Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78230.t1 | XP_024627009.1 | 99 | 393 | 3 | 1 | 1 | 392 | 1 | 393 | 1.30E-222 | 781.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78230.t1 | A0A072U0Z3 | 99.0 | 393 | 3 | 1 | 1 | 392 | 1 | 393 | 9.7e-223 | 781.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene78230 | 0.826087 | 3.29E-54 | -1.69E-46 |
| MS.gene049254 | MS.gene78230 | 0.820414 | 6.95E-53 | -1.69E-46 |
| MS.gene049264 | MS.gene78230 | 0.855201 | 7.40E-62 | -1.69E-46 |
| MS.gene049378 | MS.gene78230 | 0.838779 | 2.35E-57 | -1.69E-46 |
| MS.gene049647 | MS.gene78230 | 0.831601 | 1.52E-55 | -1.69E-46 |
| MS.gene049786 | MS.gene78230 | 0.81726 | 3.62E-52 | -1.69E-46 |
| MS.gene049801 | MS.gene78230 | 0.822951 | 1.80E-53 | -1.69E-46 |
| MS.gene049983 | MS.gene78230 | 0.812552 | 4.00E-51 | -1.69E-46 |
| MS.gene050105 | MS.gene78230 | 0.836671 | 8.16E-57 | -1.69E-46 |
| MS.gene050442 | MS.gene78230 | 0.830643 | 2.62E-55 | -1.69E-46 |
| MS.gene050556 | MS.gene78230 | 0.819168 | 1.34E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene78230 | 0.812589 | 3.93E-51 | -1.69E-46 |
| MS.gene050657 | MS.gene78230 | 0.803002 | 4.29E-49 | -1.69E-46 |
| MS.gene050737 | MS.gene78230 | 0.808724 | 2.69E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene78230 | 0.812719 | 3.68E-51 | -1.69E-46 |
| MS.gene050762 | MS.gene78230 | 0.81493 | 1.20E-51 | -1.69E-46 |
| MS.gene050763 | MS.gene78230 | 0.814852 | 1.25E-51 | -1.69E-46 |
| MS.gene050826 | MS.gene78230 | 0.853742 | 1.95E-61 | -1.69E-46 |
| MS.gene050941 | MS.gene78230 | 0.818247 | 2.17E-52 | -1.69E-46 |
| MS.gene051122 | MS.gene78230 | 0.840676 | 7.53E-58 | -1.69E-46 |
| MS.gene051210 | MS.gene78230 | 0.831472 | 1.64E-55 | -1.69E-46 |
| MS.gene051332 | MS.gene78230 | 0.801149 | 1.03E-48 | -1.69E-46 |
| MS.gene051490 | MS.gene78230 | 0.816977 | 4.19E-52 | -1.69E-46 |
| MS.gene051541 | MS.gene78230 | 0.803419 | 3.52E-49 | -1.69E-46 |
| MS.gene051800 | MS.gene78230 | 0.803237 | 3.84E-49 | -1.69E-46 |
| MS.gene051924 | MS.gene78230 | -0.821898 | 3.16E-53 | -1.69E-46 |
| MS.gene051935 | MS.gene78230 | 0.853911 | 1.75E-61 | -1.69E-46 |
| MS.gene052052 | MS.gene78230 | 0.807507 | 4.89E-50 | -1.69E-46 |
| MS.gene052108 | MS.gene78230 | 0.807434 | 5.06E-50 | -1.69E-46 |
| MS.gene05216 | MS.gene78230 | 0.849033 | 4.19E-60 | -1.69E-46 |
| MS.gene052333 | MS.gene78230 | 0.833052 | 6.66E-56 | -1.69E-46 |
| MS.gene052463 | MS.gene78230 | 0.816853 | 4.46E-52 | -1.69E-46 |
| MS.gene052493 | MS.gene78230 | 0.838517 | 2.74E-57 | -1.69E-46 |
| MS.gene052586 | MS.gene78230 | 0.813727 | 2.21E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene78230 | 0.87846 | 2.76E-69 | -1.69E-46 |
| MS.gene052675 | MS.gene78230 | 0.877088 | 8.31E-69 | -1.69E-46 |
| MS.gene052677 | MS.gene78230 | 0.87925 | 1.45E-69 | -1.69E-46 |
| MS.gene052773 | MS.gene78230 | 0.801377 | 9.27E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene78230 | 0.81754 | 3.13E-52 | -1.69E-46 |
| MS.gene05350 | MS.gene78230 | 0.805862 | 1.09E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene78230 | 0.813301 | 2.74E-51 | -1.69E-46 |
| MS.gene054236 | MS.gene78230 | 0.815731 | 7.95E-52 | -1.69E-46 |
| MS.gene054291 | MS.gene78230 | -0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene78230 | 0.818893 | 1.55E-52 | -1.69E-46 |
| MS.gene054467 | MS.gene78230 | 0.830937 | 2.22E-55 | -1.69E-46 |
| MS.gene054468 | MS.gene78230 | 0.861536 | 9.58E-64 | -1.69E-46 |
| MS.gene054479 | MS.gene78230 | 0.883956 | 2.89E-71 | -1.69E-46 |
| MS.gene054576 | MS.gene78230 | 0.82419 | 9.23E-54 | -1.69E-46 |
| MS.gene054641 | MS.gene78230 | 0.804909 | 1.72E-49 | -1.69E-46 |
| MS.gene054826 | MS.gene78230 | 0.804022 | 2.64E-49 | -1.69E-46 |
| MS.gene054875 | MS.gene78230 | 0.803074 | 4.15E-49 | -1.69E-46 |
