Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069412.t1 | XP_024626193.1 | 99.5 | 568 | 3 | 0 | 1 | 568 | 110 | 677 | 0.00E+00 | 1128.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069412.t1 | Q9FNR3 | 42.7 | 555 | 300 | 3 | 2 | 556 | 89 | 625 | 1.6e-124 | 448.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069412.t1 | A0A072TXQ3 | 99.5 | 568 | 3 | 0 | 1 | 568 | 110 | 677 | 0.0e+00 | 1128.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene069412 | 0.823273 | 1.51E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene069412 | 0.809222 | 2.10E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene069412 | 0.816821 | 4.54E-52 | -1.69E-46 |
| MS.gene049368 | MS.gene069412 | 0.807142 | 5.84E-50 | -1.69E-46 |
| MS.gene049452 | MS.gene069412 | 0.821951 | 3.07E-53 | -1.69E-46 |
| MS.gene049499 | MS.gene069412 | 0.815103 | 1.10E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene069412 | 0.85265 | 4.02E-61 | -1.69E-46 |
| MS.gene050654 | MS.gene069412 | 0.84623 | 2.47E-59 | -1.69E-46 |
| MS.gene050737 | MS.gene069412 | 0.807891 | 4.05E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene069412 | 0.810961 | 8.88E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene069412 | 0.812328 | 4.48E-51 | -1.69E-46 |
| MS.gene050962 | MS.gene069412 | 0.800761 | 1.24E-48 | -1.69E-46 |
| MS.gene051198 | MS.gene069412 | 0.8335 | 5.15E-56 | -1.69E-46 |
| MS.gene051279 | MS.gene069412 | 0.804962 | 1.68E-49 | -1.69E-46 |
| MS.gene051332 | MS.gene069412 | 0.816012 | 6.89E-52 | -1.69E-46 |
| MS.gene051541 | MS.gene069412 | 0.820697 | 5.98E-53 | -1.69E-46 |
| MS.gene051800 | MS.gene069412 | 0.834652 | 2.65E-56 | -1.69E-46 |
| MS.gene052016 | MS.gene069412 | 0.806036 | 1.00E-49 | -1.69E-46 |
| MS.gene052037 | MS.gene069412 | 0.815054 | 1.12E-51 | -1.69E-46 |
| MS.gene052118 | MS.gene069412 | 0.832978 | 6.94E-56 | -1.69E-46 |
| MS.gene052463 | MS.gene069412 | 0.828346 | 9.46E-55 | -1.69E-46 |
| MS.gene052493 | MS.gene069412 | 0.803588 | 3.25E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene069412 | 0.817589 | 3.05E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene069412 | 0.815751 | 7.87E-52 | -1.69E-46 |
| MS.gene052674 | MS.gene069412 | 0.818192 | 2.23E-52 | -1.69E-46 |
| MS.gene052675 | MS.gene069412 | 0.816084 | 6.64E-52 | -1.69E-46 |
| MS.gene052677 | MS.gene069412 | 0.82508 | 5.70E-54 | -1.69E-46 |
| MS.gene05350 | MS.gene069412 | 0.838344 | 3.04E-57 | -1.69E-46 |
| MS.gene05423 | MS.gene069412 | 0.822976 | 1.78E-53 | -1.69E-46 |
| MS.gene054479 | MS.gene069412 | 0.850322 | 1.83E-60 | -1.69E-46 |
| MS.gene054489 | MS.gene069412 | 0.812854 | 3.44E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene069412 | 0.820463 | 6.77E-53 | -1.69E-46 |
| MS.gene054641 | MS.gene069412 | 0.842682 | 2.23E-58 | -1.69E-46 |
| MS.gene054651 | MS.gene069412 | 0.815467 | 9.11E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene069412 | 0.810559 | 1.09E-50 | -1.69E-46 |
| MS.gene054893 | MS.gene069412 | 0.810822 | 9.52E-51 | -1.69E-46 |
| MS.gene055327 | MS.gene069412 | 0.827936 | 1.19E-54 | -1.69E-46 |
| MS.gene055864 | MS.gene069412 | 0.835621 | 1.51E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene069412 | 0.82067 | 6.07E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene069412 | 0.845301 | 4.42E-59 | -1.69E-46 |
| MS.gene056480 | MS.gene069412 | 0.820429 | 6.89E-53 | -1.69E-46 |
| MS.gene056776 | MS.gene069412 | 0.812078 | 5.08E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene069412 | 0.806374 | 8.49E-50 | -1.69E-46 |
| MS.gene056873 | MS.gene069412 | 0.800319 | 1.52E-48 | -1.69E-46 |
| MS.gene05690 | MS.gene069412 | 0.81107 | 8.42E-51 | -1.69E-46 |
| MS.gene056973 | MS.gene069412 | 0.804622 | 1.98E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene069412 | 0.822691 | 2.07E-53 | -1.69E-46 |
| MS.gene057598 | MS.gene069412 | 0.811449 | 6.96E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene069412 | 0.801945 | 7.08E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene069412 | 0.840543 | 8.16E-58 | -1.69E-46 |
