AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0305410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0305410 MtrunA17_Chr2g0333591 99.552 446 2 0 1 446 1 446 0.0 929
Msa0305410 MtrunA17_Chr4g0064091 47.674 430 213 7 27 445 27 455 1.22e-139 409
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0305410 AT2G26000.3 65.238 420 129 4 25 428 20 438 0.0 589
Msa0305410 AT2G26000.2 65.238 420 129 4 25 428 20 438 0.0 589
Msa0305410 AT2G26000.1 62.143 420 124 5 25 428 20 420 0.0 553
Msa0305410 AT2G42160.1 43.584 452 240 5 4 443 11 459 1.30e-134 396
Msa0305410 AT2G42160.2 44.342 433 228 4 4 424 11 442 1.56e-132 390
Msa0305410 AT2G42160.3 44.643 392 204 4 4 383 11 401 9.37e-120 355

Find 122 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGCGAGTTTCTTCGATTCT+AGG 0.180431 2_3:-63055987 None:intergenic
TTGTTCTACTTGTTGTAATA+AGG 0.203104 2_3:-63058506 None:intergenic
ACTTTAGATGTGCAGTATAC+TGG 0.212917 2_3:+63056701 Msa0305410:CDS
CGTTTCTTTCCAGTGTATTA+TGG 0.244965 2_3:-63057903 None:intergenic
AACTAACTTCCCATCAGTTT+TGG 0.267305 2_3:-63058008 None:intergenic
GAAACCACTGGCGTGTGTTT+TGG 0.269399 2_3:+63056141 Msa0305410:CDS
TAACAAAGAGAAGAAGTTTC+TGG 0.277286 2_3:+63058612 Msa0305410:CDS
AACCTCATGGTTTGTCTTGA+GGG 0.281710 2_3:+63059358 Msa0305410:CDS
AGAGAAGGAGGGGTTTGTTC+GGG 0.282903 2_3:-63056026 None:intergenic
ACGCTTAGTTTCCACTTCTA+AGG 0.286554 2_3:-63057939 None:intergenic
ACAAGCGAAGGCTAAAAGTT+TGG 0.295060 2_3:+63055836 Msa0305410:five_prime_UTR
AAGAAAAGCATGGTAGAAAA+AGG 0.322143 2_3:+63059481 Msa0305410:three_prime_UTR
TCGTCTTGATTCAGATATAA+AGG 0.340162 2_3:+63057872 Msa0305410:intron
AAGTGGAAACTAAGCGTGTC+TGG 0.346083 2_3:+63057945 Msa0305410:CDS
GACTTTGTTGGGAGTTGAAC+GGG 0.363320 2_3:+63059517 Msa0305410:three_prime_UTR
TGAAATGCGTATTGTTAGAA+TGG 0.371128 2_3:+63056231 Msa0305410:CDS
ATTGCTCCTGTATTTCGAAA+TGG 0.378523 2_3:+63057347 Msa0305410:CDS
AGTCAACTTGTAGCTCTTAC+TGG 0.378889 2_3:+63059457 Msa0305410:three_prime_UTR
GAGATGAACATGTTTATAAC+TGG 0.378957 2_3:+63059903 Msa0305410:three_prime_UTR
AGATTCAGTTTGTTCTTCTT+CGG 0.382285 2_3:-63055922 None:intergenic
GTCAAACCACTGAGAACCTT+TGG 0.385240 2_3:+63057700 Msa0305410:CDS
TCCGCATAAGTCATGTGATT+TGG 0.386992 2_3:-63056169 None:intergenic
CTCTTCAATCTCAAGTAACT+TGG 0.391711 2_3:-63058912 None:intergenic
CAAGCGAAGGCTAAAAGTTT+GGG 0.392287 2_3:+63055837 Msa0305410:five_prime_UTR
TCATTTCATTAGACTTTGTT+GGG 0.393538 2_3:+63059506 Msa0305410:three_prime_UTR
TCTCAAACAGCATAAGATTC+AGG 0.394917 2_3:+63058573 Msa0305410:CDS
TGCAATGTACCAAGGCAAAC+TGG 0.398866 2_3:-63056779 None:intergenic
AAGAGAAGGAGGGGTTTGTT+CGG 0.400079 2_3:-63056027 None:intergenic
ATCATTTCATTAGACTTTGT+TGG 0.402026 2_3:+63059505 Msa0305410:three_prime_UTR
ACAAACCCCTCCTTCTCTTC+CGG 0.410389 2_3:+63056031 Msa0305410:CDS
ATAGGTAAAGGGAAAGGCTT+TGG 0.410410 2_3:+63059597 Msa0305410:three_prime_UTR
CTTTAAAGCTGACTACTGAT+AGG 0.411800 2_3:+63059162 Msa0305410:CDS
ATCTGCCCATTTCGAAATAC+AGG 0.412417 2_3:-63057353 None:intergenic
TGTGTTATATGTGGGTTTGT+TGG 0.419958 2_3:+63057726 Msa0305410:CDS
CGCGAGTTTCTTCGATTCTA+GGG 0.435733 2_3:-63055986 None:intergenic
TAACCTCATGGTTTGTCTTG+AGG 0.435978 2_3:+63059357 Msa0305410:CDS
TTGCTCCTGTATTTCGAAAT+GGG 0.440003 2_3:+63057348 Msa0305410:CDS
CGAATTAGATGCTAAATAGT+AGG 0.442389 2_3:+63059958 Msa0305410:three_prime_UTR
CTTTAGATGTGCAGTATACT+GGG 0.449924 2_3:+63056702 Msa0305410:CDS
CTTTGGATATGTGTTATATG+TGG 0.462563 2_3:+63057717 Msa0305410:CDS
ATATGTGGGTTTGTTGGCTG+TGG 0.470616 2_3:+63057732 Msa0305410:CDS
TTTAGGAGCAGAAAAGAGAA+AGG 0.479276 2_3:-63059719 None:intergenic
CTTCTAAACAAGCACTGGTT+AGG 0.481009 2_3:+63059747 Msa0305410:three_prime_UTR
CATTTGCATTTGACAATGGC+GGG 0.494770 2_3:-63059399 None:intergenic
ATCATCTTCTAAACAAGCAC+TGG 0.496367 2_3:+63059742 Msa0305410:three_prime_UTR
TGTTGGGAGTTGAACGGGAA+AGG 0.498327 2_3:+63059522 Msa0305410:three_prime_UTR
TATAACTGGATCACAGAGTT+GGG 0.500861 2_3:+63059917 Msa0305410:three_prime_UTR
GTGGGTTTGTTGGCTGTGGA+AGG 0.501678 2_3:+63057736 Msa0305410:CDS
CTTATTCAGTCCAAAACTGA+TGG 0.502793 2_3:+63057998 Msa0305410:CDS
CAGCTTGTTGTTGGCAATAG+CGG 0.506033 2_3:-63057656 None:intergenic
CCATTGTCAAATGCAAATGA+TGG 0.510740 2_3:+63059403 Msa0305410:CDS
TGTAAGTATAACAGTGGTGC+AGG 0.518911 2_3:-63059774 None:intergenic
CCATCATTTGCATTTGACAA+TGG 0.524558 2_3:-63059403 None:intergenic
AGAGAAGAAGTTTCTGGATG+AGG 0.524969 2_3:+63058618 Msa0305410:CDS
CTGTTCAGTTGAAGTAGCAT+TGG 0.526346 2_3:-63056747 None:intergenic