| MS.gene054943 | MS.gene78230 | 0.807075 | 6.03E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene78230 | 0.813792 | 2.14E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene78230 | 0.857277 | 1.82E-62 | -1.69E-46 |
| MS.gene055724 | MS.gene78230 | 0.801314 | 9.54E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene78230 | 0.809138 | 2.19E-50 | -1.69E-46 |
| MS.gene055864 | MS.gene78230 | 0.839754 | 1.31E-57 | -1.69E-46 |
| MS.gene055926 | MS.gene78230 | 0.850022 | 2.22E-60 | -1.69E-46 |
| MS.gene05604 | MS.gene78230 | 0.819346 | 1.22E-52 | -1.69E-46 |
| MS.gene056480 | MS.gene78230 | 0.826865 | 2.15E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene78230 | 0.809944 | 1.47E-50 | -1.69E-46 |
| MS.gene056776 | MS.gene78230 | 0.806376 | 8.48E-50 | -1.69E-46 |
| MS.gene056779 | MS.gene78230 | 0.853287 | 2.64E-61 | -1.69E-46 |
| MS.gene057026 | MS.gene78230 | 0.844121 | 9.20E-59 | -1.69E-46 |
| MS.gene057055 | MS.gene78230 | 0.803962 | 2.71E-49 | -1.69E-46 |
| MS.gene057155 | MS.gene78230 | 0.821254 | 4.45E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene78230 | 0.806154 | 9.44E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene78230 | 0.84624 | 2.46E-59 | -1.69E-46 |
| MS.gene058081 | MS.gene78230 | 0.835589 | 1.54E-56 | -1.69E-46 |
| MS.gene058223 | MS.gene78230 | -0.831501 | 1.61E-55 | -1.69E-46 |
| MS.gene058289 | MS.gene78230 | 0.825532 | 4.45E-54 | -1.69E-46 |
| MS.gene058429 | MS.gene78230 | 0.805804 | 1.12E-49 | -1.69E-46 |
| MS.gene058636 | MS.gene78230 | 0.800186 | 1.62E-48 | -1.69E-46 |
| MS.gene058639 | MS.gene78230 | 0.801027 | 1.09E-48 | -1.69E-46 |
| MS.gene058897 | MS.gene78230 | 0.802016 | 6.85E-49 | -1.69E-46 |
| MS.gene059283 | MS.gene78230 | 0.820561 | 6.43E-53 | -1.69E-46 |
| MS.gene059438 | MS.gene78230 | 0.826139 | 3.20E-54 | -1.69E-46 |
| MS.gene059439 | MS.gene78230 | 0.844958 | 5.47E-59 | -1.69E-46 |
| MS.gene059440 | MS.gene78230 | 0.832106 | 1.14E-55 | -1.69E-46 |
| MS.gene059570 | MS.gene78230 | 0.809016 | 2.33E-50 | -1.69E-46 |
| MS.gene059725 | MS.gene78230 | 0.802771 | 4.79E-49 | -1.69E-46 |
| MS.gene059952 | MS.gene78230 | 0.873294 | 1.64E-67 | -1.69E-46 |
| MS.gene059965 | MS.gene78230 | 0.813077 | 3.07E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene78230 | 0.809345 | 1.98E-50 | -1.69E-46 |
| MS.gene060122 | MS.gene78230 | -0.813804 | 2.13E-51 | -1.69E-46 |
| MS.gene060167 | MS.gene78230 | 0.800129 | 1.67E-48 | -1.69E-46 |
| MS.gene060191 | MS.gene78230 | 0.815947 | 7.12E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene78230 | 0.808214 | 3.46E-50 | -1.69E-46 |
| MS.gene060373 | MS.gene78230 | 0.832132 | 1.13E-55 | -1.69E-46 |
| MS.gene060380 | MS.gene78230 | 0.801543 | 8.57E-49 | -1.69E-46 |
| MS.gene060435 | MS.gene78230 | 0.815259 | 1.01E-51 | -1.69E-46 |
| MS.gene060520 | MS.gene78230 | 0.806971 | 6.35E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene78230 | 0.870882 | 1.04E-66 | -1.69E-46 |
| MS.gene060637 | MS.gene78230 | 0.823624 | 1.25E-53 | -1.69E-46 |
| MS.gene060683 | MS.gene78230 | 0.820944 | 5.25E-53 | -1.69E-46 |
| MS.gene060685 | MS.gene78230 | 0.821011 | 5.06E-53 | -1.69E-46 |
| MS.gene060777 | MS.gene78230 | 0.829563 | 4.80E-55 | -1.69E-46 |
| MS.gene060802 | MS.gene78230 | 0.813162 | 2.94E-51 | -1.69E-46 |
| MS.gene060850 | MS.gene78230 | 0.83312 | 6.40E-56 | -1.69E-46 |
| MS.gene060851 | MS.gene78230 | 0.851359 | 9.34E-61 | -1.69E-46 |
| MS.gene060852 | MS.gene78230 | 0.850237 | 1.93E-60 | -1.69E-46 |
| MS.gene06089 | MS.gene78230 | 0.804713 | 1.89E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene78230 | 0.843757 | 1.15E-58 | -1.69E-46 |
| MS.gene060998 | MS.gene78230 | 0.827286 | 1.70E-54 | -1.69E-46 |
| MS.gene06121 | MS.gene78230 | 0.853408 | 2.44E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78230.t1 | MTR_7g059110 | 98.982 | 393 | 3 | 1 | 1 | 392 | 1 | 393 | 0.0 | 796 |
| MS.gene78230.t1 | MTR_7g059110 | 89.822 | 393 | 2 | 2 | 1 | 392 | 1 | 356 | 0.0 | 657 |
