Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69496.t1 | XP_013459647.1 | 92 | 477 | 31 | 1 | 1 | 477 | 1 | 470 | 6.60E-256 | 892.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69496.t1 | Q94CD1 | 26.2 | 446 | 254 | 18 | 1 | 420 | 17 | 413 | 6.7e-23 | 110.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69496.t1 | A0A072UX74 | 92.0 | 477 | 31 | 1 | 1 | 477 | 1 | 470 | 4.7e-256 | 892.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69496.t1 | MTR_3g450710 | 92.034 | 477 | 31 | 1 | 1 | 477 | 1 | 470 | 0.0 | 882 |
MS.gene69496.t1 | MTR_3g450690 | 88.679 | 477 | 51 | 1 | 1 | 477 | 1 | 474 | 0.0 | 833 |
MS.gene69496.t1 | MTR_5g090830 | 67.223 | 479 | 137 | 8 | 4 | 475 | 4 | 469 | 0.0 | 651 |
MS.gene69496.t1 | MTR_5g090810 | 66.597 | 479 | 140 | 8 | 4 | 475 | 4 | 469 | 0.0 | 647 |
MS.gene69496.t1 | MTR_5g090880 | 64.211 | 475 | 151 | 6 | 9 | 475 | 8 | 471 | 0.0 | 592 |
MS.gene69496.t1 | MTR_5g026320 | 36.076 | 474 | 267 | 14 | 7 | 475 | 14 | 456 | 2.03e-77 | 249 |
MS.gene69496.t1 | MTR_8g075610 | 25.225 | 444 | 271 | 15 | 33 | 460 | 16 | 414 | 1.56e-30 | 123 |
MS.gene69496.t1 | MTR_4g007540 | 25.586 | 469 | 290 | 18 | 9 | 460 | 1 | 427 | 2.37e-26 | 111 |
MS.gene69496.t1 | MTR_4g097090 | 24.034 | 466 | 294 | 16 | 22 | 460 | 17 | 449 | 3.29e-26 | 111 |
MS.gene69496.t1 | MTR_8g096530 | 26.382 | 398 | 236 | 14 | 32 | 416 | 28 | 381 | 5.63e-25 | 107 |
MS.gene69496.t1 | MTR_4g127650 | 24.824 | 427 | 260 | 16 | 21 | 419 | 17 | 410 | 5.22e-24 | 104 |
MS.gene69496.t1 | MTR_2g064495 | 23.649 | 444 | 281 | 16 | 33 | 460 | 25 | 426 | 1.20e-23 | 103 |
MS.gene69496.t1 | MTR_2g105330 | 23.649 | 444 | 281 | 16 | 33 | 460 | 25 | 426 | 2.75e-23 | 102 |
MS.gene69496.t1 | MTR_7g114520 | 24.818 | 411 | 262 | 12 | 72 | 467 | 66 | 444 | 1.48e-22 | 100 |
MS.gene69496.t1 | MTR_3g049150 | 22.249 | 418 | 272 | 12 | 68 | 460 | 51 | 440 | 1.51e-22 | 100 |
MS.gene69496.t1 | MTR_7g027175 | 26.434 | 401 | 240 | 15 | 32 | 420 | 37 | 394 | 1.94e-21 | 97.1 |
MS.gene69496.t1 | MTR_1g053315 | 26.446 | 363 | 225 | 14 | 72 | 420 | 78 | 412 | 2.10e-21 | 97.1 |
MS.gene69496.t1 | MTR_3g026950 | 23.179 | 453 | 295 | 14 | 32 | 461 | 23 | 445 | 4.91e-21 | 95.9 |
MS.gene69496.t1 | MTR_1g040175 | 25.879 | 398 | 221 | 16 | 72 | 435 | 64 | 421 | 5.74e-21 | 95.5 |
MS.gene69496.t1 | MTR_3g098980 | 24.181 | 397 | 245 | 13 | 32 | 416 | 35 | 387 | 6.18e-21 | 95.5 |
MS.gene69496.t1 | MTR_1g040215 | 26.119 | 402 | 223 | 16 | 72 | 439 | 64 | 425 | 1.06e-20 | 94.7 |
MS.gene69496.t1 | MTR_7g114550 | 23.757 | 362 | 228 | 10 | 72 | 420 | 65 | 391 | 4.80e-20 | 92.8 |
MS.gene69496.t1 | MTR_3g070170 | 25.709 | 494 | 273 | 21 | 22 | 468 | 20 | 466 | 7.61e-20 | 92.4 |
MS.gene69496.t1 | MTR_7g114560 | 23.204 | 362 | 230 | 10 | 72 | 420 | 65 | 391 | 1.03e-19 | 92.0 |
MS.gene69496.t1 | MTR_5g076700 | 24.235 | 392 | 244 | 12 | 72 | 439 | 65 | 427 | 2.34e-19 | 90.9 |
MS.gene69496.t1 | MTR_1g081660 | 25.135 | 370 | 228 | 13 | 72 | 428 | 73 | 406 | 6.34e-19 | 89.4 |
MS.gene69496.t1 | MTR_7g086000 | 26.667 | 375 | 218 | 15 | 72 | 416 | 60 | 407 | 6.91e-19 | 89.4 |
MS.gene69496.t1 | MTR_7g114470 | 23.678 | 397 | 241 | 15 | 72 | 439 | 66 | 429 | 1.19e-18 | 88.6 |
MS.gene69496.t1 | MTR_3g101930 | 25.401 | 374 | 226 | 13 | 66 | 418 | 64 | 405 | 2.32e-18 | 87.8 |
MS.gene69496.t1 | MTR_7g114490 | 23.762 | 404 | 265 | 13 | 72 | 463 | 65 | 437 | 1.37e-17 | 85.5 |
MS.gene69496.t1 | MTR_7g084940 | 27.298 | 359 | 211 | 14 | 72 | 416 | 69 | 391 | 1.66e-16 | 82.0 |
MS.gene69496.t1 | MTR_3g086020 | 23.614 | 415 | 253 | 15 | 11 | 416 | 5 | 364 | 1.36e-15 | 79.0 |
MS.gene69496.t1 | MTR_4g055170 | 24.390 | 369 | 222 | 12 | 72 | 418 | 69 | 402 | 2.14e-15 | 78.6 |
MS.gene69496.t1 | MTR_3g465980 | 24.611 | 321 | 203 | 11 | 72 | 377 | 68 | 364 | 1.30e-14 | 76.3 |
MS.gene69496.t1 | MTR_3g112180 | 23.849 | 478 | 276 | 17 | 23 | 466 | 24 | 447 | 1.93e-14 | 75.9 |
MS.gene69496.t1 | MTR_4g094842 | 24.808 | 391 | 239 | 16 | 46 | 418 | 45 | 398 | 3.10e-13 | 72.0 |
MS.gene69496.t1 | MTR_6g053810 | 27.301 | 326 | 182 | 15 | 70 | 371 | 69 | 363 | 6.73e-13 | 70.9 |
MS.gene69496.t1 | MTR_7g114510 | 22.393 | 326 | 215 | 9 | 148 | 467 | 9 | 302 | 7.10e-13 | 69.7 |
MS.gene69496.t1 | MTR_8g041770 | 25.761 | 427 | 228 | 17 | 24 | 418 | 22 | 391 | 2.43e-12 | 68.9 |
MS.gene69496.t1 | MTR_2g007880 | 24.324 | 407 | 247 | 13 | 32 | 420 | 40 | 403 | 2.02e-11 | 66.2 |
MS.gene69496.t1 | MTR_1g040320 | 33.333 | 150 | 81 | 5 | 72 | 211 | 64 | 204 | 2.60e-11 | 65.9 |
MS.gene69496.t1 | MTR_7g110610 | 28.571 | 154 | 98 | 4 | 72 | 213 | 55 | 208 | 2.71e-11 | 65.5 |
MS.gene69496.t1 | MTR_1g035890 | 27.273 | 231 | 147 | 6 | 72 | 294 | 67 | 284 | 3.57e-11 | 65.5 |
MS.gene69496.t1 | MTR_1g040315 | 26.210 | 248 | 149 | 9 | 72 | 303 | 64 | 293 | 5.16e-11 | 64.7 |
MS.gene69496.t1 | MTR_4g094832 | 26.048 | 334 | 196 | 12 | 100 | 418 | 83 | 380 | 6.21e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69496.t1 | AT1G78990 | 56.900 | 471 | 173 | 7 | 9 | 476 | 11 | 454 | 0.0 | 516 |
MS.gene69496.t1 | AT1G32910 | 57.173 | 474 | 170 | 7 | 9 | 475 | 11 | 458 | 9.13e-179 | 509 |
MS.gene69496.t1 | AT5G16410 | 51.042 | 480 | 192 | 11 | 8 | 476 | 33 | 480 | 3.15e-159 | 460 |
MS.gene69496.t1 | AT1G31490 | 36.722 | 482 | 247 | 15 | 9 | 476 | 4 | 441 | 7.47e-81 | 258 |
MS.gene69496.t1 | AT5G48930 | 26.477 | 457 | 277 | 19 | 20 | 460 | 14 | 427 | 2.52e-27 | 114 |
MS.gene69496.t1 | AT5G41040 | 26.341 | 410 | 231 | 16 | 32 | 420 | 54 | 413 | 4.05e-26 | 110 |
MS.gene69496.t1 | AT5G41040 | 26.341 | 410 | 231 | 16 | 32 | 420 | 38 | 397 | 4.73e-26 | 110 |
MS.gene69496.t1 | AT5G57840 | 26.789 | 489 | 283 | 21 | 11 | 476 | 3 | 439 | 7.42e-24 | 104 |
MS.gene69496.t1 | AT3G48720 | 25.806 | 465 | 286 | 16 | 9 | 460 | 7 | 425 | 4.65e-23 | 101 |
MS.gene69496.t1 | AT3G03480 | 24.895 | 474 | 269 | 17 | 5 | 441 | 13 | 436 | 1.19e-21 | 97.8 |
MS.gene69496.t1 | AT2G19070 | 23.709 | 426 | 269 | 16 | 21 | 420 | 11 | 406 | 1.54e-21 | 97.4 |
MS.gene69496.t1 | AT1G65450 | 25.737 | 373 | 214 | 14 | 72 | 427 | 72 | 398 | 1.96e-21 | 97.1 |
MS.gene69496.t1 | AT5G63560 | 25.866 | 433 | 252 | 17 | 6 | 420 | 2 | 383 | 2.03e-19 | 90.9 |
MS.gene69496.t1 | AT1G28680 | 24.566 | 403 | 262 | 14 | 25 | 415 | 12 | 384 | 2.09e-19 | 90.9 |