TTGGAGGTTACCGGAAGAGA+AGG 0.532174 2_3:-63056041 None:intergenic
GCATTGCTATTCCTTAGAAG+TGG 0.532695 2_3:+63057928 Msa0305410:CDS
AACACTGTAACGATCTTCCA+TGG 0.534895 2_3:-63056257 None:intergenic
ATGGAAAGAATGATTGCATA+TGG 0.537548 2_3:-63057326 None:intergenic
AACACACCACTGCTAGTTCG+AGG 0.539492 2_3:+63059569 Msa0305410:three_prime_UTR
TTGTCTTGAGGGTGGGAAGA+CGG 0.545167 2_3:+63059369 Msa0305410:CDS
TCATGGTTTGTCTTGAGGGT+GGG 0.549592 2_3:+63059362 Msa0305410:CDS
GAGAAGGAGGGGTTTGTTCG+GGG 0.551624 2_3:-63056025 None:intergenic
AGAGGGACATGAACGAGGTA+AGG 0.552203 2_3:+63059545 Msa0305410:three_prime_UTR
ATTCGATGAACAAGATTCTA+CGG 0.553091 2_3:+63056288 Msa0305410:CDS
TTATAACTGGATCACAGAGT+TGG 0.553754 2_3:+63059916 Msa0305410:three_prime_UTR
GTCAACTTGTAGCTCTTACT+GGG 0.556328 2_3:+63059458 Msa0305410:three_prime_UTR
TTTAAAGCTGACTACTGATA+GGG 0.560293 2_3:+63059163 Msa0305410:CDS
CTCATGGTTTGTCTTGAGGG+TGG 0.560470 2_3:+63059361 Msa0305410:CDS
GAGTTGAACGGGAAAGGAGA+GGG 0.563958 2_3:+63059528 Msa0305410:three_prime_UTR
GGTAACGGACCTAGAAAAGC+AGG 0.564937 2_3:+63059184 Msa0305410:CDS
TCATTTGCATTTGACAATGG+CGG 0.564960 2_3:-63059400 None:intergenic
TTTGGATATGTGTTATATGT+GGG 0.567381 2_3:+63057718 Msa0305410:CDS
GAGGTTACCGGAAGAGAAGG+AGG 0.567771 2_3:-63056038 None:intergenic
AGACTTTGTTGGGAGTTGAA+CGG 0.572484 2_3:+63059516 Msa0305410:three_prime_UTR
AGTGGAAACTAAGCGTGTCT+GGG 0.576313 2_3:+63057946 Msa0305410:CDS
CATGCAGACAGTGGCAGCTG+TGG 0.578082 2_3:+63058052 Msa0305410:CDS
GACAGCCTTCTGAACTGCTA+CGG 0.578151 2_3:-63058548 None:intergenic
CCTACATGTCCAGTTTGCCT+TGG 0.578352 2_3:+63056770 Msa0305410:CDS
TATTGTTAGAATGGAATCCA+TGG 0.580258 2_3:+63056240 Msa0305410:CDS
ATTTCGAAATACAGGAGCAA+TGG 0.582318 2_3:-63057345 None:intergenic
ACGTGAAGTTTGACAAGCGA+AGG 0.582851 2_3:+63055824 None:intergenic
AATTTCCGTAGCAGTTCAGA+AGG 0.584911 2_3:+63058543 Msa0305410:CDS
GCTCGCAAACAAACAAGGAA+TGG 0.585157 2_3:+63059647 Msa0305410:three_prime_UTR
TTAGGTTGGACGGAAACCAC+TGG 0.586248 2_3:+63056129 Msa0305410:intron
ATTAAGTATAGCCTCTCTCA+TGG 0.586613 2_3:-63058083 None:intergenic
AAAATGCTCGCAAACAAACA+AGG 0.588289 2_3:+63059642 Msa0305410:three_prime_UTR
ACTTAATAGTAAAGTTGAAG+CGG 0.592740 2_3:+63058099 Msa0305410:CDS
GGAGTTGAACGGGAAAGGAG+AGG 0.593791 2_3:+63059527 Msa0305410:three_prime_UTR
TGTACAGCTTAGTAACCTCA+TGG 0.595808 2_3:+63059345 Msa0305410:intron
GTTTATACAAACTAAACTGA+CGG 0.600733 2_3:+63059798 Msa0305410:three_prime_UTR
TCAGTTGAAGTAGCATTGGA+TGG 0.603843 2_3:-63056743 None:intergenic
AGGTTACCGGAAGAGAAGGA+GGG 0.603965 2_3:-63056037 None:intergenic
TGGAGATAATGCCATGAGAG+AGG 0.611254 2_3:+63058072 Msa0305410:CDS
CACATATAACACATATCCAA+AGG 0.611792 2_3:-63057716 None:intergenic
ACACACCACTGCTAGTTCGA+GGG 0.618812 2_3:+63059570 Msa0305410:three_prime_UTR
CTTGATTCAGATATAAAGGA+GGG 0.619034 2_3:+63057876 Msa0305410:intron
ATACAAACTAAACTGACGGA+TGG 0.619568 2_3:+63059802 Msa0305410:three_prime_UTR
CCAAGGCAAACTGGACATGT+AGG 0.620789 2_3:-63056770 None:intergenic
TTATTCAGTCCAAAACTGAT+GGG 0.621299 2_3:+63057999 Msa0305410:CDS
AAGCGTGTCTGGGATTATGT+CGG 0.621807 2_3:+63057956 Msa0305410:CDS
CACTGTGTGCATGCAGACAG+TGG 0.626099 2_3:+63058043 Msa0305410:CDS
GAGGGCATGCCATAATACAC+TGG 0.629668 2_3:+63057894 Msa0305410:CDS
CAAGTAGAACAAGAAACTGA+AGG 0.630137 2_3:+63058517 Msa0305410:CDS
GCTTTCTATACTCATTACAA+TGG 0.633984 2_3:+63056313 Msa0305410:CDS
CGATTAGATCAAGACACGAG+TGG 0.641720 2_3:+63057292 Msa0305410:CDS
TCTTACTGGGAAGAAAAGCA+TGG 0.643513 2_3:+63059471 Msa0305410:three_prime_UTR
GCTGACTACTGATAGGGTAA+CGG 0.644609 2_3:+63059169 Msa0305410:CDS
TTGAGCGCAGCGTAGCGATG+TGG 0.649278 2_3:+63055880 Msa0305410:exon
TCTTGATTCAGATATAAAGG+AGG 0.653143 2_3:+63057875 Msa0305410:intron
ACCAAATCACATGACTTATG+CGG 0.656198 2_3:+63056168 Msa0305410:CDS
GGTTACCGGAAGAGAAGGAG+GGG 0.664900 2_3:-63056036 None:intergenic
GTTCGGGGAAGACATGCATG+AGG 0.679806 2_3:-63056010 None:intergenic
TAAACTTGTAAGTATAACAG+TGG 0.681001 2_3:-63059780 None:intergenic
ACTCCCAAAACACACGCCAG+TGG 0.685338 2_3:-63056145 None:intergenic
ACATATCCAAAGGTTCTCAG+TGG 0.687079 2_3:-63057706 None:intergenic
AAAGGAGAGGGACATGAACG+AGG 0.695456 2_3:+63059540 Msa0305410:three_prime_UTR
CATCTAAAGTGAAAACAACA+CGG 0.710007 2_3:-63056688 None:intergenic
CCTAGAATCGAAGAAACTCG+CGG 0.716697 2_3:+63055987 Msa0305410:CDS
AGTTACTTGAGATTGAAGAG+AGG 0.724626 2_3:+63058915 Msa0305410:CDS
TAAGAGCTACAAGTTGACTG+AGG 0.728746 2_3:-63059453 None:intergenic
