGGTAA+CGG - chr2_1:46987419-46987438 None:intergenic 35.0%
CTGTAAAAGAGATCAACAAC+TGG - chr2_1:46987590-46987609 None:intergenic 35.0%
TTTCTTATTAGCGCAAGCAA+AGG + chr2_1:46987632-46987651 Msa0209350:CDS 35.0%
! GATTGGATTGGAACATTTGA+AGG + chr2_1:46987900-46987919 Msa0209350:CDS 35.0%
ATAGGAAAGTTAGCCCAAAA+AGG + chr2_1:46988316-46988335 Msa0209350:intron 35.0%
GAGTTTATAAATGACCCACA+AGG - chr2_1:46988396-46988415 None:intergenic 35.0%
! AGTTGGCCTAATACTATATG+AGG + chr2_1:46988434-46988453 Msa0209350:intron 35.0%
! CACTATCTTTTTCCACCATT+TGG + chr2_1:46988485-46988504 Msa0209350:intron 35.0%
TACTTGATCAATCCAAATGG+TGG - chr2_1:46988500-46988519 None:intergenic 35.0%
GACTCTATGATAAGATGCAT+GGG - chr2_1:46988525-46988544 None:intergenic 35.0%
AGACTCTATGATAAGATGCA+TGG - chr2_1:46988526-46988545 None:intergenic 35.0%
TTATCATAGAGTCTCCATAC+TGG + chr2_1:46988532-46988551 Msa0209350:intron 35.0%
! ATGTAATGTGATGGAACAGT+AGG - chr2_1:46988647-46988666 None:intergenic 35.0%
! TTTTGGCGTGCATAATTATC+AGG - chr2_1:46988691-46988710 None:intergenic 35.0%
ATTCTATGTGTGGTCTAGAT+TGG - chr2_1:46988855-46988874 None:intergenic 35.0%
AGAATCCCGATTTAGTGTAA+TGG + chr2_1:46988870-46988889 Msa0209350:intron 35.0%
GAATCCCGATTTAGTGTAAT+GGG + chr2_1:46988871-46988890 Msa0209350:intron 35.0%
AATCCCGATTTAGTGTAATG+GGG + chr2_1:46988872-46988891 Msa0209350:intron 35.0%
!! GGTATTTTCGAGGAAAAAAG+TGG - chr2_1:46989016-46989035 None:intergenic 35.0%
!!! CTAGAATAAGGGTATTTTCG+AGG - chr2_1:46989026-46989045 None:intergenic 35.0%
TTGGTAGGATCTTTCAATCT+TGG + chr2_1:46989083-46989102 Msa0209350:intron 35.0%
TGGATAAGATCATTCGATCT+TGG + chr2_1:46989161-46989180 Msa0209350:intron 35.0%
TCTGTCATAAGATCGAAATG+GGG - chr2_1:46989217-46989236 None:intergenic 35.0%
GATCTGTCATAAGATCGAAA+TGG - chr2_1:46989219-46989238 None:intergenic 35.0%
CAAAAGTCTACACAAACTCA+TGG - chr2_1:46989646-46989665 None:intergenic 35.0%
GACCAAATCATAAGTTCACA+AGG + chr2_1:46989695-46989714 Msa0209350:intron 35.0%
AAACAAAACTGCAGAAACTC+AGG + chr2_1:46989728-46989747 Msa0209350:intron 35.0%
! TTGTAATTTCTGGATGTGTC+CGG - chr2_1:46989872-46989891 None:intergenic 35.0%
ATGTTATGTTACAAGTGGCT+GGG - chr2_1:46989911-46989930 None:intergenic 35.0%
AGCCACTTGTAACATAACAT+GGG + chr2_1:46989911-46989930 Msa0209350:intron 35.0%
AACACTATAATGCTTCTGGA+AGG + chr2_1:46989953-46989972 Msa0209350:intron 35.0%
GTGTGGTATGCAATTATGTT+TGG - chr2_1:46990125-46990144 None:intergenic 35.0%
TAATTTCTCTGTGTCTAGTG+TGG - chr2_1:46990142-46990161 None:intergenic 35.0%
GTACAGCATTCAATTAATGG+TGG + chr2_1:46990285-46990304 Msa0209350:intron 35.0%
ACATCAAAAACCTAGACACT+GGG - chr2_1:46990423-46990442 None:intergenic 35.0%
TGAATATGCACTGTAATTCG+TGG - chr2_1:46990633-46990652 None:intergenic 35.0%
!!! ACACTAGCATTTTTTTGCAG+TGG + chr2_1:46991027-46991046 Msa0209350:intron 35.0%
ATACTAAAGGACTAATGCAG+GGG - chr2_1:46991083-46991102 None:intergenic 35.0%
GATACTAAAGGACTAATGCA+GGG - chr2_1:46991084-46991103 None:intergenic 35.0%
TGATACTAAAGGACTAATGC+AGG - chr2_1:46991085-46991104 None:intergenic 35.0%
! AAAGTTTGGGATGCATTAAC+AGG + chr2_1:46991254-46991273 Msa0209350:CDS 35.0%
GCAAATTGTGAAAGAAACAC+GGG - chr2_1:46991350-46991369 None:intergenic 35.0%
! TTGTACTGTAGTTGTCACTT+TGG + chr2_1:46991602-46991621 Msa0209350:intron 35.0%
! AATGCCTTGTTCTTTATCTG+AGG + chr2_1:46991863-46991882 Msa0209350:intron 35.0%
GTATCCTCAGATAAAGAACA+AGG - chr2_1:46991870-46991889 None:intergenic 35.0%