MS.gene69496.t1 | AT5G17540 | 24.524 | 473 | 263 | 20 | 8 | 439 | 6 | 425 | 9.58e-19 | 89.0 |
MS.gene69496.t1 | AT1G24430 | 24.942 | 429 | 240 | 17 | 11 | 416 | 5 | 374 | 5.41e-18 | 86.7 |
MS.gene69496.t1 | AT1G28680 | 24.668 | 377 | 249 | 13 | 25 | 387 | 12 | 367 | 1.19e-17 | 85.1 |
MS.gene69496.t1 | AT5G01210 | 26.122 | 490 | 251 | 22 | 36 | 464 | 24 | 463 | 1.93e-17 | 85.1 |
MS.gene69496.t1 | AT1G03390 | 25.182 | 413 | 249 | 17 | 27 | 420 | 38 | 409 | 3.42e-17 | 84.3 |
MS.gene69496.t1 | AT3G50280 | 24.462 | 372 | 223 | 13 | 68 | 416 | 55 | 391 | 4.35e-17 | 84.0 |
MS.gene69496.t1 | AT1G27620 | 24.838 | 463 | 272 | 20 | 18 | 460 | 16 | 422 | 5.68e-17 | 83.6 |
MS.gene69496.t1 | AT3G26040 | 24.439 | 446 | 239 | 20 | 11 | 422 | 3 | 384 | 8.15e-17 | 83.2 |
MS.gene69496.t1 | AT3G50270 | 25.464 | 377 | 221 | 17 | 65 | 416 | 55 | 396 | 1.02e-16 | 82.8 |
MS.gene69496.t1 | AT4G15390 | 25.688 | 327 | 193 | 12 | 30 | 343 | 29 | 318 | 1.88e-14 | 75.9 |
MS.gene69496.t1 | AT4G15390 | 25.688 | 327 | 193 | 12 | 30 | 343 | 29 | 318 | 1.88e-14 | 75.9 |
MS.gene69496.t1 | AT5G67160 | 25.389 | 386 | 227 | 16 | 62 | 426 | 46 | 391 | 2.38e-14 | 75.5 |
MS.gene69496.t1 | AT3G50300 | 24.728 | 368 | 227 | 13 | 68 | 416 | 55 | 391 | 2.38e-14 | 75.5 |
MS.gene69496.t1 | AT5G67150 | 25.337 | 371 | 222 | 16 | 68 | 416 | 57 | 394 | 3.29e-14 | 75.1 |
MS.gene69496.t1 | AT5G47950 | 24.306 | 288 | 176 | 8 | 7 | 287 | 2 | 254 | 6.12e-14 | 73.9 |
MS.gene69496.t1 | AT3G30280 | 24.286 | 280 | 171 | 7 | 20 | 289 | 17 | 265 | 2.61e-13 | 72.0 |
MS.gene69496.t1 | AT5G38130 | 24.490 | 392 | 233 | 16 | 67 | 434 | 74 | 426 | 3.46e-13 | 72.0 |
MS.gene69496.t1 | AT5G07080 | 23.481 | 362 | 234 | 11 | 72 | 418 | 70 | 403 | 3.46e-12 | 68.6 |
MS.gene69496.t1 | AT5G23970 | 22.738 | 431 | 256 | 16 | 11 | 421 | 3 | 376 | 4.52e-12 | 68.2 |
MS.gene69496.t1 | AT2G25150 | 24.800 | 250 | 162 | 7 | 72 | 308 | 67 | 303 | 1.23e-11 | 67.0 |
MS.gene69496.t1 | AT1G24420 | 22.946 | 353 | 212 | 13 | 83 | 421 | 76 | 382 | 1.50e-11 | 66.6 |
MS.gene69496.t1 | AT1G24420 | 22.946 | 353 | 212 | 13 | 83 | 421 | 76 | 382 | 1.50e-11 | 66.6 |
Find 153 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGGAAGACAAGGTGGATTT+TGG | 0.150775 | 3.1:-32086356 | MS.gene69496:CDS |
TGCCAATGCCAAGCCCTTTA+AGG | 0.191687 | 3.1:-32086271 | MS.gene69496:CDS |
CTTATTAACCTTTGAATCTA+TGG | 0.198337 | 3.1:-32089957 | MS.gene69496:CDS |
ATCAACCACTATGCCCATTT+TGG | 0.201094 | 3.1:+32086685 | None:intergenic |
ACCCAATCACCATTCCTTAA+AGG | 0.230515 | 3.1:+32086257 | None:intergenic |
TAAAATGGTTATTGCCAAAA+TGG | 0.237738 | 3.1:-32086699 | MS.gene69496:CDS |
CATAGATTCAAAGGTTAATA+AGG | 0.252094 | 3.1:+32089958 | None:intergenic |
GCAACGATGACACACTATTT+TGG | 0.255431 | 3.1:-32086614 | MS.gene69496:CDS |
ACAACGGAGGAGCACTTCTT+AGG | 0.274268 | 3.1:-32086488 | MS.gene69496:CDS |
GAAGGCATTGGCTAAGGTTT+TGG | 0.283316 | 3.1:-32089921 | MS.gene69496:CDS |
GTTTCATATTATGCCTTTGC+AGG | 0.292768 | 3.1:-32089899 | MS.gene69496:CDS |
AGCACGCCATGCTTCCTCTT+TGG | 0.295076 | 3.1:+32089734 | None:intergenic |
CACAAAAGCCGGCCCTTCAT+TGG | 0.296461 | 3.1:+32086400 | None:intergenic |
CACAAGGAATGGTAGTAAAA+TGG | 0.320372 | 3.1:-32086714 | MS.gene69496:CDS |
GTCTTCCGGACAAAGATTTC+CGG | 0.322497 | 3.1:-32086375 | MS.gene69496:CDS |
ACTTCTTAGGGCTCATTGAT+TGG | 0.336465 | 3.1:-32086475 | MS.gene69496:CDS |
CTTCACCACCCCAAGGAAAA+TGG | 0.338457 | 3.1:+32086306 | None:intergenic |
ACAAAAGCCGGCCCTTCATT+GGG | 0.339184 | 3.1:+32086401 | None:intergenic |
GGCCGAAGGAGGAGGGAGTT+TGG | 0.342738 | 3.1:+32086895 | None:intergenic |
TGGGCTTGATGGGAATTGTT+TGG | 0.350077 | 3.1:+32087023 | None:intergenic |
TGTTATTGTGTTGGGCTTGA+TGG | 0.358214 | 3.1:+32087012 | None:intergenic |
ATATCTAAGAAAATGGATAA+TGG | 0.358864 | 3.1:-32090151 | None:intergenic |
TTTCCTTGGGGTGGTGAAGC+TGG | 0.359837 | 3.1:-32086302 | MS.gene69496:CDS |
CCCAATCACCATTCCTTAAA+GGG | 0.360645 | 3.1:+32086258 | None:intergenic |
CTTCTTAGGGCTCATTGATT+GGG | 0.361435 | 3.1:-32086474 | MS.gene69496:CDS |
CCAAAATCCACCTTGTCTTC+CGG | 0.364145 | 3.1:+32086356 | None:intergenic |
CTCAGGTTCACCCACAGAAT+TGG | 0.365871 | 3.1:+32089865 | None:intergenic |
GCCCTTTAAGGAATGGTGAT+TGG | 0.369179 | 3.1:-32086259 | MS.gene69496:CDS |
AATGTTCTTTCTATCCCATT+TGG | 0.374402 | 3.1:-32086590 | MS.gene69496:CDS |
GAGTTGGTTGATAAGCCATT+AGG | 0.377668 | 3.1:-32086551 | MS.gene69496:CDS |
AAGAAAATGGATAATGGAAA+TGG | 0.381443 | 3.1:-32090145 | None:intergenic |
CCCTTTAAGGAATGGTGATT+GGG | 0.385492 | 3.1:-32086258 | MS.gene69496:CDS |
TCCACTGATTTCCCGCCAAA+TGG | 0.389856 | 3.1:+32086575 | None:intergenic |
AGGAGGAGGGAGTTTGGAAA+TGG | 0.390066 | 3.1:+32086901 | None:intergenic |
TGTCTTTATGCCTTTGACTT+GGG | 0.398097 | 3.1:-32086177 | MS.gene69496:CDS |
TTTCCTTCAACAGATTCATC+AGG | 0.405811 | 3.1:+32089764 | None:intergenic |
CAATAAATCTTCGCCAATCC+AGG | 0.408088 | 3.1:+32086431 | None:intergenic |
CTACGGTGACGTAGTATATT+CGG | 0.410471 | 3.1:+32086849 | None:intergenic |
AATTGTTTGGTGGGCTATCT+CGG | 0.413884 | 3.1:+32087036 | None:intergenic |
CTCAAGCTTCGAAGGCTTAG+TGG | 0.414101 | 3.1:+32086778 | None:intergenic |
AGTTGGTTGATAAGCCATTA+GGG | 0.417113 | 3.1:-32086550 | MS.gene69496:CDS |
CAAACATGTTCCTCGTATCA+TGG | 0.418843 | 3.1:-32087060 | MS.gene69496:CDS |
TCACCATTCCTTAAAGGGCT+TGG | 0.420562 | 3.1:+32086263 | None:intergenic |
GGAGGAGGGAGTTTGGAAAT+GGG | 0.420619 | 3.1:+32086902 | None:intergenic |
GGCAGCCAATGTTCTTGTAT+TGG | 0.431527 | 3.1:+32090070 | None:intergenic |
TTCCAAACTCCCTCCTCCTT+CGG | 0.432214 | 3.1:-32086897 | MS.gene69496:CDS |
ATGTCTTTATGCCTTTGACT+TGG | 0.436128 | 3.1:-32086178 | MS.gene69496:CDS |
GTTATTGTGTTGGGCTTGAT+GGG | 0.437078 | 3.1:+32087013 | None:intergenic |
TCATCAACCACCCACCCTAA+TGG | 0.439188 | 3.1:+32086536 | None:intergenic |
TTAGCGGTTGTTATTGTGTT+GGG | 0.440768 | 3.1:+32087004 | None:intergenic |
TATTGTGGTGGCCCCAATGA+AGG | 0.441633 | 3.1:-32086413 | MS.gene69496:CDS |
AACCCTGATGAATCTGTTGA+AGG | 0.446103 | 3.1:-32089767 | MS.gene69496:CDS |
AAAATGGTTATTGCCAAAAT+GGG | 0.451609 | 3.1:-32086698 | MS.gene69496:CDS |
TTCCTTAAAGGGCTTGGCAT+TGG | 0.454305 | 3.1:+32086269 | None:intergenic |
GCATGGCGTGCTCGCAGTCC+AGG | 0.455368 | 3.1:-32089723 | MS.gene69496:intron |