CACCCTCAAGACAAACCATG+AGG 0.740508 2_3:-63059360 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATACTACAATTAAAAAAA+GGG - chr2_3:63058481-63058500 None:intergenic 10.0%
!! AAAATACTACAATTAAAAAA+AGG - chr2_3:63058482-63058501 None:intergenic 10.0%
!!! ATTTTTTGTTTTTGTGAATT+AGG + chr2_3:63056111-63056130 Msa0305410:intron 15.0%
!! AATGAAAGAATTTAACAAAA+GGG - chr2_3:63057783-63057802 None:intergenic 15.0%
!!! TTTTCTCTTTTAATTGTATT+TGG + chr2_3:63057818-63057837 Msa0305410:intron 15.0%
!!! TGATGTATCTTTTTTTTTTT+TGG + chr2_3:63058164-63058183 Msa0305410:intron 15.0%
!!! GATATACTACTTTTTTTTAA+TGG - chr2_3:63058792-63058811 None:intergenic 15.0%
!!! TATAAATACTATTTTGAGAA+CGG - chr2_3:63058952-63058971 None:intergenic 15.0%
!!! TTTTTTTTTATCAAGAAACA+AGG + chr2_3:63059679-63059698 Msa0305410:three_prime_UTR 15.0%
!!! TTTTTTTTATCAAGAAACAA+GGG + chr2_3:63059680-63059699 Msa0305410:three_prime_UTR 15.0%
!! ACCATAAAATAGAATAGAAT+GGG - chr2_3:63056385-63056404 None:intergenic 20.0%
!! TACCATAAAATAGAATAGAA+TGG - chr2_3:63056386-63056405 None:intergenic 20.0%
!! ATAAACTACATTACATTAGA+AGG - chr2_3:63056846-63056865 None:intergenic 20.0%
!!! AGTATTGTTATTATTGTTGT+TGG + chr2_3:63057135-63057154 Msa0305410:intron 20.0%
!!! GTATTGTTATTATTGTTGTT+GGG + chr2_3:63057136-63057155 Msa0305410:intron 20.0%
!!! TATTGTTATTATTGTTGTTG+GGG + chr2_3:63057137-63057156 Msa0305410:intron 20.0%
!! CAATGAAAGAATTTAACAAA+AGG - chr2_3:63057784-63057803 None:intergenic 20.0%
!! ACAATTAAAAGAGAAAAGAA+AGG - chr2_3:63057815-63057834 None:intergenic 20.0%
!!! ATCTTTTTTTTTTTTGGTAG+TGG + chr2_3:63058170-63058189 Msa0305410:intron 20.0%
!! ATTAATAGTAGTATATCACA+AGG + chr2_3:63058756-63058775 Msa0305410:intron 20.0%
!! AAAAAAAGTAGTATATCACA+AGG + chr2_3:63058795-63058814 Msa0305410:intron 20.0%
!!! CTTTTTACATTTAGTTTCAT+GGG - chr2_3:63058990-63059009 None:intergenic 20.0%
!!! ACTTTTTACATTTAGTTTCA+TGG - chr2_3:63058991-63059010 None:intergenic 20.0%
!! TTAGTATGAATATTCTTGAA+CGG - chr2_3:63059291-63059310 None:intergenic 20.0%
!! AACAGAAAAAAAAATTCAAG+TGG - chr2_3:63059848-63059867 None:intergenic 20.0%
! AAATTGAAATTGAAGATTGG+AGG - chr2_3:63056060-63056079 None:intergenic 25.0%
! GGAAAATTGAAATTGAAGAT+TGG - chr2_3:63056063-63056082 None:intergenic 25.0%
!!! TTTGTTTTTGTGAATTAGGT+TGG + chr2_3:63056115-63056134 Msa0305410:intron 25.0%
!! TCCCATTCTATTCTATTTTA+TGG + chr2_3:63056381-63056400 Msa0305410:intron 25.0%
! AAATAGGCAAAAGAAAACAT+GGG - chr2_3:63056514-63056533 None:intergenic 25.0%
!! TTTTTCCCTATAACTACTTT+TGG + chr2_3:63057035-63057054 Msa0305410:intron 25.0%
! ATTCTCCAAAAGTAGTTATA+GGG - chr2_3:63057043-63057062 None:intergenic 25.0%
! AATTCTCCAAAAGTAGTTAT+AGG - chr2_3:63057044-63057063 None:intergenic 25.0%
! ATGAGAAGATGATGTTATAT+AGG + chr2_3:63057425-63057444 Msa0305410:intron 25.0%
! TGAGAAGATGATGTTATATA+GGG + chr2_3:63057426-63057445 Msa0305410:intron 25.0%
!! TTCTTTTTGAATCAGTCTAT+TGG + chr2_3:63057586-63057605 Msa0305410:intron 25.0%
! TTTGGATATGTGTTATATGT+GGG + chr2_3:63057718-63057737 Msa0305410:CDS 25.0%
! AAGAATTTAACAAAAGGGTT+GGG - chr2_3:63057778-63057797 None:intergenic 25.0%
! AAAGAATTTAACAAAAGGGT+TGG - chr2_3:63057779-63057798 None:intergenic 25.0%
! ACTTAATAGTAAAGTTGAAG+CGG + chr2_3:63058099-63058118 Msa0305410:CDS 25.0%
! ACAATGCATAAAAATATGCA+AGG - chr2_3:63058215-63058234 None:intergenic 25.0%
! TGACAATCTGTAAAAGAAAA+TGG - chr2_3:63058333-63058352 None:intergenic 25.0%
! ACAACTTGAAAACCAAAAAT+TGG + chr2_3:63058378-63058397 Msa0305410:CDS 25.0%
!!! TTGTTCTACTTGTTGTAATA+AGG - chr2_3:63058509-63058528 None:intergenic 25.0%
!! TATTCTTTTTGACAAAGACA+TGG - chr2_3:63058701-63058720 None:intergenic 25.0%
! AATAATTATAGCCATGTCAT+AGG + chr2_3:63058720-63058739 Msa0305410:intron 25.0%
!!! TTCTTTCGTATTTTTAATCC+TGG + chr2_3:63059226-63059245 Msa0305410:intron 25.0%
! ATCATTTCATTAGACTTTGT+TGG + chr2_3:63059505-63059524 Msa0305410:three_prime_UTR 25.0%
! TCATTTCATTAGACTTTGTT+GGG + chr2_3:63059506-63059525 Msa0305410:three_prime_UTR 25.0%
!! CTTGTTTAGAAGATGATTTT+AGG - chr2_3:63059739-63059758 None:intergenic 25.0%
! TAAACTTGTAAGTATAACAG+TGG - chr2_3:63059783-63059802 None:intergenic 25.0%
! GTTTATACAAACTAAACTGA+CGG + chr2_3:63059798-63059817 Msa0305410:three_prime_UTR 25.0%
!! ATTCGAAGACAACATTTTAT+GGG - chr2_3:63059943-63059962 None:intergenic 25.0%
!! AATTCGAAGACAACATTTTA+TGG - chr2_3:63059944-63059963 None:intergenic 25.0%
! AGATTCAGTTTGTTCTTCTT+CGG - chr2_3:63055925-63055944 None:intergenic 30.0%