| MS.gene058159 | MS.gene069412 | 0.834363 | 3.13E-56 | -1.69E-46 |
| MS.gene058223 | MS.gene069412 | -0.808623 | 2.83E-50 | -1.69E-46 |
| MS.gene058279 | MS.gene069412 | 0.807181 | 5.73E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene069412 | 0.84631 | 2.35E-59 | -1.69E-46 |
| MS.gene058979 | MS.gene069412 | 0.810559 | 1.09E-50 | -1.69E-46 |
| MS.gene05897 | MS.gene069412 | 0.800908 | 1.16E-48 | -1.69E-46 |
| MS.gene059224 | MS.gene069412 | 0.812004 | 5.27E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene069412 | 0.813752 | 2.18E-51 | -1.69E-46 |
| MS.gene059439 | MS.gene069412 | 0.814301 | 1.65E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene069412 | 0.815515 | 8.89E-52 | -1.69E-46 |
| MS.gene060259 | MS.gene069412 | 0.812886 | 3.38E-51 | -1.69E-46 |
| MS.gene060373 | MS.gene069412 | 0.810166 | 1.32E-50 | -1.69E-46 |
| MS.gene060435 | MS.gene069412 | 0.849489 | 3.13E-60 | -1.69E-46 |
| MS.gene060527 | MS.gene069412 | 0.823558 | 1.30E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene069412 | 0.8695 | 2.96E-66 | -1.69E-46 |
| MS.gene060777 | MS.gene069412 | 0.831922 | 1.27E-55 | -1.69E-46 |
| MS.gene060851 | MS.gene069412 | 0.803735 | 3.03E-49 | -1.69E-46 |
| MS.gene060852 | MS.gene069412 | 0.800759 | 1.24E-48 | -1.69E-46 |
| MS.gene060932 | MS.gene069412 | 0.864393 | 1.26E-64 | -1.69E-46 |
| MS.gene060935 | MS.gene069412 | 0.80358 | 3.26E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene069412 | 0.818733 | 1.68E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene069412 | 0.815384 | 9.50E-52 | -1.69E-46 |
| MS.gene06121 | MS.gene069412 | 0.845841 | 3.16E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene83829 | MS.gene069412 | PPI |
| MS.gene79408 | MS.gene069412 | PPI |
| MS.gene79406 | MS.gene069412 | PPI |
| MS.gene93502 | MS.gene069412 | PPI |
| MS.gene83828 | MS.gene069412 | PPI |
| MS.gene79407 | MS.gene069412 | PPI |
| MS.gene28226 | MS.gene069412 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069412.t1 | MTR_7g013770 | 99.472 | 568 | 3 | 0 | 1 | 568 | 110 | 677 | 0.0 | 1175 |
| MS.gene069412.t1 | MTR_3g025900 | 44.681 | 564 | 295 | 5 | 6 | 568 | 72 | 619 | 8.47e-163 | 478 |
| MS.gene069412.t1 | MTR_4g103540 | 44.587 | 545 | 269 | 11 | 41 | 568 | 162 | 690 | 6.99e-139 | 419 |
| MS.gene069412.t1 | MTR_8g021330 | 41.002 | 539 | 285 | 10 | 47 | 557 | 72 | 605 | 8.96e-123 | 375 |
| MS.gene069412.t1 | MTR_5g073450 | 34.705 | 559 | 338 | 9 | 9 | 558 | 94 | 634 | 2.11e-105 | 331 |
| MS.gene069412.t1 | MTR_3g031130 | 35.768 | 534 | 297 | 7 | 42 | 558 | 116 | 620 | 2.47e-97 | 309 |
| MS.gene069412.t1 | MTR_1g090620 | 31.725 | 539 | 313 | 8 | 45 | 557 | 132 | 641 | 7.20e-90 | 290 |
| MS.gene069412.t1 | MTR_1g057560 | 32.203 | 531 | 312 | 7 | 41 | 556 | 127 | 624 | 1.11e-89 | 289 |
| MS.gene069412.t1 | MTR_2g096230 | 32.369 | 553 | 333 | 10 | 8 | 557 | 67 | 581 | 1.04e-86 | 280 |
| MS.gene069412.t1 | MTR_7g026630 | 33.563 | 435 | 273 | 7 | 131 | 557 | 224 | 650 | 6.74e-86 | 280 |
| MS.gene069412.t1 | MTR_5g073460 | 35.669 | 471 | 284 | 8 | 97 | 560 | 237 | 695 | 6.34e-84 | 276 |
| MS.gene069412.t1 | MTR_6g033310 | 30.726 | 537 | 323 | 8 | 41 | 558 | 220 | 726 | 1.02e-83 | 276 |
| MS.gene069412.t1 | MTR_4g062330 | 29.908 | 545 | 362 | 9 | 9 | 551 | 72 | 598 | 1.79e-76 | 254 |
| MS.gene069412.t1 | MTR_1g067480 | 32.054 | 521 | 327 | 10 | 42 | 555 | 100 | 600 | 6.53e-76 | 252 |
| MS.gene069412.t1 | MTR_1g117090 | 29.912 | 565 | 349 | 12 | 41 | 568 | 123 | 677 | 1.39e-74 | 250 |
| MS.gene069412.t1 | MTR_1g067460 | 31.549 | 523 | 328 | 11 | 42 | 555 | 98 | 599 | 1.02e-68 | 233 |
| MS.gene069412.t1 | MTR_5g073620 | 30.481 | 374 | 214 | 5 | 106 | 463 | 266 | 609 | 2.49e-49 | 184 |
| MS.gene069412.t1 | MTR_5g073620 | 33.714 | 175 | 112 | 2 | 389 | 560 | 898 | 1071 | 1.75e-20 | 96.3 |
| MS.gene069412.t1 | MTR_5g074130 | 27.313 | 454 | 298 | 9 | 116 | 561 | 250 | 679 | 7.83e-43 | 164 |