| MS.gene78230.t1 | MTR_4g113730 | 38.545 | 275 | 122 | 7 | 19 | 291 | 43 | 272 | 1.12e-57 | 192 |
| MS.gene78230.t1 | MTR_3g073240 | 61.165 | 103 | 40 | 0 | 180 | 282 | 128 | 230 | 6.48e-38 | 139 |
| MS.gene78230.t1 | MTR_3g073240 | 46.591 | 88 | 41 | 2 | 24 | 111 | 48 | 129 | 3.56e-16 | 79.0 |
| MS.gene78230.t1 | MTR_4g094420 | 46.939 | 147 | 67 | 2 | 141 | 279 | 90 | 233 | 2.74e-36 | 136 |
| MS.gene78230.t1 | MTR_4g094420 | 70.000 | 50 | 15 | 0 | 19 | 68 | 46 | 95 | 7.03e-19 | 87.8 |
| MS.gene78230.t1 | MTR_1g009790 | 46.479 | 142 | 71 | 2 | 174 | 315 | 94 | 230 | 1.80e-33 | 127 |
| MS.gene78230.t1 | MTR_1g009790 | 62.069 | 58 | 22 | 0 | 10 | 67 | 12 | 69 | 2.97e-16 | 79.3 |
| MS.gene78230.t1 | MTR_1g009790 | 46.479 | 142 | 71 | 2 | 174 | 315 | 94 | 230 | 2.67e-33 | 127 |
| MS.gene78230.t1 | MTR_1g009790 | 62.069 | 58 | 22 | 0 | 10 | 67 | 12 | 69 | 4.84e-16 | 79.0 |
| MS.gene78230.t1 | MTR_8g085870 | 50.000 | 90 | 45 | 0 | 177 | 266 | 131 | 220 | 4.77e-25 | 106 |
| MS.gene78230.t1 | MTR_8g085870 | 52.113 | 71 | 34 | 0 | 19 | 89 | 41 | 111 | 1.57e-17 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78230.t1 | AT3G24740 | 51.323 | 378 | 123 | 9 | 1 | 367 | 1 | 328 | 1.41e-113 | 336 |
| MS.gene78230.t1 | AT3G24740 | 51.323 | 378 | 123 | 9 | 1 | 367 | 1 | 328 | 1.41e-113 | 336 |
| MS.gene78230.t1 | AT3G24740 | 51.323 | 378 | 123 | 9 | 1 | 367 | 1 | 328 | 1.41e-113 | 336 |
| MS.gene78230.t1 | AT3G24740 | 51.323 | 378 | 123 | 9 | 1 | 367 | 1 | 328 | 1.41e-113 | 336 |
| MS.gene78230.t1 | AT3G24740 | 51.323 | 378 | 123 | 9 | 1 | 367 | 1 | 328 | 1.41e-113 | 336 |
| MS.gene78230.t1 | AT3G24740 | 51.323 | 378 | 123 | 9 | 1 | 367 | 1 | 328 | 1.41e-113 | 336 |
| MS.gene78230.t1 | AT3G25910 | 36.965 | 257 | 139 | 4 | 19 | 275 | 36 | 269 | 2.14e-50 | 174 |
| MS.gene78230.t1 | AT4G31410 | 48.889 | 135 | 64 | 1 | 182 | 316 | 102 | 231 | 1.94e-35 | 132 |
| MS.gene78230.t1 | AT4G31410 | 55.357 | 56 | 23 | 1 | 22 | 77 | 30 | 83 | 2.03e-14 | 73.9 |
| MS.gene78230.t1 | AT4G31410 | 48.889 | 135 | 64 | 1 | 182 | 316 | 102 | 231 | 1.94e-35 | 132 |
| MS.gene78230.t1 | AT4G31410 | 55.357 | 56 | 23 | 1 | 22 | 77 | 30 | 83 | 2.03e-14 | 73.9 |
| MS.gene78230.t1 | AT4G31410 | 48.889 | 135 | 64 | 1 | 182 | 316 | 102 | 231 | 1.94e-35 | 132 |
| MS.gene78230.t1 | AT4G31410 | 55.357 | 56 | 23 | 1 | 22 | 77 | 30 | 83 | 2.03e-14 | 73.9 |
| MS.gene78230.t1 | AT4G08460 | 48.624 | 109 | 56 | 0 | 175 | 283 | 100 | 208 | 6.59e-33 | 124 |
| MS.gene78230.t1 | AT4G08460 | 51.786 | 56 | 25 | 1 | 24 | 77 | 47 | 102 | 5.14e-14 | 72.0 |
| MS.gene78230.t1 | AT4G08460 | 48.624 | 109 | 56 | 0 | 175 | 283 | 100 | 208 | 6.59e-33 | 124 |
| MS.gene78230.t1 | AT4G08460 | 51.786 | 56 | 25 | 1 | 24 | 77 | 47 | 102 | 5.14e-14 | 72.0 |
| MS.gene78230.t1 | AT4G08460 | 48.624 | 109 | 56 | 0 | 175 | 283 | 100 | 208 | 6.59e-33 | 124 |
| MS.gene78230.t1 | AT4G08460 | 51.786 | 56 | 25 | 1 | 24 | 77 | 47 | 102 | 5.14e-14 | 72.0 |
| MS.gene78230.t1 | AT4G08460 | 48.624 | 109 | 56 | 0 | 175 | 283 | 100 | 208 | 6.59e-33 | 124 |
| MS.gene78230.t1 | AT4G08460 | 51.786 | 56 | 25 | 1 | 24 | 77 | 47 | 102 | 5.14e-14 | 72.0 |
| MS.gene78230.t1 | AT1G68140 | 47.115 | 104 | 55 | 0 | 180 | 283 | 118 | 221 | 8.93e-30 | 117 |
| MS.gene78230.t1 | AT1G68140 | 68.000 | 50 | 16 | 0 | 19 | 68 | 48 | 97 | 1.37e-17 | 83.2 |
| MS.gene78230.t1 | AT1G68140 | 47.115 | 104 | 55 | 0 | 180 | 283 | 118 | 221 | 1.29e-29 | 117 |
| MS.gene78230.t1 | AT1G68140 | 68.000 | 50 | 16 | 0 | 19 | 68 | 48 | 97 | 1.49e-17 | 83.6 |
| MS.gene78230.t1 | AT1G68140 | 47.115 | 104 | 55 | 0 | 180 | 283 | 118 | 221 | 1.29e-29 | 117 |
| MS.gene78230.t1 | AT1G68140 | 68.000 | 50 | 16 | 0 | 19 | 68 | 48 | 97 | 1.49e-17 | 83.6 |
| MS.gene78230.t1 | AT1G68140 | 47.115 | 104 | 55 | 0 | 180 | 283 | 118 | 221 | 1.29e-29 | 117 |
