Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017058.t1 | XP_003617373.1 | 92.6 | 473 | 35 | 0 | 1 | 473 | 1 | 473 | 5.30E-258 | 899.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017058.t1 | Q8GSM7 | 25.4 | 465 | 291 | 16 | 10 | 456 | 3 | 429 | 2.1e-29 | 131.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017058.t1 | G7K3A7 | 92.6 | 473 | 35 | 0 | 1 | 473 | 1 | 473 | 3.8e-258 | 899.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017058.t1 | MTR_5g090880 | 93.658 | 473 | 30 | 0 | 1 | 473 | 1 | 473 | 0.0 | 904 |
MS.gene017058.t1 | MTR_5g090830 | 80.591 | 474 | 88 | 3 | 1 | 473 | 1 | 471 | 0.0 | 798 |
MS.gene017058.t1 | MTR_5g090810 | 79.114 | 474 | 95 | 3 | 1 | 473 | 1 | 471 | 0.0 | 785 |
MS.gene017058.t1 | MTR_3g450710 | 63.466 | 479 | 156 | 7 | 1 | 471 | 1 | 468 | 0.0 | 590 |
MS.gene017058.t1 | MTR_3g450690 | 61.667 | 480 | 167 | 6 | 1 | 471 | 1 | 472 | 0.0 | 585 |
MS.gene017058.t1 | MTR_5g026320 | 34.968 | 469 | 274 | 13 | 7 | 471 | 15 | 456 | 7.25e-73 | 237 |
MS.gene017058.t1 | MTR_8g075610 | 26.269 | 453 | 282 | 16 | 17 | 456 | 1 | 414 | 3.46e-37 | 141 |
MS.gene017058.t1 | MTR_4g007540 | 27.430 | 463 | 274 | 18 | 10 | 452 | 3 | 423 | 6.01e-37 | 141 |
MS.gene017058.t1 | MTR_2g064495 | 26.566 | 463 | 285 | 17 | 10 | 456 | 3 | 426 | 2.93e-36 | 139 |
MS.gene017058.t1 | MTR_2g105330 | 26.566 | 463 | 285 | 17 | 10 | 456 | 3 | 426 | 5.45e-36 | 138 |
MS.gene017058.t1 | MTR_8g096530 | 26.802 | 444 | 265 | 18 | 31 | 459 | 28 | 426 | 1.23e-29 | 120 |
MS.gene017058.t1 | MTR_3g049150 | 24.879 | 414 | 273 | 14 | 60 | 456 | 48 | 440 | 2.39e-27 | 114 |
MS.gene017058.t1 | MTR_3g098980 | 26.650 | 394 | 240 | 14 | 31 | 414 | 35 | 389 | 1.00e-26 | 112 |
MS.gene017058.t1 | MTR_7g027175 | 26.241 | 423 | 263 | 17 | 4 | 415 | 9 | 393 | 3.25e-26 | 110 |
MS.gene017058.t1 | MTR_1g040215 | 26.316 | 399 | 237 | 14 | 64 | 437 | 61 | 427 | 3.63e-26 | 111 |
MS.gene017058.t1 | MTR_7g114560 | 24.812 | 399 | 256 | 11 | 64 | 450 | 62 | 428 | 4.39e-26 | 110 |
MS.gene017058.t1 | MTR_7g085990 | 27.013 | 385 | 229 | 16 | 61 | 414 | 49 | 412 | 1.39e-25 | 109 |
MS.gene017058.t1 | MTR_4g127650 | 24.017 | 458 | 300 | 13 | 28 | 466 | 28 | 456 | 3.14e-25 | 108 |
MS.gene017058.t1 | MTR_7g086000 | 26.933 | 375 | 220 | 15 | 67 | 413 | 60 | 408 | 3.37e-25 | 108 |
MS.gene017058.t1 | MTR_7g114550 | 25.564 | 399 | 247 | 13 | 67 | 450 | 65 | 428 | 4.80e-25 | 107 |
MS.gene017058.t1 | MTR_4g097090 | 25.219 | 456 | 298 | 16 | 28 | 466 | 27 | 456 | 2.90e-24 | 105 |
MS.gene017058.t1 | MTR_1g040175 | 24.755 | 408 | 244 | 13 | 64 | 443 | 61 | 433 | 4.21e-24 | 105 |
MS.gene017058.t1 | MTR_5g076700 | 26.173 | 405 | 238 | 17 | 67 | 450 | 65 | 429 | 1.10e-23 | 103 |
MS.gene017058.t1 | MTR_7g114490 | 24.510 | 408 | 264 | 12 | 64 | 459 | 62 | 437 | 3.81e-23 | 102 |
MS.gene017058.t1 | MTR_7g114470 | 25.505 | 396 | 242 | 15 | 64 | 435 | 63 | 429 | 5.93e-23 | 101 |
MS.gene017058.t1 | MTR_1g081660 | 24.876 | 402 | 255 | 17 | 64 | 452 | 70 | 437 | 8.37e-23 | 101 |
MS.gene017058.t1 | MTR_7g085930 | 27.154 | 383 | 231 | 16 | 61 | 414 | 53 | 416 | 7.84e-22 | 98.2 |
MS.gene017058.t1 | MTR_7g114520 | 25.558 | 403 | 254 | 15 | 64 | 452 | 63 | 433 | 2.36e-21 | 96.7 |
MS.gene017058.t1 | MTR_3g026950 | 24.764 | 424 | 279 | 11 | 10 | 414 | 2 | 404 | 2.90e-21 | 96.7 |
MS.gene017058.t1 | MTR_1g053315 | 23.544 | 412 | 248 | 17 | 29 | 414 | 40 | 410 | 1.29e-18 | 88.6 |
MS.gene017058.t1 | MTR_3g465990 | 25.000 | 412 | 254 | 15 | 49 | 440 | 50 | 426 | 4.44e-18 | 87.0 |
MS.gene017058.t1 | MTR_1g040320 | 22.549 | 408 | 217 | 13 | 64 | 443 | 61 | 397 | 1.57e-17 | 85.1 |
MS.gene017058.t1 | MTR_3g465980 | 25.519 | 337 | 211 | 10 | 49 | 369 | 50 | 362 | 6.39e-17 | 83.2 |
MS.gene017058.t1 | MTR_3g086020 | 24.408 | 422 | 257 | 20 | 6 | 417 | 1 | 370 | 5.89e-16 | 80.1 |
MS.gene017058.t1 | MTR_1g040315 | 26.549 | 226 | 137 | 6 | 64 | 278 | 61 | 268 | 1.24e-15 | 79.0 |
MS.gene017058.t1 | MTR_7g084910 | 24.892 | 462 | 257 | 21 | 7 | 435 | 14 | 418 | 1.96e-15 | 78.6 |
MS.gene017058.t1 | MTR_8g467580 | 23.624 | 436 | 250 | 20 | 10 | 414 | 3 | 386 | 1.26e-14 | 76.3 |