| MS.gene069412.t1 | MTR_5g073480 | 26.398 | 447 | 241 | 11 | 106 | 546 | 256 | 620 | 5.73e-38 | 148 |
| MS.gene069412.t1 | MTR_4g008260 | 26.519 | 543 | 311 | 15 | 48 | 567 | 174 | 651 | 7.59e-36 | 142 |
| MS.gene069412.t1 | MTR_5g073920 | 26.027 | 438 | 280 | 9 | 131 | 559 | 259 | 661 | 8.58e-36 | 142 |
| MS.gene069412.t1 | MTR_3g464010 | 26.752 | 471 | 299 | 14 | 100 | 555 | 227 | 666 | 3.04e-33 | 135 |
| MS.gene069412.t1 | MTR_1g009620 | 24.837 | 459 | 306 | 9 | 123 | 563 | 228 | 665 | 9.90e-30 | 124 |
| MS.gene069412.t1 | MTR_1g017910 | 25.776 | 419 | 285 | 9 | 125 | 528 | 248 | 655 | 1.22e-29 | 124 |
| MS.gene069412.t1 | MTR_5g073900 | 25.945 | 397 | 231 | 11 | 138 | 529 | 4 | 342 | 2.81e-28 | 116 |
| MS.gene069412.t1 | MTR_5g073770 | 32.075 | 212 | 132 | 2 | 92 | 291 | 165 | 376 | 6.01e-26 | 110 |
| MS.gene069412.t1 | MTR_5g093530 | 25.876 | 371 | 223 | 8 | 191 | 555 | 246 | 570 | 1.10e-25 | 111 |
| MS.gene069412.t1 | MTR_5g073780 | 33.143 | 175 | 113 | 2 | 389 | 560 | 53 | 226 | 4.72e-21 | 92.4 |
| MS.gene069412.t1 | MTR_5g073490 | 32.335 | 167 | 92 | 3 | 395 | 556 | 3 | 153 | 1.25e-18 | 83.6 |
| MS.gene069412.t1 | MTR_0229s0040 | 28.141 | 199 | 127 | 4 | 379 | 563 | 24 | 220 | 1.24e-16 | 80.1 |
| MS.gene069412.t1 | MTR_5g073960 | 24.434 | 221 | 146 | 6 | 78 | 294 | 213 | 416 | 9.22e-14 | 73.9 |
| MS.gene069412.t1 | MTR_5g073820 | 23.864 | 264 | 138 | 5 | 87 | 317 | 152 | 385 | 2.43e-12 | 69.7 |
| MS.gene069412.t1 | MTR_2g041650 | 23.167 | 341 | 220 | 10 | 5 | 341 | 139 | 441 | 9.35e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069412.t1 | AT3G29400 | 50.775 | 581 | 266 | 8 | 1 | 568 | 85 | 658 | 0.0 | 548 |
| MS.gene069412.t1 | AT5G61010 | 42.883 | 555 | 299 | 4 | 2 | 556 | 89 | 625 | 1.03e-154 | 457 |
| MS.gene069412.t1 | AT5G61010 | 42.883 | 555 | 299 | 4 | 2 | 556 | 89 | 625 | 1.03e-154 | 457 |
| MS.gene069412.t1 | AT5G50380 | 42.256 | 594 | 288 | 12 | 3 | 568 | 116 | 682 | 2.32e-150 | 448 |
| MS.gene069412.t1 | AT3G14090 | 38.333 | 540 | 295 | 10 | 44 | 557 | 86 | 613 | 2.35e-119 | 366 |
| MS.gene069412.t1 | AT1G72470 | 36.717 | 591 | 315 | 13 | 7 | 557 | 50 | 621 | 2.11e-114 | 353 |
| MS.gene069412.t1 | AT1G54090 | 35.993 | 589 | 317 | 12 | 8 | 557 | 44 | 611 | 2.51e-111 | 345 |
| MS.gene069412.t1 | AT5G58430 | 32.456 | 570 | 340 | 10 | 2 | 558 | 82 | 619 | 2.95e-95 | 304 |
| MS.gene069412.t1 | AT5G03540 | 32.784 | 546 | 312 | 8 | 42 | 567 | 13 | 523 | 5.05e-92 | 292 |
| MS.gene069412.t1 | AT5G03540 | 32.419 | 583 | 336 | 10 | 6 | 567 | 93 | 638 | 1.36e-91 | 295 |
| MS.gene069412.t1 | AT5G03540 | 31.940 | 598 | 345 | 10 | 6 | 567 | 93 | 664 | 1.38e-89 | 290 |
| MS.gene069412.t1 | AT5G52340 | 30.783 | 562 | 348 | 8 | 6 | 557 | 93 | 623 | 5.09e-87 | 282 |
| MS.gene069412.t1 | AT1G07000 | 31.414 | 573 | 321 | 13 | 2 | 558 | 81 | 597 | 1.53e-86 | 280 |
| MS.gene069412.t1 | AT5G59730 | 32.737 | 559 | 350 | 11 | 9 | 559 | 60 | 600 | 1.35e-84 | 276 |
| MS.gene069412.t1 | AT5G59730 | 32.737 | 559 | 350 | 11 | 9 | 559 | 60 | 600 | 1.40e-84 | 276 |
| MS.gene069412.t1 | AT2G28640 | 30.577 | 520 | 328 | 6 | 42 | 560 | 94 | 581 | 4.64e-83 | 271 |
| MS.gene069412.t1 | AT1G07725 | 32.563 | 519 | 324 | 9 | 42 | 557 | 96 | 591 | 2.19e-82 | 270 |
| MS.gene069412.t1 | AT5G13150 | 31.690 | 568 | 356 | 14 | 5 | 558 | 96 | 645 | 4.07e-82 | 270 |
| MS.gene069412.t1 | AT2G39380 | 29.211 | 558 | 365 | 7 | 9 | 558 | 76 | 611 | 2.12e-78 | 259 |
| MS.gene069412.t1 | AT5G13990 | 30.847 | 590 | 329 | 15 | 2 | 558 | 139 | 682 | 6.56e-77 | 257 |
| MS.gene069412.t1 | AT3G09520 | 30.443 | 542 | 331 | 10 | 32 | 555 | 91 | 604 | 3.43e-71 | 240 |
| MS.gene069412.t1 | AT5G52350 | 30.684 | 453 | 284 | 4 | 112 | 557 | 148 | 577 | 3.68e-70 | 236 |
| MS.gene069412.t1 | AT3G09530 | 28.014 | 564 | 368 | 9 | 11 | 557 | 60 | 602 | 3.37e-66 | 227 |
| MS.gene069412.t1 | AT3G55150 | 27.907 | 559 | 373 | 7 | 8 | 558 | 75 | 611 | 9.55e-66 | 226 |
| MS.gene069412.t1 | AT2G28650 | 27.961 | 515 | 314 | 8 | 42 | 555 | 96 | 554 | 2.17e-60 | 210 |