| MS.gene78230.t1 | AT1G68140 | 68.000 | 50 | 16 | 0 | 19 | 68 | 48 | 97 | 1.49e-17 | 83.6 |
| MS.gene78230.t1 | AT1G77770 | 49.000 | 100 | 51 | 0 | 180 | 279 | 85 | 184 | 6.73e-27 | 108 |
| MS.gene78230.t1 | AT1G77770 | 50.000 | 66 | 32 | 1 | 19 | 83 | 24 | 89 | 3.08e-14 | 72.8 |
| MS.gene78230.t1 | AT1G77770 | 49.000 | 100 | 51 | 0 | 180 | 279 | 85 | 184 | 6.73e-27 | 108 |
| MS.gene78230.t1 | AT1G77770 | 50.000 | 66 | 32 | 1 | 19 | 83 | 24 | 89 | 3.08e-14 | 72.8 |
| MS.gene78230.t1 | AT1G77770 | 49.000 | 100 | 51 | 0 | 180 | 279 | 85 | 184 | 6.94e-27 | 108 |
| MS.gene78230.t1 | AT1G77770 | 55.556 | 54 | 24 | 0 | 19 | 72 | 24 | 77 | 2.83e-14 | 72.8 |
| MS.gene78230.t1 | AT2G26050 | 42.353 | 85 | 48 | 1 | 179 | 262 | 71 | 155 | 1.18e-16 | 79.0 |
| MS.gene78230.t1 | AT1G15430 | 39.535 | 86 | 52 | 0 | 179 | 264 | 106 | 191 | 1.43e-16 | 79.3 |
| MS.gene78230.t1 | AT1G15430 | 63.830 | 47 | 17 | 0 | 20 | 66 | 47 | 93 | 6.39e-14 | 71.6 |
| MS.gene78230.t1 | AT1G15430 | 39.535 | 86 | 52 | 0 | 179 | 264 | 106 | 191 | 1.43e-16 | 79.3 |
| MS.gene78230.t1 | AT1G15430 | 63.830 | 47 | 17 | 0 | 20 | 66 | 47 | 93 | 6.39e-14 | 71.6 |
| MS.gene78230.t1 | AT1G80220 | 39.806 | 103 | 59 | 2 | 179 | 280 | 100 | 200 | 2.35e-16 | 78.6 |
| MS.gene78230.t1 | AT1G80220 | 53.571 | 56 | 22 | 1 | 22 | 73 | 43 | 98 | 9.66e-12 | 65.1 |
Find 107 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAAAGAACTTTGTAAATT+TGG | 0.086986 | 7.4:-44378173 | None:intergenic |
| CTGACCGTCGTCGCTATCTT+TGG | 0.205802 | 7.4:+44378960 | MS.gene78230:CDS |
| CTCATTTGCTGGAGATTATC+TGG | 0.236537 | 7.4:+44378586 | MS.gene78230:CDS |
| GGGGATTACGTTCTCGAAAA+TGG | 0.268380 | 7.4:+44378764 | MS.gene78230:CDS |
| ACATTTGTGATACAAGTTAT+AGG | 0.274353 | 7.4:+44378096 | MS.gene78230:CDS |
| CTATGTAGGGGCACAGTATT+AGG | 0.283301 | 7.4:+44378494 | MS.gene78230:CDS |
| TTAAAGAACTTTGTAAATTT+GGG | 0.285619 | 7.4:-44378172 | None:intergenic |
| ATAGAGTATTAATTTCATTT+TGG | 0.288715 | 7.4:-44378283 | None:intergenic |
| CAATGGTGTTATCCATCATT+TGG | 0.297444 | 7.4:-44378877 | None:intergenic |
| TGACCGTCGTCGCTATCTTT+GGG | 0.306879 | 7.4:+44378961 | MS.gene78230:CDS |
| ATAACACCATTGAAATTGTT+AGG | 0.318676 | 7.4:+44378888 | MS.gene78230:CDS |
| TGCCACGCTTGTTCTCTTGT+CGG | 0.342123 | 7.4:-44378665 | None:intergenic |
| AGGGATTCATGCTCATTTGC+TGG | 0.342371 | 7.4:+44378575 | MS.gene78230:CDS |
| TTTGAGCGCCAGAGAGAATA+TGG | 0.354225 | 7.4:+44378692 | MS.gene78230:CDS |
| TACCAGGAGCTGTGGTAGTT+GGG | 0.361459 | 7.4:+44378744 | MS.gene78230:CDS |
| CTAAATGTCTACTTGGATCT+TGG | 0.362438 | 7.4:-44378346 | None:intergenic |
| GTTTGCATTGTCCTCTATGT+AGG | 0.375371 | 7.4:+44378480 | MS.gene78230:CDS |
| TACCAGGTGGTGGTAGGGAG+GGG | 0.376072 | 7.4:+44378804 | MS.gene78230:CDS |
| CTTTGGGGTGAGAATTTGTT+GGG | 0.387062 | 7.4:+44378977 | MS.gene78230:CDS |
| TCTACGAATATTTAATGAAC+TGG | 0.389467 | 7.4:+44379027 | MS.gene78230:CDS |
| GTTAATATCAAAACTATTAC+CGG | 0.394163 | 7.4:-44378213 | None:intergenic |
| GCATGCTCTTCACAGAGAAT+TGG | 0.394274 | 7.4:+44377986 | MS.gene78230:CDS |
| TTCAAACGACGGCGCCTCCT+TGG | 0.409832 | 7.4:-44379070 | None:intergenic |
| TTATAGGCATTCAAATTGTC+TGG | 0.411863 | 7.4:+44378112 | MS.gene78230:CDS |
| TGCTGATTCTGAGAACTTGC+AGG | 0.412339 | 7.4:+44378397 | MS.gene78230:CDS |
| ATAAACACTAACAACTCTTC+CGG | 0.422488 | 7.4:+44378194 | MS.gene78230:CDS |
| ACTTTGCAGCTCTCATGATA+AGG | 0.425611 | 7.4:+44378061 | MS.gene78230:CDS |
| ATTAATACTCTATTGTCTGT+TGG | 0.425972 | 7.4:+44378293 | MS.gene78230:CDS |
| CCATTTGAAGAACGAGCTCT+TGG | 0.431014 | 7.4:-44378914 | None:intergenic |
| TCTTTGGGGTGAGAATTTGT+TGG | 0.432599 | 7.4:+44378976 | MS.gene78230:CDS |
| CCAAGAGCTCGTTCTTCAAA+TGG | 0.433577 | 7.4:+44378914 | MS.gene78230:CDS |
| ATTCTGAGAACTTGCAGGAC+AGG | 0.434425 | 7.4:+44378402 | MS.gene78230:CDS |
| TAAATGTCTACTTGGATCTT+GGG | 0.439889 | 7.4:-44378345 | None:intergenic |
| TTTGCATTGTCCTCTATGTA+GGG | 0.447980 | 7.4:+44378481 | MS.gene78230:CDS |
