Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47716.t1 | XP_003617373.1 | 93 | 473 | 33 | 0 | 1 | 473 | 1 | 473 | 1.10E-258 | 902.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47716.t1 | Q8GSM7 | 24.6 | 464 | 296 | 15 | 10 | 456 | 3 | 429 | 3.6e-29 | 131.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47716.t1 | G7K3A7 | 93.0 | 473 | 33 | 0 | 1 | 473 | 1 | 473 | 7.7e-259 | 902.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47716.t1 | MTR_5g090880 | 93.658 | 473 | 30 | 0 | 1 | 473 | 1 | 473 | 0.0 | 902 |
MS.gene47716.t1 | MTR_5g090830 | 80.380 | 474 | 89 | 3 | 1 | 473 | 1 | 471 | 0.0 | 793 |
MS.gene47716.t1 | MTR_5g090810 | 78.903 | 474 | 96 | 3 | 1 | 473 | 1 | 471 | 0.0 | 780 |
MS.gene47716.t1 | MTR_3g450710 | 62.839 | 479 | 159 | 7 | 1 | 471 | 1 | 468 | 0.0 | 581 |
MS.gene47716.t1 | MTR_3g450690 | 61.250 | 480 | 169 | 6 | 1 | 471 | 1 | 472 | 0.0 | 581 |
MS.gene47716.t1 | MTR_5g026320 | 35.394 | 469 | 272 | 13 | 7 | 471 | 15 | 456 | 2.24e-74 | 241 |
MS.gene47716.t1 | MTR_2g064495 | 26.190 | 462 | 288 | 16 | 10 | 456 | 3 | 426 | 1.89e-36 | 139 |
MS.gene47716.t1 | MTR_2g105330 | 26.190 | 462 | 288 | 16 | 10 | 456 | 3 | 426 | 3.62e-36 | 139 |
MS.gene47716.t1 | MTR_8g075610 | 25.828 | 453 | 284 | 16 | 17 | 456 | 1 | 414 | 5.98e-36 | 138 |
MS.gene47716.t1 | MTR_4g007540 | 26.144 | 459 | 285 | 16 | 10 | 452 | 3 | 423 | 3.95e-35 | 136 |
MS.gene47716.t1 | MTR_8g096530 | 26.196 | 439 | 274 | 16 | 31 | 459 | 28 | 426 | 1.04e-30 | 124 |
MS.gene47716.t1 | MTR_3g098980 | 26.904 | 394 | 239 | 14 | 31 | 414 | 35 | 389 | 1.84e-27 | 114 |
MS.gene47716.t1 | MTR_1g040215 | 26.368 | 402 | 233 | 13 | 64 | 437 | 61 | 427 | 3.86e-27 | 114 |
MS.gene47716.t1 | MTR_3g049150 | 24.879 | 414 | 273 | 14 | 60 | 456 | 48 | 440 | 4.48e-27 | 113 |
MS.gene47716.t1 | MTR_7g027175 | 26.241 | 423 | 263 | 17 | 4 | 415 | 9 | 393 | 2.42e-26 | 111 |
MS.gene47716.t1 | MTR_7g085990 | 26.823 | 384 | 231 | 15 | 61 | 414 | 49 | 412 | 4.68e-26 | 110 |
MS.gene47716.t1 | MTR_7g114560 | 24.812 | 399 | 256 | 12 | 64 | 450 | 62 | 428 | 3.90e-25 | 108 |
MS.gene47716.t1 | MTR_1g040175 | 25.123 | 406 | 245 | 13 | 64 | 443 | 61 | 433 | 5.58e-25 | 107 |
MS.gene47716.t1 | MTR_7g114550 | 25.564 | 399 | 247 | 14 | 67 | 450 | 65 | 428 | 9.02e-25 | 107 |
MS.gene47716.t1 | MTR_4g127650 | 23.195 | 457 | 305 | 12 | 28 | 466 | 28 | 456 | 1.81e-24 | 105 |
MS.gene47716.t1 | MTR_7g086000 | 26.667 | 375 | 221 | 14 | 67 | 413 | 60 | 408 | 7.94e-24 | 104 |
MS.gene47716.t1 | MTR_7g114490 | 24.634 | 410 | 261 | 14 | 64 | 459 | 62 | 437 | 2.36e-23 | 103 |
MS.gene47716.t1 | MTR_4g097090 | 25.000 | 456 | 299 | 16 | 28 | 466 | 27 | 456 | 3.86e-23 | 102 |
MS.gene47716.t1 | MTR_1g081660 | 24.814 | 403 | 254 | 17 | 64 | 452 | 70 | 437 | 6.82e-23 | 101 |
MS.gene47716.t1 | MTR_5g076700 | 25.926 | 405 | 239 | 17 | 67 | 450 | 65 | 429 | 6.91e-23 | 101 |
MS.gene47716.t1 | MTR_7g114470 | 25.505 | 396 | 242 | 15 | 64 | 435 | 63 | 429 | 9.09e-23 | 100 |
MS.gene47716.t1 | MTR_7g085930 | 25.459 | 381 | 240 | 13 | 61 | 414 | 53 | 416 | 7.91e-22 | 98.2 |
MS.gene47716.t1 | MTR_3g026950 | 24.289 | 457 | 304 | 12 | 10 | 447 | 2 | 435 | 1.37e-21 | 97.4 |
MS.gene47716.t1 | MTR_7g114520 | 26.923 | 364 | 223 | 13 | 64 | 416 | 63 | 394 | 1.45e-21 | 97.4 |
MS.gene47716.t1 | MTR_7g084940 | 26.526 | 426 | 250 | 17 | 6 | 413 | 12 | 392 | 4.24e-19 | 89.7 |
MS.gene47716.t1 | MTR_1g040320 | 23.284 | 408 | 214 | 14 | 64 | 443 | 61 | 397 | 2.21e-18 | 87.4 |
MS.gene47716.t1 | MTR_1g053315 | 23.284 | 408 | 254 | 16 | 29 | 414 | 40 | 410 | 8.15e-18 | 86.3 |
MS.gene47716.t1 | MTR_1g040195 | 24.796 | 367 | 215 | 14 | 97 | 437 | 71 | 402 | 1.08e-17 | 85.5 |
MS.gene47716.t1 | MTR_3g465990 | 25.061 | 411 | 255 | 15 | 49 | 440 | 50 | 426 | 2.81e-17 | 84.3 |
MS.gene47716.t1 | MTR_3g465980 | 25.519 | 337 | 211 | 10 | 49 | 369 | 50 | 362 | 3.56e-16 | 80.9 |
MS.gene47716.t1 | MTR_3g086020 | 24.823 | 423 | 254 | 21 | 6 | 417 | 1 | 370 | 3.71e-16 | 80.9 |
MS.gene47716.t1 | MTR_8g079980 | 23.836 | 365 | 219 | 11 | 67 | 414 | 59 | 381 | 5.64e-16 | 80.5 |