GATTTATCCACTTCTTTAGG+AGG - chr2_1:46992015-46992034 None:intergenic 35.0%
AACAAGATTCAGTGCAATAG+AGG - chr2_1:46992229-46992248 None:intergenic 35.0%
!! TGTTGATAATTCACAGGCTA+TGG + chr2_1:46992245-46992264 Msa0209350:intron 35.0%
!! GTTGATAATTCACAGGCTAT+GGG + chr2_1:46992246-46992265 Msa0209350:intron 35.0%
!! ATGGTTCTACTGTCAAGTTT+TGG + chr2_1:46992365-46992384 Msa0209350:CDS 35.0%
!! TGGTTCTACTGTCAAGTTTT+GGG + chr2_1:46992366-46992385 Msa0209350:CDS 35.0%
!!! GTTGGCCATGTTCTTTTTTA+AGG + chr2_1:46992417-46992436 Msa0209350:intron 35.0%
AATCCATAGCTGAAAATCAC+AGG - chr2_1:46992472-46992491 None:intergenic 35.0%
! TGTGATTTTCAGCTATGGAT+TGG + chr2_1:46992471-46992490 Msa0209350:intron 35.0%
!! TTTGGTAACAAGTTTGTTGC+TGG + chr2_1:46992547-46992566 Msa0209350:CDS 35.0%
!! TTGGTAACAAGTTTGTTGCT+GGG + chr2_1:46992548-46992567 Msa0209350:CDS 35.0%
! TAACTGACTCATGCTTTGTA+GGG - chr2_1:46992727-46992746 None:intergenic 35.0%
!! GTCGCTATATGTTTTGTTCT+AGG - chr2_1:46992874-46992893 None:intergenic 35.0%
AAATAGTTGGTCCAGAACAT+AGG - chr2_1:46992954-46992973 None:intergenic 35.0%
!!! TTTGTTTTACACTTCTGACC+TGG + chr2_1:46993010-46993029 Msa0209350:intron 35.0%
TCTGATTCATCATGAGTCAA+TGG - chr2_1:46993241-46993260 None:intergenic 35.0%
! ATTGACTCATGATGAATCAG+AGG + chr2_1:46993240-46993259 Msa0209350:CDS 35.0%
TTGACTCATGATGAATCAGA+GGG + chr2_1:46993241-46993260 Msa0209350:CDS 35.0%
CATATAATGAATTGACGAGC+TGG + chr2_1:46993521-46993540 Msa0209350:three_prime_UTR 35.0%
! TTATACTGTGACTAGTCGGA+CGG - chr2_1:46987130-46987149 None:intergenic 40.0%
TAGTCACAGTATAAGAGAGC+AGG + chr2_1:46987136-46987155 Msa0209350:five_prime_UTR 40.0%
GTATAAGAGAGCAGGTCATA+AGG + chr2_1:46987144-46987163 Msa0209350:five_prime_UTR 40.0%
!!! CCTCAAAGCTCTGGAAATTT+TGG - chr2_1:46987345-46987364 None:intergenic 40.0%
CCAAAATTTCCAGAGCTTTG+AGG + chr2_1:46987342-46987361 Msa0209350:five_prime_UTR 40.0%
GTTACGAAAAGTAACACAGG+TGG - chr2_1:46987392-46987411 None:intergenic 40.0%
! GGTGTTACGAAAAGTAACAC+AGG - chr2_1:46987395-46987414 None:intergenic 40.0%
! AGTGCTGTTGTTGTTCCTTT+AGG + chr2_1:46987455-46987474 Msa0209350:five_prime_UTR 40.0%
! GTGCTGTTGTTGTTCCTTTA+GGG + chr2_1:46987456-46987475 Msa0209350:five_prime_UTR 40.0%
AAGAAACCATCAGGAGTAAC+AGG - chr2_1:46987614-46987633 None:intergenic 40.0%
! GGAACATTTGAAGGGCATAA+AGG + chr2_1:46987909-46987928 Msa0209350:CDS 40.0%
! TGCTGTTTGGAGTTGTTGTT+TGG + chr2_1:46987932-46987951 Msa0209350:CDS 40.0%
GCACCGCATATCATTTATGA+CGG - chr2_1:46988466-46988485 None:intergenic 40.0%
CTAAATCGGGATTCTATGTG+TGG - chr2_1:46988865-46988884 None:intergenic 40.0%
CAACCCCATTACACTAAATC+GGG - chr2_1:46988878-46988897 None:intergenic 40.0%
CCAACCCCATTACACTAAAT+CGG - chr2_1:46988879-46988898 None:intergenic 40.0%
! CGATTTAGTGTAATGGGGTT+GGG + chr2_1:46988877-46988896 Msa0209350:intron 40.0%
!!! TTTTTTTTTCTAACCCCCCG+CGG + chr2_1:46988942-46988961 Msa0209350:intron 40.0%
AACAGTCAAAGTCTCGAGAA+GGG - chr2_1:46989497-46989516 None:intergenic 40.0%
TAACAGTCAAAGTCTCGAGA+AGG - chr2_1:46989498-46989517 None:intergenic 40.0%
! ACAGGGTGGTTTGTAATTTC+TGG - chr2_1:46989882-46989901 None:intergenic 40.0%
CATGTTATGTTACAAGTGGC+TGG - chr2_1:46989912-46989931 None:intergenic 40.0%
CAGCCACTTGTAACATAACA+TGG + chr2_1:46989910-46989929 Msa0209350:intron 40.0%
GACCCATGTTATGTTACAAG+TGG - chr2_1:46989916-46989935 None:intergenic 40.0%
CTGAGTTCATGATTGTAGGT+AGG - chr2_1:46990017-46990036 None:intergenic 40.0%
