Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84426.t1 | XP_013448547.1 | 76.5 | 429 | 18 | 1 | 1 | 346 | 1 | 429 | 2.10E-150 | 542 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84426.t1 | G7L045 | 76.5 | 429 | 18 | 1 | 1 | 346 | 1 | 429 | 1.5e-150 | 542.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene84426 | 0.831707 | 1.43E-55 | -1.69E-46 |
| MS.gene049159 | MS.gene84426 | 0.811123 | 8.20E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene84426 | 0.802344 | 5.87E-49 | -1.69E-46 |
| MS.gene049271 | MS.gene84426 | 0.806494 | 8.00E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene84426 | 0.84266 | 2.26E-58 | -1.69E-46 |
| MS.gene049404 | MS.gene84426 | 0.809124 | 2.21E-50 | -1.69E-46 |
| MS.gene049672 | MS.gene84426 | 0.813904 | 2.02E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene84426 | 0.857169 | 1.96E-62 | -1.69E-46 |
| MS.gene049770 | MS.gene84426 | 0.820577 | 6.37E-53 | -1.69E-46 |
| MS.gene049807 | MS.gene84426 | 0.809517 | 1.82E-50 | -1.69E-46 |
| MS.gene049821 | MS.gene84426 | 0.845379 | 4.21E-59 | -1.69E-46 |
| MS.gene049824 | MS.gene84426 | 0.814919 | 1.21E-51 | -1.69E-46 |
| MS.gene049825 | MS.gene84426 | 0.810363 | 1.20E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene84426 | 0.870236 | 1.70E-66 | -1.69E-46 |
| MS.gene049873 | MS.gene84426 | 0.809573 | 1.77E-50 | -1.69E-46 |
| MS.gene050020 | MS.gene84426 | 0.839351 | 1.67E-57 | -1.69E-46 |
| MS.gene050214 | MS.gene84426 | 0.813233 | 2.84E-51 | -1.69E-46 |
| MS.gene050251 | MS.gene84426 | 0.801894 | 7.26E-49 | -1.69E-46 |
| MS.gene050253 | MS.gene84426 | 0.808542 | 2.94E-50 | -1.69E-46 |
| MS.gene050273 | MS.gene84426 | 0.817324 | 3.50E-52 | -1.69E-46 |
| MS.gene05045 | MS.gene84426 | 0.82182 | 3.29E-53 | -1.69E-46 |
| MS.gene050807 | MS.gene84426 | 0.854287 | 1.36E-61 | -1.69E-46 |
| MS.gene050808 | MS.gene84426 | 0.825851 | 3.74E-54 | -1.69E-46 |
| MS.gene050901 | MS.gene84426 | 0.85037 | 1.77E-60 | -1.69E-46 |
| MS.gene051018 | MS.gene84426 | 0.837399 | 5.32E-57 | -1.69E-46 |
| MS.gene051021 | MS.gene84426 | 0.819195 | 1.32E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene84426 | 0.800014 | 1.76E-48 | -1.69E-46 |
| MS.gene051199 | MS.gene84426 | 0.824115 | 9.61E-54 | -1.69E-46 |
| MS.gene051247 | MS.gene84426 | 0.847312 | 1.25E-59 | -1.69E-46 |
| MS.gene051279 | MS.gene84426 | 0.841485 | 4.62E-58 | -1.69E-46 |
| MS.gene051328 | MS.gene84426 | 0.80445 | 2.15E-49 | -1.69E-46 |
| MS.gene051388 | MS.gene84426 | 0.81629 | 5.97E-52 | -1.69E-46 |
| MS.gene05157 | MS.gene84426 | 0.839232 | 1.79E-57 | -1.69E-46 |
| MS.gene051664 | MS.gene84426 | 0.844756 | 6.21E-59 | -1.69E-46 |
| MS.gene051700 | MS.gene84426 | 0.838068 | 3.58E-57 | -1.69E-46 |
| MS.gene051719 | MS.gene84426 | 0.941871 | 1.95E-101 | -1.69E-46 |
| MS.gene051720 | MS.gene84426 | 0.993219 | 3.06E-198 | -1.69E-46 |