MS.gene017058.t1 | MTR_3g112180 | 24.747 | 396 | 223 | 15 | 67 | 429 | 61 | 414 | 1.38e-14 | 76.3 |
MS.gene017058.t1 | MTR_3g070170 | 22.326 | 430 | 237 | 15 | 60 | 439 | 59 | 441 | 1.43e-14 | 76.3 |
MS.gene017058.t1 | MTR_3g088420 | 24.263 | 441 | 263 | 17 | 36 | 455 | 32 | 422 | 1.60e-14 | 75.9 |
MS.gene017058.t1 | MTR_8g079980 | 23.288 | 365 | 221 | 11 | 67 | 414 | 59 | 381 | 1.63e-14 | 75.9 |
MS.gene017058.t1 | MTR_4g055170 | 22.983 | 409 | 254 | 13 | 67 | 449 | 69 | 442 | 2.75e-14 | 75.1 |
MS.gene017058.t1 | MTR_3g101900 | 23.360 | 381 | 234 | 13 | 67 | 425 | 66 | 410 | 4.54e-14 | 74.3 |
MS.gene017058.t1 | MTR_2g015430 | 22.716 | 405 | 269 | 16 | 21 | 415 | 15 | 385 | 7.82e-14 | 73.9 |
MS.gene017058.t1 | MTR_7g056087 | 22.366 | 465 | 301 | 17 | 10 | 453 | 4 | 429 | 1.13e-13 | 73.2 |
MS.gene017058.t1 | MTR_3g101930 | 24.138 | 377 | 222 | 14 | 62 | 412 | 65 | 403 | 3.44e-13 | 71.6 |
MS.gene017058.t1 | MTR_4g022720 | 25.068 | 367 | 222 | 13 | 67 | 414 | 55 | 387 | 9.85e-13 | 70.1 |
MS.gene017058.t1 | MTR_8g041770 | 23.778 | 450 | 262 | 19 | 26 | 452 | 25 | 416 | 6.00e-12 | 67.8 |
MS.gene017058.t1 | MTR_4g022290 | 23.545 | 378 | 216 | 16 | 67 | 414 | 60 | 394 | 1.36e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene017058.t1 | AT1G32910 | 55.011 | 469 | 185 | 9 | 8 | 471 | 11 | 458 | 4.41e-161 | 464 |
MS.gene017058.t1 | AT1G78990 | 53.846 | 468 | 187 | 9 | 8 | 471 | 11 | 453 | 8.28e-161 | 463 |
MS.gene017058.t1 | AT5G16410 | 50.422 | 474 | 197 | 12 | 8 | 471 | 34 | 479 | 5.54e-149 | 434 |
MS.gene017058.t1 | AT1G31490 | 35.430 | 477 | 255 | 15 | 8 | 471 | 4 | 440 | 6.50e-75 | 242 |
MS.gene017058.t1 | AT5G48930 | 26.395 | 466 | 283 | 16 | 10 | 456 | 3 | 427 | 1.09e-36 | 140 |
MS.gene017058.t1 | AT5G41040 | 26.768 | 396 | 242 | 14 | 31 | 415 | 38 | 396 | 4.07e-29 | 119 |
MS.gene017058.t1 | AT5G41040 | 26.768 | 396 | 242 | 14 | 31 | 415 | 54 | 412 | 4.99e-29 | 119 |
MS.gene017058.t1 | AT5G57840 | 25.270 | 463 | 288 | 15 | 10 | 452 | 3 | 427 | 1.12e-26 | 112 |
MS.gene017058.t1 | AT3G03480 | 25.926 | 405 | 231 | 15 | 64 | 437 | 70 | 436 | 1.01e-23 | 103 |
MS.gene017058.t1 | AT3G48720 | 25.107 | 466 | 295 | 16 | 3 | 456 | 2 | 425 | 1.53e-23 | 103 |
MS.gene017058.t1 | AT5G63560 | 25.446 | 448 | 254 | 17 | 8 | 425 | 5 | 402 | 2.22e-23 | 102 |
MS.gene017058.t1 | AT5G17540 | 25.216 | 464 | 269 | 20 | 4 | 440 | 3 | 415 | 4.88e-23 | 102 |
MS.gene017058.t1 | AT3G26040 | 24.645 | 422 | 257 | 16 | 10 | 414 | 3 | 380 | 6.91e-23 | 101 |
MS.gene017058.t1 | AT1G28680 | 27.228 | 404 | 243 | 20 | 26 | 415 | 22 | 388 | 6.83e-21 | 95.5 |
MS.gene017058.t1 | AT1G24430 | 26.253 | 419 | 248 | 18 | 10 | 414 | 5 | 376 | 1.70e-20 | 94.0 |
MS.gene017058.t1 | AT1G65450 | 25.556 | 360 | 224 | 13 | 67 | 413 | 72 | 400 | 2.24e-20 | 94.0 |
MS.gene017058.t1 | AT2G40230 | 25.310 | 403 | 246 | 15 | 62 | 448 | 54 | 417 | 7.14e-20 | 92.0 |
MS.gene017058.t1 | AT1G27620 | 23.134 | 402 | 260 | 14 | 67 | 456 | 58 | 422 | 7.30e-20 | 92.4 |
MS.gene017058.t1 | AT2G19070 | 23.904 | 456 | 304 | 16 | 28 | 466 | 22 | 451 | 8.31e-20 | 92.0 |
MS.gene017058.t1 | AT5G67160 | 25.581 | 430 | 246 | 19 | 64 | 473 | 53 | 428 | 2.72e-19 | 90.5 |
MS.gene017058.t1 | AT1G28680 | 27.500 | 360 | 220 | 18 | 26 | 371 | 22 | 354 | 3.94e-18 | 86.7 |
MS.gene017058.t1 | AT3G50280 | 23.861 | 373 | 229 | 13 | 63 | 414 | 55 | 393 | 1.66e-17 | 85.1 |
MS.gene017058.t1 | AT5G47950 | 22.944 | 462 | 283 | 16 | 10 | 456 | 6 | 409 | 8.00e-16 | 79.7 |
MS.gene017058.t1 | AT3G30280 | 24.938 | 405 | 244 | 16 | 27 | 414 | 25 | 386 | 8.66e-16 | 79.7 |
MS.gene017058.t1 | AT4G15390 | 26.408 | 284 | 155 | 11 | 27 | 292 | 27 | 274 | 1.62e-14 | 75.9 |
MS.gene017058.t1 | AT4G15390 | 26.408 | 284 | 155 | 11 | 27 | 292 | 27 | 274 | 1.62e-14 | 75.9 |
MS.gene017058.t1 | AT5G67150 | 24.129 | 373 | 229 | 15 | 63 | 414 | 57 | 396 | 2.19e-14 | 75.5 |
MS.gene017058.t1 | AT1G24420 | 24.186 | 430 | 254 | 14 | 6 | 414 | 1 | 379 | 1.64e-13 | 72.8 |
MS.gene017058.t1 | AT1G24420 | 24.186 | 430 | 254 | 14 | 6 | 414 | 1 | 379 | 1.64e-13 | 72.8 |