AAGTGAAACTTTGCTGCGAT+TGG - chr2_1:46990256-46990275 None:intergenic 40.0%
AGCATTCAATTAATGGTGGC+AGG + chr2_1:46990289-46990308 Msa0209350:intron 40.0%
GCATTCAATTAATGGTGGCA+GGG + chr2_1:46990290-46990309 Msa0209350:intron 40.0%
ATGATGATCTTGGTTAGGGA+TGG + chr2_1:46990327-46990346 Msa0209350:intron 40.0%
TGATGATCTTGGTTAGGGAT+GGG + chr2_1:46990328-46990347 Msa0209350:intron 40.0%
!! GTGTTGACGAATGTTTTCAG+AGG + chr2_1:46990353-46990372 Msa0209350:intron 40.0%
CATCAAAAACCTAGACACTG+GGG - chr2_1:46990422-46990441 None:intergenic 40.0%
GACATCAAAAACCTAGACAC+TGG - chr2_1:46990424-46990443 None:intergenic 40.0%
TAGTTGAGAAGTCATTTGGC+TGG - chr2_1:46990569-46990588 None:intergenic 40.0%
GAATGTAAAAAAGGGCAACC+CGG + chr2_1:46990667-46990686 Msa0209350:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr2_1:46990733-46990752 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG - chr2_1:46990759-46990778 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG + chr2_1:46990757-46990776 Msa0209350:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG - chr2_1:46990764-46990783 None:intergenic 40.0%
AACAGCCTCTTGTGTAAAAC+AGG - chr2_1:46990765-46990784 None:intergenic 40.0%
GTTTGTGTGCAGCAAAGTTT+GGG + chr2_1:46991241-46991260 Msa0209350:intron 40.0%
TCTAGGCATGCACACTTTAA+TGG - chr2_1:46991469-46991488 None:intergenic 40.0%
GTTTGTATATATCTGGGAGC+AGG + chr2_1:46991918-46991937 Msa0209350:intron 40.0%
GGGGATTTATCCACTTCTTT+AGG - chr2_1:46992018-46992037 None:intergenic 40.0%
AAAGAAGTGGATAAATCCCC+TGG + chr2_1:46992018-46992037 Msa0209350:CDS 40.0%
! AGTTCATGTACTGATATGGG+AGG + chr2_1:46992087-46992106 Msa0209350:CDS 40.0%
GACCATACTATGTTGACAGT+TGG + chr2_1:46992129-46992148 Msa0209350:intron 40.0%
CGCTATATTACAACTGCTGA+TGG + chr2_1:46992346-46992365 Msa0209350:CDS 40.0%
! TCACCTGTGATTTTCAGCTA+TGG + chr2_1:46992466-46992485 Msa0209350:intron 40.0%
!! TGGTAACAAGTTTGTTGCTG+GGG + chr2_1:46992549-46992568 Msa0209350:CDS 40.0%
GTGAACTTCTGTATGCTACA+CGG - chr2_1:46992687-46992706 None:intergenic 40.0%
! AACTGACTCATGCTTTGTAG+GGG - chr2_1:46992726-46992745 None:intergenic 40.0%
! CTAACTGACTCATGCTTTGT+AGG - chr2_1:46992728-46992747 None:intergenic 40.0%
CATGATCCACAGATATTGCA+AGG - chr2_1:46992839-46992858 None:intergenic 40.0%
TATTCTGATGGTTCCATCCT+CGG - chr2_1:46993206-46993225 None:intergenic 40.0%
AGGATGGAACCATCAGAATA+TGG + chr2_1:46993206-46993225 Msa0209350:CDS 40.0%
TCAGAGGGTTTATCACCAAA+TGG + chr2_1:46993256-46993275 Msa0209350:CDS 40.0%
TTTATCACCAAATGGAACCC+TGG + chr2_1:46993264-46993283 Msa0209350:CDS 40.0%
! ATTTGCCTTCTCCTTTTCCA+GGG - chr2_1:46993284-46993303 None:intergenic 40.0%
! TGAGGGTTTTCATATTGCAG+AGG + chr2_1:46993330-46993349 Msa0209350:CDS 40.0%
ATGAATTGACGAGCTGGTTA+AGG + chr2_1:46993527-46993546 Msa0209350:three_prime_UTR 40.0%
GGTAGAAGTAACACAGAGCT+GGG - chr2_1:46987202-46987221 None:intergenic 45.0%
!! TTTCCAGAGCTTTGAGGGTT+AGG + chr2_1:46987348-46987367 Msa0209350:five_prime_UTR 45.0%
! ATTGATGGAAACGGTAACGG+CGG - chr2_1:46987416-46987435 None:intergenic 45.0%
! ACGGTACCTCTTGTTTGTCA+CGG + chr2_1:46987554-46987573 Msa0209350:CDS 45.0%
TACAGTCCTGTTACTCCTGA+TGG + chr2_1:46987605-46987624 Msa0209350:CDS 45.0%
!! AAGGGCATAAAGGTGCTGTT+TGG + chr2_1:46987919-46987938 Msa0209350:CDS 45.0%
GCACGTGTTGGATGTTTATC+CGG - chr2_1:46988255-46988274 None:intergenic 45.0%
ATGAATGCAAGTGCACGTGT+TGG - chr2_1:46988267-46988286 None:intergenic 45.0%