| MS.gene069412.t1 | AT4G31540 | 25.056 | 443 | 303 | 7 | 123 | 555 | 231 | 654 | 1.23e-33 | 136 |
| MS.gene069412.t1 | AT1G51640 | 24.009 | 454 | 300 | 9 | 128 | 559 | 199 | 629 | 3.49e-23 | 104 |
Find 112 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCAAAAGGTTGCCTATTC+TGG | 0.158452 | 7.4:-84390902 | None:intergenic |
| TCAATCGATGATTTGGGATT+TGG | 0.227503 | 7.4:+84390701 | None:intergenic |
| CAAAGATCAAAAGATGGATT+TGG | 0.241414 | 7.4:+84391255 | MS.gene069412:CDS |
| GTTCGCCTTCTCCGAAAATT+TGG | 0.255340 | 7.4:-84391331 | None:intergenic |
| GGGCTTTGAAAATCTTTGTT+AGG | 0.261655 | 7.4:+84391276 | MS.gene069412:CDS |
| AGGAAGATCAATCGATGATT+TGG | 0.283223 | 7.4:+84390694 | None:intergenic |
| TATTGAAGATGTCTTGAAAA+TGG | 0.283952 | 7.4:+84391214 | MS.gene069412:CDS |
| TGATTTAGAAAATTATCTTT+TGG | 0.292941 | 7.4:+84392342 | MS.gene069412:CDS |
| TACATGGCTGAAAAGGTTAA+AGG | 0.293386 | 7.4:+84391956 | MS.gene069412:CDS |
| TTCCATTCTCAACTTTCTTA+AGG | 0.294818 | 7.4:+84392075 | MS.gene069412:CDS |
| AGTTGTTGCAAAATCCTATT+AGG | 0.296540 | 7.4:+84392386 | MS.gene069412:CDS |
| CAATCGATGATTTGGGATTT+GGG | 0.298646 | 7.4:+84390702 | None:intergenic |
| TTAAAGTGATTCAAGCTTAT+AGG | 0.315348 | 7.4:+84392260 | MS.gene069412:CDS |
| AAGCTTATACCATTGTTAGA+AGG | 0.328404 | 7.4:+84391144 | MS.gene069412:CDS |
| TCGGCTTCGAGGATATTTAC+AGG | 0.329702 | 7.4:+84392173 | MS.gene069412:CDS |
| TGCTATTATCATCTCCTAAT+AGG | 0.331305 | 7.4:-84392400 | None:intergenic |
| AAAGATCAAAAGATGGATTT+GGG | 0.331630 | 7.4:+84391256 | MS.gene069412:CDS |
| ACAAAACAAGCTTGACTAAC+AGG | 0.350658 | 7.4:-84391353 | None:intergenic |
| AGATTTGCGGATTTCTATAT+CGG | 0.356841 | 7.4:+84392237 | MS.gene069412:CDS |
| TTTGGTGAAGCTATGTCTAT+TGG | 0.365289 | 7.4:+84391413 | MS.gene069412:CDS |
| CTCAACTTTCTTAAGGATGA+AGG | 0.371916 | 7.4:+84392082 | MS.gene069412:CDS |
| TGACATCAATGCTTTGTATT+CGG | 0.372086 | 7.4:+84391502 | MS.gene069412:CDS |
| TTCAGCTTCGCGAAGATTTG+CGG | 0.372177 | 7.4:+84392224 | MS.gene069412:CDS |
| AATGAACAAACACTCATCTA+AGG | 0.398840 | 7.4:-84391171 | None:intergenic |
| GGAAGATCAATCGATGATTT+GGG | 0.400737 | 7.4:+84390695 | None:intergenic |
| TTGGCTTCTGTTATCATCTT+CGG | 0.401388 | 7.4:-84391795 | None:intergenic |
| TCTTCGCGAAGCTGAACATC+TGG | 0.409566 | 7.4:-84392217 | None:intergenic |
| GGCTTTGAAAATCTTTGTTA+GGG | 0.412401 | 7.4:+84391277 | MS.gene069412:CDS |
| GTGTTTGTTCATTCTTGAAA+TGG | 0.417456 | 7.4:+84391181 | MS.gene069412:CDS |
| TTCGGACGAGGTTGGTTCCT+CGG | 0.417915 | 7.4:+84391520 | MS.gene069412:CDS |
| CGTGTCAGGTGACGATGAAA+TGG | 0.419107 | 7.4:-84391762 | None:intergenic |
| GAAAATGGAATGGGGTACTT+TGG | 0.421152 | 7.4:+84391229 | MS.gene069412:CDS |
| CCAAGACTGAAGCAAATGAT+AGG | 0.421729 | 7.4:-84391856 | None:intergenic |
| CAAGCTTATAGGACATTTGT+TGG | 0.424622 | 7.4:+84392271 | MS.gene069412:CDS |
| CCTACATTACATGGCTGAAA+AGG | 0.424669 | 7.4:+84391949 | MS.gene069412:CDS |
| ATTCAGTGCTTCGCTGTAAT+CGG | 0.425187 | 7.4:-84391708 | None:intergenic |
| ATCGTCACCTGACACGAGTC+CGG | 0.427795 | 7.4:+84391769 | MS.gene069412:CDS |
| AAATACTCAGACGTTTCTTC+AGG | 0.429562 | 7.4:-84390726 | None:intergenic |
| GAGAATTCGTATCAATTTCT+CGG | 0.430289 | 7.4:-84391447 | None:intergenic |
| TTCGTATCAATTTCTCGGGT+TGG | 0.433899 | 7.4:-84391442 | None:intergenic |
| CCTATCATTTGCTTCAGTCT+TGG | 0.436027 | 7.4:+84391856 | MS.gene069412:CDS |
| AGCGAGGAAGATGTTGTTGA+TGG | 0.439521 | 7.4:+84390948 | MS.gene069412:CDS |
| TGTCATTGATTTAGTTCATC+CGG | 0.441468 | 7.4:+84391052 | MS.gene069412:CDS |
| ATCCTTAAGAAAGTTGAGAA+TGG | 0.446088 | 7.4:-84392077 | None:intergenic |
| CGGCTGTGATTCCTGATCTC+AGG | 0.446347 | 7.4:+84391072 | MS.gene069412:CDS |
| TCTGAACTTAGGATCATATT+CGG | 0.456601 | 7.4:+84391980 | MS.gene069412:CDS |
| GCAACCTGCTTATCCAGAAT+AGG | 0.463293 | 7.4:+84390889 | MS.gene069412:CDS |
| CTGTTATCATCTTCGGTACC+CGG | 0.467583 | 7.4:-84391788 | None:intergenic |
| AGAATTCGTATCAATTTCTC+GGG | 0.468076 | 7.4:-84391446 | None:intergenic |