MS.gene47716.t1 | MTR_1g040315 | 26.457 | 223 | 141 | 6 | 64 | 278 | 61 | 268 | 1.08e-15 | 79.3 |
MS.gene47716.t1 | MTR_4g055170 | 23.716 | 409 | 251 | 13 | 67 | 449 | 69 | 442 | 1.26e-15 | 79.3 |
MS.gene47716.t1 | MTR_3g101900 | 23.885 | 381 | 232 | 13 | 67 | 425 | 66 | 410 | 8.75e-15 | 76.6 |
MS.gene47716.t1 | MTR_3g070170 | 22.871 | 411 | 258 | 15 | 60 | 439 | 59 | 441 | 1.36e-14 | 76.3 |
MS.gene47716.t1 | MTR_7g056087 | 22.796 | 465 | 299 | 17 | 10 | 453 | 4 | 429 | 2.00e-14 | 75.5 |
MS.gene47716.t1 | MTR_2g015430 | 23.210 | 405 | 267 | 16 | 21 | 415 | 15 | 385 | 2.14e-14 | 75.5 |
MS.gene47716.t1 | MTR_3g101930 | 24.868 | 378 | 218 | 15 | 62 | 412 | 65 | 403 | 4.98e-14 | 74.3 |
MS.gene47716.t1 | MTR_8g467580 | 23.853 | 436 | 249 | 20 | 10 | 414 | 3 | 386 | 5.08e-14 | 74.3 |
MS.gene47716.t1 | MTR_4g022720 | 26.087 | 368 | 217 | 14 | 67 | 414 | 55 | 387 | 7.39e-14 | 73.9 |
MS.gene47716.t1 | MTR_3g112180 | 23.797 | 395 | 228 | 14 | 67 | 429 | 61 | 414 | 1.97e-13 | 72.4 |
MS.gene47716.t1 | MTR_3g101960 | 23.118 | 372 | 226 | 12 | 63 | 412 | 64 | 397 | 2.19e-13 | 72.4 |
MS.gene47716.t1 | MTR_3g088420 | 23.423 | 444 | 263 | 18 | 36 | 455 | 32 | 422 | 9.69e-13 | 70.5 |
MS.gene47716.t1 | MTR_4g022290 | 24.538 | 379 | 211 | 16 | 67 | 414 | 60 | 394 | 1.23e-12 | 70.1 |
MS.gene47716.t1 | MTR_7g114510 | 24.000 | 275 | 177 | 8 | 143 | 416 | 9 | 252 | 4.31e-12 | 67.4 |
MS.gene47716.t1 | MTR_6g053810 | 25.633 | 316 | 195 | 13 | 67 | 365 | 71 | 363 | 4.61e-12 | 68.2 |
MS.gene47716.t1 | MTR_4g094828 | 22.395 | 451 | 271 | 17 | 36 | 455 | 37 | 439 | 1.23e-11 | 67.0 |
MS.gene47716.t1 | MTR_3g465930 | 23.547 | 327 | 202 | 9 | 67 | 372 | 69 | 368 | 2.37e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47716.t1 | AT1G78990 | 54.292 | 466 | 188 | 9 | 8 | 471 | 11 | 453 | 5.03e-162 | 466 |
MS.gene47716.t1 | AT1G32910 | 54.797 | 469 | 186 | 9 | 8 | 471 | 11 | 458 | 1.74e-160 | 462 |
MS.gene47716.t1 | AT5G16410 | 50.633 | 474 | 196 | 12 | 8 | 471 | 34 | 479 | 1.00e-150 | 438 |
MS.gene47716.t1 | AT1G31490 | 35.639 | 477 | 254 | 15 | 8 | 471 | 4 | 440 | 8.41e-76 | 244 |
MS.gene47716.t1 | AT5G48930 | 26.681 | 461 | 288 | 16 | 10 | 456 | 3 | 427 | 3.16e-35 | 136 |
MS.gene47716.t1 | AT5G41040 | 26.329 | 395 | 245 | 13 | 31 | 415 | 38 | 396 | 5.84e-28 | 116 |
MS.gene47716.t1 | AT5G41040 | 26.329 | 395 | 245 | 13 | 31 | 415 | 54 | 412 | 7.72e-28 | 115 |
MS.gene47716.t1 | AT5G57840 | 25.270 | 463 | 288 | 15 | 10 | 452 | 3 | 427 | 1.07e-26 | 112 |
MS.gene47716.t1 | AT3G26040 | 25.463 | 432 | 241 | 19 | 10 | 414 | 3 | 380 | 5.41e-25 | 107 |
MS.gene47716.t1 | AT5G17540 | 25.541 | 462 | 270 | 19 | 4 | 440 | 3 | 415 | 1.36e-24 | 106 |
MS.gene47716.t1 | AT5G63560 | 25.893 | 448 | 252 | 18 | 8 | 425 | 5 | 402 | 1.79e-23 | 102 |
MS.gene47716.t1 | AT3G03480 | 25.000 | 464 | 274 | 17 | 6 | 437 | 15 | 436 | 6.54e-23 | 101 |
MS.gene47716.t1 | AT3G48720 | 24.784 | 464 | 299 | 16 | 3 | 456 | 2 | 425 | 2.11e-22 | 99.8 |
MS.gene47716.t1 | AT1G65450 | 26.111 | 360 | 222 | 13 | 67 | 413 | 72 | 400 | 2.75e-21 | 96.7 |
MS.gene47716.t1 | AT1G28680 | 27.475 | 404 | 242 | 20 | 26 | 415 | 22 | 388 | 4.60e-21 | 95.9 |
MS.gene47716.t1 | AT1G24430 | 26.492 | 419 | 247 | 18 | 10 | 414 | 5 | 376 | 5.68e-21 | 95.5 |
MS.gene47716.t1 | AT2G40230 | 25.432 | 405 | 243 | 14 | 62 | 448 | 54 | 417 | 1.95e-20 | 94.0 |
MS.gene47716.t1 | AT2G19070 | 22.689 | 476 | 321 | 15 | 10 | 466 | 4 | 451 | 3.74e-20 | 93.2 |
MS.gene47716.t1 | AT5G67160 | 25.814 | 430 | 245 | 19 | 64 | 473 | 53 | 428 | 4.75e-20 | 92.8 |
MS.gene47716.t1 | AT1G27620 | 22.738 | 409 | 253 | 13 | 67 | 456 | 58 | 422 | 4.05e-19 | 90.1 |
MS.gene47716.t1 | AT3G30280 | 24.318 | 403 | 249 | 14 | 27 | 414 | 25 | 386 | 1.93e-17 | 84.7 |
MS.gene47716.t1 | AT5G47950 | 23.060 | 451 | 276 | 15 | 19 | 456 | 17 | 409 | 1.02e-15 | 79.3 |
MS.gene47716.t1 | AT1G24420 | 25.882 | 425 | 253 | 14 | 6 | 414 | 1 | 379 | 3.30e-15 | 78.2 |
MS.gene47716.t1 | AT1G24420 | 25.882 | 425 | 253 | 14 | 6 | 414 | 1 | 379 | 3.30e-15 | 78.2 |
MS.gene47716.t1 | AT4G15390 | 25.887 | 282 | 159 | 10 | 27 | 292 | 27 | 274 | 9.14e-15 | 76.6 |