CAAGCACATGATGAGGAAGT+GGG - chr2_1:46988560-46988579 None:intergenic 45.0%
AGCAAAGCAAGCACATGATG+AGG - chr2_1:46988567-46988586 None:intergenic 45.0%
CATGTGCTTGCTTTGCTCAT+TGG + chr2_1:46988570-46988589 Msa0209350:intron 45.0%
! ATGTGATGGAACAGTAGGCT+AGG - chr2_1:46988642-46988661 None:intergenic 45.0%
GGCGTGCATAATTATCAGGT+TGG - chr2_1:46988687-46988706 None:intergenic 45.0%
! CCGATTTAGTGTAATGGGGT+TGG + chr2_1:46988876-46988895 Msa0209350:intron 45.0%
GAAAAAAGTGGACGTGGTTG+GGG - chr2_1:46989004-46989023 None:intergenic 45.0%
GGAAAAAAGTGGACGTGGTT+GGG - chr2_1:46989005-46989024 None:intergenic 45.0%
AGGAAAAAAGTGGACGTGGT+TGG - chr2_1:46989006-46989025 None:intergenic 45.0%
TTCGAGGAAAAAAGTGGACG+TGG - chr2_1:46989010-46989029 None:intergenic 45.0%
TTGGGCACTACATCTCTTCA+TGG - chr2_1:46990106-46990125 None:intergenic 45.0%
CACCTTCCAGAAGCAATGTT+GGG - chr2_1:46990184-46990203 None:intergenic 45.0%
! GTTTTCAGAGGCAAGTAGTG+AGG + chr2_1:46990365-46990384 Msa0209350:intron 45.0%
CATTTGGCTGGAATCACTGT+GGG - chr2_1:46990557-46990576 None:intergenic 45.0%
TCATTTGGCTGGAATCACTG+TGG - chr2_1:46990558-46990577 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - chr2_1:46990734-46990753 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr2_1:46990737-46990756 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr2_1:46990768-46990787 Msa0209350:intron 45.0%
ACTAATGCAGGGGAACTTCA+TGG - chr2_1:46991073-46991092 None:intergenic 45.0%
GGTTTGTGTGCAGCAAAGTT+TGG + chr2_1:46991240-46991259 Msa0209350:intron 45.0%
!!! CAGAGCATGTGCTTTTTCTG+AGG + chr2_1:46991313-46991332 Msa0209350:CDS 45.0%
TTGAGCAAGGACTGAGTGTA+TGG + chr2_1:46991663-46991682 Msa0209350:intron 45.0%
TGAGCAAGGACTGAGTGTAT+GGG + chr2_1:46991664-46991683 Msa0209350:intron 45.0%
! ATACCCACCTTTTGCTCACT+GGG + chr2_1:46991941-46991960 Msa0209350:CDS 45.0%
! ACTTCTTTAGGAGGTGCATC+AGG - chr2_1:46992006-46992025 None:intergenic 45.0%
TGATGCACCTCCTAAAGAAG+TGG + chr2_1:46992005-46992024 Msa0209350:CDS 45.0%
ATAAATCCCCTGGTTCAGTC+AGG + chr2_1:46992028-46992047 Msa0209350:CDS 45.0%
GGCCAACTGTCAACATAGTA+TGG - chr2_1:46992134-46992153 None:intergenic 45.0%
AGGCTATGGGATGTAAGAAC+TGG + chr2_1:46992259-46992278 Msa0209350:intron 45.0%
CTCACTTCAGCACTAGTCAT+AGG - chr2_1:46992316-46992335 None:intergenic 45.0%
CTATGACATGCCTTGCAATG+TGG + chr2_1:46992501-46992520 Msa0209350:CDS 45.0%
! GAAGCTGATTCCACATTGCA+AGG - chr2_1:46992514-46992533 None:intergenic 45.0%
!! GGTAACAAGTTTGTTGCTGG+GGG + chr2_1:46992550-46992569 Msa0209350:CDS 45.0%
TAGGGGGGAAAAGTTGAAAC+TGG - chr2_1:46992709-46992728 None:intergenic 45.0%
! ACTGACTCATGCTTTGTAGG+GGG - chr2_1:46992725-46992744 None:intergenic 45.0%
TACGGTGTTCTATCTGGTGA+TGG + chr2_1:46993102-46993121 Msa0209350:intron 45.0%
GCATGCAACAAAGGACATCA+TGG + chr2_1:46993127-46993146 Msa0209350:intron 45.0%
ACCATCAGAATATGGCAGAC+AGG + chr2_1:46993214-46993233 Msa0209350:CDS 45.0%
CCATCAGAATATGGCAGACA+GGG + chr2_1:46993215-46993234 Msa0209350:CDS 45.0%
ACCAAATGGAACCCTGGAAA+AGG + chr2_1:46993270-46993289 Msa0209350:CDS 45.0%
! TCCTTTTCCAGGGTTCCATT+TGG - chr2_1:46993274-46993293 None:intergenic 45.0%
! CATTTGCCTTCTCCTTTTCC+AGG - chr2_1:46993285-46993304 None:intergenic 45.0%
AAAGGAGAAGGCAAATGCAG+AGG + chr2_1:46993288-46993307 Msa0209350:CDS 45.0%
! GGGTTTTCATATTGCAGAGG+AGG + chr2_1:46993333-46993352 Msa0209350:CDS 45.0%
CTCTTCCTTTCCTTTGGACT+TGG - chr2_1:46993359-46993378 None:intergenic 45.0%