| MS.gene051744 | MS.gene84426 | 0.824222 | 9.07E-54 | -1.69E-46 |
| MS.gene051957 | MS.gene84426 | 0.80228 | 6.05E-49 | -1.69E-46 |
| MS.gene052000 | MS.gene84426 | 0.815392 | 9.46E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene84426 | 0.815077 | 1.11E-51 | -1.69E-46 |
| MS.gene052133 | MS.gene84426 | 0.846529 | 2.05E-59 | -1.69E-46 |
| MS.gene052463 | MS.gene84426 | 0.824163 | 9.37E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene84426 | 0.844226 | 8.62E-59 | -1.69E-46 |
| MS.gene052519 | MS.gene84426 | 0.82326 | 1.52E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene84426 | 0.803834 | 2.88E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene84426 | 0.816266 | 6.04E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene84426 | 0.81348 | 2.51E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene84426 | 0.840286 | 9.53E-58 | -1.69E-46 |
| MS.gene052732 | MS.gene84426 | 0.834 | 3.86E-56 | -1.69E-46 |
| MS.gene052773 | MS.gene84426 | 0.824648 | 7.20E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene84426 | 0.813568 | 2.40E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene84426 | 0.810328 | 1.22E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene84426 | 0.806248 | 9.02E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene84426 | 0.826841 | 2.17E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene84426 | 0.886861 | 2.36E-72 | -1.69E-46 |
| MS.gene053164 | MS.gene84426 | 0.807584 | 4.71E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene84426 | 0.820422 | 6.92E-53 | -1.69E-46 |
| MS.gene053174 | MS.gene84426 | 0.812375 | 4.38E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene84426 | 0.810484 | 1.13E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene84426 | 0.861403 | 1.05E-63 | -1.69E-46 |
| MS.gene053536 | MS.gene84426 | 0.8207 | 5.97E-53 | -1.69E-46 |
| MS.gene053538 | MS.gene84426 | 0.820092 | 8.23E-53 | -1.69E-46 |
| MS.gene053581 | MS.gene84426 | 0.863929 | 1.75E-64 | -1.69E-46 |
| MS.gene053597 | MS.gene84426 | 0.806018 | 1.01E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene84426 | 0.84516 | 4.83E-59 | -1.69E-46 |
| MS.gene05364 | MS.gene84426 | 0.825239 | 5.22E-54 | -1.69E-46 |
| MS.gene053678 | MS.gene84426 | 0.800652 | 1.30E-48 | -1.69E-46 |
| MS.gene05423 | MS.gene84426 | 0.822209 | 2.68E-53 | -1.69E-46 |
| MS.gene054550 | MS.gene84426 | 0.819696 | 1.01E-52 | -1.69E-46 |
| MS.gene054584 | MS.gene84426 | 0.883484 | 4.31E-71 | -1.69E-46 |
| MS.gene05458 | MS.gene84426 | 0.838177 | 3.36E-57 | -1.69E-46 |
| MS.gene054651 | MS.gene84426 | 0.83037 | 3.05E-55 | -1.69E-46 |
| MS.gene054775 | MS.gene84426 | 0.842281 | 2.85E-58 | -1.69E-46 |
| MS.gene054791 | MS.gene84426 | 0.808835 | 2.55E-50 | -1.69E-46 |
| MS.gene054801 | MS.gene84426 | 0.805292 | 1.43E-49 | -1.69E-46 |