! TCTCTTTTCAATTTCTCTTC+TGG + chr2_3:63055960-63055979 Msa0305410:CDS 30.0%
GAAGAAGAAGAAGATTGAAT+TGG - chr2_3:63056084-63056103 None:intergenic 30.0%
!!! TTTTTGTGAATTAGGTTGGA+CGG + chr2_3:63056119-63056138 Msa0305410:intron 30.0%
TGAAATGCGTATTGTTAGAA+TGG + chr2_3:63056231-63056250 Msa0305410:CDS 30.0%
TATTGTTAGAATGGAATCCA+TGG + chr2_3:63056240-63056259 Msa0305410:CDS 30.0%
ATTCGATGAACAAGATTCTA+CGG + chr2_3:63056288-63056307 Msa0305410:CDS 30.0%
GCTTTCTATACTCATTACAA+TGG + chr2_3:63056313-63056332 Msa0305410:CDS 30.0%
! TTGAATGTCGTTGACTAATT+TGG - chr2_3:63056489-63056508 None:intergenic 30.0%
CAAATAGGCAAAAGAAAACA+TGG - chr2_3:63056515-63056534 None:intergenic 30.0%
CACTCATGAAATTTGCAAAT+AGG - chr2_3:63056530-63056549 None:intergenic 30.0%
ATTCACCCCTAAAATTGTAA+GGG - chr2_3:63056564-63056583 None:intergenic 30.0%
AATTCACCCCTAAAATTGTA+AGG - chr2_3:63056565-63056584 None:intergenic 30.0%
!! TTACAATTTTAGGGGTGAAT+TGG + chr2_3:63056564-63056583 Msa0305410:intron 30.0%
!! GTGTTTGATTTGATGCATAT+AGG + chr2_3:63056655-63056674 Msa0305410:intron 30.0%
! CATCTAAAGTGAAAACAACA+CGG - chr2_3:63056691-63056710 None:intergenic 30.0%
! ATTTACCAAACTTGCTCTTA+AGG + chr2_3:63057065-63057084 Msa0305410:intron 30.0%
! TATGATTTGTGTTGCATGTA+TGG + chr2_3:63057171-63057190 Msa0305410:intron 30.0%
!! TTCTGAAGTGAACTATTCAT+TGG + chr2_3:63057198-63057217 Msa0305410:intron 30.0%
CATACACTAAGCGTTTAAAT+AGG + chr2_3:63057221-63057240 Msa0305410:intron 30.0%
ATGGAAAGAATGATTGCATA+TGG - chr2_3:63057329-63057348 None:intergenic 30.0%
ATACCTGAAAATATAAGCAG+GGG - chr2_3:63057635-63057654 None:intergenic 30.0%
CATACCTGAAAATATAAGCA+GGG - chr2_3:63057636-63057655 None:intergenic 30.0%
!!! TAGAATTTTCAGCTTGTTGT+TGG - chr2_3:63057668-63057687 None:intergenic 30.0%
CACATATAACACATATCCAA+AGG - chr2_3:63057719-63057738 None:intergenic 30.0%
CTTTGGATATGTGTTATATG+TGG + chr2_3:63057717-63057736 Msa0305410:CDS 30.0%
AGAATTTAACAAAAGGGTTG+GGG - chr2_3:63057777-63057796 None:intergenic 30.0%
TCGTCTTGATTCAGATATAA+AGG + chr2_3:63057872-63057891 Msa0305410:intron 30.0%
TCTTGATTCAGATATAAAGG+AGG + chr2_3:63057875-63057894 Msa0305410:intron 30.0%
CTTGATTCAGATATAAAGGA+GGG + chr2_3:63057876-63057895 Msa0305410:intron 30.0%
! TTTTGGACTGAATAAGTCTA+TGG - chr2_3:63057994-63058013 None:intergenic 30.0%
TTATTCAGTCCAAAACTGAT+GGG + chr2_3:63057999-63058018 Msa0305410:CDS 30.0%
!!! TTTTTTTTTTTGGTAGTGGC+CGG + chr2_3:63058174-63058193 Msa0305410:intron 30.0%
GATATACTGCAAATGACAAA+TGG - chr2_3:63058414-63058433 None:intergenic 30.0%
CTTTAATGTTTATACCAGAC+AGG - chr2_3:63058451-63058470 None:intergenic 30.0%
TAACAAAGAGAAGAAGTTTC+TGG + chr2_3:63058612-63058631 Msa0305410:CDS 30.0%
ACAAAGACATGGTTATAACT+TGG - chr2_3:63058690-63058709 None:intergenic 30.0%
!! TGACAATCTTTTGAAAAACG+AGG + chr2_3:63058877-63058896 Msa0305410:CDS 30.0%
AGCATATGACAATTACAAAG+TGG - chr2_3:63059054-63059073 None:intergenic 30.0%
TTGCAATTACTTCAAGACAT+GGG - chr2_3:63059084-63059103 None:intergenic 30.0%
TTTGCAATTACTTCAAGACA+TGG - chr2_3:63059085-63059104 None:intergenic 30.0%
TCTTGAAGTAATTGCAAATC+TGG + chr2_3:63059087-63059106 Msa0305410:intron 30.0%
!!! TACTTTTTTCAGGGAGAAAA+AGG + chr2_3:63059139-63059158 Msa0305410:intron 30.0%
! TTTAAAGCTGACTACTGATA+GGG + chr2_3:63059163-63059182 Msa0305410:CDS 30.0%
!! TTCGTATTTTTAATCCTGGA+AGG + chr2_3:63059230-63059249 Msa0305410:intron 30.0%
!! TCGTATTTTTAATCCTGGAA+GGG + chr2_3:63059231-63059250 Msa0305410:intron 30.0%
TTTGAGAACAAATCAAACAG+TGG - chr2_3:63059324-63059343 None:intergenic 30.0%
! AAGAAAAGCATGGTAGAAAA+AGG + chr2_3:63059481-63059500 Msa0305410:three_prime_UTR 30.0%
!!! TTTGCGAGCATTTTAAAACA+AGG - chr2_3:63059636-63059655 None:intergenic 30.0%
GAGATGAACATGTTTATAAC+TGG + chr2_3:63059903-63059922 Msa0305410:three_prime_UTR 30.0%
CGAATTAGATGCTAAATAGT+AGG + chr2_3:63059958-63059977 Msa0305410:three_prime_UTR 30.0%
AATTGAAGATTGGAGGTTAC+CGG - chr2_3:63056053-63056072 None:intergenic 35.0%
ACCAAATCACATGACTTATG+CGG + chr2_3:63056168-63056187 Msa0305410:CDS 35.0%
AGTCCTTACAAGTTAACAGA+TGG + chr2_3:63056462-63056481 Msa0305410:intron 35.0%
GATTTGATGCATATAGGTTG+AGG + chr2_3:63056661-63056680 Msa0305410:intron 35.0%
ACTTTAGATGTGCAGTATAC+TGG + chr2_3:63056701-63056720 Msa0305410:CDS 35.0%
CTTTAGATGTGCAGTATACT+GGG + chr2_3:63056702-63056721 Msa0305410:CDS 35.0%
AAGGTAAGCTGTAGTACATA+AGG - chr2_3:63056827-63056846 None:intergenic 35.0%
TTATAGATGCAAGCTGAGAA+AGG + chr2_3:63056862-63056881 Msa0305410:intron 35.0%