CAAGTCCAAAGGAAAGGAAG+AGG + chr2_1:46993357-46993376 Msa0209350:CDS 45.0%
CATGTATATTAGAGGGCCCA+AGG - chr2_1:46993459-46993478 None:intergenic 45.0%
TCAGCGAGATATTCTCTGCA+GGG - chr2_1:46993699-46993718 None:intergenic 45.0%
TGCAGAGAATATCTCGCTGA+GGG + chr2_1:46993699-46993718 Msa0209350:three_prime_UTR 45.0%
AAGTAACACAGAGCTGGGAG+AGG - chr2_1:46987197-46987216 None:intergenic 50.0%
GGGTAGAAGTAACACAGAGC+TGG - chr2_1:46987203-46987222 None:intergenic 50.0%
GAGTGACCGTGACAAACAAG+AGG - chr2_1:46987563-46987582 None:intergenic 50.0%
TAGATGCTAGTCCCATGCTG+AGG + chr2_1:46987862-46987881 Msa0209350:intron 50.0%
GTCTCTCCATTCCTCAGCAT+GGG - chr2_1:46987876-46987895 None:intergenic 50.0%
AGTCTCTCCATTCCTCAGCA+TGG - chr2_1:46987877-46987896 None:intergenic 50.0%
ATGCTGAGGAATGGAGAGAC+TGG + chr2_1:46987876-46987895 Msa0209350:CDS 50.0%
GGAATGGAGAGACTGGAGAT+TGG + chr2_1:46987883-46987902 Msa0209350:CDS 50.0%
GGAGAGACTGGAGATTGGAT+TGG + chr2_1:46987888-46987907 Msa0209350:CDS 50.0%
TGAGGAAGTGGGATCCAGTA+TGG - chr2_1:46988549-46988568 None:intergenic 50.0%
GCAAGCACATGATGAGGAAG+TGG - chr2_1:46988561-46988580 None:intergenic 50.0%
!!! TGGGGAAAGGGGGGTATTTT+TGG - chr2_1:46988986-46989005 None:intergenic 50.0%
TGTTACAAGTGGCTGGGTGT+GGG - chr2_1:46989905-46989924 None:intergenic 50.0%
ATGTTACAAGTGGCTGGGTG+TGG - chr2_1:46989906-46989925 None:intergenic 50.0%
CCAGAAGCAATGTTGGGTGT+GGG - chr2_1:46990178-46990197 None:intergenic 50.0%
TCCAGAAGCAATGTTGGGTG+TGG - chr2_1:46990179-46990198 None:intergenic 50.0%
CACCCAACATTGCTTCTGGA+AGG + chr2_1:46990179-46990198 Msa0209350:intron 50.0%
CCACCTTCCAGAAGCAATGT+TGG - chr2_1:46990185-46990204 None:intergenic 50.0%
! CCAACATTGCTTCTGGAAGG+TGG + chr2_1:46990182-46990201 Msa0209350:intron 50.0%
ACAGAAGAAAGGGACCAGAC+TGG + chr2_1:46990225-46990244 Msa0209350:intron 50.0%
! TGCGATTGGTTGTTCCAGTC+TGG - chr2_1:46990242-46990261 None:intergenic 50.0%
TGGGGTCACAATCACTGTTG+TGG - chr2_1:46990404-46990423 None:intergenic 50.0%
TGATTGTGACCCCAGTGTCT+AGG + chr2_1:46990410-46990429 Msa0209350:intron 50.0%
TGCATCAAATACACCCGGTG+TGG - chr2_1:46990461-46990480 None:intergenic 50.0%
CACTCGTGAAGTTCAAGTCC+TGG - chr2_1:46990789-46990808 None:intergenic 50.0%
! GATACCCACCTTTTGCTCAC+TGG + chr2_1:46991940-46991959 Msa0209350:CDS 50.0%
! TACCCACCTTTTGCTCACTG+GGG + chr2_1:46991942-46991961 Msa0209350:CDS 50.0%
AACACTCCTGACTGAACCAG+GGG - chr2_1:46992037-46992056 None:intergenic 50.0%
CAACACTCCTGACTGAACCA+GGG - chr2_1:46992038-46992057 None:intergenic 50.0%
!! GTTCAGTCAGGAGTGTTGCA+TGG + chr2_1:46992040-46992059 Msa0209350:CDS 50.0%
AGCACTAGTCATAGGCGACT+TGG - chr2_1:46992308-46992327 None:intergenic 50.0%
! GACTAGTGCTGAAGTGAGTC+AGG + chr2_1:46992318-46992337 Msa0209350:CDS 50.0%
! AGTGCTGAAGTGAGTCAGGA+TGG + chr2_1:46992322-46992341 Msa0209350:CDS 50.0%
GCTTCGTTAGAGCCCAAGTT+TGG + chr2_1:46992529-46992548 Msa0209350:CDS 50.0%
TTCCATACGGGCGATGAGAT+TGG + chr2_1:46992601-46992620 Msa0209350:CDS 50.0%
TACCAATCTCATCGCCCGTA+TGG - chr2_1:46992606-46992625 None:intergenic 50.0%
CTGACTCATGCTTTGTAGGG+GGG - chr2_1:46992724-46992743 None:intergenic 50.0%
GTGATGGCAGCATGCAACAA+AGG + chr2_1:46993118-46993137 Msa0209350:intron 50.0%
ATGGTCCTGTACACTGTGTC+CGG + chr2_1:46993146-46993165 Msa0209350:CDS 50.0%
ATTCTCCTCCAGGAGAGAAC+CGG - chr2_1:46993168-46993187 None:intergenic 50.0%
GATGCATACGATTCTCCTCC+AGG - chr2_1:46993178-46993197 None:intergenic 50.0%