MS.gene47716.t1 | AT4G15390 | 25.887 | 282 | 159 | 10 | 27 | 292 | 27 | 274 | 9.14e-15 | 76.6 |
MS.gene47716.t1 | AT5G38130 | 22.704 | 392 | 243 | 14 | 61 | 430 | 73 | 426 | 2.48e-14 | 75.5 |
MS.gene47716.t1 | AT5G23970 | 23.077 | 442 | 279 | 16 | 10 | 439 | 3 | 395 | 2.82e-14 | 75.1 |
MS.gene47716.t1 | AT3G50270 | 24.064 | 374 | 229 | 16 | 63 | 414 | 58 | 398 | 5.21e-14 | 74.3 |
MS.gene47716.t1 | AT5G67150 | 25.266 | 376 | 221 | 18 | 63 | 414 | 57 | 396 | 6.53e-14 | 73.9 |
MS.gene47716.t1 | AT2G25150 | 24.065 | 428 | 250 | 14 | 16 | 414 | 19 | 400 | 1.07e-13 | 73.6 |
MS.gene47716.t1 | AT5G47980 | 22.246 | 472 | 288 | 20 | 6 | 450 | 1 | 420 | 9.00e-13 | 70.5 |
MS.gene47716.t1 | AT5G42830 | 22.933 | 375 | 236 | 14 | 61 | 415 | 58 | 399 | 2.56e-12 | 68.9 |
MS.gene47716.t1 | AT3G50300 | 23.592 | 373 | 228 | 16 | 64 | 414 | 56 | 393 | 1.08e-11 | 67.0 |
MS.gene47716.t1 | AT1G65450 | 25.191 | 262 | 160 | 10 | 157 | 413 | 6 | 236 | 4.33e-11 | 63.9 |
Find 127 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGAGTCAAAGGTAGATTT+TGG | 0.197134 | 5.3:-73089289 | MS.gene47716:CDS |
GGATGGAAGGTGGGTGTCTT+GGG | 0.229374 | 5.3:+73089896 | None:intergenic |
TGCAACAACATTTCCACTAT+TGG | 0.271768 | 5.3:+73089636 | None:intergenic |
CCGACATTTGTGGTGTCTTC+TGG | 0.272565 | 5.3:-73089322 | MS.gene47716:CDS |
GAGTTTATGAGTTCGTATTT+TGG | 0.286533 | 5.3:-73089553 | MS.gene47716:CDS |
ACACCCCACAATAGTGTTAT+TGG | 0.294608 | 5.3:+73090477 | None:intergenic |
GTTTCTTATTACGTCTTTGC+TGG | 0.306691 | 5.3:-73090427 | MS.gene47716:CDS |
TCTGATTCGGGCTTGGGTTC+AGG | 0.310598 | 5.3:+73089823 | None:intergenic |
TTAATATCTGATTCGGGCTT+GGG | 0.319670 | 5.3:+73089817 | None:intergenic |
TTTAATATCTGATTCGGGCT+TGG | 0.321191 | 5.3:+73089816 | None:intergenic |
GAAGAGCATCGACCGGTTCC+AGG | 0.324397 | 5.3:-73089388 | MS.gene47716:CDS |
TGGATGGAAGGTGGGTGTCT+TGG | 0.324811 | 5.3:+73089895 | None:intergenic |
TAAGGAATACTTGCACTTCA+TGG | 0.338830 | 5.3:-73089149 | MS.gene47716:CDS |
ATTTCTTGGGACTAATTGAT+TGG | 0.344863 | 5.3:-73089414 | MS.gene47716:CDS |
AGGATTTATTGCGGAGTTCC+TGG | 0.347311 | 5.3:-73089358 | MS.gene47716:CDS |
CAAACATGTTTCTTGTATCA+TGG | 0.350145 | 5.3:-73089996 | MS.gene47716:CDS |
TTCTGCTTTCTTGTGGAAGA+TGG | 0.357240 | 5.3:-73089677 | MS.gene47716:CDS |
TGCCAATGCCTAGTCCTAAA+AGG | 0.369732 | 5.3:-73089204 | MS.gene47716:CDS |
ATGAGATTGGTCTAAAGAAA+TGG | 0.371643 | 5.3:+73089113 | None:intergenic |
AAGAACACACCAATACTAAC+AGG | 0.372400 | 5.3:+73090535 | None:intergenic |
AAGAAACATGTTTGTAGAAT+AGG | 0.374201 | 5.3:+73090005 | None:intergenic |
GGACACGAAAGAACATTTCT+TGG | 0.384547 | 5.3:-73089428 | MS.gene47716:CDS |
TTCCCTTCAATGGTTTCCTC+TGG | 0.385000 | 5.3:+73090292 | None:intergenic |
TGGAACAAGCTTCCCTTCAA+TGG | 0.386738 | 5.3:+73090282 | None:intergenic |
AGCTGCAACTACCTCCTCTT+TGG | 0.387741 | 5.3:+73090615 | None:intergenic |
ACATGGTGTGCTTGCTGTTC+AGG | 0.388373 | 5.3:-73090251 | MS.gene47716:intron |
ATTCCTTGTGGTGGTGATGC+TGG | 0.393172 | 5.3:-73089235 | MS.gene47716:CDS |
TTACGTCTTTGCTGGTGAAA+TGG | 0.396605 | 5.3:-73090419 | MS.gene47716:CDS |
TCGGGCTTGGGTTCAGGTGG+AGG | 0.406362 | 5.3:+73089829 | None:intergenic |
GTGGGTGTCTTGGGGTCAAA+AGG | 0.407163 | 5.3:+73089905 | None:intergenic |
CAATAAATCCTTGCCAGCCC+TGG | 0.423385 | 5.3:+73089370 | None:intergenic |
CGCTCTGTAACCCAACATAA+TGG | 0.424141 | 5.3:+73089475 | None:intergenic |
TGAGATTGGTCTAAAGAAAT+GGG | 0.424402 | 5.3:+73089114 | None:intergenic |
ATGAATCCTATGATTACTAT+TGG | 0.425230 | 5.3:-73090505 | MS.gene47716:CDS |
CTAATCACTAAAATGAGTAT+TGG | 0.430164 | 5.3:-73090664 | None:intergenic |
TGTTGAAAAGCCATTATGTT+GGG | 0.431386 | 5.3:-73089485 | MS.gene47716:CDS |
CCAAAATCTACCTTTGACTC+TGG | 0.435822 | 5.3:+73089289 | None:intergenic |
GCATCGACCGGTTCCAGGGC+TGG | 0.439356 | 5.3:-73089383 | MS.gene47716:CDS |
ATCCTTGCCAGCCCTGGAAC+CGG | 0.444779 | 5.3:+73089376 | None:intergenic |
GCTTCCACTATTATTTGTGT+TGG | 0.455348 | 5.3:+73089726 | None:intergenic |
CCTATGTTCTTGCATTGCCT+TGG | 0.455581 | 5.3:+73090591 | None:intergenic |
GACACGAAAGAACATTTCTT+GGG | 0.462909 | 5.3:-73089427 | MS.gene47716:CDS |