MS.gene017058.t1 | AT5G47980 | 21.962 | 469 | 293 | 19 | 6 | 450 | 1 | 420 | 2.07e-13 | 72.4 |
MS.gene017058.t1 | AT5G23970 | 23.182 | 440 | 281 | 16 | 10 | 439 | 3 | 395 | 2.32e-13 | 72.4 |
MS.gene017058.t1 | AT2G25150 | 23.786 | 412 | 271 | 13 | 16 | 414 | 19 | 400 | 4.43e-13 | 71.6 |
MS.gene017058.t1 | AT3G50300 | 23.035 | 369 | 235 | 14 | 64 | 414 | 56 | 393 | 6.46e-12 | 67.8 |
MS.gene017058.t1 | AT5G42830 | 22.667 | 375 | 237 | 15 | 61 | 415 | 58 | 399 | 8.78e-12 | 67.4 |
MS.gene017058.t1 | AT5G07860 | 22.105 | 380 | 223 | 13 | 62 | 415 | 67 | 399 | 2.35e-11 | 66.2 |
Find 127 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGAGTCAAAGGTAGATTT+TGG | 0.197134 | 5.1:-72221710 | MS.gene017058:CDS |
GGATGGAAGGTGGGTGTCTT+GGG | 0.229374 | 5.1:+72222317 | None:intergenic |
TGCAACAACATTTCCACTAT+TGG | 0.271768 | 5.1:+72222057 | None:intergenic |
GAGTTTATGAGTTCGTATTT+TGG | 0.286533 | 5.1:-72221974 | MS.gene017058:CDS |
ACACCCCACAATAGTGTTAT+TGG | 0.294608 | 5.1:+72222898 | None:intergenic |
GTTTCTTATTACGTCTTTGC+TGG | 0.306691 | 5.1:-72222848 | MS.gene017058:CDS |
TCTGAATCGGGCTTGGGTTC+AGG | 0.320014 | 5.1:+72222244 | None:intergenic |
GAAGAGCATCGACCGGTTCC+AGG | 0.324397 | 5.1:-72221809 | MS.gene017058:CDS |
TGGATGGAAGGTGGGTGTCT+TGG | 0.324811 | 5.1:+72222316 | None:intergenic |
TAAGGAATACTTGCACTTCA+TGG | 0.338830 | 5.1:-72221570 | MS.gene017058:CDS |
TTTAATATCTGAATCGGGCT+TGG | 0.341597 | 5.1:+72222237 | None:intergenic |
ATTTCTTGGGACTAATTGAT+TGG | 0.344863 | 5.1:-72221835 | MS.gene017058:CDS |
AGGATTTATTGCGGAGTTCC+TGG | 0.347311 | 5.1:-72221779 | MS.gene017058:CDS |
CAAACATGTTTCTTGTATCA+TGG | 0.356132 | 5.1:-72222417 | MS.gene017058:CDS |
TTCTGCTTTCTTGTGGAAGA+TGG | 0.357240 | 5.1:-72222098 | MS.gene017058:CDS |
CCGACATTTGTGGTGTCTTC+CGG | 0.359537 | 5.1:-72221743 | MS.gene017058:CDS |
TGCCAATGCCTAGTCCTAAA+AGG | 0.369732 | 5.1:-72221625 | MS.gene017058:CDS |
ATGAGATTGGTCTAAAGAAA+TGG | 0.371643 | 5.1:+72221534 | None:intergenic |
AAGAACACACCAATACTAAC+AGG | 0.372400 | 5.1:+72222956 | None:intergenic |
AAGAAACATGTTTGTAGAAT+AGG | 0.374201 | 5.1:+72222426 | None:intergenic |
GGACACGGAAGAACATTTCT+TGG | 0.384547 | 5.1:-72221849 | MS.gene017058:CDS |
TTCCCTTCAATGGTTTCCTC+TGG | 0.385000 | 5.1:+72222713 | None:intergenic |
TGGAACAAGCTTCCCTTCAA+TGG | 0.386738 | 5.1:+72222703 | None:intergenic |
ACATGGTGTGCTTGCTGTTC+AGG | 0.388373 | 5.1:-72222672 | MS.gene017058:intron |
TTAATATCTGAATCGGGCTT+GGG | 0.393064 | 5.1:+72222238 | None:intergenic |
ATTCCTTGTGGTGGTGATGC+TGG | 0.393172 | 5.1:-72221656 | MS.gene017058:CDS |
TTACGTCTTTGCTGGTGAAA+TGG | 0.396605 | 5.1:-72222840 | MS.gene017058:CDS |
GTGGGTGTCTTGGGGTCAAA+AGG | 0.407163 | 5.1:+72222326 | None:intergenic |
CAATAAATCCTTGCCAGCCC+TGG | 0.423385 | 5.1:+72221791 | None:intergenic |
CGCTCTGTAACCCAACATAA+TGG | 0.424141 | 5.1:+72221896 | None:intergenic |
TGAGATTGGTCTAAAGAAAT+GGG | 0.424402 | 5.1:+72221535 | None:intergenic |
ATGAATCCTATGATTACTAT+TGG | 0.425230 | 5.1:-72222926 | MS.gene017058:CDS |
CTAATCACTAAAATGAGTAT+TGG | 0.430164 | 5.1:-72223085 | None:intergenic |
CCAAAATCTACCTTTGACTC+TGG | 0.435822 | 5.1:+72221710 | None:intergenic |
TCGGGCTTGGGTTCAGGTGG+AGG | 0.436924 | 5.1:+72222250 | None:intergenic |
GCATCGACCGGTTCCAGGGC+TGG | 0.439356 | 5.1:-72221804 | MS.gene017058:CDS |
ATCCTTGCCAGCCCTGGAAC+CGG | 0.444779 | 5.1:+72221797 | None:intergenic |
TGTTGACAAGCCATTATGTT+GGG | 0.447475 | 5.1:-72221906 | MS.gene017058:CDS |
CCTATGTTCTTGCATTGCCT+TGG | 0.455581 | 5.1:+72223012 | None:intergenic |
GACACGGAAGAACATTTCTT+GGG | 0.462909 | 5.1:-72221848 | MS.gene017058:CDS |
ACCACCAATAACACTATTGT+GGG | 0.470153 | 5.1:-72222902 | MS.gene017058:CDS |
TTTCTTGGGACTAATTGATT+GGG | 0.478579 | 5.1:-72221834 | MS.gene017058:CDS |
TCTATTAATTTACAACTGTA+GGG | 0.479476 | 5.1:+72221935 | None:intergenic |
ATGAAGTGCAAGTATTCCTT+AGG | 0.482803 | 5.1:+72221572 | None:intergenic |
AAACATGTTTCTTGTATCAT+GGG | 0.484767 | 5.1:-72222416 | MS.gene017058:CDS |
ATTTCTTTAGACCAATCTCA+TGG | 0.487418 | 5.1:-72221532 | MS.gene017058:CDS |
GTCCTAAAAGGAATGGTGAT+TGG | 0.487820 | 5.1:-72221613 | MS.gene017058:CDS |