GGAGGAGAATCGTATGCATC+AGG + chr2_1:46993178-46993197 Msa0209350:CDS 50.0%
ATCGTATGCATCAGGATCCG+AGG + chr2_1:46993186-46993205 Msa0209350:CDS 50.0%
TATGCATCAGGATCCGAGGA+TGG + chr2_1:46993190-46993209 Msa0209350:CDS 50.0%
CCCTGTCTGCCATATTCTGA+TGG - chr2_1:46993218-46993237 None:intergenic 50.0%
TGGAACCCTGGAAAAGGAGA+AGG + chr2_1:46993276-46993295 Msa0209350:CDS 50.0%
GTCCAAAGGAAAGGAAGAGG+CGG + chr2_1:46993360-46993379 Msa0209350:CDS 50.0%
TCCAAAGGAAAGGAAGAGGC+GGG + chr2_1:46993361-46993380 Msa0209350:CDS 50.0%
TCAGGGAGTTTGTGGGATAC+TGG + chr2_1:46993578-46993597 Msa0209350:three_prime_UTR 50.0%
CTCAGCGAGATATTCTCTGC+AGG - chr2_1:46993700-46993719 None:intergenic 50.0%
CTGCAGAGAATATCTCGCTG+AGG + chr2_1:46993698-46993717 Msa0209350:three_prime_UTR 50.0%
GAGAATATCTCGCTGAGGGT+AGG + chr2_1:46993703-46993722 Msa0209350:three_prime_UTR 50.0%
ATATCTCGCTGAGGGTAGGT+TGG + chr2_1:46993707-46993726 Msa0209350:three_prime_UTR 50.0%
TATCTCGCTGAGGGTAGGTT+GGG + chr2_1:46993708-46993727 Msa0209350:three_prime_UTR 50.0%
GTCCAGAACGACAGCGTAAG+AGG + chr2_1:46987085-46987104 Msa0209350:five_prime_UTR 55.0%
CTCCTCTTACGCTGTCGTTC+TGG - chr2_1:46987090-46987109 None:intergenic 55.0%
ACACAGAGCTGGGAGAGGAA+GGG - chr2_1:46987192-46987211 None:intergenic 55.0%
AACACAGAGCTGGGAGAGGA+AGG - chr2_1:46987193-46987212 None:intergenic 55.0%
CCTCCTAACCCTCAAAGCTC+TGG - chr2_1:46987354-46987373 None:intergenic 55.0%
!! CCAGAGCTTTGAGGGTTAGG+AGG + chr2_1:46987351-46987370 Msa0209350:five_prime_UTR 55.0%
GCTAGTCCCATGCTGAGGAA+TGG + chr2_1:46987867-46987886 Msa0209350:CDS 55.0%
ACTGTGTCCCTTCCTCCTAG+TGG + chr2_1:46988616-46988635 Msa0209350:intron 55.0%
GAACAGTAGGCTAGGCCACT+AGG - chr2_1:46988634-46988653 None:intergenic 55.0%
AGTGGACGTGGTTGGGGAAA+GGG - chr2_1:46988998-46989017 None:intergenic 55.0%
AAGTGGACGTGGTTGGGGAA+AGG - chr2_1:46988999-46989018 None:intergenic 55.0%
ATGTTGGGTGTGGGACAGTG+TGG - chr2_1:46990169-46990188 None:intergenic 55.0%
CCCACACCCAACATTGCTTC+TGG + chr2_1:46990175-46990194 Msa0209350:intron 55.0%
TCCACGCATAGTGACCACAC+CGG + chr2_1:46990444-46990463 Msa0209350:intron 55.0%
GGCTGGAATCACTGTGGGAT+TGG - chr2_1:46990552-46990571 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG + chr2_1:46990693-46990712 Msa0209350:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG + chr2_1:46990694-46990713 Msa0209350:intron 55.0%
! ACCCACCTTTTGCTCACTGG+GGG + chr2_1:46991943-46991962 Msa0209350:CDS 55.0%
TCCCCCAGTGAGCAAAAGGT+GGG - chr2_1:46991947-46991966 None:intergenic 55.0%
GCAACACTCCTGACTGAACC+AGG - chr2_1:46992039-46992058 None:intergenic 55.0%
!! GTACTGATATGGGAGGCGTC+AGG + chr2_1:46992094-46992113 Msa0209350:CDS 55.0%
!! GCGACTTGGTGTCAAGTGTC+TGG - chr2_1:46992294-46992313 None:intergenic 55.0%
TTGCTGGGGGAGAAGACTTG+TGG + chr2_1:46992563-46992582 Msa0209350:CDS 55.0%
TGCTGGGGGAGAAGACTTGT+GGG + chr2_1:46992564-46992583 Msa0209350:CDS 55.0%
GAGAACCGGACACAGTGTAC+AGG - chr2_1:46993154-46993173 None:intergenic 55.0%
GGAGAAGGCAAATGCAGAGG+AGG + chr2_1:46993291-46993310 Msa0209350:CDS 55.0%
GAAGGCAAATGCAGAGGAGG+AGG + chr2_1:46993294-46993313 Msa0209350:CDS 55.0%
GAGGTTTCGCGCAGGATTGA+GGG + chr2_1:46993313-46993332 Msa0209350:CDS 55.0%
GGAGGCCAAGTCCAAAGGAA+AGG + chr2_1:46993351-46993370 Msa0209350:CDS 55.0%
CCAAAGGAAAGGAAGAGGCG+GGG + chr2_1:46993362-46993381 Msa0209350:CDS 55.0%
CAAAGGAAAGGAAGAGGCGG+GGG + chr2_1:46993363-46993382 Msa0209350:CDS 55.0%
! GACTAGTCGGACGGACGAGA+TGG - chr2_1:46987121-46987140 None:intergenic 60.0%