GTCTTCCGGAAATCTTTGTC+CGG | 0.456656 | 3.1:+32086370 | None:intergenic |
TTCCGCTTACTTGTGGAAGT+TGG | 0.467896 | 3.1:-32086750 | MS.gene69496:CDS |
CTTCTACCTGCAGTGGATGT+TGG | 0.468221 | 3.1:-32090028 | MS.gene69496:CDS |
CAACGGAGGAGCACTTCTTA+GGG | 0.471002 | 3.1:-32086487 | MS.gene69496:CDS |
TGTTGAAGTGGACAATATCA+TGG | 0.472306 | 3.1:+32089982 | None:intergenic |
CGGTTATTACAAAGAATCTC+AGG | 0.481120 | 3.1:+32089848 | None:intergenic |
GTTAGCGGTTGTTATTGTGT+TGG | 0.485313 | 3.1:+32087003 | None:intergenic |
GTAGCGGTGGCCGAAGGAGG+AGG | 0.486790 | 3.1:+32086887 | None:intergenic |
CTTGATGGGAATTGTTTGGT+GGG | 0.490034 | 3.1:+32087027 | None:intergenic |
ACACCGACCTGTCCCTGGAT+TGG | 0.493701 | 3.1:-32086444 | MS.gene69496:CDS |
GCTTGATGGGAATTGTTTGG+TGG | 0.497543 | 3.1:+32087026 | None:intergenic |
GAAGCACACCGACCTGTCCC+TGG | 0.499177 | 3.1:-32086449 | MS.gene69496:CDS |
AGGGAAGGGTTGATGAAACT+TGG | 0.504037 | 3.1:+32086941 | None:intergenic |
GTGTCATCGTTGCTTCTCTC+CGG | 0.504812 | 3.1:+32086624 | None:intergenic |
CAGCGAGTGATTGCAAGCGT+TGG | 0.508815 | 3.1:+32086819 | None:intergenic |
GGTTAATAAGGTTGTTGAAG+TGG | 0.511067 | 3.1:+32089970 | None:intergenic |
CCACTGATTTCCCGCCAAAT+GGG | 0.511697 | 3.1:+32086576 | None:intergenic |
CGGGAAATCAGTGGAGGAGT+TGG | 0.512407 | 3.1:-32086567 | MS.gene69496:CDS |
TCTCAAGAAGGCATTGGCTA+AGG | 0.515499 | 3.1:-32089927 | MS.gene69496:CDS |
GTTCTTTCTATCCCATTTGG+CGG | 0.518021 | 3.1:-32086587 | MS.gene69496:CDS |
GGGATTATCTCAATCAATGA+TGG | 0.518179 | 3.1:-32086157 | None:intergenic |
ATTAGGGTGGGTGGTTGATG+AGG | 0.520603 | 3.1:-32086534 | MS.gene69496:CDS |
CCGGAAGACACCACAAAAGC+CGG | 0.521064 | 3.1:+32086389 | None:intergenic |
ACGATAGTAGCGATGAGGAC+CGG | 0.521532 | 3.1:-32086643 | MS.gene69496:CDS |
ATCTTCGCCAATCCAGGGAC+AGG | 0.521874 | 3.1:+32086437 | None:intergenic |
TTCTTTCTATCCCATTTGGC+GGG | 0.522012 | 3.1:-32086586 | MS.gene69496:CDS |
AAAATGGGCATAGTGGTTGA+TGG | 0.529328 | 3.1:-32086683 | MS.gene69496:CDS |
TGGTGGCCCCAATGAAGGGC+CGG | 0.537013 | 3.1:-32086408 | MS.gene69496:CDS |
AAACATGTTCCTCGTATCAT+GGG | 0.538111 | 3.1:-32087059 | MS.gene69496:CDS |
GTTGATGGAAGAAGGAGACT+TGG | 0.539963 | 3.1:-32086668 | MS.gene69496:CDS |
TGATAAGCCATTAGGGTGGG+TGG | 0.542648 | 3.1:-32086543 | MS.gene69496:CDS |
TTTGTAGCGGTGGCCGAAGG+AGG | 0.544011 | 3.1:+32086884 | None:intergenic |
TGATTTACTTCTACCTGCAG+TGG | 0.544886 | 3.1:-32090035 | MS.gene69496:CDS |
GCATAGTGGTTGATGGAAGA+AGG | 0.547976 | 3.1:-32086676 | MS.gene69496:CDS |
TGAAGTTGTGTCCAATTCTG+TGG | 0.548471 | 3.1:-32089876 | MS.gene69496:CDS |
GGCTTTGTAGCGGTGGCCGA+AGG | 0.553032 | 3.1:+32086881 | None:intergenic |
AGACACAACCATAGATTCAA+AGG | 0.553429 | 3.1:+32089949 | None:intergenic |
TAGTATATTCGGCTAAGTAA+CGG | 0.554793 | 3.1:+32086860 | None:intergenic |
GCTAATGCAGCCACAAGGAA+TGG | 0.556142 | 3.1:-32086725 | MS.gene69496:CDS |
CCCATTTGGCGGGAAATCAG+TGG | 0.557009 | 3.1:-32086576 | MS.gene69496:CDS |
CAAGCGTTGGAGCTTCTCTA+CGG | 0.561371 | 3.1:+32086832 | None:intergenic |
TTGGATGACGAGGGCTCAGG+AGG | 0.565630 | 3.1:+32086960 | None:intergenic |
GGACACAACTTCACCTGCAA+AGG | 0.565845 | 3.1:+32089886 | None:intergenic |
ATTGTGGTGGCCCCAATGAA+GGG | 0.566085 | 3.1:-32086412 | MS.gene69496:CDS |
GTTGAAGTGGACAATATCAT+GGG | 0.567565 | 3.1:+32089983 | None:intergenic |
ATTGGAGATCATAGAGTCTG+AGG | 0.570615 | 3.1:-32086207 | MS.gene69496:CDS |
ACGAAAACATGGTTTGTTAG+CGG | 0.570643 | 3.1:+32086988 | None:intergenic |
CTGCAGGTAGAAGTAAATCA+AGG | 0.571413 | 3.1:+32090038 | None:intergenic |
TATGGTTGTGTCTCTCAAGA+AGG | 0.571432 | 3.1:-32089939 | MS.gene69496:CDS |
AGGAGGGAGCGACGAAAACA+TGG | 0.572501 | 3.1:+32086977 | None:intergenic |
TTTGTTCCAAAGAGGAAGCA+TGG | 0.576773 | 3.1:-32089740 | MS.gene69496:CDS |
CTTAGGGCTCATTGATTGGG+TGG | 0.576867 | 3.1:-32086471 | MS.gene69496:CDS |
TTCCTTCAACAGATTCATCA+GGG | 0.578977 | 3.1:+32089765 | None:intergenic |
AAGGAAAGTTTGTTCCAAAG+AGG | 0.579643 | 3.1:-32089748 | MS.gene69496:CDS |
TATTGCCAAAATGGGCATAG+TGG | 0.579804 | 3.1:-32086690 | MS.gene69496:CDS |
TAGCGGTGGCCGAAGGAGGA+GGG | 0.580998 | 3.1:+32086888 | None:intergenic |
TGTGTCTCTCAAGAAGGCAT+TGG | 0.582810 | 3.1:-32089933 | MS.gene69496:CDS |
ATGCCAAGCCCTTTAAGGAA+TGG | 0.583943 | 3.1:-32086266 | MS.gene69496:CDS |
AACTTGGATGACGAGGGCTC+AGG | 0.585088 | 3.1:+32086957 | None:intergenic |
TGGGAATGTACATATCGTCA+AGG | 0.591885 | 3.1:+32086921 | None:intergenic |
AACACACCAACATCCACTGC+AGG | 0.594572 | 3.1:+32090022 | None:intergenic |
TTGAGATAATCCCAAGTCAA+AGG | 0.597274 | 3.1:+32086167 | None:intergenic |
GCTAAGTAACGGCTTTGTAG+CGG | 0.597665 | 3.1:+32086871 | None:intergenic |
TGTGACAAATGAAGAGGTAG+TGG | 0.598358 | 3.1:-32090104 | MS.gene69496:CDS |
AACCAACTTCCACAAGTAAG+CGG | 0.602888 | 3.1:+32086748 | None:intergenic |
GGTTGATAAGCCATTAGGGT+GGG | 0.604220 | 3.1:-32086546 | MS.gene69496:CDS |
ACAAAGATTTCCGGAAGACA+AGG | 0.604250 | 3.1:-32086366 | MS.gene69496:CDS |
TGTACATATCGTCAAGGGAA+GGG | 0.609748 | 3.1:+32086927 | None:intergenic |
CAAAAGCCGGCCCTTCATTG+GGG | 0.611698 | 3.1:+32086402 | None:intergenic |
GGGAATGTACATATCGTCAA+GGG | 0.612337 | 3.1:+32086922 | None:intergenic |
AATAAATCTTCGCCAATCCA+GGG | 0.616604 | 3.1:+32086432 | None:intergenic |
CTCGCTGCTTTAGCTAACAA+TGG | 0.616670 | 3.1:-32086803 | MS.gene69496:CDS |
GCAACTTCATTAAAGTGTGG+TGG | 0.618452 | 3.1:-32087133 | MS.gene69496:CDS |
AAGTAACGGCTTTGTAGCGG+TGG | 0.620157 | 3.1:+32086874 | None:intergenic |
AGTAAATCAAGGTTAGAGAG+TGG | 0.623867 | 3.1:+32090049 | None:intergenic |
TTGGCGAAGATTTATTGTGG+TGG | 0.627427 | 3.1:-32086425 | MS.gene69496:CDS |
GAGATTCTTTGTAATAACCG+TGG | 0.629424 | 3.1:-32089845 | MS.gene69496:CDS |
GGATTGGCGAAGATTTATTG+TGG | 0.634312 | 3.1:-32086428 | MS.gene69496:CDS |
TTGATGAAACTTGGATGACG+AGG | 0.635264 | 3.1:+32086950 | None:intergenic |
ATGTACATATCGTCAAGGGA+AGG | 0.640262 | 3.1:+32086926 | None:intergenic |
CTATCTCGGCCCATGATACG+AGG | 0.641552 | 3.1:+32087050 | None:intergenic |
TGTTACCAATACAAGAACAT+TGG | 0.641970 | 3.1:-32090075 | MS.gene69496:CDS |
TCGCCAATCCAGGGACAGGT+CGG | 0.647662 | 3.1:+32086441 | None:intergenic |
TGGTTGATAAGCCATTAGGG+TGG | 0.648057 | 3.1:-32086547 | MS.gene69496:CDS |
ACCACCCCAAGGAAAATGGT+AGG | 0.648109 | 3.1:+32086310 | None:intergenic |