| ACATGGCTGAAAAGGTTAAA+GGG | 0.470527 | 7.4:+84391957 | MS.gene069412:CDS |
| TCGGTACCCGGACTCGTGTC+AGG | 0.474489 | 7.4:-84391776 | None:intergenic |
| AATGGATCCGAAAACACAAC+TGG | 0.475821 | 7.4:+84392008 | MS.gene069412:CDS |
| AAGCTTCTACCTCGGCTTCG+AGG | 0.476916 | 7.4:+84392162 | MS.gene069412:CDS |
| CACGAGGTTCTGAACAGATT+GGG | 0.480214 | 7.4:+84391557 | MS.gene069412:CDS |
| CCGTCAACAACGCCTTTAGT+TGG | 0.482370 | 7.4:+84391632 | MS.gene069412:CDS |
| TCCTGGTAGATTTCCCTCAA+TGG | 0.483428 | 7.4:+84391823 | MS.gene069412:CDS |
| GCGCATATTGATCGAGAAGT+TGG | 0.488485 | 7.4:+84390767 | MS.gene069412:CDS |
| CAATGCTTTGTATTCGGACG+AGG | 0.488922 | 7.4:+84391508 | MS.gene069412:CDS |
| AGATGTCTTGAAAATGGAAT+GGG | 0.491461 | 7.4:+84391220 | MS.gene069412:CDS |
| GATATGTTATGAATTATCTT+CGG | 0.492481 | 7.4:+84391678 | MS.gene069412:CDS |
| GAGACATACTCAGGTTCAAA+AGG | 0.492494 | 7.4:-84390915 | None:intergenic |
| TGTTCATTCTTGAAATGGAA+AGG | 0.497581 | 7.4:+84391186 | MS.gene069412:CDS |
| CCAACTAAAGGCGTTGTTGA+CGG | 0.497916 | 7.4:-84391632 | None:intergenic |
| GTTGCCTATTCTGGATAAGC+AGG | 0.498736 | 7.4:-84390893 | None:intergenic |
| CTTATAGGACATTTGTTGGA+AGG | 0.502026 | 7.4:+84392275 | MS.gene069412:CDS |
| CCACGAGGTTCTGAACAGAT+TGG | 0.503504 | 7.4:+84391556 | MS.gene069412:CDS |
| AGGAATTGCCGCGCCATTGA+GGG | 0.506822 | 7.4:-84391836 | None:intergenic |
| TTTACAGGATTCAAACAGCT+TGG | 0.507788 | 7.4:+84392188 | MS.gene069412:CDS |
| TTTGCGATACACCTGAGATC+AGG | 0.508198 | 7.4:-84391083 | None:intergenic |
| ATCAATTTCTCGGGTTGGTG+AGG | 0.514697 | 7.4:-84391437 | None:intergenic |
| AGGTTAAAGGGTCTGAACTT+AGG | 0.515044 | 7.4:+84391969 | MS.gene069412:CDS |
| TGTATCCCTCCACCAACTAA+AGG | 0.515506 | 7.4:-84391644 | None:intergenic |
| GGGTTTATCTTGCAAGTGAA+AGG | 0.515546 | 7.4:+84391297 | MS.gene069412:CDS |
| TCAACAACGCCTTTAGTTGG+TGG | 0.518800 | 7.4:+84391635 | MS.gene069412:CDS |
| AACAGAAGCCAAGCATCTCC+TGG | 0.521198 | 7.4:+84391806 | MS.gene069412:CDS |
| TCGTCACCTGACACGAGTCC+GGG | 0.521282 | 7.4:+84391770 | MS.gene069412:CDS |
| AGCTTATACCATTGTTAGAA+GGG | 0.522929 | 7.4:+84391145 | MS.gene069412:CDS |
| AATGAACAACCTACATTACA+TGG | 0.524061 | 7.4:+84391940 | MS.gene069412:CDS |
| GAAATCTACCAGGAGATGCT+TGG | 0.524343 | 7.4:-84391814 | None:intergenic |
| TGGTTTCAAAGATCAAAAGA+TGG | 0.529315 | 7.4:+84391249 | MS.gene069412:CDS |
| AAGATGTCTTGAAAATGGAA+TGG | 0.530741 | 7.4:+84391219 | MS.gene069412:CDS |
| GGCTTATAGTGTTCTTCAGA+CGG | 0.538239 | 7.4:+84390839 | MS.gene069412:CDS |
| TCTGAAAGATCAAGAAGAAG+AGG | 0.540005 | 7.4:+84391736 | MS.gene069412:CDS |
| GAATACAAAGCATTGATGTC+AGG | 0.541545 | 7.4:-84391500 | None:intergenic |
| ACAACGCCTTTAGTTGGTGG+AGG | 0.547732 | 7.4:+84391638 | MS.gene069412:CDS |
| TTTGAGACAGAATTTGAACC+AGG | 0.551804 | 7.4:-84392115 | None:intergenic |
| TGAAATACGAGAGAGCTAGT+TGG | 0.555215 | 7.4:+84392050 | MS.gene069412:CDS |
| TTCATAACATATCTCGCCAA+TGG | 0.563562 | 7.4:-84391668 | None:intergenic |
| GCCATTGAGGGAAATCTACC+AGG | 0.565256 | 7.4:-84391824 | None:intergenic |
| GGATCATATTCGGAGACGAA+TGG | 0.566493 | 7.4:+84391990 | MS.gene069412:CDS |
| GATGAAGGAATTCACGCTCC+TGG | 0.569538 | 7.4:+84392097 | MS.gene069412:CDS |
| TTCTTCAGACGGCTATGACA+CGG | 0.570975 | 7.4:+84390850 | MS.gene069412:CDS |
| TAGGAATTGCCGCGCCATTG+AGG | 0.571255 | 7.4:-84391837 | None:intergenic |
| AAGTTACGAAGCTTCTACCT+CGG | 0.578858 | 7.4:+84392154 | MS.gene069412:CDS |
| TGTAAATATCCTCGAAGCCG+AGG | 0.581914 | 7.4:-84392171 | None:intergenic |
| GCTTTGTATTCGGACGAGGT+TGG | 0.582361 | 7.4:+84391512 | MS.gene069412:CDS |
| GCGAGGAAGATGTTGTTGAT+GGG | 0.586419 | 7.4:+84390949 | MS.gene069412:CDS |
| TGGTGGAGGGATACATCCAT+TGG | 0.593262 | 7.4:+84391652 | MS.gene069412:CDS |
| CAACGCCTTTAGTTGGTGGA+GGG | 0.597098 | 7.4:+84391639 | MS.gene069412:CDS |
| GATCGAAACGAGACATACTC+AGG | 0.599078 | 7.4:-84390924 | None:intergenic |
| CTGAGATCAGGAATCACAGC+CGG | 0.603127 | 7.4:-84391071 | None:intergenic |