GGCTAGGCCACTAGGAGGAA+GGG - chr2_1:46988626-46988645 None:intergenic 60.0%
AGGCTAGGCCACTAGGAGGA+AGG - chr2_1:46988627-46988646 None:intergenic 60.0%
CAGTAGGCTAGGCCACTAGG+AGG - chr2_1:46988631-46988650 None:intergenic 60.0%
! GTGTAATGGGGTTGGGCGCT+CGG + chr2_1:46988884-46988903 Msa0209350:intron 60.0%
TGGACGTGGTTGGGGAAAGG+GGG - chr2_1:46988996-46989015 None:intergenic 60.0%
GTGGACGTGGTTGGGGAAAG+GGG - chr2_1:46988997-46989016 None:intergenic 60.0%
AAGTGGCTGGGTGTGGGACA+GGG - chr2_1:46989899-46989918 None:intergenic 60.0%
CCACGCATAGTGACCACACC+GGG + chr2_1:46990445-46990464 Msa0209350:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG - chr2_1:46990689-46990708 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr2_1:46990705-46990724 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr2_1:46990706-46990725 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr2_1:46990705-46990724 Msa0209350:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr2_1:46990706-46990725 Msa0209350:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr2_1:46990721-46990740 None:intergenic 60.0%
CTCCCCCAGTGAGCAAAAGG+TGG - chr2_1:46991948-46991967 None:intergenic 60.0%
CTGCTCCCCCAGTGAGCAAA+AGG - chr2_1:46991951-46991970 None:intergenic 60.0%
CACTGTGTCCGGTTCTCTCC+TGG + chr2_1:46993157-46993176 Msa0209350:CDS 60.0%
TGTGTCCGGTTCTCTCCTGG+AGG + chr2_1:46993160-46993179 Msa0209350:CDS 60.0%
GGAGGTTTCGCGCAGGATTG+AGG + chr2_1:46993312-46993331 Msa0209350:CDS 60.0%
GCAGAGGAGGCCAAGTCCAA+AGG + chr2_1:46993346-46993365 Msa0209350:CDS 60.0%
CCCCGCCTCTTCCTTTCCTT+TGG - chr2_1:46993365-46993384 None:intergenic 60.0%
GCAAACCAATCCCTGCGCCC+TGG + chr2_1:46987166-46987185 Msa0209350:five_prime_UTR 65.0%
AGCTGGGAGAGGAAGGGCCA+GGG - chr2_1:46987186-46987205 None:intergenic 65.0%
AAAAAGAGCGGCGAGCCGCG+GGG - chr2_1:46988960-46988979 None:intergenic 65.0%
CAAAAAGAGCGGCGAGCCGC+GGG - chr2_1:46988961-46988980 None:intergenic 65.0%
GCAAAAAGAGCGGCGAGCCG+CGG - chr2_1:46988962-46988981 None:intergenic 65.0%
GGACGTGGTTGGGGAAAGGG+GGG - chr2_1:46988995-46989014 None:intergenic 65.0%
CAAGTGGCTGGGTGTGGGAC+AGG - chr2_1:46989900-46989919 None:intergenic 65.0%
CCCGGTGTGGTCACTATGCG+TGG - chr2_1:46990448-46990467 None:intergenic 65.0%
CAAGGATCACAGCGCAGCCG+TGG + chr2_1:46990495-46990514 Msa0209350:intron 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG - chr2_1:46990688-46990707 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr2_1:46990699-46990718 Msa0209350:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr2_1:46990700-46990719 Msa0209350:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr2_1:46990704-46990723 Msa0209350:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr2_1:46990719-46990738 Msa0209350:intron 65.0%
CAGAGGAGGAGGTTTCGCGC+AGG + chr2_1:46993305-46993324 Msa0209350:CDS 65.0%
AGGAAAGGAAGAGGCGGGGG+TGG + chr2_1:46993366-46993385 Msa0209350:CDS 65.0%
AAGGGCCAGGGCGCAGGGAT+TGG - chr2_1:46987174-46987193 None:intergenic 70.0%
AGAGGAAGGGCCAGGGCGCA+GGG - chr2_1:46987179-46987198 None:intergenic 70.0%
GAGCTGGGAGAGGAAGGGCC+AGG - chr2_1:46987187-46987206 None:intergenic 70.0%
AAAAGAGCGGCGAGCCGCGG+GGG - chr2_1:46988959-46988978 None:intergenic 70.0%
TGGCTGGGTGTGGGACAGGG+TGG - chr2_1:46989896-46989915 None:intergenic 70.0%
GGATCACAGCGCAGCCGTGG+TGG + chr2_1:46990498-46990517 Msa0209350:intron 70.0%
GAGAGGAAGGGCCAGGGCGC+AGG - chr2_1:46987180-46987199 None:intergenic 75.0%