ACCACCAATAACACTATTGT+GGG | 0.470153 | 5.3:-73090481 | MS.gene47716:CDS |
TTTCTTGGGACTAATTGATT+GGG | 0.478579 | 5.3:-73089413 | MS.gene47716:CDS |
TCTATTAATTTACAACTGTA+GGG | 0.479476 | 5.3:+73089514 | None:intergenic |
ATGAAGTGCAAGTATTCCTT+AGG | 0.482803 | 5.3:+73089151 | None:intergenic |
GGCTTGGGTTCAGGTGGAGG+AGG | 0.482969 | 5.3:+73089832 | None:intergenic |
ATTGCTCGAGCGGGCTATCT+CGG | 0.484103 | 5.3:+73089972 | None:intergenic |
ATTTCTTTAGACCAATCTCA+TGG | 0.487418 | 5.3:-73089111 | MS.gene47716:CDS |
GTCCTAAAAGGAATGGTGAT+TGG | 0.487820 | 5.3:-73089192 | MS.gene47716:CDS |
AGAAGGTAATCCCATGAGAT+TGG | 0.494084 | 5.3:+73089100 | None:intergenic |
TTCTATTAATTTACAACTGT+AGG | 0.494706 | 5.3:+73089513 | None:intergenic |
GACCGGTTCCAGGGCTGGCA+AGG | 0.497114 | 5.3:-73089378 | MS.gene47716:CDS |
CGGTTGTTGCAAAGTAGCTC+AGG | 0.499190 | 5.3:+73090376 | None:intergenic |
AAACATGTTTCTTGTATCAT+GGG | 0.502267 | 5.3:-73089995 | MS.gene47716:CDS |
TCAGCCGCTTCAACCAATAG+TGG | 0.504854 | 5.3:-73089649 | MS.gene47716:CDS |
AGTACATGCGACTTATTAGC+TGG | 0.506554 | 5.3:+73089788 | None:intergenic |
GGATCTTATCATATTCCTTG+TGG | 0.513474 | 5.3:-73089247 | MS.gene47716:CDS |
GATGGAAGGTGGGTGTCTTG+GGG | 0.526099 | 5.3:+73089897 | None:intergenic |
CTAGCCAACACAAATAATAG+TGG | 0.526578 | 5.3:-73089730 | MS.gene47716:CDS |
CACCACCAATAACACTATTG+TGG | 0.528613 | 5.3:-73090482 | MS.gene47716:CDS |
GTGAAGGATGGATGGAAGGT+GGG | 0.534125 | 5.3:+73089887 | None:intergenic |
GTCATAGAGTGAAGGATGGA+TGG | 0.535942 | 5.3:+73089879 | None:intergenic |
AAGCCAGAGGAAACCATTGA+AGG | 0.538348 | 5.3:-73090295 | MS.gene47716:CDS |
GATTCGGGCTTGGGTTCAGG+TGG | 0.543751 | 5.3:+73089826 | None:intergenic |
GATCTACATGAATCTTCCTA+AGG | 0.548247 | 5.3:-73089167 | MS.gene47716:CDS |
AGAAACAAGAGCCTCAGCTA+AGG | 0.548714 | 5.3:+73090444 | None:intergenic |
TTGTTGAAAAGCCATTATGT+TGG | 0.550086 | 5.3:-73089486 | MS.gene47716:CDS |
GTCGGTCCATCTGCTCCACC+AGG | 0.550954 | 5.3:+73089340 | None:intergenic |
TGGGTGTCTTGGGGTCAAAA+GGG | 0.554761 | 5.3:+73089906 | None:intergenic |
GTATAATTGTGCAGGCAACT+TGG | 0.557460 | 5.3:-73090083 | MS.gene47716:intron |
GGAGGTAGTTGCAGCTACCA+AGG | 0.558424 | 5.3:-73090608 | MS.gene47716:CDS |
AGTGAAGGATGGATGGAAGG+TGG | 0.560310 | 5.3:+73089886 | None:intergenic |
CCAAGGCAATGCAAGAACAT+AGG | 0.562331 | 5.3:-73090591 | MS.gene47716:CDS |
GTGGTGCCAATAGTAATCAT+AGG | 0.562421 | 5.3:+73090499 | None:intergenic |
TGGAGGAGGTAGATCCGAGA+TGG | 0.563260 | 5.3:+73089846 | None:intergenic |
AATATGATAAGATCCAACTA+CGG | 0.564107 | 5.3:+73089255 | None:intergenic |
TAGAGTGAAGGATGGATGGA+AGG | 0.564472 | 5.3:+73089883 | None:intergenic |
CAGGCAACTTGGATGAAATG+TGG | 0.566561 | 5.3:-73090072 | MS.gene47716:CDS |
ATTTCCACTATTGGTTGAAG+CGG | 0.566759 | 5.3:+73089645 | None:intergenic |
CTTGGGACTAATTGATTGGG+TGG | 0.567048 | 5.3:-73089410 | MS.gene47716:CDS |
AGACTTGTTATTGCTCGAGC+GGG | 0.569461 | 5.3:+73089963 | None:intergenic |
ACAAAGATTTCCAGAGTCAA+AGG | 0.570544 | 5.3:-73089299 | MS.gene47716:CDS |
GGAGTTCCTGGTGGAGCAGA+TGG | 0.571944 | 5.3:-73089346 | MS.gene47716:CDS |
TGAAATGGTCACTAACTCCA+TGG | 0.576847 | 5.3:-73090404 | MS.gene47716:CDS |
AGGCAACTTGGATGAAATGT+GGG | 0.579164 | 5.3:-73090071 | MS.gene47716:CDS |
AGCCAGAGGAAACCATTGAA+GGG | 0.581302 | 5.3:-73090294 | MS.gene47716:CDS |
AAAAGGGACCTCTGAAAACA+AGG | 0.581419 | 5.3:+73089922 | None:intergenic |
CCCCACAATAGTGTTATTGG+TGG | 0.583667 | 5.3:+73090480 | None:intergenic |
TCTTATCATATTCCTTGTGG+TGG | 0.583934 | 5.3:-73089244 | MS.gene47716:CDS |
AAGAGCATCGACCGGTTCCA+GGG | 0.585377 | 5.3:-73089387 | MS.gene47716:CDS |
TTTCTTTAGACCAATCTCAT+GGG | 0.587261 | 5.3:-73089110 | MS.gene47716:CDS |
ATGCCTAGTCCTAAAAGGAA+TGG | 0.590231 | 5.3:-73089199 | MS.gene47716:CDS |
ATATGATAAGATCCAACTAC+GGG | 0.599022 | 5.3:+73089256 | None:intergenic |
TGGCATGCAACTTTGACCAT+CGG | 0.600034 | 5.3:-73090038 | MS.gene47716:CDS |
AAGACTTGTTATTGCTCGAG+CGG | 0.603884 | 5.3:+73089962 | None:intergenic |
AAGTAGCTCAGGTTCACCCA+TGG | 0.604674 | 5.3:+73090387 | None:intergenic |
ACTTTGCAACAACCGTGGTG+TGG | 0.609718 | 5.3:-73090368 | MS.gene47716:CDS |