| CACCATCTTGTTCCAAATGA+TGG | 0.449976 | 7.4:+44378865 | MS.gene78230:CDS |
| GGAGGCGCCGTCGTTTGAAT+AGG | 0.452971 | 7.4:+44379074 | MS.gene78230:CDS |
| TCAAACGACGGCGCCTCCTT+GGG | 0.458119 | 7.4:-44379069 | None:intergenic |
| TGGTTCCCTAACAATTTCAA+TGG | 0.459007 | 7.4:-44378894 | None:intergenic |
| CTTTGCAGCTCTCATGATAA+GGG | 0.464712 | 7.4:+44378062 | MS.gene78230:CDS |
| GTTACCAGGTGGTGGTAGGG+AGG | 0.472492 | 7.4:+44378802 | MS.gene78230:CDS |
| TAACACCATTGAAATTGTTA+GGG | 0.485966 | 7.4:+44378889 | MS.gene78230:CDS |
| CAATATCACCATATTCTCTC+TGG | 0.489351 | 7.4:-44378700 | None:intergenic |
| CTCGAAAATGGAGATGGTAT+TGG | 0.491652 | 7.4:+44378776 | MS.gene78230:CDS |
| TTGGAACAAGATGGTGGTAG+TGG | 0.494227 | 7.4:-44378858 | None:intergenic |
| GATGGTATTGGTAGGTTACC+AGG | 0.501983 | 7.4:+44378788 | MS.gene78230:CDS |
| GCAGGACAGGGCTGTTCTTG+AGG | 0.502162 | 7.4:+44378415 | MS.gene78230:CDS |
| TGTGGATGGTCCATGCAGAT+AGG | 0.502449 | 7.4:-44378023 | None:intergenic |
| AATTCCACAAGGATCGAGAC+AGG | 0.502538 | 7.4:+44378316 | MS.gene78230:CDS |
| GTAGGTTACCAGGTGGTGGT+AGG | 0.505182 | 7.4:+44378798 | MS.gene78230:CDS |
| ATACCAGGAGCTGTGGTAGT+TGG | 0.506423 | 7.4:+44378743 | MS.gene78230:CDS |
| GTAGGGGCACAGTATTAGGC+TGG | 0.509672 | 7.4:+44378498 | MS.gene78230:CDS |
| TGGAATTGCGTAGGCATGCT+AGG | 0.511583 | 7.4:+44378606 | MS.gene78230:CDS |
| TAGGTTACCAGGTGGTGGTA+GGG | 0.512795 | 7.4:+44378799 | MS.gene78230:CDS |
| GACCGTCGTCGCTATCTTTG+GGG | 0.514814 | 7.4:+44378962 | MS.gene78230:CDS |
| GCTATTCAGTCTGCCATACC+AGG | 0.516031 | 7.4:+44378728 | MS.gene78230:CDS |
| TGTTGGTCTAAATGTCTACT+TGG | 0.518204 | 7.4:-44378353 | None:intergenic |
| CAAACTCGACTTTGAGTCCT+CGG | 0.522532 | 7.4:-44378462 | None:intergenic |
| GGTGGTAGGGAGGGGAGCAA+TGG | 0.523498 | 7.4:+44378812 | MS.gene78230:CDS |
| CTAAAATGCCTTCATCATGT+TGG | 0.523887 | 7.4:-44378370 | None:intergenic |
| ACATCAGAGGGACGAGAAGT+AGG | 0.527291 | 7.4:-44378638 | None:intergenic |
| TATCATGAGAGCTGCAAAGT+AGG | 0.528215 | 7.4:-44378058 | None:intergenic |
| CAATCATGAATGATCTTCGT+TGG | 0.532620 | 7.4:-44379104 | None:intergenic |
| TTCTGAGAACTTGCAGGACA+GGG | 0.533978 | 7.4:+44378403 | MS.gene78230:CDS |
| ATTGGTAGGTTACCAGGTGG+TGG | 0.534392 | 7.4:+44378794 | MS.gene78230:CDS |
| TTACCAGGTGGTGGTAGGGA+GGG | 0.536579 | 7.4:+44378803 | MS.gene78230:CDS |
| CTCCCCTCCCTACCACCACC+TGG | 0.537599 | 7.4:-44378806 | None:intergenic |
| ATCCATCATTTGGAACAAGA+TGG | 0.540246 | 7.4:-44378867 | None:intergenic |
| AACTACCACAGCTCCTGGTA+TGG | 0.541534 | 7.4:-44378741 | None:intergenic |
| TCCCCAACTACCACAGCTCC+TGG | 0.541696 | 7.4:-44378746 | None:intergenic |
| ACCAGGAGCTGTGGTAGTTG+GGG | 0.553461 | 7.4:+44378745 | MS.gene78230:CDS |
| CACGGTGCGAGGAAGATGGC+TGG | 0.561637 | 7.4:+44377930 | None:intergenic |
| AGGCTGGGAGGTTGTTGAAG+AGG | 0.565561 | 7.4:+44378514 | MS.gene78230:CDS |
| CATTTAGACCAACATGATGA+AGG | 0.566826 | 7.4:+44378362 | MS.gene78230:CDS |
| GAGCTCGTTCTTCAAATGGA+TGG | 0.567465 | 7.4:+44378918 | MS.gene78230:CDS |
| AGTAGGAGAACAGCATTATG+TGG | 0.571923 | 7.4:-44378041 | None:intergenic |
| AGGGAGGGGAGCAATGGCAA+TGG | 0.578428 | 7.4:+44378818 | MS.gene78230:CDS |
| TCACCCTGTCTCGATCCTTG+TGG | 0.586932 | 7.4:-44378320 | None:intergenic |
| GTCTGCCATACCAGGAGCTG+TGG | 0.587043 | 7.4:+44378736 | MS.gene78230:CDS |
| TTGCATTGTCCTCTATGTAG+GGG | 0.587725 | 7.4:+44378482 | MS.gene78230:CDS |
| ATAAGAAGAGAAGTTGCTCA+AGG | 0.588030 | 7.4:+44378555 | MS.gene78230:CDS |
| GGAGAACAGCATTATGTGGA+TGG | 0.588463 | 7.4:-44378037 | None:intergenic |
| TACGTTCTCGAAAATGGAGA+TGG | 0.597289 | 7.4:+44378770 | MS.gene78230:CDS |
| AATACTGTGCCCCTACATAG+AGG | 0.600766 | 7.4:-44378491 | None:intergenic |
| GAGATTATCTGGAATTGCGT+AGG | 0.608619 | 7.4:+44378597 | MS.gene78230:CDS |
| ATGGCAATGGTAATGTACCT+TGG | 0.614535 | 7.4:+44378831 | MS.gene78230:CDS |