| MS.gene054991 | MS.gene84426 | 0.8017 | 7.96E-49 | -1.69E-46 |
| MS.gene055144 | MS.gene84426 | 0.861929 | 7.26E-64 | -1.69E-46 |
| MS.gene055465 | MS.gene84426 | 0.895764 | 7.03E-76 | -1.69E-46 |
| MS.gene055466 | MS.gene84426 | 0.887953 | 9.07E-73 | -1.69E-46 |
| MS.gene055468 | MS.gene84426 | 0.874134 | 8.56E-68 | -1.69E-46 |
| MS.gene055469 | MS.gene84426 | 0.833094 | 6.50E-56 | -1.69E-46 |
| MS.gene055512 | MS.gene84426 | 0.820178 | 7.87E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene84426 | 0.807184 | 5.72E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene84426 | 0.88843 | 5.94E-73 | -1.69E-46 |
| MS.gene055580 | MS.gene84426 | -0.869036 | 4.18E-66 | -1.69E-46 |
| MS.gene055778 | MS.gene84426 | 0.806239 | 9.06E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene84426 | 0.804623 | 1.98E-49 | -1.69E-46 |
| MS.gene055890 | MS.gene84426 | 0.832296 | 1.02E-55 | -1.69E-46 |
| MS.gene055891 | MS.gene84426 | 0.834755 | 2.49E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene84426 | 0.801144 | 1.03E-48 | -1.69E-46 |
| MS.gene056005 | MS.gene84426 | 0.844287 | 8.30E-59 | -1.69E-46 |
| MS.gene056043 | MS.gene84426 | -0.845711 | 3.43E-59 | -1.69E-46 |
| MS.gene05604 | MS.gene84426 | 0.805427 | 1.34E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene84426 | 0.819328 | 1.23E-52 | -1.69E-46 |
| MS.gene056215 | MS.gene84426 | 0.829358 | 5.38E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene84426 | 0.85476 | 9.93E-62 | -1.69E-46 |
| MS.gene056366 | MS.gene84426 | 0.819927 | 8.98E-53 | -1.69E-46 |
| MS.gene056507 | MS.gene84426 | 0.808565 | 2.91E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene84426 | 0.805178 | 1.51E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene84426 | 0.820053 | 8.41E-53 | -1.69E-46 |
| MS.gene056859 | MS.gene84426 | 0.827188 | 1.80E-54 | -1.69E-46 |
| MS.gene057060 | MS.gene84426 | 0.806699 | 7.25E-50 | -1.69E-46 |
| MS.gene057132 | MS.gene84426 | 0.801144 | 1.03E-48 | -1.69E-46 |
| MS.gene057294 | MS.gene84426 | 0.804409 | 2.19E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene84426 | 0.83496 | 2.22E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene84426 | 0.830146 | 3.46E-55 | -1.69E-46 |
| MS.gene058087 | MS.gene84426 | 0.852252 | 5.21E-61 | -1.69E-46 |
| MS.gene058339 | MS.gene84426 | 0.846985 | 1.54E-59 | -1.69E-46 |
| MS.gene05847 | MS.gene84426 | 0.813953 | 1.97E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene84426 | 0.853119 | 2.95E-61 | -1.69E-46 |
| MS.gene058668 | MS.gene84426 | 0.804431 | 2.17E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene84426 | 0.824481 | 7.88E-54 | -1.69E-46 |
| MS.gene058945 | MS.gene84426 | 0.807871 | 4.09E-50 | -1.69E-46 |
| MS.gene05894 | MS.gene84426 | 0.844715 | 6.37E-59 | -1.69E-46 |
| MS.gene059015 | MS.gene84426 | 0.828058 | 1.11E-54 | -1.69E-46 |