AAGATTTCCGGAAGACAAGG+TGG | 0.648868 | 3.1:-32086363 | MS.gene69496:CDS |
GTTTGTGTCAGTAGCAACAA+CGG | 0.654514 | 3.1:-32086504 | MS.gene69496:CDS |
GAAGTTGTGTCCAATTCTGT+GGG | 0.658652 | 3.1:-32089875 | MS.gene69496:CDS |
TGTGAGTGTGACAAATGAAG+AGG | 0.662729 | 3.1:-32090110 | MS.gene69496:CDS |
CTTCAACAAAATCAACTCCA+CGG | 0.668456 | 3.1:+32089828 | None:intergenic |
TAACCAGCTTCACCACCCCA+AGG | 0.673339 | 3.1:+32086299 | None:intergenic |
TGGATGACGAGGGCTCAGGA+GGG | 0.673717 | 3.1:+32086961 | None:intergenic |
CAGGCAACTTCATTAAAGTG+TGG | 0.676025 | 3.1:-32087136 | MS.gene69496:CDS |
TGGTTGCTAATGCAGCCACA+AGG | 0.677741 | 3.1:-32086730 | MS.gene69496:CDS |
TGATGAAACTTGGATGACGA+GGG | 0.690763 | 3.1:+32086951 | None:intergenic |
ATTTGGCGGGAAATCAGTGG+AGG | 0.694169 | 3.1:-32086573 | MS.gene69496:CDS |
TGGAAACGATAGTAGCGATG+AGG | 0.708341 | 3.1:-32086648 | MS.gene69496:CDS |
TGTGTCAGTAGCAACAACGG+AGG | 0.765856 | 3.1:-32086501 | MS.gene69496:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAAAAAAGAAAAAAAAA+GGG | + | chr3.1:32088711-32088730 | None:intergenic | 10.0% |
!! | ATGATATAATATCAATAAAT+TGG | + | chr3.1:32087863-32087882 | None:intergenic | 10.0% |
!! | TAGTTAAAATGAAAAATAAT+GGG | - | chr3.1:32088008-32088027 | MS.gene69496:intron | 10.0% |
!! | TTAGTTAAAATGAAAAATAA+TGG | - | chr3.1:32088007-32088026 | MS.gene69496:intron | 10.0% |
!!! | AAGATATTAGTATATTTTTA+AGG | + | chr3.1:32088185-32088204 | None:intergenic | 10.0% |
!!! | CATTTTAACTAAAATTTATT+AGG | + | chr3.1:32087999-32088018 | None:intergenic | 10.0% |
!!! | TTGATTGAATATATTTTATT+CGG | - | chr3.1:32086626-32086645 | MS.gene69496:CDS | 10.0% |
!! | GAAAGAAAAAAGAAAAAAAA+AGG | + | chr3.1:32088712-32088731 | None:intergenic | 15.0% |
!! | TATCCATTAAAAAATTTCAA+TGG | - | chr3.1:32086964-32086983 | MS.gene69496:CDS | 15.0% |
!!! | AAAAAGTAAATAAAAGTACT+AGG | + | chr3.1:32087539-32087558 | None:intergenic | 15.0% |
!!! | AAAAGTAAATAAAAGTACTA+GGG | + | chr3.1:32087538-32087557 | None:intergenic | 15.0% |
!!! | TATCCATTGAAATTTTTTAA+TGG | + | chr3.1:32086970-32086989 | None:intergenic | 15.0% |
!!! | TGAATTTGATTTTATTTACA+AGG | + | chr3.1:32087392-32087411 | None:intergenic | 15.0% |
!!! | TTTTTTTAAACTGTAATAGA+TGG | - | chr3.1:32086699-32086718 | MS.gene69496:CDS | 15.0% |
!! | AAACACTTTAATTGTCAAAT+TGG | - | chr3.1:32088095-32088114 | MS.gene69496:intron | 20.0% |
!! | AACACTTTAATTGTCAAATT+GGG | - | chr3.1:32088096-32088115 | MS.gene69496:intron | 20.0% |
!! | CTCATATAAATAAGAATGAT+GGG | - | chr3.1:32088494-32088513 | MS.gene69496:intron | 20.0% |
!!! | AAAGTGTATATTTTTTATGC+AGG | - | chr3.1:32089144-32089163 | MS.gene69496:intron | 20.0% |
!!! | AGTCCTAATAGAATAATTTT+TGG | + | chr3.1:32087766-32087785 | None:intergenic | 20.0% |
!!! | TGACAATTAAAGTGTTTTTT+TGG | + | chr3.1:32088092-32088111 | None:intergenic | 20.0% |
!!! | TTCTTATTTATATGAGCTTA+AGG | + | chr3.1:32088490-32088509 | None:intergenic | 20.0% |
!!! | TTTTTTTGGATTAGATCATT+GGG | + | chr3.1:32088078-32088097 | None:intergenic | 20.0% |
! | AAAATGGTTATTGCCAAAAT+GGG | - | chr3.1:32089601-32089620 | MS.gene69496:intron | 25.0% |
! | ATTGAAAGGTAAGTAAAACT+TGG | - | chr3.1:32087740-32087759 | MS.gene69496:intron | 25.0% |
! | CATAGATTCAAAGGTTAATA+AGG | + | chr3.1:32086344-32086363 | None:intergenic | 25.0% |
! | CTTATTAACCTTTGAATCTA+TGG | - | chr3.1:32086342-32086361 | MS.gene69496:CDS | 25.0% |
! | GCTCATATAAATAAGAATGA+TGG | - | chr3.1:32088493-32088512 | MS.gene69496:intron | 25.0% |
! | TAAAATGGTTATTGCCAAAA+TGG | - | chr3.1:32089600-32089619 | MS.gene69496:intron | 25.0% |
! | TATTTATATGAGCTTAAGGT+GGG | + | chr3.1:32088486-32088505 | None:intergenic | 25.0% |
! | TGGCCAAAAATTATTCTATT+AGG | - | chr3.1:32087760-32087779 | MS.gene69496:intron | 25.0% |
! | TGTATCGTTTAAATGTAACT+CGG | + | chr3.1:32089095-32089114 | None:intergenic | 25.0% |
! | TTATTTATATGAGCTTAAGG+TGG | + | chr3.1:32088487-32088506 | None:intergenic | 25.0% |
!! | ACTGACAATTTGTTTATAAG+TGG | + | chr3.1:32087632-32087651 | None:intergenic | 25.0% |
!! | CTGACAATTTGTTTATAAGT+GGG | + | chr3.1:32087631-32087650 | None:intergenic | 25.0% |
!! | TGACAATTTGTTTATAAGTG+GGG | + | chr3.1:32087630-32087649 | None:intergenic | 25.0% |
!! | TTGTTTAAATCCATCGTTTT+TGG | + | chr3.1:32086853-32086872 | None:intergenic | 25.0% |
!!! | GTTTTTTTGGATTAGATCAT+TGG | + | chr3.1:32088079-32088098 | None:intergenic | 25.0% |
!!! | TCACATTGATTTTTGCTTAT+TGG | + | chr3.1:32088806-32088825 | None:intergenic | 25.0% |
!!! | TTTTAAGTATGGAAAATTCG+AGG | - | chr3.1:32089024-32089043 | MS.gene69496:intron | 25.0% |
AAGATTATTCCACTGTCTAT+TGG | - | chr3.1:32088431-32088450 | MS.gene69496:intron | 30.0% | |
AATGTTCTTTCTATCCCATT+TGG | - | chr3.1:32089709-32089728 | MS.gene69496:intron | 30.0% | |
ACCAAAAACGATTTAAATCC+GGG | - | chr3.1:32086808-32086827 | MS.gene69496:CDS | 30.0% | |
AGATTATTCCACTGTCTATT+GGG | - | chr3.1:32088364-32088383 | MS.gene69496:intron | 30.0% | |
CAATCAATCCATATGTGAAT+CGG | + | chr3.1:32086995-32087014 | None:intergenic | 30.0% | |
CACCAAAAACGATTTAAATC+CGG | - | chr3.1:32086807-32086826 | MS.gene69496:CDS | 30.0% | |
CTTTAATTGTCAAATTGGGT+TGG | - | chr3.1:32088100-32088119 | MS.gene69496:intron | 30.0% | |
GACAATGCATAATATATGCA+AGG | - | chr3.1:32086761-32086780 | MS.gene69496:CDS | 30.0% | |
GACGTCATTGAAATTTGATT+GGG | - | chr3.1:32088865-32088884 | MS.gene69496:intron | 30.0% | |
TAATCGAGAGTTCAATTGAA+AGG | - | chr3.1:32087726-32087745 | MS.gene69496:intron | 30.0% | |
TAGTATATTCGGCTAAGTAA+CGG | + | chr3.1:32089442-32089461 | None:intergenic | 30.0% | |
TCATTGAAATTTGATTGGGT+TGG | - | chr3.1:32088869-32088888 | MS.gene69496:intron | 30.0% | |
TGACGTCATTGAAATTTGAT+TGG | - | chr3.1:32088864-32088883 | MS.gene69496:intron | 30.0% | |
TGTTACCAATACAAGAACAT+TGG | - | chr3.1:32086224-32086243 | MS.gene69496:CDS | 30.0% | |
TTTCACTACGTTGCAAAAAT+TGG | - | chr3.1:32088242-32088261 | MS.gene69496:intron | 30.0% | |
! | AGAGCTTGGAAAATTTTACA+GGG | + | chr3.1:32087489-32087508 | None:intergenic | 30.0% |
! | ATGGTATTGGACATTTGAAA+TGG | - | chr3.1:32088595-32088614 | MS.gene69496:intron | 30.0% |
! | ATTTACAAGGTATTCGTTGA+CGG | + | chr3.1:32087379-32087398 | None:intergenic | 30.0% |