TTGGGTGGAAGAGCATCGAC+CGG | 0.614426 | 5.3:-73089395 | MS.gene47716:CDS |
AGCAGATGGACCGACATTTG+TGG | 0.619293 | 5.3:-73089332 | MS.gene47716:CDS |
AATAGGCGTCCGCTATCCGA+TGG | 0.620621 | 5.3:+73090022 | None:intergenic |
TGACATGTACATCTCCATCT+CGG | 0.620929 | 5.3:-73089860 | MS.gene47716:CDS |
ATGTACATGTCATAGAGTGA+AGG | 0.625954 | 5.3:+73089871 | None:intergenic |
CAGTGTGAATATTACCAAAG+AGG | 0.626621 | 5.3:-73090629 | MS.gene47716:CDS |
CAACTTTGACCATCGGATAG+CGG | 0.635631 | 5.3:-73090031 | MS.gene47716:CDS |
CCAGAAGACACCACAAATGT+CGG | 0.636633 | 5.3:+73089322 | None:intergenic |
CTTGTTCCAAAGAAAACACA+TGG | 0.639769 | 5.3:-73090268 | MS.gene47716:CDS |
ATTTATTGCGGAGTTCCTGG+TGG | 0.643183 | 5.3:-73089355 | MS.gene47716:CDS |
GAACACACCAATACTAACAG+GGG | 0.649933 | 5.3:+73090537 | None:intergenic |
AAAATGGGGATTGTGGTCGA+CGG | 0.658600 | 5.3:-73089613 | MS.gene47716:CDS |
GGAAGAATGAGATTAAGCAA+TGG | 0.658733 | 5.3:-73089592 | MS.gene47716:CDS |
TGTGAATATTACCAAAGAGG+AGG | 0.660805 | 5.3:-73090626 | MS.gene47716:CDS |
GCAACTTGGATGAAATGTGG+GGG | 0.664532 | 5.3:-73090069 | MS.gene47716:CDS |
AGAACACACCAATACTAACA+GGG | 0.664943 | 5.3:+73090536 | None:intergenic |
TCTCAATTTGCATAAGCCAG+AGG | 0.668470 | 5.3:-73090308 | MS.gene47716:CDS |
GGGCTGGCAAGGATTTATTG+CGG | 0.669488 | 5.3:-73089367 | MS.gene47716:CDS |
GAAATGGTCACTAACTCCAT+GGG | 0.670922 | 5.3:-73090403 | MS.gene47716:CDS |
ACATGTCATAGAGTGAAGGA+TGG | 0.670976 | 5.3:+73089875 | None:intergenic |
TAGCCAGCATCACCACCACA+AGG | 0.673907 | 5.3:+73089232 | None:intergenic |
GGCAACTTGGATGAAATGTG+GGG | 0.674719 | 5.3:-73090070 | MS.gene47716:CDS |
GAGATTGGTCTAAAGAAATG+GGG | 0.682938 | 5.3:+73089115 | None:intergenic |
GGAATACTTGCACTTCATGG+AGG | 0.690260 | 5.3:-73089146 | MS.gene47716:CDS |
CCACCAATAACACTATTGTG+GGG | 0.693360 | 5.3:-73090480 | MS.gene47716:CDS |
AACACACCAATACTAACAGG+GGG | 0.696942 | 5.3:+73090538 | None:intergenic |
GAGCTACTTTGCAACAACCG+TGG | 0.705966 | 5.3:-73090373 | MS.gene47716:CDS |
CAACTTGGATGAAATGTGGG+GGG | 0.712514 | 5.3:-73090068 | MS.gene47716:CDS |
CTTCAACAAAATCCACACCA+CGG | 0.748079 | 5.3:+73090356 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGAATTATTATCATTATGC+AGG | - | chr5.3:73089585-73089604 | MS.gene47716:CDS | 20.0% |
!! | TCTATTAATTTACAACTGTA+GGG | + | chr5.3:73090234-73090253 | None:intergenic | 20.0% |
!! | TTCTATTAATTTACAACTGT+AGG | + | chr5.3:73090235-73090254 | None:intergenic | 20.0% |
!!! | GTTTGTTTTAATATCTGATT+CGG | + | chr5.3:73089938-73089957 | None:intergenic | 20.0% |
!!! | TTTGTTTTAATATCTGATTC+GGG | + | chr5.3:73089937-73089956 | None:intergenic | 20.0% |
! | AAACATGTTTCTTGTATCAT+GGG | - | chr5.3:73089750-73089769 | MS.gene47716:CDS | 25.0% |
! | AAGAAACATGTTTGTAGAAT+AGG | + | chr5.3:73089743-73089762 | None:intergenic | 25.0% |
! | AATATGATAAGATCCAACTA+CGG | + | chr5.3:73090493-73090512 | None:intergenic | 25.0% |
! | AATTGTATGTATAATTGTGC+AGG | - | chr5.3:73089654-73089673 | MS.gene47716:CDS | 25.0% |
! | ATGAATCCTATGATTACTAT+TGG | - | chr5.3:73089240-73089259 | MS.gene47716:CDS | 25.0% |
!! | AGTTTATGAGTTCGTATTTT+GGG | - | chr5.3:73090193-73090212 | MS.gene47716:intron | 25.0% |
!!! | ACAAAAACATTTTGATCTCA+AGG | - | chr5.3:73089545-73089564 | MS.gene47716:CDS | 25.0% |
!!! | CAAAAACATTTTGATCTCAA+GGG | - | chr5.3:73089546-73089565 | MS.gene47716:CDS | 25.0% |
ATATGATAAGATCCAACTAC+GGG | + | chr5.3:73090492-73090511 | None:intergenic | 30.0% | |
ATTTCTTGGGACTAATTGAT+TGG | - | chr5.3:73090331-73090350 | MS.gene47716:CDS | 30.0% | |
ATTTCTTTAGACCAATCTCA+TGG | - | chr5.3:73090634-73090653 | MS.gene47716:CDS | 30.0% | |
CAAACATGTTTCTTGTATCA+TGG | - | chr5.3:73089749-73089768 | MS.gene47716:CDS | 30.0% | |
GAAATGTTGTTGCAAAAATG+GGG | - | chr5.3:73090118-73090137 | MS.gene47716:intron | 30.0% | |
GGAAATGTTGTTGCAAAAAT+GGG | - | chr5.3:73090117-73090136 | MS.gene47716:intron | 30.0% | |
TGGAAATGTTGTTGCAAAAA+TGG | - | chr5.3:73090116-73090135 | MS.gene47716:intron | 30.0% | |
TGTTGAAAAGCCATTATGTT+GGG | - | chr5.3:73090260-73090279 | MS.gene47716:CDS | 30.0% | |
TTGTTGAAAAGCCATTATGT+TGG | - | chr5.3:73090259-73090278 | MS.gene47716:CDS | 30.0% | |