TGACTCTGGAAATCTTTGTC+CGG | 0.488713 | 5.1:+72221724 | None:intergenic |
AGAAGGTAATCCCATGAGAT+TGG | 0.494084 | 5.1:+72221521 | None:intergenic |
TTCTATTAATTTACAACTGT+AGG | 0.494706 | 5.1:+72221934 | None:intergenic |
GACCGGTTCCAGGGCTGGCA+AGG | 0.497114 | 5.1:-72221799 | MS.gene017058:CDS |
CGGTTGTTGCAAAGTAGCTC+AGG | 0.499190 | 5.1:+72222797 | None:intergenic |
GGCTTGGGTTCAGGTGGAGG+AGG | 0.502810 | 5.1:+72222253 | None:intergenic |
TCAGCCGCTTCAACCAATAG+TGG | 0.504854 | 5.1:-72222070 | MS.gene017058:CDS |
GGATCTTATCATATTCCTTG+TGG | 0.513474 | 5.1:-72221668 | MS.gene017058:CDS |
GATGGAAGGTGGGTGTCTTG+GGG | 0.526099 | 5.1:+72222318 | None:intergenic |
CACCACCAATAACACTATTG+TGG | 0.528613 | 5.1:-72222903 | MS.gene017058:CDS |
GTGAAGGATGGATGGAAGGT+GGG | 0.534125 | 5.1:+72222308 | None:intergenic |
GTCATAGAGTGAAGGATGGA+TGG | 0.535942 | 5.1:+72222300 | None:intergenic |
AAGCCAGAGGAAACCATTGA+AGG | 0.538348 | 5.1:-72222716 | MS.gene017058:CDS |
GATCTACATGAATCTTCCTA+AGG | 0.548247 | 5.1:-72221588 | MS.gene017058:CDS |
AGAAACAAGAGCCTCAGCTA+AGG | 0.548714 | 5.1:+72222865 | None:intergenic |
GTCGGTCCATCTGCTCCACC+AGG | 0.550954 | 5.1:+72221761 | None:intergenic |
TGGGTGTCTTGGGGTCAAAA+GGG | 0.554761 | 5.1:+72222327 | None:intergenic |
GTATAATTGTGCAGGCAACT+TGG | 0.557460 | 5.1:-72222504 | MS.gene017058:intron |
GAATCGGGCTTGGGTTCAGG+TGG | 0.560265 | 5.1:+72222247 | None:intergenic |
AGTGAAGGATGGATGGAAGG+TGG | 0.560310 | 5.1:+72222307 | None:intergenic |
CCAAGGCAATGCAAGAACAT+AGG | 0.562331 | 5.1:-72223012 | MS.gene017058:CDS |
GTGGTGCCAATAGTAATCAT+AGG | 0.562421 | 5.1:+72222920 | None:intergenic |
TGGAGGAGGTAGATCCGAGA+TGG | 0.563260 | 5.1:+72222267 | None:intergenic |
AATATGATAAGATCCAACTA+CGG | 0.564107 | 5.1:+72221676 | None:intergenic |
TAGAGTGAAGGATGGATGGA+AGG | 0.564472 | 5.1:+72222304 | None:intergenic |
CAGGCAACTTGGATGAAATG+TGG | 0.566561 | 5.1:-72222493 | MS.gene017058:CDS |
ATTTCCACTATTGGTTGAAG+CGG | 0.566759 | 5.1:+72222066 | None:intergenic |
CTTGGGACTAATTGATTGGG+TGG | 0.567048 | 5.1:-72221831 | MS.gene017058:CDS |
AGACTTGTTATTGCTCGAGC+GGG | 0.569461 | 5.1:+72222384 | None:intergenic |
GGAGTTCCTGGTGGAGCAGA+TGG | 0.571944 | 5.1:-72221767 | MS.gene017058:CDS |
TGTGTTGGCTAGTAACTGCA+TGG | 0.574899 | 5.1:+72222162 | None:intergenic |
TGAAATGGTCACTAACTCCA+TGG | 0.576847 | 5.1:-72222825 | MS.gene017058:CDS |
AGGCAACTTGGATGAAATGT+GGG | 0.579164 | 5.1:-72222492 | MS.gene017058:CDS |
TTGTTGACAAGCCATTATGT+TGG | 0.579826 | 5.1:-72221907 | MS.gene017058:CDS |
TAGTACATGCGACTTATTAG+CGG | 0.580648 | 5.1:+72222208 | None:intergenic |
AGCCAGAGGAAACCATTGAA+GGG | 0.581302 | 5.1:-72222715 | MS.gene017058:CDS |
AAAAGGGACCTCTGAAAACA+AGG | 0.581419 | 5.1:+72222343 | None:intergenic |
AGTACATGCGACTTATTAGC+GGG | 0.583367 | 5.1:+72222209 | None:intergenic |
CCCCACAATAGTGTTATTGG+TGG | 0.583667 | 5.1:+72222901 | None:intergenic |
ACAAAGATTTCCAGAGTCAA+AGG | 0.583703 | 5.1:-72221720 | MS.gene017058:CDS |
TCTTATCATATTCCTTGTGG+TGG | 0.583934 | 5.1:-72221665 | MS.gene017058:CDS |
AAGAGCATCGACCGGTTCCA+GGG | 0.585377 | 5.1:-72221808 | MS.gene017058:CDS |
ATATGATAAGATCCAACTAC+GGG | 0.585755 | 5.1:+72221677 | None:intergenic |
TTTCTTTAGACCAATCTCAT+GGG | 0.587261 | 5.1:-72221531 | MS.gene017058:CDS |
ATGCCTAGTCCTAAAAGGAA+TGG | 0.590231 | 5.1:-72221620 | MS.gene017058:CDS |
TGGCATGCAACTTTGACCAT+CGG | 0.600034 | 5.1:-72222459 | MS.gene017058:CDS |
AAGACTTGTTATTGCTCGAG+CGG | 0.603884 | 5.1:+72222383 | None:intergenic |
AAGTAGCTCAGGTTCACCCA+TGG | 0.604674 | 5.1:+72222808 | None:intergenic |
AGCTGCAACTACCTCCTCGT+TGG | 0.607766 | 5.1:+72223036 | None:intergenic |
ACTTTGCAACAACCGTGGTG+TGG | 0.609718 | 5.1:-72222789 | MS.gene017058:CDS |
TTGGGTGGAAGAGCATCGAC+CGG | 0.614426 | 5.1:-72221816 | MS.gene017058:CDS |
AGCAGATGGACCGACATTTG+TGG | 0.619293 | 5.1:-72221753 | MS.gene017058:CDS |
GGAGGTAGTTGCAGCTACCA+AGG | 0.620571 | 5.1:-72223029 | MS.gene017058:CDS |
AATAGGCGTCCGCTATCCGA+TGG | 0.620621 | 5.1:+72222443 | None:intergenic |
TGACATGTACATCTCCATCT+CGG | 0.620929 | 5.1:-72222281 | MS.gene017058:CDS |
ATGTACATGTCATAGAGTGA+AGG | 0.625954 | 5.1:+72222292 | None:intergenic |