| MS.gene059084 | MS.gene84426 | 0.812119 | 4.98E-51 | -1.69E-46 |
| MS.gene059424 | MS.gene84426 | 0.812108 | 5.00E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene84426 | 0.800108 | 1.68E-48 | -1.69E-46 |
| MS.gene059625 | MS.gene84426 | 0.843265 | 1.56E-58 | -1.69E-46 |
| MS.gene059842 | MS.gene84426 | 0.801734 | 7.83E-49 | -1.69E-46 |
| MS.gene059937 | MS.gene84426 | 0.807964 | 3.91E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene84426 | 0.818684 | 1.72E-52 | -1.69E-46 |
| MS.gene060519 | MS.gene84426 | 0.892467 | 1.55E-74 | -1.69E-46 |
| MS.gene060587 | MS.gene84426 | 0.863371 | 2.61E-64 | -1.69E-46 |
| MS.gene060603 | MS.gene84426 | 0.833105 | 6.46E-56 | -1.69E-46 |
| MS.gene060701 | MS.gene84426 | 0.811458 | 6.93E-51 | -1.69E-46 |
| MS.gene060884 | MS.gene84426 | 0.821072 | 4.90E-53 | -1.69E-46 |
| MS.gene060886 | MS.gene84426 | 0.808495 | 3.01E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene84426 | 0.804554 | 2.04E-49 | -1.69E-46 |
| MS.gene061176 | MS.gene84426 | 0.842416 | 2.62E-58 | -1.69E-46 |
| MS.gene061177 | MS.gene84426 | 0.841934 | 3.51E-58 | -1.69E-46 |
| MS.gene061178 | MS.gene84426 | 0.842021 | 3.33E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84426.t1 | MTR_7g055747 | 95.938 | 320 | 13 | 0 | 27 | 346 | 110 | 429 | 0.0 | 540 |
| MS.gene84426.t1 | MTR_7g055560 | 95.938 | 320 | 13 | 0 | 27 | 346 | 110 | 429 | 0.0 | 540 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84426.t1 | AT3G25130 | 45.902 | 183 | 73 | 5 | 182 | 343 | 228 | 405 | 3.37e-35 | 132 |
Find 56 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATATCTTCAATTGATTT+TGG | 0.170861 | 7.4:-49048678 | None:intergenic |
| CAAAGACTAAATGAAGATTT+TGG | 0.193613 | 7.4:+49049062 | MS.gene84426:CDS |
| AAATGAGTTGGAAGCATATT+TGG | 0.211168 | 7.4:+49048620 | MS.gene84426:CDS |
| TCAACAGGGAAGATGAATTT+AGG | 0.246896 | 7.4:+49049416 | MS.gene84426:CDS |
| TGTTCTAATCTTGGAAGTTT+TGG | 0.255756 | 7.4:+49049143 | MS.gene84426:CDS |
| ACACTATGGTCCATTGAAAA+TGG | 0.271896 | 7.4:+49048984 | MS.gene84426:CDS |
| GTTTAGTGAGGATGAGTTAG+AGG | 0.283368 | 7.4:+49049346 | MS.gene84426:CDS |
| GATGATAAAGATGAGGAAAT+TGG | 0.284728 | 7.4:+49048591 | MS.gene84426:CDS |
| TCCAATACCTTTCAAAGCTT+TGG | 0.297202 | 7.4:-49049468 | None:intergenic |
| TCCAAAGCTTTGAAAGGTAT+TGG | 0.299212 | 7.4:+49049467 | MS.gene84426:CDS |
| GAAGAAGTTTGTTCTAATCT+TGG | 0.301550 | 7.4:+49049134 | MS.gene84426:CDS |
| AAAATATGGAGAAACATAAA+TGG | 0.320936 | 7.4:-49048320 | None:intergenic |
| AGAAGTAGTCAAGCCTATAT+TGG | 0.332436 | 7.4:+49048926 | MS.gene84426:CDS |
| TGAGGATGAGTTAGAGGAAG+AGG | 0.350921 | 7.4:+49049352 | MS.gene84426:CDS |
| TTGAATTTAGTATCCAATAT+AGG | 0.358936 | 7.4:-49048939 | None:intergenic |
| CAAGCTTTGAAATTCTCAAC+AGG | 0.378595 | 7.4:+49049401 | MS.gene84426:CDS |