TTTCTTGGGACTAATTGATT+GGG | - | chr5.3:73090332-73090351 | MS.gene47716:CDS | 30.0% | |
TTTCTTTAGACCAATCTCAT+GGG | - | chr5.3:73090635-73090654 | MS.gene47716:CDS | 30.0% | |
! | AATCATTTTCTGCTTTCTTG+TGG | - | chr5.3:73090061-73090080 | MS.gene47716:CDS | 30.0% |
! | GAGTTTATGAGTTCGTATTT+TGG | - | chr5.3:73090192-73090211 | MS.gene47716:intron | 30.0% |
!! | ATGAGATTGGTCTAAAGAAA+TGG | + | chr5.3:73090635-73090654 | None:intergenic | 30.0% |
!! | TGAGATTGGTCTAAAGAAAT+GGG | + | chr5.3:73090634-73090653 | None:intergenic | 30.0% |
AAGAACACACCAATACTAAC+AGG | + | chr5.3:73089213-73089232 | None:intergenic | 35.0% | |
ACAAAGATTTCCAGAGTCAA+AGG | - | chr5.3:73090446-73090465 | MS.gene47716:CDS | 35.0% | |
ACCACCAATAACACTATTGT+GGG | - | chr5.3:73089264-73089283 | MS.gene47716:CDS | 35.0% | |
AGAACACACCAATACTAACA+GGG | + | chr5.3:73089212-73089231 | None:intergenic | 35.0% | |
ATGAAGTGCAAGTATTCCTT+AGG | + | chr5.3:73090597-73090616 | None:intergenic | 35.0% | |
ATGTACATGTCATAGAGTGA+AGG | + | chr5.3:73089877-73089896 | None:intergenic | 35.0% | |
CAGTGTGAATATTACCAAAG+AGG | - | chr5.3:73089116-73089135 | MS.gene47716:CDS | 35.0% | |
CTAGCCAACACAAATAATAG+TGG | - | chr5.3:73090015-73090034 | MS.gene47716:CDS | 35.0% | |
CTTGTTCCAAAGAAAACACA+TGG | - | chr5.3:73089477-73089496 | MS.gene47716:CDS | 35.0% | |
GACACGAAAGAACATTTCTT+GGG | - | chr5.3:73090318-73090337 | MS.gene47716:CDS | 35.0% | |
GATCTACATGAATCTTCCTA+AGG | - | chr5.3:73090578-73090597 | MS.gene47716:CDS | 35.0% | |
GCTTCCACTATTATTTGTGT+TGG | + | chr5.3:73090022-73090041 | None:intergenic | 35.0% | |
GGAAGAATGAGATTAAGCAA+TGG | - | chr5.3:73090153-73090172 | MS.gene47716:intron | 35.0% | |
GGATCTTATCATATTCCTTG+TGG | - | chr5.3:73090498-73090517 | MS.gene47716:CDS | 35.0% | |
GTTTCTTATTACGTCTTTGC+TGG | - | chr5.3:73089318-73089337 | MS.gene47716:CDS | 35.0% | |
TAAGGAATACTTGCACTTCA+TGG | - | chr5.3:73090596-73090615 | MS.gene47716:CDS | 35.0% | |
TCTTATCATATTCCTTGTGG+TGG | - | chr5.3:73090501-73090520 | MS.gene47716:CDS | 35.0% | |
TGCAACAACATTTCCACTAT+TGG | + | chr5.3:73090112-73090131 | None:intergenic | 35.0% | |
TGTGAATATTACCAAAGAGG+AGG | - | chr5.3:73089119-73089138 | MS.gene47716:CDS | 35.0% | |
TTTGAAAAACTCCTTAGCTG+AGG | - | chr5.3:73089290-73089309 | MS.gene47716:CDS | 35.0% | |
! | AACCAATCACCATTCCTTTT+AGG | + | chr5.3:73090558-73090577 | None:intergenic | 35.0% |
! | AGTCAAAGGTAGATTTTGGA+TGG | - | chr5.3:73090460-73090479 | MS.gene47716:CDS | 35.0% |
! | ATTTCCACTATTGGTTGAAG+CGG | + | chr5.3:73090103-73090122 | None:intergenic | 35.0% |
! | GTCAAAGGTAGATTTTGGAT+GGG | - | chr5.3:73090461-73090480 | MS.gene47716:CDS | 35.0% |
! | TCAAAGGTAGATTTTGGATG+GGG | - | chr5.3:73090462-73090481 | MS.gene47716:CDS | 35.0% |
!! | GAGATTGGTCTAAAGAAATG+GGG | + | chr5.3:73090633-73090652 | None:intergenic | 35.0% |
!! | TTAATATCTGATTCGGGCTT+GGG | + | chr5.3:73089931-73089950 | None:intergenic | 35.0% |
!! | TTTAATATCTGATTCGGGCT+TGG | + | chr5.3:73089932-73089951 | None:intergenic | 35.0% |
!!! | AGAGCGAGTTCATGATTTTT+TGG | - | chr5.3:73090287-73090306 | MS.gene47716:CDS | 35.0% |
AACACACCAATACTAACAGG+GGG | + | chr5.3:73089210-73089229 | None:intergenic | 40.0% | |
ACACCCCACAATAGTGTTAT+TGG | + | chr5.3:73089271-73089290 | None:intergenic | 40.0% | |
ACATGTCATAGAGTGAAGGA+TGG | + | chr5.3:73089873-73089892 | None:intergenic | 40.0% | |
AGAAGGTAATCCCATGAGAT+TGG | + | chr5.3:73090648-73090667 | None:intergenic | 40.0% | |
AGGCAACTTGGATGAAATGT+GGG | - | chr5.3:73089674-73089693 | MS.gene47716:CDS | 40.0% | |
AGTACATGCGACTTATTAGC+TGG | + | chr5.3:73089960-73089979 | None:intergenic | 40.0% | |
ATGCCTAGTCCTAAAAGGAA+TGG | - | chr5.3:73090546-73090565 | MS.gene47716:CDS | 40.0% | |
CACCACCAATAACACTATTG+TGG | - | chr5.3:73089263-73089282 | MS.gene47716:CDS | 40.0% | |
CCAAAATCTACCTTTGACTC+TGG | + | chr5.3:73090459-73090478 | None:intergenic | 40.0% | |
CCACCAATAACACTATTGTG+GGG | - | chr5.3:73089265-73089284 | MS.gene47716:CDS | 40.0% | |
CTTCAACAAAATCCACACCA+CGG | + | chr5.3:73089392-73089411 | None:intergenic | 40.0% | |