TATAGATGCAAGCTGAGAAA+GGG + chr2_3:63056863-63056882 Msa0305410:intron 35.0%
TGACAAGACAATGAGTTCTT+TGG - chr2_3:63057006-63057025 None:intergenic 35.0%
TACTACCTTAAGAGCAAGTT+TGG - chr2_3:63057073-63057092 None:intergenic 35.0%
! TGTTATTATTGTTGTTGGGG+TGG + chr2_3:63057140-63057159 Msa0305410:intron 35.0%
ATTTCGAAATACAGGAGCAA+TGG - chr2_3:63057348-63057367 None:intergenic 35.0%
ATTGCTCCTGTATTTCGAAA+TGG + chr2_3:63057347-63057366 Msa0305410:CDS 35.0%
TTGCTCCTGTATTTCGAAAT+GGG + chr2_3:63057348-63057367 Msa0305410:CDS 35.0%
ATGCATACATGGAAAAACAG+AGG - chr2_3:63057407-63057426 None:intergenic 35.0%
ATCATCTTCTCATGCATACA+TGG - chr2_3:63057418-63057437 None:intergenic 35.0%
TGTTTATACTTACTGTCAGC+TGG + chr2_3:63057534-63057553 Msa0305410:intron 35.0%
GTTTATACTTACTGTCAGCT+GGG + chr2_3:63057535-63057554 Msa0305410:intron 35.0%
GCATACCTGAAAATATAAGC+AGG - chr2_3:63057637-63057656 None:intergenic 35.0%
TGTGTTATATGTGGGTTTGT+TGG + chr2_3:63057726-63057745 Msa0305410:CDS 35.0%
GAATTTAACAAAAGGGTTGG+GGG - chr2_3:63057776-63057795 None:intergenic 35.0%
TTGCAACCATATGTATCATC+TGG + chr2_3:63057841-63057860 Msa0305410:intron 35.0%
AGAACTCCAGATGATACATA+TGG - chr2_3:63057850-63057869 None:intergenic 35.0%
CGTTTCTTTCCAGTGTATTA+TGG - chr2_3:63057906-63057925 None:intergenic 35.0%
CTTATTCAGTCCAAAACTGA+TGG + chr2_3:63057998-63058017 Msa0305410:CDS 35.0%
! AACTAACTTCCCATCAGTTT+TGG - chr2_3:63058011-63058030 None:intergenic 35.0%
ATTAAGTATAGCCTCTCTCA+TGG - chr2_3:63058086-63058105 None:intergenic 35.0%
!!! TTTTTTTTTTGGTAGTGGCC+GGG + chr2_3:63058175-63058194 Msa0305410:intron 35.0%
ATAAAAATATGCAAGGTCCG+GGG - chr2_3:63058208-63058227 None:intergenic 35.0%
CATAAAAATATGCAAGGTCC+GGG - chr2_3:63058209-63058228 None:intergenic 35.0%
GCATAAAAATATGCAAGGTC+CGG - chr2_3:63058210-63058229 None:intergenic 35.0%
! GGAATACACTCACCAATTTT+TGG - chr2_3:63058393-63058412 None:intergenic 35.0%
TAATGTTTATACCAGACAGG+AGG - chr2_3:63058448-63058467 None:intergenic 35.0%
CAAGTAGAACAAGAAACTGA+AGG + chr2_3:63058517-63058536 Msa0305410:CDS 35.0%
TCTCAAACAGCATAAGATTC+AGG + chr2_3:63058573-63058592 Msa0305410:CDS 35.0%
GTAAGTTGTAAGTCATGCTT+GGG + chr2_3:63058640-63058659 Msa0305410:intron 35.0%
TAAGTTGTAAGTCATGCTTG+GGG + chr2_3:63058641-63058660 Msa0305410:intron 35.0%
GAACACAAAATCCTATGACA+TGG - chr2_3:63058734-63058753 None:intergenic 35.0%
!! TTTTGAAAAACGAGGAGATC+TGG + chr2_3:63058885-63058904 Msa0305410:CDS 35.0%
CTCTTCAATCTCAAGTAACT+TGG - chr2_3:63058915-63058934 None:intergenic 35.0%
AGTTACTTGAGATTGAAGAG+AGG + chr2_3:63058915-63058934 Msa0305410:CDS 35.0%
! ACATTTAGTTTCATGGGACA+AGG - chr2_3:63058984-63059003 None:intergenic 35.0%
!!! ATGGGTGATGTACTTTTTTC+AGG + chr2_3:63059129-63059148 Msa0305410:intron 35.0%
!!! TGGGTGATGTACTTTTTTCA+GGG + chr2_3:63059130-63059149 Msa0305410:intron 35.0%
!! CTTTAAAGCTGACTACTGAT+AGG + chr2_3:63059162-63059181 Msa0305410:CDS 35.0%
!! CGTATTTTTAATCCTGGAAG+GGG + chr2_3:63059232-63059251 Msa0305410:intron 35.0%
GAACAAATCAAACAGTGGTT+TGG - chr2_3:63059319-63059338 None:intergenic 35.0%
TCATTTGCATTTGACAATGG+CGG - chr2_3:63059403-63059422 None:intergenic 35.0%
CCATCATTTGCATTTGACAA+TGG - chr2_3:63059406-63059425 None:intergenic 35.0%
CCATTGTCAAATGCAAATGA+TGG + chr2_3:63059403-63059422 Msa0305410:CDS 35.0%
TTCGAGGGAAAAATAGGTAA+AGG + chr2_3:63059585-63059604 Msa0305410:three_prime_UTR 35.0%
TCGAGGGAAAAATAGGTAAA+GGG + chr2_3:63059586-63059605 Msa0305410:three_prime_UTR 35.0%
GGAAAAATAGGTAAAGGGAA+AGG + chr2_3:63059591-63059610 Msa0305410:three_prime_UTR 35.0%
AAAATGCTCGCAAACAAACA+AGG + chr2_3:63059642-63059661 Msa0305410:three_prime_UTR 35.0%
TTTAGGAGCAGAAAAGAGAA+AGG - chr2_3:63059722-63059741 None:intergenic 35.0%
ATCATCTTCTAAACAAGCAC+TGG + chr2_3:63059742-63059761 Msa0305410:three_prime_UTR 35.0%
ATACAAACTAAACTGACGGA+TGG + chr2_3:63059802-63059821 Msa0305410:three_prime_UTR 35.0%
TTATAACTGGATCACAGAGT+TGG + chr2_3:63059916-63059935 Msa0305410:three_prime_UTR 35.0%
TATAACTGGATCACAGAGTT+GGG + chr2_3:63059917-63059936 Msa0305410:three_prime_UTR 35.0%
ACAAGCGAAGGCTAAAAGTT+TGG + chr2_3:63055836-63055855 Msa0305410:five_prime_UTR 40.0%
CAAGCGAAGGCTAAAAGTTT+GGG + chr2_3:63055837-63055856 Msa0305410:five_prime_UTR 40.0%
TCCGCATAAGTCATGTGATT+TGG - chr2_3:63056172-63056191 None:intergenic 40.0%
! GCGGATTTTTGTCAGTTTTG+TGG + chr2_3:63056187-63056206 Msa0305410:CDS 40.0%
AACACTGTAACGATCTTCCA+TGG - chr2_3:63056260-63056279 None:intergenic 40.0%