CCGGAAGACACCACAAATGT+CGG | 0.632982 | 5.1:+72221743 | None:intergenic |
CAACTTTGACCATCGGATAG+CGG | 0.635631 | 5.1:-72222452 | MS.gene017058:CDS |
CTTGTTCCAAAGAAAACACA+TGG | 0.639769 | 5.1:-72222689 | MS.gene017058:CDS |
ATTTATTGCGGAGTTCCTGG+TGG | 0.643183 | 5.1:-72221776 | MS.gene017058:CDS |
GAACACACCAATACTAACAG+GGG | 0.649933 | 5.1:+72222958 | None:intergenic |
AAAATGGGGATTGTGGTCGA+CGG | 0.658600 | 5.1:-72222034 | MS.gene017058:CDS |
GGAAGAATGAGATTAAGCAA+TGG | 0.658733 | 5.1:-72222013 | MS.gene017058:CDS |
GCAACTTGGATGAAATGTGG+GGG | 0.664532 | 5.1:-72222490 | MS.gene017058:CDS |
AGAACACACCAATACTAACA+GGG | 0.664943 | 5.1:+72222957 | None:intergenic |
TCTCAATTTGCATAAGCCAG+AGG | 0.668470 | 5.1:-72222729 | MS.gene017058:CDS |
GGGCTGGCAAGGATTTATTG+CGG | 0.669488 | 5.1:-72221788 | MS.gene017058:CDS |
GAAATGGTCACTAACTCCAT+GGG | 0.670922 | 5.1:-72222824 | MS.gene017058:CDS |
ACATGTCATAGAGTGAAGGA+TGG | 0.670976 | 5.1:+72222296 | None:intergenic |
TAGCCAGCATCACCACCACA+AGG | 0.673907 | 5.1:+72221653 | None:intergenic |
GGCAACTTGGATGAAATGTG+GGG | 0.674719 | 5.1:-72222491 | MS.gene017058:CDS |
GAGATTGGTCTAAAGAAATG+GGG | 0.682938 | 5.1:+72221536 | None:intergenic |
GGAATACTTGCACTTCATGG+AGG | 0.690260 | 5.1:-72221567 | MS.gene017058:CDS |
CCACCAATAACACTATTGTG+GGG | 0.693360 | 5.1:-72222901 | MS.gene017058:CDS |
AACACACCAATACTAACAGG+GGG | 0.696942 | 5.1:+72222959 | None:intergenic |
GAGCTACTTTGCAACAACCG+TGG | 0.705966 | 5.1:-72222794 | MS.gene017058:CDS |
CAACTTGGATGAAATGTGGG+GGG | 0.712514 | 5.1:-72222489 | MS.gene017058:CDS |
TGTGAATATTACCAACGAGG+AGG | 0.715768 | 5.1:-72223047 | MS.gene017058:CDS |
CAGTGTGAATATTACCAACG+AGG | 0.720907 | 5.1:-72223050 | MS.gene017058:CDS |
CTTCAACAAAATCCACACCA+CGG | 0.748079 | 5.1:+72222777 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGAATTATTATCATTATGC+AGG | - | chr5.1:72222006-72222025 | MS.gene017058:CDS | 20.0% |
!! | TCTATTAATTTACAACTGTA+GGG | + | chr5.1:72222655-72222674 | None:intergenic | 20.0% |
!! | TTCTATTAATTTACAACTGT+AGG | + | chr5.1:72222656-72222675 | None:intergenic | 20.0% |
!!! | GTTTGTTTTAATATCTGAAT+CGG | + | chr5.1:72222359-72222378 | None:intergenic | 20.0% |
!!! | TTTGTTTTAATATCTGAATC+GGG | + | chr5.1:72222358-72222377 | None:intergenic | 20.0% |
! | AAACATGTTTCTTGTATCAT+GGG | - | chr5.1:72222171-72222190 | MS.gene017058:CDS | 25.0% |
! | AAGAAACATGTTTGTAGAAT+AGG | + | chr5.1:72222164-72222183 | None:intergenic | 25.0% |
! | AATATGATAAGATCCAACTA+CGG | + | chr5.1:72222914-72222933 | None:intergenic | 25.0% |
! | AATTGTATGTATAATTGTGC+AGG | - | chr5.1:72222075-72222094 | MS.gene017058:CDS | 25.0% |
! | ATGAATCCTATGATTACTAT+TGG | - | chr5.1:72221661-72221680 | MS.gene017058:CDS | 25.0% |
!! | AGTTTATGAGTTCGTATTTT+GGG | - | chr5.1:72222614-72222633 | MS.gene017058:intron | 25.0% |
!!! | ACAAAAACATTTTGATCTCA+AGG | - | chr5.1:72221966-72221985 | MS.gene017058:CDS | 25.0% |
!!! | CAAAAACATTTTGATCTCAA+GGG | - | chr5.1:72221967-72221986 | MS.gene017058:CDS | 25.0% |
ATATGATAAGATCCAACTAC+GGG | + | chr5.1:72222913-72222932 | None:intergenic | 30.0% | |
ATTTCTTGGGACTAATTGAT+TGG | - | chr5.1:72222752-72222771 | MS.gene017058:CDS | 30.0% | |
ATTTCTTTAGACCAATCTCA+TGG | - | chr5.1:72223055-72223074 | MS.gene017058:CDS | 30.0% | |
CAAACATGTTTCTTGTATCA+TGG | - | chr5.1:72222170-72222189 | MS.gene017058:CDS | 30.0% | |
GAAATGTTGTTGCAAAAATG+GGG | - | chr5.1:72222539-72222558 | MS.gene017058:intron | 30.0% | |
GGAAATGTTGTTGCAAAAAT+GGG | - | chr5.1:72222538-72222557 | MS.gene017058:intron | 30.0% | |
TGGAAATGTTGTTGCAAAAA+TGG | - | chr5.1:72222537-72222556 | MS.gene017058:intron | 30.0% | |
TTTCTTGGGACTAATTGATT+GGG | - | chr5.1:72222753-72222772 | MS.gene017058:CDS | 30.0% | |
TTTCTTTAGACCAATCTCAT+GGG | - | chr5.1:72223056-72223075 | MS.gene017058:CDS | 30.0% | |
! | AATCATTTTCTGCTTTCTTG+TGG | - | chr5.1:72222482-72222501 | MS.gene017058:CDS | 30.0% |
! | GAGTTTATGAGTTCGTATTT+TGG | - | chr5.1:72222613-72222632 | MS.gene017058:intron | 30.0% |
!! | ATGAGATTGGTCTAAAGAAA+TGG | + | chr5.1:72223056-72223075 | None:intergenic | 30.0% |