| TTTATCTTGCAAGTGAAAGG+TGG | 0.606242 | 7.4:+84391300 | MS.gene069412:CDS |
| ATCAATGACATGCTCTTCAG+TGG | 0.607832 | 7.4:-84391039 | None:intergenic |
| TAAGGCATCCCTTCTAACAA+TGG | 0.621969 | 7.4:-84391153 | None:intergenic |
| ATATTGATCGAGAAGTTGGA+AGG | 0.643451 | 7.4:+84390771 | MS.gene069412:CDS |
| TGTCTCGTTTCGATCGAGCG+AGG | 0.647882 | 7.4:+84390932 | MS.gene069412:CDS |
| GTAGATTTCCCTCAATGGCG+CGG | 0.659563 | 7.4:+84391828 | MS.gene069412:CDS |
| AGTCTTGGAGAACAATCTCG+AGG | 0.679517 | 7.4:+84391871 | MS.gene069412:CDS |
| GGTTCACTTTGAATGCCACG+AGG | 0.713802 | 7.4:+84391541 | MS.gene069412:CDS |
| CCAATCTGTTCAGAACCTCG+TGG | 0.714380 | 7.4:-84391556 | None:intergenic |
| GATGTCTTGAAAATGGAATG+GGG | 0.730786 | 7.4:+84391221 | MS.gene069412:CDS |
| GTGGCATTCAAAGTGAACCG+AGG | 0.739746 | 7.4:-84391537 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTAGAAAATTATCTTT+TGG | + | chr7.4:84392342-84392361 | MS.gene069412:CDS | 15.0% |
| !! | GATATGTTATGAATTATCTT+CGG | + | chr7.4:84391678-84391697 | MS.gene069412:CDS | 20.0% |
| ! | TATTGAAGATGTCTTGAAAA+TGG | + | chr7.4:84391214-84391233 | MS.gene069412:CDS | 25.0% |
| ! | TTAAAGTGATTCAAGCTTAT+AGG | + | chr7.4:84392260-84392279 | MS.gene069412:CDS | 25.0% |
| !! | AAAGATCAAAAGATGGATTT+GGG | + | chr7.4:84391256-84391275 | MS.gene069412:CDS | 25.0% |
| !! | TATCTTTTGGATTTCTTTGA+AGG | + | chr7.4:84392355-84392374 | MS.gene069412:CDS | 25.0% |
| AAGATGTCTTGAAAATGGAA+TGG | + | chr7.4:84391219-84391238 | MS.gene069412:CDS | 30.0% | |
| AAGCTTATACCATTGTTAGA+AGG | + | chr7.4:84391144-84391163 | MS.gene069412:CDS | 30.0% | |
| AATGAACAAACACTCATCTA+AGG | - | chr7.4:84391174-84391193 | None:intergenic | 30.0% | |
| AATGAACAACCTACATTACA+TGG | + | chr7.4:84391940-84391959 | MS.gene069412:CDS | 30.0% | |
| AGAATTCGTATCAATTTCTC+GGG | - | chr7.4:84391449-84391468 | None:intergenic | 30.0% | |
| AGATGTCTTGAAAATGGAAT+GGG | + | chr7.4:84391220-84391239 | MS.gene069412:CDS | 30.0% | |
| AGATTTGCGGATTTCTATAT+CGG | + | chr7.4:84392237-84392256 | MS.gene069412:CDS | 30.0% | |
| AGCTTATACCATTGTTAGAA+GGG | + | chr7.4:84391145-84391164 | MS.gene069412:CDS | 30.0% | |
| AGTTGTTGCAAAATCCTATT+AGG | + | chr7.4:84392386-84392405 | MS.gene069412:CDS | 30.0% | |
| ATCCTTAAGAAAGTTGAGAA+TGG | - | chr7.4:84392080-84392099 | None:intergenic | 30.0% | |
| GAGAATTCGTATCAATTTCT+CGG | - | chr7.4:84391450-84391469 | None:intergenic | 30.0% | |
| GTGTTTGTTCATTCTTGAAA+TGG | + | chr7.4:84391181-84391200 | MS.gene069412:CDS | 30.0% | |
| TCTGAACTTAGGATCATATT+CGG | + | chr7.4:84391980-84391999 | MS.gene069412:CDS | 30.0% | |
| TGACATCAATGCTTTGTATT+CGG | + | chr7.4:84391502-84391521 | MS.gene069412:CDS | 30.0% | |
| TGGTTTCAAAGATCAAAAGA+TGG | + | chr7.4:84391249-84391268 | MS.gene069412:CDS | 30.0% | |
| TGTCTCAAAAACTCTTCTAA+AGG | + | chr7.4:84392129-84392148 | MS.gene069412:CDS | 30.0% | |
| TGTTCATTCTTGAAATGGAA+AGG | + | chr7.4:84391186-84391205 | MS.gene069412:CDS | 30.0% | |
| TTCCATTCTCAACTTTCTTA+AGG | + | chr7.4:84392075-84392094 | MS.gene069412:CDS | 30.0% | |
| ! | AGAGTATAAGTTTTTGCAGA+GGG | + | chr7.4:84390818-84390837 | MS.gene069412:CDS | 30.0% |
| ! | ATTTTGCAGCTTCTGAATTT+TGG | + | chr7.4:84391395-84391414 | MS.gene069412:CDS | 30.0% |
| ! | CAAAGATCAAAAGATGGATT+TGG | + | chr7.4:84391255-84391274 | MS.gene069412:CDS | 30.0% |
| !! | AAGAGTATAAGTTTTTGCAG+AGG | + | chr7.4:84390817-84390836 | MS.gene069412:CDS | 30.0% |
| !! | GGCTTTGAAAATCTTTGTTA+GGG | + | chr7.4:84391277-84391296 | MS.gene069412:CDS | 30.0% |
| !! | TGTCATTGATTTAGTTCATC+CGG | + | chr7.4:84391052-84391071 | MS.gene069412:CDS | 30.0% |
| !!! | TTTTGGTGATGATTCATTTG+AGG | + | chr7.4:84390986-84391005 | MS.gene069412:CDS | 30.0% |
| AAATACTCAGACGTTTCTTC+AGG | - | chr7.4:84390729-84390748 | None:intergenic | 35.0% | |
| ACAAAACAAGCTTGACTAAC+AGG | - | chr7.4:84391356-84391375 | None:intergenic | 35.0% | |
| ACATGGCTGAAAAGGTTAAA+GGG | + | chr7.4:84391957-84391976 | MS.gene069412:CDS | 35.0% | |