! | GACAATTTGTTTATAAGTGG+GGG | + | chr3.1:32087629-32087648 | None:intergenic | 30.0% |
! | TTGGACATTTGAAATGGATA+TGG | - | chr3.1:32088601-32088620 | MS.gene69496:intron | 30.0% |
! | TTTTGTGAGATAGGATACAA+AGG | - | chr3.1:32088675-32088694 | MS.gene69496:intron | 30.0% |
!! | AGACTCACACATTTTAAGTA+TGG | - | chr3.1:32089013-32089032 | MS.gene69496:intron | 30.0% |
!! | AGTAAATAAAAGTACTAGGG+TGG | + | chr3.1:32087535-32087554 | None:intergenic | 30.0% |
!! | TTGATTGGGTTGGATAATAA+TGG | - | chr3.1:32088879-32088898 | MS.gene69496:intron | 30.0% |
!! | TTTAAATCCATCGTTTTTGG+TGG | + | chr3.1:32086850-32086869 | None:intergenic | 30.0% |
!! | TTTTGTTGTCTTAGAAAACG+TGG | - | chr3.1:32087556-32087575 | MS.gene69496:intron | 30.0% |
!!! | ATTTAAATCGTTTTTGGTGG+TGG | + | chr3.1:32086806-32086825 | None:intergenic | 30.0% |
!!! | TCATGTTAGTTTTGTGAGAT+AGG | - | chr3.1:32088666-32088685 | MS.gene69496:intron | 30.0% |
AAAACTAAGGGGTGACAATA+TGG | - | chr3.1:32086602-32086621 | MS.gene69496:CDS | 35.0% | |
AAACATGTTCCTCGTATCAT+GGG | - | chr3.1:32089240-32089259 | MS.gene69496:intron | 35.0% | |
AAAGGCAAAATGGATGGTAT+TGG | - | chr3.1:32088582-32088601 | MS.gene69496:intron | 35.0% | |
AAGTGATTTCAGTGGTGAAT+CGG | + | chr3.1:32087351-32087370 | None:intergenic | 35.0% | |
AATAAATCTTCGCCAATCCA+GGG | + | chr3.1:32089870-32089889 | None:intergenic | 35.0% | |
AATCTCTTACACATAACCCA+TGG | + | chr3.1:32088349-32088368 | None:intergenic | 35.0% | |
AGACACAACCATAGATTCAA+AGG | + | chr3.1:32086353-32086372 | None:intergenic | 35.0% | |
AGCATCATAACACCTCAAAT+AGG | + | chr3.1:32088934-32088953 | None:intergenic | 35.0% | |
AGTAAATCAAGGTTAGAGAG+TGG | + | chr3.1:32086253-32086272 | None:intergenic | 35.0% | |
AGTCCAGGTATAAAACTAAG+GGG | - | chr3.1:32086591-32086610 | MS.gene69496:CDS | 35.0% | |
ATGTCTTTATGCCTTTGACT+TGG | - | chr3.1:32090121-32090140 | MS.gene69496:CDS | 35.0% | |
CACAAGGAATGGTAGTAAAA+TGG | - | chr3.1:32089585-32089604 | MS.gene69496:intron | 35.0% | |
CAGTCCAGGTATAAAACTAA+GGG | - | chr3.1:32086590-32086609 | MS.gene69496:CDS | 35.0% | |
CATCATAACACCTCAAATAG+GGG | + | chr3.1:32088932-32088951 | None:intergenic | 35.0% | |
CCAAAAACGATTTAAATCCG+GGG | - | chr3.1:32086809-32086828 | MS.gene69496:CDS | 35.0% | |
CGGTTATTACAAAGAATCTC+AGG | + | chr3.1:32086454-32086473 | None:intergenic | 35.0% | |
CTTCAACAAAATCAACTCCA+CGG | + | chr3.1:32086474-32086493 | None:intergenic | 35.0% | |
GAGATTATTCCACTGTCTAT+TGG | - | chr3.1:32088363-32088382 | MS.gene69496:intron | 35.0% | |
GAGATTCTTTGTAATAACCG+TGG | - | chr3.1:32086454-32086473 | MS.gene69496:CDS | 35.0% | |
GATAGTCACTACTTGAATAG+TGG | - | chr3.1:32088516-32088535 | MS.gene69496:intron | 35.0% | |
GCATCATAACACCTCAAATA+GGG | + | chr3.1:32088933-32088952 | None:intergenic | 35.0% | |
GGTTAATAAGGTTGTTGAAG+TGG | + | chr3.1:32086332-32086351 | None:intergenic | 35.0% | |
GTTCGGTATGGTTTAAAAGA+TGG | - | chr3.1:32088122-32088141 | MS.gene69496:intron | 35.0% | |
GTTGAAGTGGACAATATCAT+GGG | + | chr3.1:32086319-32086338 | None:intergenic | 35.0% | |
GTTTCATATTATGCCTTTGC+AGG | - | chr3.1:32086400-32086419 | MS.gene69496:CDS | 35.0% | |
TCGTTTAAATGTAACTCGGA+TGG | + | chr3.1:32089091-32089110 | None:intergenic | 35.0% | |
TGCATAATATATGCAAGGTC+CGG | - | chr3.1:32086766-32086785 | MS.gene69496:CDS | 35.0% | |
TGCATTTGAGTGCTTATCAA+TGG | + | chr3.1:32088640-32088659 | None:intergenic | 35.0% | |
TGGATATTCCGATTCACATA+TGG | - | chr3.1:32086984-32087003 | MS.gene69496:CDS | 35.0% | |
TGTTGAAGTGGACAATATCA+TGG | + | chr3.1:32086320-32086339 | None:intergenic | 35.0% | |
TTAGTAGCAGCAGTTAACTA+CGG | + | chr3.1:32088211-32088230 | None:intergenic | 35.0% | |
TTCCTTCAACAGATTCATCA+GGG | + | chr3.1:32086537-32086556 | None:intergenic | 35.0% | |
TTGAGATAATCCCAAGTCAA+AGG | + | chr3.1:32090135-32090154 | None:intergenic | 35.0% | |
TTGTCTTAGAAAACGTGGTT+GGG | - | chr3.1:32087561-32087580 | MS.gene69496:intron | 35.0% | |
TTTCCTTCAACAGATTCATC+AGG | + | chr3.1:32086538-32086557 | None:intergenic | 35.0% | |
! | AAGGAAAGTTTGTTCCAAAG+AGG | - | chr3.1:32086551-32086570 | MS.gene69496:CDS | 35.0% |
! | ATAATGGAGTTGGCCAAAAT+TGG | - | chr3.1:32088895-32088914 | MS.gene69496:intron | 35.0% |
! | ATGGATATGGACTGTGATAT+AGG | - | chr3.1:32088614-32088633 | MS.gene69496:intron | 35.0% |
! | CAGAGCTTGGAAAATTTTAC+AGG | + | chr3.1:32087490-32087509 | None:intergenic | 35.0% |
! | CATTTTACTACCATTCCTTG+TGG | + | chr3.1:32089587-32089606 | None:intergenic | 35.0% |
! | TGTCTTTATGCCTTTGACTT+GGG | - | chr3.1:32090122-32090141 | MS.gene69496:CDS | 35.0% |
! | TTAGCGGTTGTTATTGTGTT+GGG | + | chr3.1:32089298-32089317 | None:intergenic | 35.0% |
!! | ACGAAAACATGGTTTGTTAG+CGG | + | chr3.1:32089314-32089333 | None:intergenic | 35.0% |
!! | AGTTGGTTGATAAGCCATTA+GGG | - | chr3.1:32089749-32089768 | MS.gene69496:CDS | 35.0% |
!! | ATTGTCAAATTGGGTTGGTT+CGG | - | chr3.1:32088105-32088124 | MS.gene69496:intron | 35.0% |
!! | CGGATTTAAATCGTTTTTGG+TGG | + | chr3.1:32086809-32086828 | None:intergenic | 35.0% |
!! | GCATCTTTTGAAAGAGCAAT+TGG | - | chr3.1:32090074-32090093 | MS.gene69496:CDS | 35.0% |
!! | TTTTACAGGGTATTCGTTGA+CGG | + | chr3.1:32087476-32087495 | None:intergenic | 35.0% |
!!! | AGGGGTATTGGTTTTTTTTG+AGG | - | chr3.1:32088778-32088797 | MS.gene69496:intron | 35.0% |
!!! | CATGTTGGTTTTGTGAGATA+GGG | + | chr3.1:32088291-32088310 | None:intergenic | 35.0% |
AAAATGGGCATAGTGGTTGA+TGG | - | chr3.1:32089616-32089635 | MS.gene69496:intron | 40.0% | |
AACCAACTTCCACAAGTAAG+CGG | + | chr3.1:32089554-32089573 | None:intergenic | 40.0% | |
AACCCTGATGAATCTGTTGA+AGG | - | chr3.1:32086532-32086551 | MS.gene69496:CDS | 40.0% | |
ACAAAGATTTCCGGAAGACA+AGG | - | chr3.1:32089933-32089952 | MS.gene69496:CDS | 40.0% | |
ACATGTTAAGAGTCCCACAT+CGG | + | chr3.1:32087666-32087685 | None:intergenic | 40.0% | |
ACCCAATCACCATTCCTTAA+AGG | + | chr3.1:32090045-32090064 | None:intergenic | 40.0% | |
ACTTCTTAGGGCTCATTGAT+TGG | - | chr3.1:32089824-32089843 | MS.gene69496:CDS | 40.0% | |
ATCATACAGGCTACAACCAT+GGG | - | chr3.1:32088330-32088349 | MS.gene69496:intron | 40.0% | |
ATGTACATATCGTCAAGGGA+AGG | + | chr3.1:32089376-32089395 | None:intergenic | 40.0% | |
ATTGGAGATCATAGAGTCTG+AGG | - | chr3.1:32090092-32090111 | MS.gene69496:CDS | 40.0% | |