| GTGAAGGAATGGATATGCTT+TGG | 0.388433 | 7.4:+49049246 | MS.gene84426:CDS |
| AGAGAACTCATTGTTCTTGT+TGG | 0.389427 | 7.4:-49048274 | None:intergenic |
| GGACGTAGTTGAATCCATTA+AGG | 0.402615 | 7.4:+49048815 | MS.gene84426:CDS |
| GAGTATGGTGGAAAAGGTAT+AGG | 0.411829 | 7.4:+49049104 | MS.gene84426:CDS |
| AAAAGAGGTTTATTGTCAAA+TGG | 0.412280 | 7.4:+49048743 | MS.gene84426:CDS |
| AGTATGGTGGAAAAGGTATA+GGG | 0.423952 | 7.4:+49049105 | MS.gene84426:CDS |
| TTGGAGAATTTGACAAGGTT+AGG | 0.431973 | 7.4:-49049449 | None:intergenic |
| TGAAGGAATGGATATGCTTT+GGG | 0.440242 | 7.4:+49049247 | MS.gene84426:CDS |
| AAGAAAAGTAACACAAAGAA+AGG | 0.440269 | 7.4:+49049302 | MS.gene84426:CDS |
| AATTGGTTTGCTAAATGAGT+TGG | 0.447975 | 7.4:+49048608 | MS.gene84426:CDS |
| AGAAAATGTGTCTTGTGAAA+AGG | 0.452614 | 7.4:+49048896 | MS.gene84426:CDS |
| GTCTCTATTACCCTTCACTT+TGG | 0.467195 | 7.4:-49049009 | None:intergenic |
| GAGTTAGAGGAAGAGGAGGT+AGG | 0.471390 | 7.4:+49049359 | MS.gene84426:CDS |
| TTGCATCATGTAGGCAAGAA+TGG | 0.480234 | 7.4:+49049494 | MS.gene84426:CDS |
| AATTGGGAGTATGGTGGAAA+AGG | 0.481166 | 7.4:+49049098 | MS.gene84426:CDS |
| GAGAGACATAATAATAGTGA+TGG | 0.502040 | 7.4:+49049221 | MS.gene84426:CDS |
| AGAAAACAAAGTTGAGAAAG+TGG | 0.508967 | 7.4:+49048794 | MS.gene84426:CDS |
| GGATACTAAATTCAATAAAG+TGG | 0.514253 | 7.4:+49048947 | MS.gene84426:CDS |
| AGGGAAGATGAATTTAGGAA+TGG | 0.516981 | 7.4:+49049421 | MS.gene84426:CDS |
| GAACTTCAAAGATTGAAGCT+TGG | 0.517540 | 7.4:-49048650 | None:intergenic |
| AAGCTTTGAAAGGTATTGGA+TGG | 0.532498 | 7.4:+49049471 | MS.gene84426:CDS |
| TAGTGATGGAAGTGAAGGAA+TGG | 0.536155 | 7.4:+49049235 | MS.gene84426:CDS |
| GGGAAGATGAATTTAGGAAT+GGG | 0.537973 | 7.4:+49049422 | MS.gene84426:CDS |
| GGATGAGTTAGAGGAAGAGG+AGG | 0.538629 | 7.4:+49049355 | MS.gene84426:CDS |
| AAGTGAAGTTGAGTTTAGTG+AGG | 0.546215 | 7.4:+49049334 | MS.gene84426:CDS |
| AATAATAGTGATGGAAGTGA+AGG | 0.548220 | 7.4:+49049230 | MS.gene84426:CDS |
| AAGAAAGCAAAGAAACACTA+TGG | 0.554986 | 7.4:+49048970 | MS.gene84426:CDS |
| AGAAAAGTAACACAAAGAAA+GGG | 0.575353 | 7.4:+49049303 | MS.gene84426:CDS |
| AAATTCTCCAAAGCTTTGAA+AGG | 0.585068 | 7.4:+49049461 | MS.gene84426:CDS |
| TGAAAATGGATCCAAAGTGA+AGG | 0.588660 | 7.4:+49048998 | MS.gene84426:CDS |
| AAAAGAGTGGAGAAGGACAT+TGG | 0.588797 | 7.4:+49049181 | MS.gene84426:CDS |
| GAAAATGGATCCAAAGTGAA+GGG | 0.600047 | 7.4:+49048999 | MS.gene84426:CDS |
| AAAAGCAATTGGGAGTATGG+TGG | 0.613321 | 7.4:+49049092 | MS.gene84426:CDS |
| TGAAGCTGATGATAAAGATG+AGG | 0.620705 | 7.4:+49048584 | MS.gene84426:CDS |
| ATTGGATGGTTGCATCATGT+AGG | 0.636955 | 7.4:+49049485 | MS.gene84426:CDS |
| AGATGAATTTAGGAATGGGA+AGG | 0.640076 | 7.4:+49049426 | MS.gene84426:CDS |
| AAGCTTTGAAATTCTCAACA+GGG | 0.664595 | 7.4:+49049402 | MS.gene84426:CDS |
| AATGGAACAAGACAGTGAAG+AGG | 0.664688 | 7.4:-49048302 | None:intergenic |