!! GGTCCATCTGTTAACTTGTA+AGG - chr2_3:63056468-63056487 None:intergenic 40.0%
! TGTCCGACCCTTACAATTTT+AGG + chr2_3:63056554-63056573 Msa0305410:intron 40.0%
! GTCCGACCCTTACAATTTTA+GGG + chr2_3:63056555-63056574 Msa0305410:intron 40.0%
! TCCGACCCTTACAATTTTAG+GGG + chr2_3:63056556-63056575 Msa0305410:intron 40.0%
ACCCCTAAAATTGTAAGGGT+CGG - chr2_3:63056560-63056579 None:intergenic 40.0%
! TCAGTTGAAGTAGCATTGGA+TGG - chr2_3:63056746-63056765 None:intergenic 40.0%
CTGTTCAGTTGAAGTAGCAT+TGG - chr2_3:63056750-63056769 None:intergenic 40.0%
ATCTGCCCATTTCGAAATAC+AGG - chr2_3:63057356-63057375 None:intergenic 40.0%
GATTCTTCTTGTCCTGTAAG+TGG + chr2_3:63057373-63057392 Msa0305410:intron 40.0%
TTACAGTCAGCTATTGCTCT+CGG - chr2_3:63057457-63057476 None:intergenic 40.0%
TGTACTGTGTGAGCTACTAT+GGG + chr2_3:63057478-63057497 Msa0305410:intron 40.0%
! AGTCCCCTGCTTATATTTTC+AGG + chr2_3:63057629-63057648 Msa0305410:intron 40.0%
ACATATCCAAAGGTTCTCAG+TGG - chr2_3:63057709-63057728 None:intergenic 40.0%
! GCATTGCTATTCCTTAGAAG+TGG + chr2_3:63057928-63057947 Msa0305410:CDS 40.0%
ACGCTTAGTTTCCACTTCTA+AGG - chr2_3:63057942-63057961 None:intergenic 40.0%
!!! TTTTTTTTTGGTAGTGGCCG+GGG + chr2_3:63058176-63058195 Msa0305410:intron 40.0%
TTCCAAAATTTCCTCCTGTC+TGG + chr2_3:63058434-63058453 Msa0305410:intron 40.0%
! TACCAGACAGGAGGAAATTT+TGG - chr2_3:63058439-63058458 None:intergenic 40.0%
AATTTCCGTAGCAGTTCAGA+AGG + chr2_3:63058543-63058562 Msa0305410:CDS 40.0%
! AGAGAAGAAGTTTCTGGATG+AGG + chr2_3:63058618-63058637 Msa0305410:CDS 40.0%
GGTAAGTTGTAAGTCATGCT+TGG + chr2_3:63058639-63058658 Msa0305410:intron 40.0%
TCCAGATGTTTGCAAACTGA+TGG + chr2_3:63059110-63059129 Msa0305410:intron 40.0%
CCAGATGTTTGCAAACTGAT+GGG + chr2_3:63059111-63059130 Msa0305410:intron 40.0%
!! CAGTATTCACCTGCTTTTCT+AGG - chr2_3:63059196-63059215 None:intergenic 40.0%
TGTACAGCTTAGTAACCTCA+TGG + chr2_3:63059345-63059364 Msa0305410:intron 40.0%
! TAACCTCATGGTTTGTCTTG+AGG + chr2_3:63059357-63059376 Msa0305410:CDS 40.0%
! AACCTCATGGTTTGTCTTGA+GGG + chr2_3:63059358-63059377 Msa0305410:CDS 40.0%
CATTTGCATTTGACAATGGC+GGG - chr2_3:63059402-63059421 None:intergenic 40.0%
! TAAGAGCTACAAGTTGACTG+AGG - chr2_3:63059456-63059475 None:intergenic 40.0%
AGTCAACTTGTAGCTCTTAC+TGG + chr2_3:63059457-63059476 Msa0305410:three_prime_UTR 40.0%
GTCAACTTGTAGCTCTTACT+GGG + chr2_3:63059458-63059477 Msa0305410:three_prime_UTR 40.0%
TCTTACTGGGAAGAAAAGCA+TGG + chr2_3:63059471-63059490 Msa0305410:three_prime_UTR 40.0%
AGACTTTGTTGGGAGTTGAA+CGG + chr2_3:63059516-63059535 Msa0305410:three_prime_UTR 40.0%
TGCTAGTTCGAGGGAAAAAT+AGG + chr2_3:63059579-63059598 Msa0305410:three_prime_UTR 40.0%
ATAGGTAAAGGGAAAGGCTT+TGG + chr2_3:63059597-63059616 Msa0305410:three_prime_UTR 40.0%
!! CTTCTAAACAAGCACTGGTT+AGG + chr2_3:63059747-63059766 Msa0305410:three_prime_UTR 40.0%
TGTAAGTATAACAGTGGTGC+AGG - chr2_3:63059777-63059796 None:intergenic 40.0%
CGCGAGTTTCTTCGATTCTA+GGG - chr2_3:63055989-63056008 None:intergenic 45.0%
CCTAGAATCGAAGAAACTCG+CGG + chr2_3:63055987-63056006 Msa0305410:CDS 45.0%
! AAGAGAAGGAGGGGTTTGTT+CGG - chr2_3:63056030-63056049 None:intergenic 45.0%
! AAACCACTGGCGTGTGTTTT+GGG + chr2_3:63056142-63056161 Msa0305410:CDS 45.0%
! TCGACGTTTTTCGTCTCTAG+AGG + chr2_3:63056336-63056355 Msa0305410:CDS 45.0%
TGCAATGTACCAAGGCAAAC+TGG - chr2_3:63056782-63056801 None:intergenic 45.0%
AAGGGACATGCAATGTACCA+AGG - chr2_3:63056790-63056809 None:intergenic 45.0%
!!! ATGTCCCTTTTTTCCGCCTT+AGG + chr2_3:63056801-63056820 Msa0305410:intron 45.0%
AAGGCCTAAGGCGGAAAAAA+GGG - chr2_3:63056808-63056827 None:intergenic 45.0%
TAAGGCCTAAGGCGGAAAAA+AGG - chr2_3:63056809-63056828 None:intergenic 45.0%
GTAGTACATAAGGCCTAAGG+CGG - chr2_3:63056817-63056836 None:intergenic 45.0%
GCTGTAGTACATAAGGCCTA+AGG - chr2_3:63056820-63056839 None:intergenic 45.0%
CGATTAGATCAAGACACGAG+TGG + chr2_3:63057292-63057311 Msa0305410:CDS 45.0%
TACAGTCAGCTATTGCTCTC+GGG - chr2_3:63057456-63057475 None:intergenic 45.0%
CTGTACTGTGTGAGCTACTA+TGG + chr2_3:63057477-63057496 Msa0305410:intron 45.0%
GTACTGTGTGAGCTACTATG+GGG + chr2_3:63057479-63057498 Msa0305410:intron 45.0%
TGTGAGCTACTATGGGGATT+GGG + chr2_3:63057485-63057504 Msa0305410:intron 45.0%
TACTGTCAGCTGGGATTTCT+TGG + chr2_3:63057544-63057563 Msa0305410:intron 45.0%
!! CAGCTTGTTGTTGGCAATAG+CGG - chr2_3:63057659-63057678 None:intergenic 45.0%
GTCAAACCACTGAGAACCTT+TGG + chr2_3:63057700-63057719 Msa0305410:CDS 45.0%
!! ATATGTGGGTTTGTTGGCTG+TGG + chr2_3:63057732-63057751 Msa0305410:CDS 45.0%