!! | TGAGATTGGTCTAAAGAAAT+GGG | + | chr5.1:72223055-72223074 | None:intergenic | 30.0% |
AAGAACACACCAATACTAAC+AGG | + | chr5.1:72221634-72221653 | None:intergenic | 35.0% | |
ACAAAGATTTCCAGAGTCAA+AGG | - | chr5.1:72222867-72222886 | MS.gene017058:CDS | 35.0% | |
ACCACCAATAACACTATTGT+GGG | - | chr5.1:72221685-72221704 | MS.gene017058:CDS | 35.0% | |
AGAACACACCAATACTAACA+GGG | + | chr5.1:72221633-72221652 | None:intergenic | 35.0% | |
ATGAAGTGCAAGTATTCCTT+AGG | + | chr5.1:72223018-72223037 | None:intergenic | 35.0% | |
ATGTACATGTCATAGAGTGA+AGG | + | chr5.1:72222298-72222317 | None:intergenic | 35.0% | |
CTAGCCAACACAAAAAATAG+TGG | - | chr5.1:72222436-72222455 | MS.gene017058:CDS | 35.0% | |
CTTGTTCCAAAGAAAACACA+TGG | - | chr5.1:72221898-72221917 | MS.gene017058:CDS | 35.0% | |
GATCTACATGAATCTTCCTA+AGG | - | chr5.1:72222999-72223018 | MS.gene017058:CDS | 35.0% | |
GGAAGAATGAGATTAAGCAA+TGG | - | chr5.1:72222574-72222593 | MS.gene017058:intron | 35.0% | |
GGATCTTATCATATTCCTTG+TGG | - | chr5.1:72222919-72222938 | MS.gene017058:CDS | 35.0% | |
GTTTCTTATTACGTCTTTGC+TGG | - | chr5.1:72221739-72221758 | MS.gene017058:CDS | 35.0% | |
TAAGGAATACTTGCACTTCA+TGG | - | chr5.1:72223017-72223036 | MS.gene017058:CDS | 35.0% | |
TAGTACATGCGACTTATTAG+CGG | + | chr5.1:72222382-72222401 | None:intergenic | 35.0% | |
TCTTATCATATTCCTTGTGG+TGG | - | chr5.1:72222922-72222941 | MS.gene017058:CDS | 35.0% | |
TGCAACAACATTTCCACTAT+TGG | + | chr5.1:72222533-72222552 | None:intergenic | 35.0% | |
TGTTGACAAGCCATTATGTT+GGG | - | chr5.1:72222681-72222700 | MS.gene017058:CDS | 35.0% | |
TTAATATCTGAATCGGGCTT+GGG | + | chr5.1:72222352-72222371 | None:intergenic | 35.0% | |
TTGTTGACAAGCCATTATGT+TGG | - | chr5.1:72222680-72222699 | MS.gene017058:CDS | 35.0% | |
TTTAATATCTGAATCGGGCT+TGG | + | chr5.1:72222353-72222372 | None:intergenic | 35.0% | |
TTTGAAAAACTCCTTAGCTG+AGG | - | chr5.1:72221711-72221730 | MS.gene017058:CDS | 35.0% | |
! | AACCAATCACCATTCCTTTT+AGG | + | chr5.1:72222979-72222998 | None:intergenic | 35.0% |
! | AGTCAAAGGTAGATTTTGGA+TGG | - | chr5.1:72222881-72222900 | MS.gene017058:CDS | 35.0% |
! | ATTTCCACTATTGGTTGAAG+CGG | + | chr5.1:72222524-72222543 | None:intergenic | 35.0% |
! | GTCAAAGGTAGATTTTGGAT+GGG | - | chr5.1:72222882-72222901 | MS.gene017058:CDS | 35.0% |
! | TCAAAGGTAGATTTTGGATG+GGG | - | chr5.1:72222883-72222902 | MS.gene017058:CDS | 35.0% |
!! | GAGATTGGTCTAAAGAAATG+GGG | + | chr5.1:72223054-72223073 | None:intergenic | 35.0% |
!!! | GCTTCCACTATTTTTTGTGT+TGG | + | chr5.1:72222443-72222462 | None:intergenic | 35.0% |
AACACACCAATACTAACAGG+GGG | + | chr5.1:72221631-72221650 | None:intergenic | 40.0% | |
ACACCCCACAATAGTGTTAT+TGG | + | chr5.1:72221692-72221711 | None:intergenic | 40.0% | |
ACATGTCATAGAGTGAAGGA+TGG | + | chr5.1:72222294-72222313 | None:intergenic | 40.0% | |
AGAAGGTAATCCCATGAGAT+TGG | + | chr5.1:72223069-72223088 | None:intergenic | 40.0% | |
AGGCAACTTGGATGAAATGT+GGG | - | chr5.1:72222095-72222114 | MS.gene017058:CDS | 40.0% | |
AGTACATGCGACTTATTAGC+GGG | + | chr5.1:72222381-72222400 | None:intergenic | 40.0% | |
ATGCCTAGTCCTAAAAGGAA+TGG | - | chr5.1:72222967-72222986 | MS.gene017058:CDS | 40.0% | |
CACCACCAATAACACTATTG+TGG | - | chr5.1:72221684-72221703 | MS.gene017058:CDS | 40.0% | |
CAGTGTGAATATTACCAACG+AGG | - | chr5.1:72221537-72221556 | MS.gene017058:CDS | 40.0% | |
CCAAAATCTACCTTTGACTC+TGG | + | chr5.1:72222880-72222899 | None:intergenic | 40.0% | |
CCACCAATAACACTATTGTG+GGG | - | chr5.1:72221686-72221705 | MS.gene017058:CDS | 40.0% | |
CTTCAACAAAATCCACACCA+CGG | + | chr5.1:72221813-72221832 | None:intergenic | 40.0% | |
GAAATGGTCACTAACTCCAT+GGG | - | chr5.1:72221763-72221782 | MS.gene017058:CDS | 40.0% | |
GAACACACCAATACTAACAG+GGG | + | chr5.1:72221632-72221651 | None:intergenic | 40.0% | |
GACACGGAAGAACATTTCTT+GGG | - | chr5.1:72222739-72222758 | MS.gene017058:CDS | 40.0% | |
GTATAATTGTGCAGGCAACT+TGG | - | chr5.1:72222083-72222102 | MS.gene017058:CDS | 40.0% | |
GTCCTAAAAGGAATGGTGAT+TGG | - | chr5.1:72222974-72222993 | MS.gene017058:CDS | 40.0% | |
TCTCAATTTGCATAAGCCAG+AGG | - | chr5.1:72221858-72221877 | MS.gene017058:CDS | 40.0% | |