| ATATTGATCGAGAAGTTGGA+AGG | + | chr7.4:84390771-84390790 | MS.gene069412:CDS | 35.0% | |
| CAAGCTTATAGGACATTTGT+TGG | + | chr7.4:84392271-84392290 | MS.gene069412:CDS | 35.0% | |
| CTCAACTTTCTTAAGGATGA+AGG | + | chr7.4:84392082-84392101 | MS.gene069412:CDS | 35.0% | |
| GATGTCTTGAAAATGGAATG+GGG | + | chr7.4:84391221-84391240 | MS.gene069412:CDS | 35.0% | |
| TACATGGCTGAAAAGGTTAA+AGG | + | chr7.4:84391956-84391975 | MS.gene069412:CDS | 35.0% | |
| TCTGAAAGATCAAGAAGAAG+AGG | + | chr7.4:84391736-84391755 | MS.gene069412:CDS | 35.0% | |
| TTCATAACATATCTCGCCAA+TGG | - | chr7.4:84391671-84391690 | None:intergenic | 35.0% | |
| TTGGCTTCTGTTATCATCTT+CGG | - | chr7.4:84391798-84391817 | None:intergenic | 35.0% | |
| TTTACAGGATTCAAACAGCT+TGG | + | chr7.4:84392188-84392207 | MS.gene069412:CDS | 35.0% | |
| TTTATCTTGCAAGTGAAAGG+TGG | + | chr7.4:84391300-84391319 | MS.gene069412:CDS | 35.0% | |
| TTTGGTGAAGCTATGTCTAT+TGG | + | chr7.4:84391413-84391432 | MS.gene069412:CDS | 35.0% | |
| ! | CTTATAGGACATTTGTTGGA+AGG | + | chr7.4:84392275-84392294 | MS.gene069412:CDS | 35.0% |
| ! | GAAACTTCCAGTTGTGTTTT+CGG | - | chr7.4:84392018-84392037 | None:intergenic | 35.0% |
| ! | GGGAATTCTTTTGTCTCTTT+TGG | + | chr7.4:84390969-84390988 | MS.gene069412:CDS | 35.0% |
| ! | TGGCTTAGTGACCAAATTTT+CGG | + | chr7.4:84391320-84391339 | MS.gene069412:CDS | 35.0% |
| ! | TTTGAGACAGAATTTGAACC+AGG | - | chr7.4:84392118-84392137 | None:intergenic | 35.0% |
| !! | GAATACAAAGCATTGATGTC+AGG | - | chr7.4:84391503-84391522 | None:intergenic | 35.0% |
| !! | GGGCTTTGAAAATCTTTGTT+AGG | + | chr7.4:84391276-84391295 | MS.gene069412:CDS | 35.0% |
| AAGTTACGAAGCTTCTACCT+CGG | + | chr7.4:84392154-84392173 | MS.gene069412:CDS | 40.0% | |
| AATGGATCCGAAAACACAAC+TGG | + | chr7.4:84392008-84392027 | MS.gene069412:CDS | 40.0% | |
| AGGTTAAAGGGTCTGAACTT+AGG | + | chr7.4:84391969-84391988 | MS.gene069412:CDS | 40.0% | |
| ATCAATGACATGCTCTTCAG+TGG | - | chr7.4:84391042-84391061 | None:intergenic | 40.0% | |
| ATTCAGTGCTTCGCTGTAAT+CGG | - | chr7.4:84391711-84391730 | None:intergenic | 40.0% | |
| CCAAGACTGAAGCAAATGAT+AGG | - | chr7.4:84391859-84391878 | None:intergenic | 40.0% | |
| CCTACATTACATGGCTGAAA+AGG | + | chr7.4:84391949-84391968 | MS.gene069412:CDS | 40.0% | |
| CCTATCATTTGCTTCAGTCT+TGG | + | chr7.4:84391856-84391875 | MS.gene069412:CDS | 40.0% | |
| GAGACATACTCAGGTTCAAA+AGG | - | chr7.4:84390918-84390937 | None:intergenic | 40.0% | |
| GGCTTATAGTGTTCTTCAGA+CGG | + | chr7.4:84390839-84390858 | MS.gene069412:CDS | 40.0% | |
| GGGTTTATCTTGCAAGTGAA+AGG | + | chr7.4:84391297-84391316 | MS.gene069412:CDS | 40.0% | |
| GTTCAAAAGGTTGCCTATTC+TGG | - | chr7.4:84390905-84390924 | None:intergenic | 40.0% | |
| TGAAATACGAGAGAGCTAGT+TGG | + | chr7.4:84392050-84392069 | MS.gene069412:CDS | 40.0% | |
| TTCGTATCAATTTCTCGGGT+TGG | - | chr7.4:84391445-84391464 | None:intergenic | 40.0% | |
| ! | AGTGACCAAATTTTCGGAGA+AGG | + | chr7.4:84391326-84391345 | MS.gene069412:CDS | 40.0% |
| ! | CCTTTTCAGCCATGTAATGT+AGG | - | chr7.4:84391952-84391971 | None:intergenic | 40.0% |
| ! | GAAAATGGAATGGGGTACTT+TGG | + | chr7.4:84391229-84391248 | MS.gene069412:CDS | 40.0% |
| ! | TAAGGCATCCCTTCTAACAA+TGG | - | chr7.4:84391156-84391175 | None:intergenic | 40.0% |
| AGCGAGGAAGATGTTGTTGA+TGG | + | chr7.4:84390948-84390967 | MS.gene069412:CDS | 45.0% | |
| AGTCTTGGAGAACAATCTCG+AGG | + | chr7.4:84391871-84391890 | MS.gene069412:CDS | 45.0% | |
| CAATGCTTTGTATTCGGACG+AGG | + | chr7.4:84391508-84391527 | MS.gene069412:CDS | 45.0% | |
| CTGTTATCATCTTCGGTACC+CGG | - | chr7.4:84391791-84391810 | None:intergenic | 45.0% | |
| GAAATCTACCAGGAGATGCT+TGG | - | chr7.4:84391817-84391836 | None:intergenic | 45.0% | |
| GATCGAAACGAGACATACTC+AGG | - | chr7.4:84390927-84390946 | None:intergenic | 45.0% | |
| GCAACCTGCTTATCCAGAAT+AGG | + | chr7.4:84390889-84390908 | MS.gene069412:CDS | 45.0% | |
| GCGAGGAAGATGTTGTTGAT+GGG | + | chr7.4:84390949-84390968 | MS.gene069412:CDS | 45.0% | |