CAAACATGTTCCTCGTATCA+TGG | - | chr3.1:32089239-32089258 | MS.gene69496:intron | 40.0% | |
CAATAAATCTTCGCCAATCC+AGG | + | chr3.1:32089871-32089890 | None:intergenic | 40.0% | |
CAGGCAACTTCATTAAAGTG+TGG | - | chr3.1:32089163-32089182 | MS.gene69496:intron | 40.0% | |
CATAATATATGCAAGGTCCG+GGG | - | chr3.1:32086768-32086787 | MS.gene69496:CDS | 40.0% | |
CCCAATCACCATTCCTTAAA+GGG | + | chr3.1:32090044-32090063 | None:intergenic | 40.0% | |
CTACGGTGACGTAGTATATT+CGG | + | chr3.1:32089453-32089472 | None:intergenic | 40.0% | |
CTGCAGGTAGAAGTAAATCA+AGG | + | chr3.1:32086264-32086283 | None:intergenic | 40.0% | |
CTTAAGGTGGGTCATCTAAA+TGG | + | chr3.1:32088474-32088493 | None:intergenic | 40.0% | |
CTTGATGGGAATTGTTTGGT+GGG | + | chr3.1:32089275-32089294 | None:intergenic | 40.0% | |
GAAAAAGACTCAAGCTTCGA+AGG | + | chr3.1:32089532-32089551 | None:intergenic | 40.0% | |
GAAGTTGTGTCCAATTCTGT+GGG | - | chr3.1:32086424-32086443 | MS.gene69496:CDS | 40.0% | |
GATGCAAAAGGCAAAATGGA+TGG | - | chr3.1:32088576-32088595 | MS.gene69496:intron | 40.0% | |
GCAACTTCATTAAAGTGTGG+TGG | - | chr3.1:32089166-32089185 | MS.gene69496:intron | 40.0% | |
GCAGTCCAGGTATAAAACTA+AGG | - | chr3.1:32086589-32086608 | MS.gene69496:CDS | 40.0% | |
GCATAATATATGCAAGGTCC+GGG | - | chr3.1:32086767-32086786 | MS.gene69496:CDS | 40.0% | |
GGGAATGTACATATCGTCAA+GGG | + | chr3.1:32089380-32089399 | None:intergenic | 40.0% | |
GGTAGATGCAAAAGGCAAAA+TGG | - | chr3.1:32088572-32088591 | MS.gene69496:intron | 40.0% | |
GTTATTGTGTTGGGCTTGAT+GGG | + | chr3.1:32089289-32089308 | None:intergenic | 40.0% | |
GTTCTTTCTATCCCATTTGG+CGG | - | chr3.1:32089712-32089731 | MS.gene69496:intron | 40.0% | |
GTTGTCTTAGAAAACGTGGT+TGG | - | chr3.1:32087560-32087579 | MS.gene69496:intron | 40.0% | |
GTTTGTGTCAGTAGCAACAA+CGG | - | chr3.1:32089795-32089814 | MS.gene69496:CDS | 40.0% | |
TACTGTGTCATCCATCATAC+AGG | - | chr3.1:32088317-32088336 | MS.gene69496:intron | 40.0% | |
TATGGTTGTGTCTCTCAAGA+AGG | - | chr3.1:32086360-32086379 | MS.gene69496:CDS | 40.0% | |
TATTGCCAAAATGGGCATAG+TGG | - | chr3.1:32089609-32089628 | MS.gene69496:intron | 40.0% | |
TATTGGGAGAAAGTCTTGGT+TGG | - | chr3.1:32088380-32088399 | MS.gene69496:intron | 40.0% | |
TCCACTGTCTATTGGATACA+AGG | - | chr3.1:32088439-32088458 | MS.gene69496:intron | 40.0% | |
TGAAGTTGTGTCCAATTCTG+TGG | - | chr3.1:32086423-32086442 | MS.gene69496:CDS | 40.0% | |
TGATGAAACTTGGATGACGA+GGG | + | chr3.1:32089351-32089370 | None:intergenic | 40.0% | |
TGATTTACTTCTACCTGCAG+TGG | - | chr3.1:32086264-32086283 | MS.gene69496:CDS | 40.0% | |
TGGGAATGTACATATCGTCA+AGG | + | chr3.1:32089381-32089400 | None:intergenic | 40.0% | |
TGTACATATCGTCAAGGGAA+GGG | + | chr3.1:32089375-32089394 | None:intergenic | 40.0% | |
TGTCTATTGGGAGAAAGTCT+TGG | - | chr3.1:32088376-32088395 | MS.gene69496:intron | 40.0% | |
TGTGACAAATGAAGAGGTAG+TGG | - | chr3.1:32086195-32086214 | MS.gene69496:CDS | 40.0% | |
TGTGAGTGTGACAAATGAAG+AGG | - | chr3.1:32086189-32086208 | MS.gene69496:CDS | 40.0% | |
TGTTATTGTGTTGGGCTTGA+TGG | + | chr3.1:32089290-32089309 | None:intergenic | 40.0% | |
TTCTTTCTATCCCATTTGGC+GGG | - | chr3.1:32089713-32089732 | MS.gene69496:intron | 40.0% | |
TTGATGAAACTTGGATGACG+AGG | + | chr3.1:32089352-32089371 | None:intergenic | 40.0% | |
TTGGCGAAGATTTATTGTGG+TGG | - | chr3.1:32089874-32089893 | MS.gene69496:CDS | 40.0% | |
TTTGTGAGATAGGGCTACAA+CGG | + | chr3.1:32088282-32088301 | None:intergenic | 40.0% | |
TTTGTTCCAAAGAGGAAGCA+TGG | - | chr3.1:32086559-32086578 | MS.gene69496:CDS | 40.0% | |
! | AGAAAGTCTTGGTTGGTCAT+GGG | - | chr3.1:32088387-32088406 | MS.gene69496:intron | 40.0% |
! | AGTCTTTTTCCGCTTACTTG+TGG | - | chr3.1:32089542-32089561 | MS.gene69496:intron | 40.0% |
! | ATCAACCACTATGCCCATTT+TGG | + | chr3.1:32089617-32089636 | None:intergenic | 40.0% |
! | CCCCGGATTTAAATCGTTTT+TGG | + | chr3.1:32086812-32086831 | None:intergenic | 40.0% |
! | CCCTTTAAGGAATGGTGATT+GGG | - | chr3.1:32090041-32090060 | MS.gene69496:CDS | 40.0% |
! | CTTCTTAGGGCTCATTGATT+GGG | - | chr3.1:32089825-32089844 | MS.gene69496:CDS | 40.0% |
! | GCAACGATGACACACTATTT+TGG | - | chr3.1:32089685-32089704 | MS.gene69496:intron | 40.0% |
! | GGATTGGCGAAGATTTATTG+TGG | - | chr3.1:32089871-32089890 | MS.gene69496:CDS | 40.0% |
! | GGGTTGGATAATAATGGAGT+TGG | - | chr3.1:32088885-32088904 | MS.gene69496:intron | 40.0% |
! | GTTAGCGGTTGTTATTGTGT+TGG | + | chr3.1:32089299-32089318 | None:intergenic | 40.0% |
! | TGCATCCTACCATTTTCCTT+GGG | - | chr3.1:32089984-32090003 | MS.gene69496:CDS | 40.0% |
! | TGTTAACCTCCGATTTCTAG+AGG | - | chr3.1:32087690-32087709 | MS.gene69496:intron | 40.0% |
! | TTGCATCCTACCATTTTCCT+TGG | - | chr3.1:32089983-32090002 | MS.gene69496:CDS | 40.0% |
!! | AAGACAAGGTGGATTTTGGA+TGG | - | chr3.1:32089947-32089966 | MS.gene69496:CDS | 40.0% |
!! | AATTGTTTGGTGGGCTATCT+CGG | + | chr3.1:32089266-32089285 | None:intergenic | 40.0% |
!! | AGACAAGGTGGATTTTGGAT+GGG | - | chr3.1:32089948-32089967 | MS.gene69496:CDS | 40.0% |
!! | GAGTTGGTTGATAAGCCATT+AGG | - | chr3.1:32089748-32089767 | MS.gene69496:CDS | 40.0% |
!!! | AAATCCATCGTTTTTGGTGG+TGG | + | chr3.1:32086847-32086866 | None:intergenic | 40.0% |
!!! | GCATGTTGGTTTTGTGAGAT+AGG | + | chr3.1:32088292-32088311 | None:intergenic | 40.0% |
!!! | TCACCCCTTAGTTTTATACC+TGG | + | chr3.1:32086597-32086616 | None:intergenic | 40.0% |
AACACCTCAAATAGGGGTTC+AGG | + | chr3.1:32088926-32088945 | None:intergenic | 45.0% | |
AAGATTTCCGGAAGACAAGG+TGG | - | chr3.1:32089936-32089955 | MS.gene69496:CDS | 45.0% | |
AAGTACTAGGGTGGAAGTTG+TGG | + | chr3.1:32087526-32087545 | None:intergenic | 45.0% | |
AGCGACAATTAACTGCTGCT+AGG | - | chr3.1:32088758-32088777 | MS.gene69496:intron | 45.0% | |
CATCATACAGGCTACAACCA+TGG | - | chr3.1:32088329-32088348 | MS.gene69496:intron | 45.0% | |
CATGGTTGTAGCCTGTATGA+TGG | + | chr3.1:32088331-32088350 | None:intergenic | 45.0% | |
CCAAAATCCACCTTGTCTTC+CGG | + | chr3.1:32089946-32089965 | None:intergenic | 45.0% | |
CGACAATTAACTGCTGCTAG+GGG | - | chr3.1:32088760-32088779 | MS.gene69496:intron | 45.0% | |
CTAACACAACCCCGCAAAAT+CGG | - | chr3.1:32087585-32087604 | MS.gene69496:intron | 45.0% | |
GACACAGTACACTTGCATGT+TGG | + | chr3.1:32088306-32088325 | None:intergenic | 45.0% | |