| AAGCTTTGGAGAATTTGACA+AGG | 0.677569 | 7.4:-49049454 | None:intergenic |
| ATATGAGAAAGAATCAAACA+AGG | 0.721458 | 7.4:+49049274 | MS.gene84426:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAATAGGAAAAATATAA+AGG | - | chr7.4:49048351-49048370 | None:intergenic | 15.0% |
| !! | GAAAATAGGAAAAATATAAA+GGG | - | chr7.4:49048350-49048369 | None:intergenic | 15.0% |
| !! | AAAATATGGAGAAACATAAA+TGG | - | chr7.4:49048323-49048342 | None:intergenic | 20.0% |
| !! | TTGAATTTAGTATCCAATAT+AGG | - | chr7.4:49048942-49048961 | None:intergenic | 20.0% |
| !!! | GAAATATCTTCAATTGATTT+TGG | - | chr7.4:49048681-49048700 | None:intergenic | 20.0% |
| ! | AAAAGAGGTTTATTGTCAAA+TGG | + | chr7.4:49048743-49048762 | MS.gene84426:CDS | 25.0% |
| ! | AAAGAAAAGATAGGAGTTTA+AGG | - | chr7.4:49048392-49048411 | None:intergenic | 25.0% |
| ! | AAGAAAAGTAACACAAAGAA+AGG | + | chr7.4:49049302-49049321 | MS.gene84426:CDS | 25.0% |
| ! | AGAAAAGTAACACAAAGAAA+GGG | + | chr7.4:49049303-49049322 | MS.gene84426:CDS | 25.0% |
| ! | AGAAAGAAAAAAACACCATT+TGG | - | chr7.4:49048538-49048557 | None:intergenic | 25.0% |
| ! | ATATAAAGGGTGAGAAAATA+TGG | - | chr7.4:49048337-49048356 | None:intergenic | 25.0% |
| ! | ATATGAGAAAGAATCAAACA+AGG | + | chr7.4:49049274-49049293 | MS.gene84426:CDS | 25.0% |
| ! | GGATACTAAATTCAATAAAG+TGG | + | chr7.4:49048947-49048966 | MS.gene84426:CDS | 25.0% |
| !! | CAAAGACTAAATGAAGATTT+TGG | + | chr7.4:49049062-49049081 | MS.gene84426:CDS | 25.0% |
| !!! | TAACACTTTTTCTTCCTTAA+TGG | - | chr7.4:49048832-49048851 | None:intergenic | 25.0% |
| AAGAAAGCAAAGAAACACTA+TGG | + | chr7.4:49048970-49048989 | MS.gene84426:CDS | 30.0% | |
| ACAAAGGAGAAAGAAAAGAT+AGG | - | chr7.4:49048401-49048420 | None:intergenic | 30.0% | |
| AGAAAACAAAGTTGAGAAAG+TGG | + | chr7.4:49048794-49048813 | MS.gene84426:CDS | 30.0% | |
| AGAAAATGTGTCTTGTGAAA+AGG | + | chr7.4:49048896-49048915 | MS.gene84426:CDS | 30.0% | |
| GAGAGACATAATAATAGTGA+TGG | + | chr7.4:49049221-49049240 | MS.gene84426:CDS | 30.0% | |
| GATAGGAGTTTAAGGATATA+TGG | - | chr7.4:49048384-49048403 | None:intergenic | 30.0% | |
| GATGATAAAGATGAGGAAAT+TGG | + | chr7.4:49048591-49048610 | MS.gene84426:CDS | 30.0% | |
| TGAAAGTAAGAAAAGCAACA+AGG | - | chr7.4:49048446-49048465 | None:intergenic | 30.0% | |
| TGAAGAGAAAAAAGTGAACT+TGG | + | chr7.4:49048767-49048786 | MS.gene84426:CDS | 30.0% | |
| TGGAGAAAAGAAGAGAAAAT+AGG | - | chr7.4:49048364-49048383 | None:intergenic | 30.0% | |
| ! | AAATGAGTTGGAAGCATATT+TGG | + | chr7.4:49048620-49048639 | MS.gene84426:CDS | 30.0% |
| ! | AATAATAGTGATGGAAGTGA+AGG | + | chr7.4:49049230-49049249 | MS.gene84426:CDS | 30.0% |
| ! | GAAGAAGTTTGTTCTAATCT+TGG | + | chr7.4:49049134-49049153 | MS.gene84426:CDS | 30.0% |
| ! | GTTTTCAGTTGAAGAAAAAG+AGG | + | chr7.4:49048728-49048747 | MS.gene84426:CDS | 30.0% |