GAAATGGTCACTAACTCCAT+GGG | - | chr5.3:73089342-73089361 | MS.gene47716:CDS | 40.0% | |
GAACACACCAATACTAACAG+GGG | + | chr5.3:73089211-73089230 | None:intergenic | 40.0% | |
GGACACGAAAGAACATTTCT+TGG | - | chr5.3:73090317-73090336 | MS.gene47716:CDS | 40.0% | |
GTATAATTGTGCAGGCAACT+TGG | - | chr5.3:73089662-73089681 | MS.gene47716:CDS | 40.0% | |
GTCCTAAAAGGAATGGTGAT+TGG | - | chr5.3:73090553-73090572 | MS.gene47716:CDS | 40.0% | |
TCTCAATTTGCATAAGCCAG+AGG | - | chr5.3:73089437-73089456 | MS.gene47716:CDS | 40.0% | |
TGAAATGGTCACTAACTCCA+TGG | - | chr5.3:73089341-73089360 | MS.gene47716:CDS | 40.0% | |
TGACATGTACATCTCCATCT+CGG | - | chr5.3:73089885-73089904 | MS.gene47716:CDS | 40.0% | |
TGTTGCAAAAATGGGGATTG+TGG | - | chr5.3:73090125-73090144 | MS.gene47716:intron | 40.0% | |
TTACGTCTTTGCTGGTGAAA+TGG | - | chr5.3:73089326-73089345 | MS.gene47716:CDS | 40.0% | |
TTCTGCTTTCTTGTGGAAGA+TGG | - | chr5.3:73090068-73090087 | MS.gene47716:CDS | 40.0% | |
! | AAAAGGGACCTCTGAAAACA+AGG | + | chr5.3:73089826-73089845 | None:intergenic | 40.0% |
! | AGCACACCATGTGTTTTCTT+TGG | + | chr5.3:73089486-73089505 | None:intergenic | 40.0% |
! | CAAAGGTAGATTTTGGATGG+GGG | - | chr5.3:73090463-73090482 | MS.gene47716:CDS | 40.0% |
! | CCAGAGTCAAAGGTAGATTT+TGG | - | chr5.3:73090456-73090475 | MS.gene47716:CDS | 40.0% |
! | GTGGTGCCAATAGTAATCAT+AGG | + | chr5.3:73089249-73089268 | None:intergenic | 40.0% |
!! | AAGACTTGTTATTGCTCGAG+CGG | + | chr5.3:73089786-73089805 | None:intergenic | 40.0% |
!!! | CAACACAACCTTGTTTTCAG+AGG | - | chr5.3:73089815-73089834 | MS.gene47716:CDS | 40.0% |
!!! | GCGAGTTCATGATTTTTTGG+AGG | - | chr5.3:73090290-73090309 | MS.gene47716:CDS | 40.0% |
!!! | TCACCATTCCTTTTAGGACT+AGG | + | chr5.3:73090552-73090571 | None:intergenic | 40.0% |
!!! | TCATGATTTTTTGGAGGCTG+CGG | - | chr5.3:73090296-73090315 | MS.gene47716:CDS | 40.0% |
!!! | TTCCTTTTAGGACTAGGCAT+TGG | + | chr5.3:73090546-73090565 | None:intergenic | 40.0% |
AAAATGGGGATTGTGGTCGA+CGG | - | chr5.3:73090132-73090151 | MS.gene47716:intron | 45.0% | |
AAGCCAGAGGAAACCATTGA+AGG | - | chr5.3:73089450-73089469 | MS.gene47716:CDS | 45.0% | |
AGAAACAAGAGCCTCAGCTA+AGG | + | chr5.3:73089304-73089323 | None:intergenic | 45.0% | |
AGCCAGAGGAAACCATTGAA+GGG | - | chr5.3:73089451-73089470 | MS.gene47716:CDS | 45.0% | |
AGGATTTATTGCGGAGTTCC+TGG | - | chr5.3:73090387-73090406 | MS.gene47716:CDS | 45.0% | |
ATTTATTGCGGAGTTCCTGG+TGG | - | chr5.3:73090390-73090409 | MS.gene47716:CDS | 45.0% | |
CAACTTGGATGAAATGTGGG+GGG | - | chr5.3:73089677-73089696 | MS.gene47716:CDS | 45.0% | |
CAACTTTGACCATCGGATAG+CGG | - | chr5.3:73089714-73089733 | MS.gene47716:CDS | 45.0% | |
CAGGCAACTTGGATGAAATG+TGG | - | chr5.3:73089673-73089692 | MS.gene47716:CDS | 45.0% | |
CCAAGGCAATGCAAGAACAT+AGG | - | chr5.3:73089154-73089173 | MS.gene47716:CDS | 45.0% | |
CCAGAAGACACCACAAATGT+CGG | + | chr5.3:73090426-73090445 | None:intergenic | 45.0% | |
CCTATGTTCTTGCATTGCCT+TGG | + | chr5.3:73089157-73089176 | None:intergenic | 45.0% | |
CGCTCTGTAACCCAACATAA+TGG | + | chr5.3:73090273-73090292 | None:intergenic | 45.0% | |
CTACTTCCCCCTGTTAGTAT+TGG | - | chr5.3:73089201-73089220 | MS.gene47716:CDS | 45.0% | |
CTTGGGACTAATTGATTGGG+TGG | - | chr5.3:73090335-73090354 | MS.gene47716:CDS | 45.0% | |
GCAACTTGGATGAAATGTGG+GGG | - | chr5.3:73089676-73089695 | MS.gene47716:CDS | 45.0% | |
GGAATACTTGCACTTCATGG+AGG | - | chr5.3:73090599-73090618 | MS.gene47716:CDS | 45.0% | |
GGCAACTTGGATGAAATGTG+GGG | - | chr5.3:73089675-73089694 | MS.gene47716:CDS | 45.0% | |
GTCATAGAGTGAAGGATGGA+TGG | + | chr5.3:73089869-73089888 | None:intergenic | 45.0% | |
TAGAGTGAAGGATGGATGGA+AGG | + | chr5.3:73089865-73089884 | None:intergenic | 45.0% | |
TGCCAATGCCTAGTCCTAAA+AGG | - | chr5.3:73090541-73090560 | MS.gene47716:CDS | 45.0% | |
TGGAACAAGCTTCCCTTCAA+TGG | + | chr5.3:73089466-73089485 | None:intergenic | 45.0% | |
TGGCATGCAACTTTGACCAT+CGG | - | chr5.3:73089707-73089726 | MS.gene47716:CDS | 45.0% | |
TTCCCTTCAATGGTTTCCTC+TGG | + | chr5.3:73089456-73089475 | None:intergenic | 45.0% | |