GACTTTCTCCCAATAGACAG+TGG | + | chr3.1:32088375-32088394 | None:intergenic | 45.0% | |
GCCTTGTATCCAATAGACAG+TGG | + | chr3.1:32088443-32088462 | None:intergenic | 45.0% | |
GCGACAATTAACTGCTGCTA+GGG | - | chr3.1:32088759-32088778 | MS.gene69496:intron | 45.0% | |
GCTTGATGGGAATTGTTTGG+TGG | + | chr3.1:32089276-32089295 | None:intergenic | 45.0% | |
GGCAGCCAATGTTCTTGTAT+TGG | + | chr3.1:32086232-32086251 | None:intergenic | 45.0% | |
GTCTTCCGGAAATCTTTGTC+CGG | + | chr3.1:32089932-32089951 | None:intergenic | 45.0% | |
GTCTTCCGGACAAAGATTTC+CGG | - | chr3.1:32089924-32089943 | MS.gene69496:CDS | 45.0% | |
TCACCATTCCTTAAAGGGCT+TGG | + | chr3.1:32090039-32090058 | None:intergenic | 45.0% | |
TGAGCTTAGCTCAGTTGGTT+TGG | - | chr3.1:32087122-32087141 | MS.gene69496:CDS | 45.0% | |
TGGAAACGATAGTAGCGATG+AGG | - | chr3.1:32089651-32089670 | MS.gene69496:intron | 45.0% | |
TGGGCTTGATGGGAATTGTT+TGG | + | chr3.1:32089279-32089298 | None:intergenic | 45.0% | |
TTCCGCTTACTTGTGGAAGT+TGG | - | chr3.1:32089549-32089568 | MS.gene69496:intron | 45.0% | |
TTCCTTAAAGGGCTTGGCAT+TGG | + | chr3.1:32090033-32090052 | None:intergenic | 45.0% | |
! | AGCCTCGTTCCTCTAGAAAT+CGG | + | chr3.1:32087702-32087721 | None:intergenic | 45.0% |
! | ATGCACCTTGTTATCCGACA+AGG | - | chr3.1:32088545-32088564 | MS.gene69496:intron | 45.0% |
! | ATGCCAAGCCCTTTAAGGAA+TGG | - | chr3.1:32090033-32090052 | MS.gene69496:CDS | 45.0% |
! | CTCGCTGCTTTAGCTAACAA+TGG | - | chr3.1:32089496-32089515 | MS.gene69496:intron | 45.0% |
! | GAGAAAGTCTTGGTTGGTCA+TGG | - | chr3.1:32088386-32088405 | MS.gene69496:intron | 45.0% |
! | GCATCCTACCATTTTCCTTG+GGG | - | chr3.1:32089985-32090004 | MS.gene69496:CDS | 45.0% |
! | GCCCTTTAAGGAATGGTGAT+TGG | - | chr3.1:32090040-32090059 | MS.gene69496:CDS | 45.0% |
! | GCTAAGTAACGGCTTTGTAG+CGG | + | chr3.1:32089431-32089450 | None:intergenic | 45.0% |
! | GTTGATGGAAGAAGGAGACT+TGG | - | chr3.1:32089631-32089650 | MS.gene69496:intron | 45.0% |
! | TACAAGGTATTCGTTGACGG+CGG | + | chr3.1:32087376-32087395 | None:intergenic | 45.0% |
! | TGCACCTTGTTATCCGACAA+GGG | - | chr3.1:32088546-32088565 | MS.gene69496:intron | 45.0% |
! | TGTGTCTCTCAAGAAGGCAT+TGG | - | chr3.1:32086366-32086385 | MS.gene69496:CDS | 45.0% |
! | TTAACTGCTGCTAGGGGTAT+TGG | - | chr3.1:32088766-32088785 | MS.gene69496:intron | 45.0% |
! | TTAAGAGTCCCACATCGGTT+AGG | + | chr3.1:32087661-32087680 | None:intergenic | 45.0% |
!! | AGGGAAGGGTTGATGAAACT+TGG | + | chr3.1:32089361-32089380 | None:intergenic | 45.0% |
!! | CAAATTGGGTTGGTTCGGTA+TGG | - | chr3.1:32088110-32088129 | MS.gene69496:intron | 45.0% |
!! | GACAAGGTGGATTTTGGATG+GGG | - | chr3.1:32089949-32089968 | MS.gene69496:CDS | 45.0% |
!! | GCATAGTGGTTGATGGAAGA+AGG | - | chr3.1:32089623-32089642 | MS.gene69496:intron | 45.0% |
!! | GGTTGATAAGCCATTAGGGT+GGG | - | chr3.1:32089753-32089772 | MS.gene69496:CDS | 45.0% |
!! | TCTCAAGAAGGCATTGGCTA+AGG | - | chr3.1:32086372-32086391 | MS.gene69496:CDS | 45.0% |
!! | TGGTTGATAAGCCATTAGGG+TGG | - | chr3.1:32089752-32089771 | MS.gene69496:CDS | 45.0% |
!!! | AAATCGTTTTTGGTGGTGGC+CGG | + | chr3.1:32086802-32086821 | None:intergenic | 45.0% |
!!! | GAAGGCATTGGCTAAGGTTT+TGG | - | chr3.1:32086378-32086397 | MS.gene69496:CDS | 45.0% |
!!! | GGTTCAGGTTGGACCAATTT+TGG | + | chr3.1:32088911-32088930 | None:intergenic | 45.0% |
AACACACCAACATCCACTGC+AGG | + | chr3.1:32086280-32086299 | None:intergenic | 50.0% | |
AAGGGGGTGGTAGATGCAAA+AGG | - | chr3.1:32088564-32088583 | MS.gene69496:intron | 50.0% | |
ACAAAAGCCGGCCCTTCATT+GGG | + | chr3.1:32089901-32089920 | None:intergenic | 50.0% | |
ACCACCCCAAGGAAAATGGT+AGG | + | chr3.1:32089992-32090011 | None:intergenic | 50.0% | |
ACGATAGTAGCGATGAGGAC+CGG | - | chr3.1:32089656-32089675 | MS.gene69496:intron | 50.0% | |
AGGAGGAGGGAGTTTGGAAA+TGG | + | chr3.1:32089401-32089420 | None:intergenic | 50.0% | |
AGTCCAACTCCTAACCGATG+TGG | - | chr3.1:32087649-32087668 | MS.gene69496:intron | 50.0% | |
ATTGTGGTGGCCCCAATGAA+GGG | - | chr3.1:32089887-32089906 | MS.gene69496:CDS | 50.0% | |
ATTTGGCGGGAAATCAGTGG+AGG | - | chr3.1:32089726-32089745 | MS.gene69496:CDS | 50.0% | |
CCAACCTGAACCCCTATTTG+AGG | - | chr3.1:32088919-32088938 | MS.gene69496:intron | 50.0% | |
CCTCAAATAGGGGTTCAGGT+TGG | + | chr3.1:32088922-32088941 | None:intergenic | 50.0% | |
CTCAAGCTTCGAAGGCTTAG+TGG | + | chr3.1:32089524-32089543 | None:intergenic | 50.0% | |
CTCAGGTTCACCCACAGAAT+TGG | + | chr3.1:32086437-32086456 | None:intergenic | 50.0% | |
CTTCACCACCCCAAGGAAAA+TGG | + | chr3.1:32089996-32090015 | None:intergenic | 50.0% | |
CTTCTACCTGCAGTGGATGT+TGG | - | chr3.1:32086271-32086290 | MS.gene69496:CDS | 50.0% | |
GCTAATGCAGCCACAAGGAA+TGG | - | chr3.1:32089574-32089593 | MS.gene69496:intron | 50.0% | |
GGACACAACTTCACCTGCAA+AGG | + | chr3.1:32086416-32086435 | None:intergenic | 50.0% | |
GGAGGAGGGAGTTTGGAAAT+GGG | + | chr3.1:32089400-32089419 | None:intergenic | 50.0% | |
GTCCAACTCCTAACCGATGT+GGG | - | chr3.1:32087650-32087669 | MS.gene69496:intron | 50.0% | |
GTGTCATCGTTGCTTCTCTC+CGG | + | chr3.1:32089678-32089697 | None:intergenic | 50.0% | |
TATTGTGGTGGCCCCAATGA+AGG | - | chr3.1:32089886-32089905 | MS.gene69496:CDS | 50.0% | |
TCATCAACCACCCACCCTAA+TGG | + | chr3.1:32089766-32089785 | None:intergenic | 50.0% | |
TGAGCTTAGCTCAGCTGGTT+TGG | - | chr3.1:32086739-32086758 | MS.gene69496:CDS | 50.0% | |
TGATAAGCCATTAGGGTGGG+TGG | - | chr3.1:32089756-32089775 | MS.gene69496:CDS | 50.0% | |
TGCCAATGCCAAGCCCTTTA+AGG | - | chr3.1:32090028-32090047 | MS.gene69496:CDS | 50.0% | |
TGGTTGCTAATGCAGCCACA+AGG | - | chr3.1:32089569-32089588 | MS.gene69496:intron | 50.0% | |
TGTGTCAGTAGCAACAACGG+AGG | - | chr3.1:32089798-32089817 | MS.gene69496:CDS | 50.0% | |
TTCCAAACTCCCTCCTCCTT+CGG | - | chr3.1:32089402-32089421 | MS.gene69496:intron | 50.0% | |
! | AAGTAACGGCTTTGTAGCGG+TGG | + | chr3.1:32089428-32089447 | None:intergenic | 50.0% |
! | ATTAGGGTGGGTGGTTGATG+AGG | - | chr3.1:32089765-32089784 | MS.gene69496:CDS | 50.0% |
! | CACCTTGTTATCCGACAAGG+GGG | - | chr3.1:32088548-32088567 | MS.gene69496:intron | 50.0% |
! | CGATTTTGCGGGGTTGTGTT+AGG | + | chr3.1:32087587-32087606 | None:intergenic | 50.0% |
! | CTCCGATTTCTAGAGGAACG+AGG | - | chr3.1:32087697-32087716 | MS.gene69496:intron | 50.0% |