| GCGCATATTGATCGAGAAGT+TGG | + | chr7.4:84390767-84390786 | MS.gene069412:CDS | 45.0% | |
| GGATCATATTCGGAGACGAA+TGG | + | chr7.4:84391990-84392009 | MS.gene069412:CDS | 45.0% | |
| GTTCGCCTTCTCCGAAAATT+TGG | - | chr7.4:84391334-84391353 | None:intergenic | 45.0% | |
| GTTGCCTATTCTGGATAAGC+AGG | - | chr7.4:84390896-84390915 | None:intergenic | 45.0% | |
| TCAACAACGCCTTTAGTTGG+TGG | + | chr7.4:84391635-84391654 | MS.gene069412:CDS | 45.0% | |
| TCCTGGTAGATTTCCCTCAA+TGG | + | chr7.4:84391823-84391842 | MS.gene069412:CDS | 45.0% | |
| TCGGCTTCGAGGATATTTAC+AGG | + | chr7.4:84392173-84392192 | MS.gene069412:CDS | 45.0% | |
| TGTAAATATCCTCGAAGCCG+AGG | - | chr7.4:84392174-84392193 | None:intergenic | 45.0% | |
| TGTATCCCTCCACCAACTAA+AGG | - | chr7.4:84391647-84391666 | None:intergenic | 45.0% | |
| TTCAGCTTCGCGAAGATTTG+CGG | + | chr7.4:84392224-84392243 | MS.gene069412:CDS | 45.0% | |
| TTCTTCAGACGGCTATGACA+CGG | + | chr7.4:84390850-84390869 | MS.gene069412:CDS | 45.0% | |
| TTTGCGATACACCTGAGATC+AGG | - | chr7.4:84391086-84391105 | None:intergenic | 45.0% | |
| !! | ATCAATTTCTCGGGTTGGTG+AGG | - | chr7.4:84391440-84391459 | None:intergenic | 45.0% |
| !! | CACGAGGTTCTGAACAGATT+GGG | + | chr7.4:84391557-84391576 | MS.gene069412:CDS | 45.0% |
| !! | CCAACTAAAGGCGTTGTTGA+CGG | - | chr7.4:84391635-84391654 | None:intergenic | 45.0% |
| AACAGAAGCCAAGCATCTCC+TGG | + | chr7.4:84391806-84391825 | MS.gene069412:CDS | 50.0% | |
| CCAATCTGTTCAGAACCTCG+TGG | - | chr7.4:84391559-84391578 | None:intergenic | 50.0% | |
| CCGTCAACAACGCCTTTAGT+TGG | + | chr7.4:84391632-84391651 | MS.gene069412:CDS | 50.0% | |
| CGTGTCAGGTGACGATGAAA+TGG | - | chr7.4:84391765-84391784 | None:intergenic | 50.0% | |
| CTGAGATCAGGAATCACAGC+CGG | - | chr7.4:84391074-84391093 | None:intergenic | 50.0% | |
| GATGAAGGAATTCACGCTCC+TGG | + | chr7.4:84392097-84392116 | MS.gene069412:CDS | 50.0% | |
| GCCATTGAGGGAAATCTACC+AGG | - | chr7.4:84391827-84391846 | None:intergenic | 50.0% | |
| GCTTTGTATTCGGACGAGGT+TGG | + | chr7.4:84391512-84391531 | MS.gene069412:CDS | 50.0% | |
| GGTTCACTTTGAATGCCACG+AGG | + | chr7.4:84391541-84391560 | MS.gene069412:CDS | 50.0% | |
| GTAGATTTCCCTCAATGGCG+CGG | + | chr7.4:84391828-84391847 | MS.gene069412:CDS | 50.0% | |
| GTGGCATTCAAAGTGAACCG+AGG | - | chr7.4:84391540-84391559 | None:intergenic | 50.0% | |
| TCTTCGCGAAGCTGAACATC+TGG | - | chr7.4:84392220-84392239 | None:intergenic | 50.0% | |
| TGGTGGAGGGATACATCCAT+TGG | + | chr7.4:84391652-84391671 | MS.gene069412:CDS | 50.0% | |
| !! | ACAACGCCTTTAGTTGGTGG+AGG | + | chr7.4:84391638-84391657 | MS.gene069412:CDS | 50.0% |
| !! | CAACGCCTTTAGTTGGTGGA+GGG | + | chr7.4:84391639-84391658 | MS.gene069412:CDS | 50.0% |
| !! | CCACGAGGTTCTGAACAGAT+TGG | + | chr7.4:84391556-84391575 | MS.gene069412:CDS | 50.0% |
| AAGCTTCTACCTCGGCTTCG+AGG | + | chr7.4:84392162-84392181 | MS.gene069412:CDS | 55.0% | |
| AGGAATTGCCGCGCCATTGA+GGG | - | chr7.4:84391839-84391858 | None:intergenic | 55.0% | |
| ATCGTCACCTGACACGAGTC+CGG | + | chr7.4:84391769-84391788 | MS.gene069412:CDS | 55.0% | |
| CGGCTGTGATTCCTGATCTC+AGG | + | chr7.4:84391072-84391091 | MS.gene069412:CDS | 55.0% | |
| TAGGAATTGCCGCGCCATTG+AGG | - | chr7.4:84391840-84391859 | None:intergenic | 55.0% | |
| TGTCTCGTTTCGATCGAGCG+AGG | + | chr7.4:84390932-84390951 | MS.gene069412:CDS | 55.0% | |
| ! | TTCGGACGAGGTTGGTTCCT+CGG | + | chr7.4:84391520-84391539 | MS.gene069412:CDS | 55.0% |
| TCGTCACCTGACACGAGTCC+GGG | + | chr7.4:84391770-84391789 | MS.gene069412:CDS | 60.0% | |
| TCGGTACCCGGACTCGTGTC+AGG | - | chr7.4:84391779-84391798 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 84390708 | 84392414 | 84390708 | ID=MS.gene069412 |
| chr7.4 | mRNA | 84390708 | 84392414 | 84390708 | ID=MS.gene069412.t1;Parent=MS.gene069412 |
| chr7.4 | exon | 84390708 | 84392414 | 84390708 | ID=MS.gene069412.t1.exon1;Parent=MS.gene069412.t1 |
| chr7.4 | CDS | 84390708 | 84392414 | 84390708 | ID=cds.MS.gene069412.t1;Parent=MS.gene069412.t1 |
| Gene Sequence |
| Protein sequence |