| AGTTTCATGTCCTATCTGCA+TGG | 0.615030 | 7.4:+44378013 | MS.gene78230:CDS |
| TAAGAAGAGAAGTTGCTCAA+GGG | 0.617758 | 7.4:+44378556 | MS.gene78230:CDS |
| GTTCTTCAAATGGATGGTCA+AGG | 0.631888 | 7.4:+44378924 | MS.gene78230:CDS |
| TAGGGGCACAGTATTAGGCT+GGG | 0.632550 | 7.4:+44378499 | MS.gene78230:CDS |
| AAAATGGAGATGGTATTGGT+AGG | 0.633136 | 7.4:+44378780 | MS.gene78230:CDS |
| GGACAGGGCTGTTCTTGAGG+AGG | 0.634510 | 7.4:+44378418 | MS.gene78230:CDS |
| AAAATTGAGAGACAACTCTA+CGG | 0.637192 | 7.4:+44378145 | MS.gene78230:CDS |
| GCCGTCGTTTGAATAGGACT+AGG | 0.638435 | 7.4:+44379080 | MS.gene78230:CDS |
| AAGATGTGTCTCATGTCCCA+AGG | 0.639920 | 7.4:+44379053 | MS.gene78230:CDS |
| TCTTGTCGGATCAACATCAG+AGG | 0.652568 | 7.4:-44378651 | None:intergenic |
| CATCATTTGGAACAAGATGG+TGG | 0.659005 | 7.4:-44378864 | None:intergenic |
| TTGTCTGTTGGAATTCCACA+AGG | 0.662938 | 7.4:+44378305 | MS.gene78230:CDS |
| ATTCCACAAGGATCGAGACA+GGG | 0.664648 | 7.4:+44378317 | MS.gene78230:CDS |
| CTTGTCGGATCAACATCAGA+GGG | 0.668547 | 7.4:-44378650 | None:intergenic |
| CACCCCAAAGATAGCGACGA+CGG | 0.669001 | 7.4:-44378964 | None:intergenic |
| ATCCGACAAGAGAACAAGCG+TGG | 0.676885 | 7.4:+44378663 | MS.gene78230:CDS |
| ACCTAGTCCTATTCAAACGA+CGG | 0.678304 | 7.4:-44379081 | None:intergenic |
| AGATGTAGATAATTCATCCG+AGG | 0.680649 | 7.4:+44378445 | MS.gene78230:CDS |
| ATGTGTCTCATGTCCCAAGG+AGG | 0.715779 | 7.4:+44379056 | MS.gene78230:CDS |
| GGGCACAGTATTAGGCTGGG+AGG | 0.723334 | 7.4:+44378502 | MS.gene78230:CDS |
| ATGGTGGTAGTGGTTAACCA+AGG | 0.736997 | 7.4:-44378848 | None:intergenic |
| GGTATTGGTAGGTTACCAGG+TGG | 0.762448 | 7.4:+44378791 | MS.gene78230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAGAACTTTGTAAATT+TGG | - | chr7.4:44378176-44378195 | None:intergenic | 15.0% |
| !! | TTAAAGAACTTTGTAAATTT+GGG | - | chr7.4:44378175-44378194 | None:intergenic | 15.0% |
| !!! | ATAGAGTATTAATTTCATTT+TGG | - | chr7.4:44378286-44378305 | None:intergenic | 15.0% |
| !! | GTTAATATCAAAACTATTAC+CGG | - | chr7.4:44378216-44378235 | None:intergenic | 20.0% |
| !!! | TGTCTCTCAATTTTTTAAAT+CGG | - | chr7.4:44378139-44378158 | None:intergenic | 20.0% |
| ! | ACATTTGTGATACAAGTTAT+AGG | + | chr7.4:44378096-44378115 | MS.gene78230:CDS | 25.0% |
| ! | ATAACACCATTGAAATTGTT+AGG | + | chr7.4:44378888-44378907 | MS.gene78230:CDS | 25.0% |
| ! | ATTAATACTCTATTGTCTGT+TGG | + | chr7.4:44378293-44378312 | MS.gene78230:CDS | 25.0% |
| ! | TAACACCATTGAAATTGTTA+GGG | + | chr7.4:44378889-44378908 | MS.gene78230:CDS | 25.0% |
| ! | TCTACGAATATTTAATGAAC+TGG | + | chr7.4:44379027-44379046 | MS.gene78230:CDS | 25.0% |
| AAAATTGAGAGACAACTCTA+CGG | + | chr7.4:44378145-44378164 | MS.gene78230:CDS | 30.0% | |
| ATAAACACTAACAACTCTTC+CGG | + | chr7.4:44378194-44378213 | MS.gene78230:CDS | 30.0% | |
| TAAATGTCTACTTGGATCTT+GGG | - | chr7.4:44378348-44378367 | None:intergenic | 30.0% | |
| TTATAGGCATTCAAATTGTC+TGG | + | chr7.4:44378112-44378131 | MS.gene78230:CDS | 30.0% | |
| AGATGTAGATAATTCATCCG+AGG | + | chr7.4:44378445-44378464 | MS.gene78230:CDS | 35.0% | |
| ATAAGAAGAGAAGTTGCTCA+AGG | + | chr7.4:44378555-44378574 | MS.gene78230:CDS | 35.0% | |
| CAATATCACCATATTCTCTC+TGG | - | chr7.4:44378703-44378722 | None:intergenic | 35.0% | |
| CATTTAGACCAACATGATGA+AGG | + | chr7.4:44378362-44378381 | MS.gene78230:CDS | 35.0% | |
| CTAAAATGCCTTCATCATGT+TGG | - | chr7.4:44378373-44378392 | None:intergenic | 35.0% | |
| CTAAATGTCTACTTGGATCT+TGG | - | chr7.4:44378349-44378368 | None:intergenic | 35.0% | |
| TAAGAAGAGAAGTTGCTCAA+GGG | + | chr7.4:44378556-44378575 | MS.gene78230:CDS | 35.0% | |
| TGGTTCCCTAACAATTTCAA+TGG | - | chr7.4:44378897-44378916 | None:intergenic | 35.0% | |
| TTTGCATTGTCCTCTATGTA+GGG | + | chr7.4:44378481-44378500 | MS.gene78230:CDS | 35.0% | |
| ! | ATCCATCATTTGGAACAAGA+TGG | - | chr7.4:44378870-44378889 | None:intergenic | 35.0% |