TGAAATGGTCACTAACTCCA+TGG | - | chr5.1:72221762-72221781 | MS.gene017058:CDS | 40.0% | |
TGACATGTACATCTCCATCT+CGG | - | chr5.1:72222306-72222325 | MS.gene017058:CDS | 40.0% | |
TGTGAATATTACCAACGAGG+AGG | - | chr5.1:72221540-72221559 | MS.gene017058:CDS | 40.0% | |
TGTTGCAAAAATGGGGATTG+TGG | - | chr5.1:72222546-72222565 | MS.gene017058:intron | 40.0% | |
TTACGTCTTTGCTGGTGAAA+TGG | - | chr5.1:72221747-72221766 | MS.gene017058:CDS | 40.0% | |
TTCTGCTTTCTTGTGGAAGA+TGG | - | chr5.1:72222489-72222508 | MS.gene017058:CDS | 40.0% | |
! | AAAAGGGACCTCTGAAAACA+AGG | + | chr5.1:72222247-72222266 | None:intergenic | 40.0% |
! | AGAGCGAGTTCATGATTTTC+TGG | - | chr5.1:72222708-72222727 | MS.gene017058:CDS | 40.0% |
! | AGCACACCATGTGTTTTCTT+TGG | + | chr5.1:72221907-72221926 | None:intergenic | 40.0% |
! | CAAAGGTAGATTTTGGATGG+GGG | - | chr5.1:72222884-72222903 | MS.gene017058:CDS | 40.0% |
! | CCAGAGTCAAAGGTAGATTT+TGG | - | chr5.1:72222877-72222896 | MS.gene017058:CDS | 40.0% |
! | GTGGTGCCAATAGTAATCAT+AGG | + | chr5.1:72221670-72221689 | None:intergenic | 40.0% |
! | TGACTCTGGAAATCTTTGTC+CGG | + | chr5.1:72222866-72222885 | None:intergenic | 40.0% |
!! | AAGACTTGTTATTGCTCGAG+CGG | + | chr5.1:72222207-72222226 | None:intergenic | 40.0% |
!!! | CAACACAACCTTGTTTTCAG+AGG | - | chr5.1:72222236-72222255 | MS.gene017058:CDS | 40.0% |
!!! | TCACCATTCCTTTTAGGACT+AGG | + | chr5.1:72222973-72222992 | None:intergenic | 40.0% |
!!! | TTCCTTTTAGGACTAGGCAT+TGG | + | chr5.1:72222967-72222986 | None:intergenic | 40.0% |
AAAATGGGGATTGTGGTCGA+CGG | - | chr5.1:72222553-72222572 | MS.gene017058:intron | 45.0% | |
AAGCCAGAGGAAACCATTGA+AGG | - | chr5.1:72221871-72221890 | MS.gene017058:CDS | 45.0% | |
AGAAACAAGAGCCTCAGCTA+AGG | + | chr5.1:72221725-72221744 | None:intergenic | 45.0% | |
AGCCAGAGGAAACCATTGAA+GGG | - | chr5.1:72221872-72221891 | MS.gene017058:CDS | 45.0% | |
AGGATTTATTGCGGAGTTCC+TGG | - | chr5.1:72222808-72222827 | MS.gene017058:CDS | 45.0% | |
ATTTATTGCGGAGTTCCTGG+TGG | - | chr5.1:72222811-72222830 | MS.gene017058:CDS | 45.0% | |
CAACTTGGATGAAATGTGGG+GGG | - | chr5.1:72222098-72222117 | MS.gene017058:CDS | 45.0% | |
CAACTTTGACCATCGGATAG+CGG | - | chr5.1:72222135-72222154 | MS.gene017058:CDS | 45.0% | |
CAGGCAACTTGGATGAAATG+TGG | - | chr5.1:72222094-72222113 | MS.gene017058:CDS | 45.0% | |
CCAAGGCAATGCAAGAACAT+AGG | - | chr5.1:72221575-72221594 | MS.gene017058:CDS | 45.0% | |
CCTATGTTCTTGCATTGCCT+TGG | + | chr5.1:72221578-72221597 | None:intergenic | 45.0% | |
CGCTCTGTAACCCAACATAA+TGG | + | chr5.1:72222694-72222713 | None:intergenic | 45.0% | |
CTACTTCCCCCTGTTAGTAT+TGG | - | chr5.1:72221622-72221641 | MS.gene017058:CDS | 45.0% | |
CTTGGGACTAATTGATTGGG+TGG | - | chr5.1:72222756-72222775 | MS.gene017058:CDS | 45.0% | |
GCAACTTGGATGAAATGTGG+GGG | - | chr5.1:72222097-72222116 | MS.gene017058:CDS | 45.0% | |
GGAATACTTGCACTTCATGG+AGG | - | chr5.1:72223020-72223039 | MS.gene017058:CDS | 45.0% | |
GGACACGGAAGAACATTTCT+TGG | - | chr5.1:72222738-72222757 | MS.gene017058:CDS | 45.0% | |
GGCAACTTGGATGAAATGTG+GGG | - | chr5.1:72222096-72222115 | MS.gene017058:CDS | 45.0% | |
GTCATAGAGTGAAGGATGGA+TGG | + | chr5.1:72222290-72222309 | None:intergenic | 45.0% | |
TAGAGTGAAGGATGGATGGA+AGG | + | chr5.1:72222286-72222305 | None:intergenic | 45.0% | |
TGCCAATGCCTAGTCCTAAA+AGG | - | chr5.1:72222962-72222981 | MS.gene017058:CDS | 45.0% | |
TGGAACAAGCTTCCCTTCAA+TGG | + | chr5.1:72221887-72221906 | None:intergenic | 45.0% | |
TGGCATGCAACTTTGACCAT+CGG | - | chr5.1:72222128-72222147 | MS.gene017058:CDS | 45.0% | |
TTCCCTTCAATGGTTTCCTC+TGG | + | chr5.1:72221877-72221896 | None:intergenic | 45.0% | |
! | CCCCACAATAGTGTTATTGG+TGG | + | chr5.1:72221689-72221708 | None:intergenic | 45.0% |
! | GCGAGTTCATGATTTTCTGG+AGG | - | chr5.1:72222711-72222730 | MS.gene017058:CDS | 45.0% |
!! | AGACTTGTTATTGCTCGAGC+GGG | + | chr5.1:72222206-72222225 | None:intergenic | 45.0% |
!! | TCATGATTTTCTGGAGGCTG+CGG | - | chr5.1:72222717-72222736 | MS.gene017058:CDS | 45.0% |
!! | TGTGTTGGCTAGTAACTGCA+TGG | + | chr5.1:72222428-72222447 | None:intergenic | 45.0% |