AAGTGGAAACTAAGCGTGTC+TGG + chr2_3:63057945-63057964 Msa0305410:CDS 45.0%
AGTGGAAACTAAGCGTGTCT+GGG + chr2_3:63057946-63057965 Msa0305410:CDS 45.0%
! AAGCGTGTCTGGGATTATGT+CGG + chr2_3:63057956-63057975 Msa0305410:CDS 45.0%
TGGAGATAATGCCATGAGAG+AGG + chr2_3:63058072-63058091 Msa0305410:CDS 45.0%
CCCATCAGTTTGCAAACATC+TGG - chr2_3:63059114-63059133 None:intergenic 45.0%
GCTGACTACTGATAGGGTAA+CGG + chr2_3:63059169-63059188 Msa0305410:CDS 45.0%
! TCATGGTTTGTCTTGAGGGT+GGG + chr2_3:63059362-63059381 Msa0305410:CDS 45.0%
GACTTTGTTGGGAGTTGAAC+GGG + chr2_3:63059517-63059536 Msa0305410:three_prime_UTR 45.0%
! TTTTTCCCTCGAACTAGCAG+TGG - chr2_3:63059578-63059597 None:intergenic 45.0%
GCTCGCAAACAAACAAGGAA+TGG + chr2_3:63059647-63059666 Msa0305410:three_prime_UTR 45.0%
CCGCGAGTTTCTTCGATTCT+AGG - chr2_3:63055990-63056009 None:intergenic 50.0%
! AGAGAAGGAGGGGTTTGTTC+GGG - chr2_3:63056029-63056048 None:intergenic 50.0%
ACAAACCCCTCCTTCTCTTC+CGG + chr2_3:63056031-63056050 Msa0305410:CDS 50.0%
AGGTTACCGGAAGAGAAGGA+GGG - chr2_3:63056040-63056059 None:intergenic 50.0%
TTGGAGGTTACCGGAAGAGA+AGG - chr2_3:63056044-63056063 None:intergenic 50.0%
!! TTAGGTTGGACGGAAACCAC+TGG + chr2_3:63056129-63056148 Msa0305410:intron 50.0%
! GAAACCACTGGCGTGTGTTT+TGG + chr2_3:63056141-63056160 Msa0305410:CDS 50.0%
CCAAGGCAAACTGGACATGT+AGG - chr2_3:63056773-63056792 None:intergenic 50.0%
CCTACATGTCCAGTTTGCCT+TGG + chr2_3:63056770-63056789 Msa0305410:CDS 50.0%
GTGTGAGCTACTATGGGGAT+TGG + chr2_3:63057484-63057503 Msa0305410:intron 50.0%
GTGAGCTACTATGGGGATTG+GGG + chr2_3:63057486-63057505 Msa0305410:intron 50.0%
TACTATGGGGATTGGGGTGT+CGG + chr2_3:63057492-63057511 Msa0305410:intron 50.0%
! GAGGGCATGCCATAATACAC+TGG + chr2_3:63057894-63057913 Msa0305410:CDS 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG - chr2_3:63058238-63058257 None:intergenic 50.0%
GACAGCCTTCTGAACTGCTA+CGG - chr2_3:63058551-63058570 None:intergenic 50.0%
!! GGTAACGGACCTAGAAAAGC+AGG + chr2_3:63059184-63059203 Msa0305410:CDS 50.0%
!!! TCCTGGAAGGGGTTTTGTTG+CGG + chr2_3:63059243-63059262 Msa0305410:intron 50.0%
CACCCTCAAGACAAACCATG+AGG - chr2_3:63059363-63059382 None:intergenic 50.0%
! CTCATGGTTTGTCTTGAGGG+TGG + chr2_3:63059361-63059380 Msa0305410:CDS 50.0%
TTGTCTTGAGGGTGGGAAGA+CGG + chr2_3:63059369-63059388 Msa0305410:CDS 50.0%
TGTTGGGAGTTGAACGGGAA+AGG + chr2_3:63059522-63059541 Msa0305410:three_prime_UTR 50.0%
GAGTTGAACGGGAAAGGAGA+GGG + chr2_3:63059528-63059547 Msa0305410:three_prime_UTR 50.0%
AAAGGAGAGGGACATGAACG+AGG + chr2_3:63059540-63059559 Msa0305410:three_prime_UTR 50.0%
AGAGGGACATGAACGAGGTA+AGG + chr2_3:63059545-63059564 Msa0305410:three_prime_UTR 50.0%
AACACACCACTGCTAGTTCG+AGG + chr2_3:63059569-63059588 Msa0305410:three_prime_UTR 50.0%
ACACACCACTGCTAGTTCGA+GGG + chr2_3:63059570-63059589 Msa0305410:three_prime_UTR 50.0%
GTTCGGGGAAGACATGCATG+AGG - chr2_3:63056013-63056032 None:intergenic 55.0%
! GAGAAGGAGGGGTTTGTTCG+GGG - chr2_3:63056028-63056047 None:intergenic 55.0%
GGTTACCGGAAGAGAAGGAG+GGG - chr2_3:63056039-63056058 None:intergenic 55.0%
GAGGTTACCGGAAGAGAAGG+AGG - chr2_3:63056041-63056060 None:intergenic 55.0%
ACTCCCAAAACACACGCCAG+TGG - chr2_3:63056148-63056167 None:intergenic 55.0%
GAGGCAGCAGAACCACTTAC+AGG - chr2_3:63057388-63057407 None:intergenic 55.0%
!! GTGGGTTTGTTGGCTGTGGA+AGG + chr2_3:63057736-63057755 Msa0305410:CDS 55.0%
CACTGTGTGCATGCAGACAG+TGG + chr2_3:63058043-63058062 Msa0305410:CDS 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr2_3:63058242-63058261 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr2_3:63058239-63058258 Msa0305410:intron 55.0%
!!! CCTGGAAGGGGTTTTGTTGC+GGG + chr2_3:63059244-63059263 Msa0305410:intron 55.0%
!!! CTGGAAGGGGTTTTGTTGCG+GGG + chr2_3:63059245-63059264 Msa0305410:intron 55.0%
GGAGTTGAACGGGAAAGGAG+AGG + chr2_3:63059527-63059546 Msa0305410:three_prime_UTR 55.0%
TTGAGCGCAGCGTAGCGATG+TGG + chr2_3:63055880-63055899 Msa0305410:exon 60.0%
CATGCAGACAGTGGCAGCTG+TGG + chr2_3:63058052-63058071 Msa0305410:CDS 60.0%
AAGGTCCGGGGTTCAAACCC+CGG - chr2_3:63058196-63058215 None:intergenic 60.0%
CCCGCAACAAAACCCCTTCC+AGG - chr2_3:63059247-63059266 None:intergenic 60.0%
!!! GGGTTTTGTTGCGGGGTGCA+GGG + chr2_3:63059252-63059271 Msa0305410:intron 60.0%
!!! GGTTTTGTTGCGGGGTGCAG+GGG + chr2_3:63059253-63059272 Msa0305410:intron 60.0%
AGTGGCCGGGGTTTGAACCC+CGG + chr2_3:63058188-63058207 Msa0305410:intron 65.0%