| ! | TGTTGGTCTAAATGTCTACT+TGG | - | chr7.4:44378356-44378375 | None:intergenic | 35.0% |
| !! | AAAATGGAGATGGTATTGGT+AGG | + | chr7.4:44378780-44378799 | MS.gene78230:CDS | 35.0% |
| !! | CAATGGTGTTATCCATCATT+TGG | - | chr7.4:44378880-44378899 | None:intergenic | 35.0% |
| ACCTAGTCCTATTCAAACGA+CGG | - | chr7.4:44379084-44379103 | None:intergenic | 40.0% | |
| ACTTTGCAGCTCTCATGATA+AGG | + | chr7.4:44378061-44378080 | MS.gene78230:CDS | 40.0% | |
| AGTAGGAGAACAGCATTATG+TGG | - | chr7.4:44378044-44378063 | None:intergenic | 40.0% | |
| AGTTTCATGTCCTATCTGCA+TGG | + | chr7.4:44378013-44378032 | MS.gene78230:CDS | 40.0% | |
| CACCATCTTGTTCCAAATGA+TGG | + | chr7.4:44378865-44378884 | MS.gene78230:CDS | 40.0% | |
| CTCGAAAATGGAGATGGTAT+TGG | + | chr7.4:44378776-44378795 | MS.gene78230:CDS | 40.0% | |
| CTTTGCAGCTCTCATGATAA+GGG | + | chr7.4:44378062-44378081 | MS.gene78230:CDS | 40.0% | |
| GTTCTTCAAATGGATGGTCA+AGG | + | chr7.4:44378924-44378943 | MS.gene78230:CDS | 40.0% | |
| GTTTGCATTGTCCTCTATGT+AGG | + | chr7.4:44378480-44378499 | MS.gene78230:CDS | 40.0% | |
| TACGTTCTCGAAAATGGAGA+TGG | + | chr7.4:44378770-44378789 | MS.gene78230:CDS | 40.0% | |
| TATCATGAGAGCTGCAAAGT+AGG | - | chr7.4:44378061-44378080 | None:intergenic | 40.0% | |
| TTGCATTGTCCTCTATGTAG+GGG | + | chr7.4:44378482-44378501 | MS.gene78230:CDS | 40.0% | |
| TTGTCTGTTGGAATTCCACA+AGG | + | chr7.4:44378305-44378324 | MS.gene78230:CDS | 40.0% | |
| ! | ATGGCAATGGTAATGTACCT+TGG | + | chr7.4:44378831-44378850 | MS.gene78230:CDS | 40.0% |
| ! | CATCATTTGGAACAAGATGG+TGG | - | chr7.4:44378867-44378886 | None:intergenic | 40.0% |
| ! | CTCATTTGCTGGAGATTATC+TGG | + | chr7.4:44378586-44378605 | MS.gene78230:CDS | 40.0% |
| ! | GAGATTATCTGGAATTGCGT+AGG | + | chr7.4:44378597-44378616 | MS.gene78230:CDS | 40.0% |
| !! | CTTTGGGGTGAGAATTTGTT+GGG | + | chr7.4:44378977-44378996 | MS.gene78230:CDS | 40.0% |
| !! | TCTTTGGGGTGAGAATTTGT+TGG | + | chr7.4:44378976-44378995 | MS.gene78230:CDS | 40.0% |
| AAGATGTGTCTCATGTCCCA+AGG | + | chr7.4:44379053-44379072 | MS.gene78230:CDS | 45.0% | |
| AATACTGTGCCCCTACATAG+AGG | - | chr7.4:44378494-44378513 | None:intergenic | 45.0% | |
| AATTCCACAAGGATCGAGAC+AGG | + | chr7.4:44378316-44378335 | MS.gene78230:CDS | 45.0% | |
| AGGGATTCATGCTCATTTGC+TGG | + | chr7.4:44378575-44378594 | MS.gene78230:CDS | 45.0% | |
| ATTCCACAAGGATCGAGACA+GGG | + | chr7.4:44378317-44378336 | MS.gene78230:CDS | 45.0% | |
| CAAACTCGACTTTGAGTCCT+CGG | - | chr7.4:44378465-44378484 | None:intergenic | 45.0% | |
| CCAAGAGCTCGTTCTTCAAA+TGG | + | chr7.4:44378914-44378933 | MS.gene78230:CDS | 45.0% | |
| CCATTTGAAGAACGAGCTCT+TGG | - | chr7.4:44378917-44378936 | None:intergenic | 45.0% | |
| CTTGTCGGATCAACATCAGA+GGG | - | chr7.4:44378653-44378672 | None:intergenic | 45.0% | |
| GAGCTCGTTCTTCAAATGGA+TGG | + | chr7.4:44378918-44378937 | MS.gene78230:CDS | 45.0% | |
| GCATGCTCTTCACAGAGAAT+TGG | + | chr7.4:44377986-44378005 | MS.gene78230:CDS | 45.0% | |
| GGAGAACAGCATTATGTGGA+TGG | - | chr7.4:44378040-44378059 | None:intergenic | 45.0% | |
| GGGGATTACGTTCTCGAAAA+TGG | + | chr7.4:44378764-44378783 | MS.gene78230:CDS | 45.0% | |
| TCTTGTCGGATCAACATCAG+AGG | - | chr7.4:44378654-44378673 | None:intergenic | 45.0% | |
| TTTGAGCGCCAGAGAGAATA+TGG | + | chr7.4:44378692-44378711 | MS.gene78230:CDS | 45.0% | |
| ! | ATTCTGAGAACTTGCAGGAC+AGG | + | chr7.4:44378402-44378421 | MS.gene78230:CDS | 45.0% |
| ! | CTATGTAGGGGCACAGTATT+AGG | + | chr7.4:44378494-44378513 | MS.gene78230:CDS | 45.0% |
| ! | TTCTGAGAACTTGCAGGACA+GGG | + | chr7.4:44378403-44378422 | MS.gene78230:CDS | 45.0% |
| ! | TTGGAACAAGATGGTGGTAG+TGG | - | chr7.4:44378861-44378880 | None:intergenic | 45.0% |
| !! | ATGGTGGTAGTGGTTAACCA+AGG | - | chr7.4:44378851-44378870 | None:intergenic | 45.0% |
| !! | GATGGTATTGGTAGGTTACC+AGG | + | chr7.4:44378788-44378807 | MS.gene78230:CDS | 45.0% |