| ! | TGTTCTAATCTTGGAAGTTT+TGG | + | chr7.4:49049143-49049162 | MS.gene84426:CDS | 30.0% |
| !! | AAATTCTCCAAAGCTTTGAA+AGG | + | chr7.4:49049461-49049480 | MS.gene84426:CDS | 30.0% |
| !! | AAGCTTTGAAATTCTCAACA+GGG | + | chr7.4:49049402-49049421 | MS.gene84426:CDS | 30.0% |
| !! | AATTGGTTTGCTAAATGAGT+TGG | + | chr7.4:49048608-49048627 | MS.gene84426:CDS | 30.0% |
| !! | TTTTGCAAACTTTTCTAGCA+TGG | + | chr7.4:49048559-49048578 | MS.gene84426:intron | 30.0% |
| AAGTGAAGTTGAGTTTAGTG+AGG | + | chr7.4:49049334-49049353 | MS.gene84426:CDS | 35.0% | |
| ACACTATGGTCCATTGAAAA+TGG | + | chr7.4:49048984-49049003 | MS.gene84426:CDS | 35.0% | |
| AGAAGTAGTCAAGCCTATAT+TGG | + | chr7.4:49048926-49048945 | MS.gene84426:CDS | 35.0% | |
| AGAGAACTCATTGTTCTTGT+TGG | - | chr7.4:49048277-49048296 | None:intergenic | 35.0% | |
| AGATGAATTTAGGAATGGGA+AGG | + | chr7.4:49049426-49049445 | MS.gene84426:CDS | 35.0% | |
| AGGGAAGATGAATTTAGGAA+TGG | + | chr7.4:49049421-49049440 | MS.gene84426:CDS | 35.0% | |
| CCAAACCTTGTTCATCATAA+GGG | + | chr7.4:49048468-49048487 | MS.gene84426:intron | 35.0% | |
| GAAAATGGATCCAAAGTGAA+GGG | + | chr7.4:49048999-49049018 | MS.gene84426:CDS | 35.0% | |
| GAACTTCAAAGATTGAAGCT+TGG | - | chr7.4:49048653-49048672 | None:intergenic | 35.0% | |
| GGGAAGATGAATTTAGGAAT+GGG | + | chr7.4:49049422-49049441 | MS.gene84426:CDS | 35.0% | |
| TACTACCCTTATGATGAACA+AGG | - | chr7.4:49048476-49048495 | None:intergenic | 35.0% | |
| TCAACAGGGAAGATGAATTT+AGG | + | chr7.4:49049416-49049435 | MS.gene84426:CDS | 35.0% | |
| TCCAAACCTTGTTCATCATA+AGG | + | chr7.4:49048467-49048486 | MS.gene84426:intron | 35.0% | |
| TCCAATACCTTTCAAAGCTT+TGG | - | chr7.4:49049471-49049490 | None:intergenic | 35.0% | |
| TGAAAATGGATCCAAAGTGA+AGG | + | chr7.4:49048998-49049017 | MS.gene84426:CDS | 35.0% | |
| TGAAGCTGATGATAAAGATG+AGG | + | chr7.4:49048584-49048603 | MS.gene84426:CDS | 35.0% | |
| TGAAGGAATGGATATGCTTT+GGG | + | chr7.4:49049247-49049266 | MS.gene84426:CDS | 35.0% | |
| TGGAAGTCCAAAAAGCAATT+GGG | + | chr7.4:49049082-49049101 | MS.gene84426:CDS | 35.0% | |
| TTGAGAGTTATGAGTCCAAA+TGG | + | chr7.4:49048520-49048539 | MS.gene84426:intron | 35.0% | |
| TTGGAAGTCCAAAAAGCAAT+TGG | + | chr7.4:49049081-49049100 | MS.gene84426:CDS | 35.0% | |
| TTGGAGAATTTGACAAGGTT+AGG | - | chr7.4:49049452-49049471 | None:intergenic | 35.0% | |
| ! | AGAGTAGTGGTAATGAACAA+AGG | - | chr7.4:49048417-49048436 | None:intergenic | 35.0% |
| ! | AGTATGGTGGAAAAGGTATA+GGG | + | chr7.4:49049105-49049124 | MS.gene84426:CDS | 35.0% |
| ! | CACTTTGGATCCATTTTCAA+TGG | - | chr7.4:49048997-49049016 | None:intergenic | 35.0% |
| !! | AAGCTTTGAAAGGTATTGGA+TGG | + | chr7.4:49049471-49049490 | MS.gene84426:CDS | 35.0% |
| !! | AAGCTTTGGAGAATTTGACA+AGG | - | chr7.4:49049457-49049476 | None:intergenic | 35.0% |