AAGTAGCTCAGGTTCACCCA+TGG | + | chr5.1:72221782-72221801 | None:intergenic | 50.0% | |
ACTTTGCAACAACCGTGGTG+TGG | - | chr5.1:72221798-72221817 | MS.gene017058:CDS | 50.0% | |
AGCAGATGGACCGACATTTG+TGG | - | chr5.1:72222834-72222853 | MS.gene017058:CDS | 50.0% | |
AGTGAAGGATGGATGGAAGG+TGG | + | chr5.1:72222283-72222302 | None:intergenic | 50.0% | |
CAATAAATCCTTGCCAGCCC+TGG | + | chr5.1:72222799-72222818 | None:intergenic | 50.0% | |
CCGACATTTGTGGTGTCTTC+CGG | - | chr5.1:72222844-72222863 | MS.gene017058:CDS | 50.0% | |
CCGGAAGACACCACAAATGT+CGG | + | chr5.1:72222847-72222866 | None:intergenic | 50.0% | |
CGGTTGTTGCAAAGTAGCTC+AGG | + | chr5.1:72221793-72221812 | None:intergenic | 50.0% | |
GTGAAGGATGGATGGAAGGT+GGG | + | chr5.1:72222282-72222301 | None:intergenic | 50.0% | |
TCAGCCGCTTCAACCAATAG+TGG | - | chr5.1:72222517-72222536 | MS.gene017058:intron | 50.0% | |
TGGGTGTCTTGGGGTCAAAA+GGG | + | chr5.1:72222263-72222282 | None:intergenic | 50.0% | |
! | ATTCCTTGTGGTGGTGATGC+TGG | - | chr5.1:72222931-72222950 | MS.gene017058:CDS | 50.0% |
! | GAAATGTGGGGGGTTAGTAG+TGG | - | chr5.1:72222108-72222127 | MS.gene017058:CDS | 50.0% |
! | GAGCTACTTTGCAACAACCG+TGG | - | chr5.1:72221793-72221812 | MS.gene017058:CDS | 50.0% |
! | GGGCTGGCAAGGATTTATTG+CGG | - | chr5.1:72222799-72222818 | MS.gene017058:CDS | 50.0% |
!! | ACATGGTGTGCTTGCTGTTC+AGG | - | chr5.1:72221915-72221934 | MS.gene017058:CDS | 50.0% |
AATAGGCGTCCGCTATCCGA+TGG | + | chr5.1:72222147-72222166 | None:intergenic | 55.0% | |
AGCTGCAACTACCTCCTCGT+TGG | + | chr5.1:72221554-72221573 | None:intergenic | 55.0% | |
GATGGAAGGTGGGTGTCTTG+GGG | + | chr5.1:72222272-72222291 | None:intergenic | 55.0% | |
GGAGGTAGTTGCAGCTACCA+AGG | - | chr5.1:72221558-72221577 | MS.gene017058:CDS | 55.0% | |
GGATGGAAGGTGGGTGTCTT+GGG | + | chr5.1:72222273-72222292 | None:intergenic | 55.0% | |
GTGGGTGTCTTGGGGTCAAA+AGG | + | chr5.1:72222264-72222283 | None:intergenic | 55.0% | |
TAGCCAGCATCACCACCACA+AGG | + | chr5.1:72222937-72222956 | None:intergenic | 55.0% | |
TCTGAATCGGGCTTGGGTTC+AGG | + | chr5.1:72222346-72222365 | None:intergenic | 55.0% | |
TGGAGGAGGTAGATCCGAGA+TGG | + | chr5.1:72222323-72222342 | None:intergenic | 55.0% | |
TGGATGGAAGGTGGGTGTCT+TGG | + | chr5.1:72222274-72222293 | None:intergenic | 55.0% | |
!! | AAGAGCATCGACCGGTTCCA+GGG | - | chr5.1:72222779-72222798 | MS.gene017058:CDS | 55.0% |
!! | TTGGGTGGAAGAGCATCGAC+CGG | - | chr5.1:72222771-72222790 | MS.gene017058:CDS | 55.0% |
!! | TTTTCTGGAGGCTGCGGACA+CGG | - | chr5.1:72222723-72222742 | MS.gene017058:CDS | 55.0% |
ATCCTTGCCAGCCCTGGAAC+CGG | + | chr5.1:72222793-72222812 | None:intergenic | 60.0% | |
GAATCGGGCTTGGGTTCAGG+TGG | + | chr5.1:72222343-72222362 | None:intergenic | 60.0% | |
GGAGTTCCTGGTGGAGCAGA+TGG | - | chr5.1:72222820-72222839 | MS.gene017058:CDS | 60.0% | |
!! | GAAGAGCATCGACCGGTTCC+AGG | - | chr5.1:72222778-72222797 | MS.gene017058:CDS | 60.0% |
GGATGGGGGAGACCCGTAGT+TGG | - | chr5.1:72222898-72222917 | MS.gene017058:CDS | 65.0% | |
GGCTTGGGTTCAGGTGGAGG+AGG | + | chr5.1:72222337-72222356 | None:intergenic | 65.0% | |
GTCGGTCCATCTGCTCCACC+AGG | + | chr5.1:72222829-72222848 | None:intergenic | 65.0% | |
TCGGGCTTGGGTTCAGGTGG+AGG | + | chr5.1:72222340-72222359 | None:intergenic | 65.0% | |
! | GACCGGTTCCAGGGCTGGCA+AGG | - | chr5.1:72222788-72222807 | MS.gene017058:CDS | 70.0% |
! | GCATCGACCGGTTCCAGGGC+TGG | - | chr5.1:72222783-72222802 | MS.gene017058:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 72221514 | 72223095 | 72221514 | ID=MS.gene017058 |
chr5.1 | mRNA | 72221514 | 72223095 | 72221514 | ID=MS.gene017058.t1;Parent=MS.gene017058 |
chr5.1 | exon | 72222673 | 72223095 | 72222673 | ID=MS.gene017058.t1.exon1;Parent=MS.gene017058.t1 |
chr5.1 | CDS | 72222673 | 72223095 | 72222673 | ID=cds.MS.gene017058.t1;Parent=MS.gene017058.t1 |
chr5.1 | exon | 72221514 | 72222512 | 72221514 | ID=MS.gene017058.t1.exon2;Parent=MS.gene017058.t1 |
chr5.1 | CDS | 72221514 | 72222512 | 72221514 | ID=cds.MS.gene017058.t1;Parent=MS.gene017058.t1 |
Gene Sequence |
Protein sequence |