| !! | TGCTGATTCTGAGAACTTGC+AGG | + | chr7.4:44378397-44378416 | MS.gene78230:CDS | 45.0% |
| AACTACCACAGCTCCTGGTA+TGG | - | chr7.4:44378744-44378763 | None:intergenic | 50.0% | |
| ACATCAGAGGGACGAGAAGT+AGG | - | chr7.4:44378641-44378660 | None:intergenic | 50.0% | |
| ATACCAGGAGCTGTGGTAGT+TGG | + | chr7.4:44378743-44378762 | MS.gene78230:CDS | 50.0% | |
| ATCCGACAAGAGAACAAGCG+TGG | + | chr7.4:44378663-44378682 | MS.gene78230:CDS | 50.0% | |
| ATGTGTCTCATGTCCCAAGG+AGG | + | chr7.4:44379056-44379075 | MS.gene78230:CDS | 50.0% | |
| ATTGGTAGGTTACCAGGTGG+TGG | + | chr7.4:44378794-44378813 | MS.gene78230:CDS | 50.0% | |
| GCCGTCGTTTGAATAGGACT+AGG | + | chr7.4:44379080-44379099 | MS.gene78230:CDS | 50.0% | |
| GCTATTCAGTCTGCCATACC+AGG | + | chr7.4:44378728-44378747 | MS.gene78230:CDS | 50.0% | |
| TACCAGGAGCTGTGGTAGTT+GGG | + | chr7.4:44378744-44378763 | MS.gene78230:CDS | 50.0% | |
| TGACCGTCGTCGCTATCTTT+GGG | + | chr7.4:44378961-44378980 | MS.gene78230:CDS | 50.0% | |
| TGCCACGCTTGTTCTCTTGT+CGG | - | chr7.4:44378668-44378687 | None:intergenic | 50.0% | |
| TGGAATTGCGTAGGCATGCT+AGG | + | chr7.4:44378606-44378625 | MS.gene78230:CDS | 50.0% | |
| TGTGGATGGTCCATGCAGAT+AGG | - | chr7.4:44378026-44378045 | None:intergenic | 50.0% | |
| ! | TAGGGGCACAGTATTAGGCT+GGG | + | chr7.4:44378499-44378518 | MS.gene78230:CDS | 50.0% |
| ! | TAGGTTACCAGGTGGTGGTA+GGG | + | chr7.4:44378799-44378818 | MS.gene78230:CDS | 50.0% |
| !! | GGTATTGGTAGGTTACCAGG+TGG | + | chr7.4:44378791-44378810 | MS.gene78230:CDS | 50.0% |
| ACCAGGAGCTGTGGTAGTTG+GGG | + | chr7.4:44378745-44378764 | MS.gene78230:CDS | 55.0% | |
| AGGCTGGGAGGTTGTTGAAG+AGG | + | chr7.4:44378514-44378533 | MS.gene78230:CDS | 55.0% | |
| CACCCCAAAGATAGCGACGA+CGG | - | chr7.4:44378967-44378986 | None:intergenic | 55.0% | |
| CTGACCGTCGTCGCTATCTT+TGG | + | chr7.4:44378960-44378979 | MS.gene78230:CDS | 55.0% | |
| GACCGTCGTCGCTATCTTTG+GGG | + | chr7.4:44378962-44378981 | MS.gene78230:CDS | 55.0% | |
| TCACCCTGTCTCGATCCTTG+TGG | - | chr7.4:44378323-44378342 | None:intergenic | 55.0% | |
| ! | GTAGGGGCACAGTATTAGGC+TGG | + | chr7.4:44378498-44378517 | MS.gene78230:CDS | 55.0% |
| ! | GTAGGTTACCAGGTGGTGGT+AGG | + | chr7.4:44378798-44378817 | MS.gene78230:CDS | 55.0% |
| ! | TTACCAGGTGGTGGTAGGGA+GGG | + | chr7.4:44378803-44378822 | MS.gene78230:CDS | 55.0% |
| AGGGAGGGGAGCAATGGCAA+TGG | + | chr7.4:44378818-44378837 | MS.gene78230:CDS | 60.0% | |
| GCAGGACAGGGCTGTTCTTG+AGG | + | chr7.4:44378415-44378434 | MS.gene78230:CDS | 60.0% | |
| GGACAGGGCTGTTCTTGAGG+AGG | + | chr7.4:44378418-44378437 | MS.gene78230:CDS | 60.0% | |
| GGGCACAGTATTAGGCTGGG+AGG | + | chr7.4:44378502-44378521 | MS.gene78230:CDS | 60.0% | |
| GTCTGCCATACCAGGAGCTG+TGG | + | chr7.4:44378736-44378755 | MS.gene78230:CDS | 60.0% | |
| TCAAACGACGGCGCCTCCTT+GGG | - | chr7.4:44379072-44379091 | None:intergenic | 60.0% | |
| TCCCCAACTACCACAGCTCC+TGG | - | chr7.4:44378749-44378768 | None:intergenic | 60.0% | |
| TTCAAACGACGGCGCCTCCT+TGG | - | chr7.4:44379073-44379092 | None:intergenic | 60.0% | |
| ! | GTTACCAGGTGGTGGTAGGG+AGG | + | chr7.4:44378802-44378821 | MS.gene78230:CDS | 60.0% |
| ! | TACCAGGTGGTGGTAGGGAG+GGG | + | chr7.4:44378804-44378823 | MS.gene78230:CDS | 60.0% |
| !! | GGAGGCGCCGTCGTTTGAAT+AGG | + | chr7.4:44379074-44379093 | MS.gene78230:CDS | 60.0% |
| GGTGGTAGGGAGGGGAGCAA+TGG | + | chr7.4:44378812-44378831 | MS.gene78230:CDS | 65.0% | |
| CTCCCCTCCCTACCACCACC+TGG | - | chr7.4:44378809-44378828 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 44377945 | 44379123 | 44377945 | ID=MS.gene78230 |
| chr7.4 | mRNA | 44377945 | 44379123 | 44377945 | ID=MS.gene78230.t1;Parent=MS.gene78230 |
| chr7.4 | exon | 44377945 | 44379123 | 44377945 | ID=MS.gene78230.t1.exon1;Parent=MS.gene78230.t1 |
| chr7.4 | CDS | 44377945 | 44379123 | 44377945 | ID=cds.MS.gene78230.t1;Parent=MS.gene78230.t1 |
| Gene Sequence |
| Protein sequence |