! | CCCCACAATAGTGTTATTGG+TGG | + | chr5.3:73089268-73089287 | None:intergenic | 45.0% |
!! | AGACTTGTTATTGCTCGAGC+GGG | + | chr5.3:73089785-73089804 | None:intergenic | 45.0% |
AAGTAGCTCAGGTTCACCCA+TGG | + | chr5.3:73089361-73089380 | None:intergenic | 50.0% | |
ACTTTGCAACAACCGTGGTG+TGG | - | chr5.3:73089377-73089396 | MS.gene47716:CDS | 50.0% | |
AGCAGATGGACCGACATTTG+TGG | - | chr5.3:73090413-73090432 | MS.gene47716:CDS | 50.0% | |
AGCTGCAACTACCTCCTCTT+TGG | + | chr5.3:73089133-73089152 | None:intergenic | 50.0% | |
AGTGAAGGATGGATGGAAGG+TGG | + | chr5.3:73089862-73089881 | None:intergenic | 50.0% | |
CAATAAATCCTTGCCAGCCC+TGG | + | chr5.3:73090378-73090397 | None:intergenic | 50.0% | |
CCGACATTTGTGGTGTCTTC+TGG | - | chr5.3:73090423-73090442 | MS.gene47716:CDS | 50.0% | |
CGGTTGTTGCAAAGTAGCTC+AGG | + | chr5.3:73089372-73089391 | None:intergenic | 50.0% | |
GTGAAGGATGGATGGAAGGT+GGG | + | chr5.3:73089861-73089880 | None:intergenic | 50.0% | |
TCAGCCGCTTCAACCAATAG+TGG | - | chr5.3:73090096-73090115 | MS.gene47716:intron | 50.0% | |
TGGGTGTCTTGGGGTCAAAA+GGG | + | chr5.3:73089842-73089861 | None:intergenic | 50.0% | |
! | ATTCCTTGTGGTGGTGATGC+TGG | - | chr5.3:73090510-73090529 | MS.gene47716:CDS | 50.0% |
! | GAAATGTGGGGGGTTAGTAG+TGG | - | chr5.3:73089687-73089706 | MS.gene47716:CDS | 50.0% |
! | GAGCTACTTTGCAACAACCG+TGG | - | chr5.3:73089372-73089391 | MS.gene47716:CDS | 50.0% |
! | GGGCTGGCAAGGATTTATTG+CGG | - | chr5.3:73090378-73090397 | MS.gene47716:CDS | 50.0% |
!! | ACATGGTGTGCTTGCTGTTC+AGG | - | chr5.3:73089494-73089513 | MS.gene47716:CDS | 50.0% |
AATAGGCGTCCGCTATCCGA+TGG | + | chr5.3:73089726-73089745 | None:intergenic | 55.0% | |
GATGGAAGGTGGGTGTCTTG+GGG | + | chr5.3:73089851-73089870 | None:intergenic | 55.0% | |
GGAGGTAGTTGCAGCTACCA+AGG | - | chr5.3:73089137-73089156 | MS.gene47716:CDS | 55.0% | |
GGATGGAAGGTGGGTGTCTT+GGG | + | chr5.3:73089852-73089871 | None:intergenic | 55.0% | |
GTGGGTGTCTTGGGGTCAAA+AGG | + | chr5.3:73089843-73089862 | None:intergenic | 55.0% | |
TAGCCAGCATCACCACCACA+AGG | + | chr5.3:73090516-73090535 | None:intergenic | 55.0% | |
TGGAGGAGGTAGATCCGAGA+TGG | + | chr5.3:73089902-73089921 | None:intergenic | 55.0% | |
TGGATGGAAGGTGGGTGTCT+TGG | + | chr5.3:73089853-73089872 | None:intergenic | 55.0% | |
!! | AAGAGCATCGACCGGTTCCA+GGG | - | chr5.3:73090358-73090377 | MS.gene47716:CDS | 55.0% |
!! | ATTGCTCGAGCGGGCTATCT+CGG | + | chr5.3:73089776-73089795 | None:intergenic | 55.0% |
!! | TCTGATTCGGGCTTGGGTTC+AGG | + | chr5.3:73089925-73089944 | None:intergenic | 55.0% |
!! | TTGGGTGGAAGAGCATCGAC+CGG | - | chr5.3:73090350-73090369 | MS.gene47716:CDS | 55.0% |
ATCCTTGCCAGCCCTGGAAC+CGG | + | chr5.3:73090372-73090391 | None:intergenic | 60.0% | |
GATTCGGGCTTGGGTTCAGG+TGG | + | chr5.3:73089922-73089941 | None:intergenic | 60.0% | |
GGAGTTCCTGGTGGAGCAGA+TGG | - | chr5.3:73090399-73090418 | MS.gene47716:CDS | 60.0% | |
GGATGGGGGAAACCCGTAGT+TGG | - | chr5.3:73090477-73090496 | MS.gene47716:CDS | 60.0% | |
!! | GAAGAGCATCGACCGGTTCC+AGG | - | chr5.3:73090357-73090376 | MS.gene47716:CDS | 60.0% |
GGCTTGGGTTCAGGTGGAGG+AGG | + | chr5.3:73089916-73089935 | None:intergenic | 65.0% | |
GTCGGTCCATCTGCTCCACC+AGG | + | chr5.3:73090408-73090427 | None:intergenic | 65.0% | |
TCGGGCTTGGGTTCAGGTGG+AGG | + | chr5.3:73089919-73089938 | None:intergenic | 65.0% | |
! | GACCGGTTCCAGGGCTGGCA+AGG | - | chr5.3:73090367-73090386 | MS.gene47716:CDS | 70.0% |
! | GCATCGACCGGTTCCAGGGC+TGG | - | chr5.3:73090362-73090381 | MS.gene47716:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 73089093 | 73090674 | 73089093 | ID=MS.gene47716 |
chr5.3 | mRNA | 73089093 | 73090674 | 73089093 | ID=MS.gene47716.t1;Parent=MS.gene47716 |
chr5.3 | exon | 73090252 | 73090674 | 73090252 | ID=MS.gene47716.t1.exon1;Parent=MS.gene47716.t1 |
chr5.3 | CDS | 73090252 | 73090674 | 73090252 | ID=cds.MS.gene47716.t1;Parent=MS.gene47716.t1 |
chr5.3 | exon | 73089093 | 73090091 | 73089093 | ID=MS.gene47716.t1.exon2;Parent=MS.gene47716.t1 |
chr5.3 | CDS | 73089093 | 73090091 | 73089093 | ID=cds.MS.gene47716.t1;Parent=MS.gene47716.t1 |
Gene Sequence |
Protein sequence |