AAAGAGCGGCGAGCCGCGGG+GGG - chr2_1:46988958-46988977 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 46987053 46993736 46987053 ID=Msa0209350;Name=Msa0209350
chr2_1 mRNA 46987053 46993736 46987053 ID=Msa0209350-mRNA-1;Parent=Msa0209350;Name=Msa0209350-mRNA-1;_AED=0.05;_eAED=0.05;_QI=483|1|1|1|1|1|7|340|352
chr2_1 exon 46987053 46987653 46987053 ID=Msa0209350-mRNA-1:exon:13363;Parent=Msa0209350-mRNA-1
chr2_1 exon 46987865 46988000 46987865 ID=Msa0209350-mRNA-1:exon:13364;Parent=Msa0209350-mRNA-1
chr2_1 exon 46991253 46991334 46991253 ID=Msa0209350-mRNA-1:exon:13365;Parent=Msa0209350-mRNA-1
chr2_1 exon 46991940 46992115 46991940 ID=Msa0209350-mRNA-1:exon:13366;Parent=Msa0209350-mRNA-1
chr2_1 exon 46992261 46992398 46992261 ID=Msa0209350-mRNA-1:exon:13367;Parent=Msa0209350-mRNA-1
chr2_1 exon 46992483 46992622 46992483 ID=Msa0209350-mRNA-1:exon:13368;Parent=Msa0209350-mRNA-1
chr2_1 exon 46993128 46993736 46993128 ID=Msa0209350-mRNA-1:exon:13369;Parent=Msa0209350-mRNA-1
chr2_1 five_prime_UTR 46987053 46987535 46987053 ID=Msa0209350-mRNA-1:five_prime_utr;Parent=Msa0209350-mRNA-1
chr2_1 CDS 46987536 46987653 46987536 ID=Msa0209350-mRNA-1:cds;Parent=Msa0209350-mRNA-1
chr2_1 CDS 46987865 46988000 46987865 ID=Msa0209350-mRNA-1:cds;Parent=Msa0209350-mRNA-1
chr2_1 CDS 46991253 46991334 46991253 ID=Msa0209350-mRNA-1:cds;Parent=Msa0209350-mRNA-1
chr2_1 CDS 46991940 46992115 46991940 ID=Msa0209350-mRNA-1:cds;Parent=Msa0209350-mRNA-1
chr2_1 CDS 46992261 46992398 46992261 ID=Msa0209350-mRNA-1:cds;Parent=Msa0209350-mRNA-1
chr2_1 CDS 46992483 46992622 46992483 ID=Msa0209350-mRNA-1:cds;Parent=Msa0209350-mRNA-1
chr2_1 CDS 46993128 46993396 46993128 ID=Msa0209350-mRNA-1:cds;Parent=Msa0209350-mRNA-1
chr2_1 three_prime_UTR 46993397 46993736 46993397 ID=Msa0209350-mRNA-1:three_prime_utr;Parent=Msa0209350-mRNA-1
Gene Sequence

>Msa0209350

ATGGAAAAGAAAAAAGTTACGGTACCTCTTGTTTGTCACGGTCACTCTCGTCCAGTTGTTGATCTCTTTTACAGTCCTGTTACTCCTGATGGTTTCTTTCTTATTAGCGCAAGCAAAGATGCTAGTCCCATGCTGAGGAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCATAAAGGTGCTGTTTGGAGTTGTTGTTTGGATGCTAATGCTTTGCGCGCTGCTACTGCTTCTGCTGATTTCTCAACCAAAGTTTGGGATGCATTAACAGGTGACGCGTTACATTCTTTTGAGCATAAGCACATTGTCAGAGCATGTGCTTTTTCTGAGGATACCCACCTTTTGCTCACTGGGGGAGCAGAGAAAATTCTCCGAATTTATGATTTGAATCGGCCTGATGCACCTCCTAAAGAAGTGGATAAATCCCCTGGTTCAGTCAGGAGTGTTGCATGGCTTCATAGTGACCAGACTATATTGAGTTCATGTACTGATATGGGAGGCGTCAGGCTATGGGATGTAAGAACTGGTAAAATTGTCCAGACACTTGACACCAAGTCGCCTATGACTAGTGCTGAAGTGAGTCAGGATGGTCGCTATATTACAACTGCTGATGGTTCTACTGTCAAGTTTTGGGATGCAAATCACTATGGATTGGTGAAGAGCTATGACATGCCTTGCAATGTGGAATCAGCTTCGTTAGAGCCCAAGTTTGGTAACAAGTTTGTTGCTGGGGGAGAAGACTTGTGGGTTCATGTTTTTGATTTCCATACGGGCGATGAGATTGCATGCAACAAAGGACATCATGGTCCTGTACACTGTGTCCGGTTCTCTCCTGGAGGAGAATCGTATGCATCAGGATCCGAGGATGGAACCATCAGAATATGGCAGACAGGGCCATTGACTCATGATGAATCAGAGGGTTTATCACCAAATGGAACCCTGGAAAAGGAGAAGGCAAATGCAGAGGAGGAGGTTTCGCGCAGGATTGAGGGTTTTCATATTGCAGAGGAGGCCAAGTCCAAAGGAAAGGAAGAGGCGGGGGTGGAATTATGA
Protein sequence

>Msa0209350

MEKKKVTVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDASPMLRNGETGDWIGTFEGHKGAVWSCCLDANALRAATASADFSTKVWDALTGDALHSFEHKHIVRACAFSEDTHLLLTGGAEKILRIYDLNRPDAPPKEVDKSPGSVRSVAWLHSDQTILSSCTDMGGVRLWDVRTGKIVQTLDTKSPMTSAEVSQDGRYITTADGSTVKFWDANHYGLVKSYDMPCNVESASLEPKFGNKFVAGGEDLWVHVFDFHTGDEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTHDESEGLSPNGTLEKEKANAEEEVSRRIEGFHIAEEAKSKGKEEAGVEL*