! | CTCGTTCCTCTAGAAATCGG+AGG | + | chr3.1:32087699-32087718 | None:intergenic | 50.0% |
! | CTTAGGGCTCATTGATTGGG+TGG | - | chr3.1:32089828-32089847 | MS.gene69496:CDS | 50.0% |
! | GCACCTTGTTATCCGACAAG+GGG | - | chr3.1:32088547-32088566 | MS.gene69496:intron | 50.0% |
! | TACAGGGTATTCGTTGACGG+CGG | + | chr3.1:32087473-32087492 | None:intergenic | 50.0% |
! | TCCTACCATTTTCCTTGGGG+TGG | - | chr3.1:32089988-32090007 | MS.gene69496:CDS | 50.0% |
!! | ACAACGGAGGAGCACTTCTT+AGG | - | chr3.1:32089811-32089830 | MS.gene69496:CDS | 50.0% |
!! | ACCTCACAAGCCGATTTTGC+GGG | + | chr3.1:32087598-32087617 | None:intergenic | 50.0% |
!! | CAAAATCGGCTTGTGAGGTG+AGG | - | chr3.1:32087599-32087618 | MS.gene69496:intron | 50.0% |
!! | CAACGGAGGAGCACTTCTTA+GGG | - | chr3.1:32089812-32089831 | MS.gene69496:CDS | 50.0% |
!! | CAAGCGTTGGAGCTTCTCTA+CGG | + | chr3.1:32089470-32089489 | None:intergenic | 50.0% |
!! | CACCTCACAAGCCGATTTTG+CGG | + | chr3.1:32087599-32087618 | None:intergenic | 50.0% |
!! | CCACTGATTTCCCGCCAAAT+GGG | + | chr3.1:32089726-32089745 | None:intergenic | 50.0% |
!! | CCGGAAGACAAGGTGGATTT+TGG | - | chr3.1:32089943-32089962 | MS.gene69496:CDS | 50.0% |
!! | TCCACTGATTTCCCGCCAAA+TGG | + | chr3.1:32089727-32089746 | None:intergenic | 50.0% |
!!! | AATCGTTTTTGGTGGTGGCC+GGG | + | chr3.1:32086801-32086820 | None:intergenic | 50.0% |
AACTTGGATGACGAGGGCTC+AGG | + | chr3.1:32089345-32089364 | None:intergenic | 55.0% | |
AGCACGCCATGCTTCCTCTT+TGG | + | chr3.1:32086568-32086587 | None:intergenic | 55.0% | |
AGGAGGGAGCGACGAAAACA+TGG | + | chr3.1:32089325-32089344 | None:intergenic | 55.0% | |
ATCTTCGCCAATCCAGGGAC+AGG | + | chr3.1:32089865-32089884 | None:intergenic | 55.0% | |
CAAAAGCCGGCCCTTCATTG+GGG | + | chr3.1:32089900-32089919 | None:intergenic | 55.0% | |
CACAAAAGCCGGCCCTTCAT+TGG | + | chr3.1:32089902-32089921 | None:intergenic | 55.0% | |
CACCCCCTTGTCGGATAACA+AGG | + | chr3.1:32088553-32088572 | None:intergenic | 55.0% | |
CAGCGAGTGATTGCAAGCGT+TGG | + | chr3.1:32089483-32089502 | None:intergenic | 55.0% | |
CCAACTGAGCTAAGCTCACG+AGG | + | chr3.1:32087120-32087139 | None:intergenic | 55.0% | |
CCCATTTGGCGGGAAATCAG+TGG | - | chr3.1:32089723-32089742 | MS.gene69496:intron | 55.0% | |
CCGGAAGACACCACAAAAGC+CGG | + | chr3.1:32089913-32089932 | None:intergenic | 55.0% | |
CCTCGTGAGCTTAGCTCAGT+TGG | - | chr3.1:32087117-32087136 | MS.gene69496:CDS | 55.0% | |
CGGCGGTCAAGTGATTTCAG+TGG | + | chr3.1:32087359-32087378 | None:intergenic | 55.0% | |
CGGGAAATCAGTGGAGGAGT+TGG | - | chr3.1:32089732-32089751 | MS.gene69496:CDS | 55.0% | |
CTATCTCGGCCCATGATACG+AGG | + | chr3.1:32089252-32089271 | None:intergenic | 55.0% | |
TAAATCCGGGGTTCGAACCC+CGG | - | chr3.1:32086821-32086840 | MS.gene69496:CDS | 55.0% | |
TAACCAGCTTCACCACCCCA+AGG | + | chr3.1:32090003-32090022 | None:intergenic | 55.0% | |
TAGGGTGGAAGTTGTGGTGC+TGG | + | chr3.1:32087520-32087539 | None:intergenic | 55.0% | |
TGCATCTACCACCCCCTTGT+CGG | + | chr3.1:32088562-32088581 | None:intergenic | 55.0% | |
TTTCCTTGGGGTGGTGAAGC+TGG | - | chr3.1:32089997-32090016 | MS.gene69496:CDS | 55.0% | |
! | CCGGCTTTTGTGGTGTCTTC+CGG | - | chr3.1:32089910-32089929 | MS.gene69496:CDS | 55.0% |
! | CTTGTTATCCGACAAGGGGG+TGG | - | chr3.1:32088551-32088570 | MS.gene69496:intron | 55.0% |
! | GTCCCACATCGGTTAGGAGT+TGG | + | chr3.1:32087655-32087674 | None:intergenic | 55.0% |
!! | CAATGAAGGGCCGGCTTTTG+TGG | - | chr3.1:32089900-32089919 | MS.gene69496:CDS | 55.0% |
!! | CCTCACAAGCCGATTTTGCG+GGG | + | chr3.1:32087597-32087616 | None:intergenic | 55.0% |
!! | GAAGTTGTGGTGCTGGCTCA+CGG | + | chr3.1:32087513-32087532 | None:intergenic | 55.0% |
!!! | ATCGTTTTTGGTGGTGGCCG+GGG | + | chr3.1:32086800-32086819 | None:intergenic | 55.0% |
!!! | CATCGTTTTTGGTGGTGGCC+GGG | + | chr3.1:32086842-32086861 | None:intergenic | 55.0% |
!!! | CCATCGTTTTTGGTGGTGGC+CGG | + | chr3.1:32086843-32086862 | None:intergenic | 55.0% |
ACACCGACCTGTCCCTGGAT+TGG | - | chr3.1:32089855-32089874 | MS.gene69496:CDS | 60.0% | |
CCAGCTGAGCTAAGCTCACG+AGG | + | chr3.1:32086737-32086756 | None:intergenic | 60.0% | |
CCGGCCACCACCAAAAACGA+TGG | - | chr3.1:32086799-32086818 | MS.gene69496:CDS | 60.0% | |
CCTCGTGAGCTTAGCTCAGC+TGG | - | chr3.1:32086734-32086753 | MS.gene69496:CDS | 60.0% | |
TCGCCAATCCAGGGACAGGT+CGG | + | chr3.1:32089861-32089880 | None:intergenic | 60.0% | |
TGGATGACGAGGGCTCAGGA+GGG | + | chr3.1:32089341-32089360 | None:intergenic | 60.0% | |
TTGGATGACGAGGGCTCAGG+AGG | + | chr3.1:32089342-32089361 | None:intergenic | 60.0% | |
TTTGTAGCGGTGGCCGAAGG+AGG | + | chr3.1:32089418-32089437 | None:intergenic | 60.0% | |
!! | CCCCGCAAAATCGGCTTGTG+AGG | - | chr3.1:32087594-32087613 | MS.gene69496:intron | 60.0% |
AAGGTCCGGGGTTCGAACCC+CGG | - | chr3.1:32086780-32086799 | MS.gene69496:CDS | 65.0% | |
GAAGCACACCGACCTGTCCC+TGG | - | chr3.1:32089850-32089869 | MS.gene69496:CDS | 65.0% | |
GGCCGAAGGAGGAGGGAGTT+TGG | + | chr3.1:32089407-32089426 | None:intergenic | 65.0% | |
TAGCGGTGGCCGAAGGAGGA+GGG | + | chr3.1:32089414-32089433 | None:intergenic | 65.0% | |
TGGTGGCCCCAATGAAGGGC+CGG | - | chr3.1:32089891-32089910 | MS.gene69496:CDS | 65.0% | |
! | GGCTTTGTAGCGGTGGCCGA+AGG | + | chr3.1:32089421-32089440 | None:intergenic | 65.0% |
!! | TGCTGGCTCACGGCAGAGCT+TGG | + | chr3.1:32087503-32087522 | None:intergenic | 65.0% |
GCATGGCGTGCTCGCAGTCC+AGG | - | chr3.1:32086576-32086595 | MS.gene69496:CDS | 70.0% | |
GTAGCGGTGGCCGAAGGAGG+AGG | + | chr3.1:32089415-32089434 | None:intergenic | 70.0% | |
GGTGGCCGGGGTTCGAACCC+CGG | + | chr3.1:32086788-32086807 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 32086160 | 32090161 | 32086160 | ID=MS.gene69496 |
chr3.1 | mRNA | 32086160 | 32090161 | 32086160 | ID=MS.gene69496.t1;Parent=MS.gene69496 |
chr3.1 | exon | 32089724 | 32090161 | 32089724 | ID=MS.gene69496.t1.exon1;Parent=MS.gene69496.t1 |
chr3.1 | CDS | 32089724 | 32090161 | 32089724 | ID=cds.MS.gene69496.t1;Parent=MS.gene69496.t1 |
chr3.1 | exon | 32086160 | 32087155 | 32086160 | ID=MS.gene69496.t1.exon2;Parent=MS.gene69496.t1 |
chr3.1 | CDS | 32086160 | 32087155 | 32086160 | ID=cds.MS.gene69496.t1;Parent=MS.gene69496.t1 |
Gene Sequence |
Protein sequence |