| !! | CAAGCTTTGAAATTCTCAAC+AGG | + | chr7.4:49049401-49049420 | MS.gene84426:CDS | 35.0% |
| !! | TCCAAAGCTTTGAAAGGTAT+TGG | + | chr7.4:49049467-49049486 | MS.gene84426:CDS | 35.0% |
| !!! | AAGTTTTGGTTCAATGAGAG+TGG | + | chr7.4:49049157-49049176 | MS.gene84426:CDS | 35.0% |
| AAAAGAGTGGAGAAGGACAT+TGG | + | chr7.4:49049181-49049200 | MS.gene84426:CDS | 40.0% | |
| AACAAGGAGAAGAAGAGTAG+TGG | - | chr7.4:49048430-49048449 | None:intergenic | 40.0% | |
| AATGGAACAAGACAGTGAAG+AGG | - | chr7.4:49048305-49048324 | None:intergenic | 40.0% | |
| ATTGGATGGTTGCATCATGT+AGG | + | chr7.4:49049485-49049504 | MS.gene84426:CDS | 40.0% | |
| CAATGAGAGTGGAAAAAGAG+TGG | + | chr7.4:49049168-49049187 | MS.gene84426:CDS | 40.0% | |
| CCAAAAAGCAATTGGGAGTA+TGG | + | chr7.4:49049089-49049108 | MS.gene84426:CDS | 40.0% | |
| CCCTTATGATGAACAAGGTT+TGG | - | chr7.4:49048471-49048490 | None:intergenic | 40.0% | |
| GGACGTAGTTGAATCCATTA+AGG | + | chr7.4:49048815-49048834 | MS.gene84426:CDS | 40.0% | |
| GTCTCTATTACCCTTCACTT+TGG | - | chr7.4:49049012-49049031 | None:intergenic | 40.0% | |
| GTGAAGGAATGGATATGCTT+TGG | + | chr7.4:49049246-49049265 | MS.gene84426:CDS | 40.0% | |
| GTTTAGTGAGGATGAGTTAG+AGG | + | chr7.4:49049346-49049365 | MS.gene84426:CDS | 40.0% | |
| TTGCATCATGTAGGCAAGAA+TGG | + | chr7.4:49049494-49049513 | MS.gene84426:CDS | 40.0% | |
| ! | AAAAGCAATTGGGAGTATGG+TGG | + | chr7.4:49049092-49049111 | MS.gene84426:CDS | 40.0% |
| ! | AATTGGGAGTATGGTGGAAA+AGG | + | chr7.4:49049098-49049117 | MS.gene84426:CDS | 40.0% |
| ! | GAGTATGGTGGAAAAGGTAT+AGG | + | chr7.4:49049104-49049123 | MS.gene84426:CDS | 40.0% |
| ! | TAGTGATGGAAGTGAAGGAA+TGG | + | chr7.4:49049235-49049254 | MS.gene84426:CDS | 40.0% |
| !! | CCATACTCCCAATTGCTTTT+TGG | - | chr7.4:49049092-49049111 | None:intergenic | 40.0% |
| !!! | ATTGGCTTGCAAGCTTTTTG+AGG | + | chr7.4:49049199-49049218 | MS.gene84426:CDS | 40.0% |
| GAGTGGAAAAAGAGTGGAGA+AGG | + | chr7.4:49049174-49049193 | MS.gene84426:CDS | 45.0% | |
| TGAGGATGAGTTAGAGGAAG+AGG | + | chr7.4:49049352-49049371 | MS.gene84426:CDS | 45.0% | |
| GAGTTAGAGGAAGAGGAGGT+AGG | + | chr7.4:49049359-49049378 | MS.gene84426:CDS | 50.0% | |
| GGATGAGTTAGAGGAAGAGG+AGG | + | chr7.4:49049355-49049374 | MS.gene84426:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 49048246 | 49049535 | 49048246 | ID=MS.gene84426 |
| chr7.4 | mRNA | 49048246 | 49049535 | 49048246 | ID=MS.gene84426.t1;Parent=MS.gene84426 |
| chr7.4 | exon | 49048246 | 49048327 | 49048246 | ID=MS.gene84426.t1.exon1;Parent=MS.gene84426.t1 |
| chr7.4 | CDS | 49048246 | 49048327 | 49048246 | ID=cds.MS.gene84426.t1;Parent=MS.gene84426.t1 |
| chr7.4 | exon | 49048577 | 49049535 | 49048577 | ID=MS.gene84426.t1.exon2;Parent=MS.gene84426.t1 |
| chr7.4 | CDS | 49048577 | 49049535 | 49048577 | ID=cds.MS.gene84426.t1;Parent=MS.gene84426.t1 |
| Gene Sequence |
| Protein sequence |