!!! GGGGTTTTGTTGCGGGGTGC+AGG + chr2_3:63059251-63059270 Msa0305410:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 63055827 63060001 63055827 ID=Msa0305410;Name=Msa0305410
chr2_3 mRNA 63055827 63060001 63055827 ID=Msa0305410-mRNA-1;Parent=Msa0305410;Name=Msa0305410-mRNA-1;_AED=0.08;_eAED=0.08;_QI=70|1|1|1|1|1|11|563|446
chr2_3 exon 63055827 63056052 63055827 ID=Msa0305410-mRNA-1:exon:21008;Parent=Msa0305410-mRNA-1
chr2_3 exon 63056133 63056357 63056133 ID=Msa0305410-mRNA-1:exon:21009;Parent=Msa0305410-mRNA-1
chr2_3 exon 63056677 63056791 63056677 ID=Msa0305410-mRNA-1:exon:21010;Parent=Msa0305410-mRNA-1
chr2_3 exon 63057290 63057387 63057290 ID=Msa0305410-mRNA-1:exon:21011;Parent=Msa0305410-mRNA-1
chr2_3 exon 63057651 63057757 63057651 ID=Msa0305410-mRNA-1:exon:21012;Parent=Msa0305410-mRNA-1
chr2_3 exon 63057886 63058120 63057886 ID=Msa0305410-mRNA-1:exon:21013;Parent=Msa0305410-mRNA-1
chr2_3 exon 63058346 63058399 63058346 ID=Msa0305410-mRNA-1:exon:21014;Parent=Msa0305410-mRNA-1
chr2_3 exon 63058496 63058639 63058496 ID=Msa0305410-mRNA-1:exon:21015;Parent=Msa0305410-mRNA-1
chr2_3 exon 63058872 63058936 63058872 ID=Msa0305410-mRNA-1:exon:21016;Parent=Msa0305410-mRNA-1
chr2_3 exon 63059151 63059205 63059151 ID=Msa0305410-mRNA-1:exon:21017;Parent=Msa0305410-mRNA-1
chr2_3 exon 63059352 63060001 63059352 ID=Msa0305410-mRNA-1:exon:21018;Parent=Msa0305410-mRNA-1
chr2_3 five_prime_UTR 63055827 63055896 63055827 ID=Msa0305410-mRNA-1:five_prime_utr;Parent=Msa0305410-mRNA-1
chr2_3 CDS 63055897 63056052 63055897 ID=Msa0305410-mRNA-1:cds;Parent=Msa0305410-mRNA-1
chr2_3 CDS 63056133 63056357 63056133 ID=Msa0305410-mRNA-1:cds;Parent=Msa0305410-mRNA-1
chr2_3 CDS 63056677 63056791 63056677 ID=Msa0305410-mRNA-1:cds;Parent=Msa0305410-mRNA-1
chr2_3 CDS 63057290 63057387 63057290 ID=Msa0305410-mRNA-1:cds;Parent=Msa0305410-mRNA-1
chr2_3 CDS 63057651 63057757 63057651 ID=Msa0305410-mRNA-1:cds;Parent=Msa0305410-mRNA-1
chr2_3 CDS 63057886 63058120 63057886 ID=Msa0305410-mRNA-1:cds;Parent=Msa0305410-mRNA-1
chr2_3 CDS 63058346 63058399 63058346 ID=Msa0305410-mRNA-1:cds;Parent=Msa0305410-mRNA-1
chr2_3 CDS 63058496 63058639 63058496 ID=Msa0305410-mRNA-1:cds;Parent=Msa0305410-mRNA-1
chr2_3 CDS 63058872 63058936 63058872 ID=Msa0305410-mRNA-1:cds;Parent=Msa0305410-mRNA-1
chr2_3 CDS 63059151 63059205 63059151 ID=Msa0305410-mRNA-1:cds;Parent=Msa0305410-mRNA-1
chr2_3 CDS 63059352 63059438 63059352 ID=Msa0305410-mRNA-1:cds;Parent=Msa0305410-mRNA-1
chr2_3 three_prime_UTR 63059439 63060001 63059439 ID=Msa0305410-mRNA-1:three_prime_utr;Parent=Msa0305410-mRNA-1
Gene Sequence

>Msa0305410

ATGTGGAGTTCAAGCAGAGTCGTCTCCGAAGAAGAACAAACTGAATCTTCTTCTTTCTCAACTTCTCTTTTCAATTTCTCTTCTGGTAACCCTAGAATCGAAGAAACTCGCGGCCTCATGCATGTCTTCCCCGAACAAACCCCTCCTTCTCTTCCGGTTGGACGGAAACCACTGGCGTGTGTTTTGGGAGTACCAAATCACATGACTTATGCGGATTTTTGTCAGTTTTGTGGTTCTTTTATTCAGCATATTCTTGAAATGCGTATTGTTAGAATGGAATCCATGGAAGATCGTTACAGTGTTTTGATTCGATTCGATGAACAAGATTCTACGGATGCTTTCTATACTCATTACAATGGTCGACGTTTTTCGTCTCTAGAGGTTGAGGTGTGCCGTGTTGTTTTCACTTTAGATGTGCAGTATACTGGGTCAATTGAACACGCACAACCATCCAATGCTACTTCAACTGAACAGCCTACATGTCCAGTTTGCCTTGAGCGATTAGATCAAGACACGAGTGGAATTCTTACAACCATATGCAATCATTCTTTCCATTGCTCCTGTATTTCGAAATGGGCAGATTCTTCTTGTCCTGTATGCCGCTATTGCCAACAACAAGCTGAAAATTCTATATGTTTCGTTTGTCAAACCACTGAGAACCTTTGGATATGTGTTATATGTGGGTTTGTTGGCTGTGGAAGATATAAAGGAGGGCATGCCATAATACACTGGAAAGAAACGCAGCATTGCTATTCCTTAGAAGTGGAAACTAAGCGTGTCTGGGATTATGTCGGAGACAACTATGTCCATAGACTTATTCAGTCCAAAACTGATGGGAAGTTAGTTGAGCTGAACTCTCACTGTGTGCATGCAGACAGTGGCAGCTGTGGAGATAATGCCATGAGAGAGGCTATACTTAATAGTAAAGTTGAAGCGATTGTCAATGAATACAATGAATTGCTTGCTACACAACTTGAAAACCAAAAATTGTATTTTGAATCCTTATTACAACAAGTAGAACAAGAAACTGAAGGAAAAATTTCCGTAGCAGTTCAGAAGGCTGTCAGTCTCAAACAGCATAAGATTCAGGCGAAGATCGATCGATGTAACAAAGAGAAGAAGTTTCTGGATGAGCTTAATGACAATCTTTTGAAAAACGAGGAGATCTGGAAAGCCAAGTTACTTGAGATTGAAGAGAGGGAGAAAAAGGCTTTAAAGCTGACTACTGATAGGGTAACGGACCTAGAAAAGCAGCTTAGTAACCTCATGGTTTGTCTTGAGGGTGGGAAGACGGAAGAACACCCGCCATTGTCAAATGCAAATGATGGAACTGTCTCTTGA

Protein sequence

>Msa0305410

MWSSSRVVSEEEQTESSSFSTSLFNFSSGNPRIEETRGLMHVFPEQTPPSLPVGRKPLACVLGVPNHMTYADFCQFCGSFIQHILEMRIVRMESMEDRYSVLIRFDEQDSTDAFYTHYNGRRFSSLEVEVCRVVFTLDVQYTGSIEHAQPSNATSTEQPTCPVCLERLDQDTSGILTTICNHSFHCSCISKWADSSCPVCRYCQQQAENSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVETKRVWDYVGDNYVHRLIQSKTDGKLVELNSHCVHADSGSCGDNAMREAILNSKVEAIVNEYNELLATQLENQKLYFESLLQQVEQETEGKISVAVQKAVSLKQHKIQAKIDRCNKEKKFLDELNDNLLKNEEIWKAKLLEIEEREKKALKLTTDRVTDLEKQLSNLMVCLEGGKTEEHPPLSNANDGTVS*